15-31320640-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320640
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320640
    reference: chr 15
allele count: 2
allele frequency: 1.656561640658649e-5
allele num: 120732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3122G>A
  hgvsp: ENSP00000380897.2:p.Arg1041Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2894G>A
  hgvsp: ENSP00000453119.1:p.Arg965Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3188G>A
  hgvsp: ENSP00000256552.6:p.Arg1063Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.563G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.411G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2074G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3239G>A
  hgvsp: ENSP00000437849.1:p.Arg1080Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.467G>A
  hgvsp: ENSP00000453477.1:p.Arg156Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3122G>A
  hgvsp: ENSP00000452946.1:p.Arg1041Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7316C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1326C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13859
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6114
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1080Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

15-31320641-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320641
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320641
    reference: chr 15
allele count: 11
allele frequency: 9.111089023622569e-5
allele num: 120732
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3238C>T
  hgvsp: ENSP00000437849.1:p.Arg1080Trp
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3121C>T
  hgvsp: ENSP00000380897.2:p.Arg1041Trp
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2893C>T
  hgvsp: ENSP00000453119.1:p.Arg965Trp
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3187C>T
  hgvsp: ENSP00000256552.6:p.Arg1063Trp
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2073C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3121C>T
  hgvsp: ENSP00000452946.1:p.Arg1041Trp
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1327G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.466C>T
  hgvsp: ENSP00000453477.1:p.Arg156Trp
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7315G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.562C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.410C>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1080Trp
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

15-31320641-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320641
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320641
    reference: chr 15
allele count: 8
allele frequency: 6.626246562634596e-5
allele num: 120732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3187C>A
  hgvsp: ENST00000256552.6:c.3187C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3238C>A
  hgvsp: ENST00000542188.1:c.3238C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.562C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.466C>A
  hgvsp: ENST00000559177.1:c.466C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3121C>A
  hgvsp: ENST00000397795.2:c.3121C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2073C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1327G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7315G>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3121C>A
  hgvsp: ENST00000558445.1:c.3121C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.410C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2893C>A
  hgvsp: ENST00000558768.1:c.2893C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13857
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1080Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-31320651-CTCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320651
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320648
    reference: chr 15
allele count: 1
allele frequency: 8.284043275842073e-6
allele num: 120714
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1342_260+1344delCAT
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3225_3227delTGA
  hgvsp: ENSP00000437849.1:p.Asp1075del
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.549_551delTGA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2060_*2062delTGA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2880_2882delTGA
  hgvsp: ENSP00000453119.1:p.Asp960del
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3108_3110delTGA
  hgvsp: ENSP00000452946.1:p.Asp1036del
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.397_399delTGA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3174_3176delTGA
  hgvsp: ENSP00000256552.6:p.Asp1058del
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.453_455delTGA
  hgvsp: ENSP00000453477.1:p.Asp151del
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7300_19-7298delCAT
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3108_3110delTGA
  hgvsp: ENSP00000380897.2:p.Asp1036del
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19215
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp1075del
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: CTCA
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

15-31320654-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320654
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320654
    reference: chr 15
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.453T>C
  hgvsp: ENST00000559177.1:c.453T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.397T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2880T>C
  hgvsp: ENST00000558768.1:c.2880T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3174T>C
  hgvsp: ENST00000256552.6:c.3174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3108T>C
  hgvsp: ENST00000397795.2:c.3108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3225T>C
  hgvsp: ENST00000542188.1:c.3225T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2060T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.549T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3108T>C
  hgvsp: ENST00000558445.1:c.3108T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1340A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7302A>G
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp1075Asp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

15-31320686-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320686
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320687
    reference: chr 15
allele count: 2
allele frequency: 1.660715768496222e-5
allele num: 120430
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-8dupT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7263dupA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.524-8dupT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2035-8dupT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3083-8dupT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3149-8dupT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.372-8dupT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3083-8dupT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2855-8dupT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3200-8dupT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1379dupA
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6041
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13688
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.3200-8dupT
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

15-31320687-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320687
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320687
    reference: chr 15
allele count: 1
allele frequency: 8.303992559622666e-6
allele num: 120424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2855-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1373A>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3083-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3083-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2035-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3200-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.524-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7269A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.372-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3149-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-8T>C
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.3200-8T>C
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

15-31320694-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320694
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320694
    reference: chr 15
allele count: 8
allele frequency: 6.659341391136417e-5
allele num: 120132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2855-15A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7262T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3083-15A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.372-15A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3083-15A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1380T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3200-15A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.524-15A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2035-15A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-15A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3149-15A>G
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14639
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

15-31320703-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320703
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320703
    reference: chr 15
allele count: 14318
allele frequency: 1.198199102898842e-1
allele num: 119496
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2035-24G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1389C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.524-24G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3200-24G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7253C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3149-24G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3083-24G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.372-24G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3083-24G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2855-24G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-24G>C
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17348
  bin: 2.75e1
  variant carriers: 734
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 4.25e1
  variant carriers: 1613
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 8.25e1
  variant carriers: 235
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 9.25e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 12398
  bin: 3.25e1
  variant carriers: 1116
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 5.75e1
  variant carriers: 1180
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 6.75e1
  variant carriers: 560
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 1.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 1.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.25e1
  variant carriers: 423
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 4.75e1
  variant carriers: 1589
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.75e1
  variant carriers: 262
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 6.25e1
  variant carriers: 782
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 5.25e1
  variant carriers: 1400
genotype depth: GenotypeDepth
  all individuals: 5347
  bin: 3.75e1
  variant carriers: 1422
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 9.75e1
  variant carriers: 904
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 2.25e1
  variant carriers: 433
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 8.25e1
  variant carriers: 25
num of homozygotes: 1042
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

15-31320713-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320713
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320713
    reference: chr 15
allele count: 5
allele frequency: 4.216207100092756e-5
allele num: 118590
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3083-34A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7243T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.524-34A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3149-34A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.372-34A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1399T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3083-34A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2855-34A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-34A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2035-34A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3200-34A>G
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18560
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4719
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6893
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

15-31320716-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320716
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320716
    reference: chr 15
allele count: 1
allele frequency: 8.452656669991378e-6
allele num: 118306
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2855-37T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-37T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3149-37T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7240A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3083-37T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.524-37T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3200-37T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.372-37T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2035-37T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3083-37T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1402A>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4533
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6608
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6320
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

15-31320719-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31320719
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31320719
    reference: chr 15
allele count: 1
allele frequency: 8.466110161025414e-6
allele num: 118118
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3083-40A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-40A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3149-40A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.524-40A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-7237T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2035-40A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2855-40A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.372-40A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3083-40A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+1405T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3200-40A>G
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10658
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD

15-31321523-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321523
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321523
    reference: chr 15
allele count: 1
allele frequency: 8.311861025683651e-6
allele num: 120310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2034+51T>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.523+51T>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3199+51T>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3082+51T>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6433A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3148+51T>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.371+51T>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2209A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2854+51T>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3082+51T>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-844T>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7656
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS

15-31321540-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321540
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321540
    reference: chr 15
allele count: 3
allele frequency: 2.494595044071179e-5
allele num: 120260
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2226A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3082+34T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2034+34T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3199+34T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6416A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.371+34T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2854+34T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3148+34T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3082+34T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.523+34T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-861T>C
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22394
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12995
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

15-31321551-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321551
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321551
    reference: chr 15
allele count: 1
allele frequency: 8.318637074501714e-6
allele num: 120212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6405T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3082+23A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.371+23A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3199+23A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2854+23A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.523+23A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-872A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3148+23A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2237T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3082+23A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2034+23A>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/15-31321556-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321556
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321556
    reference: chr 15
allele count: 1
allele frequency: 8.32251406504877e-6
allele num: 120156
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2242A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3148+18T>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2854+18T>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-877T>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3082+18T>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.371+18T>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6400A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3199+18T>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.523+18T>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3082+18T>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2034+18T>G
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8325
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3339
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

15-31321563-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321563
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321563
    reference: chr 15
allele count: 1
allele frequency: 8.327226700419692e-6
allele num: 120088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6393T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3199+11A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2854+11A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.371+11A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3148+11A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2034+11A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.523+11A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2249T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3082+11A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3082+11A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-884A>G
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 22374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

15-31321568-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321568
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321568
    reference: chr 15
allele count: 1
allele frequency: 8.331944675887353e-6
allele num: 120020
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.371+6T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.523+6T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3082+6T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3199+6T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-889T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2854+6T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3148+6T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2034+6T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3082+6T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6388A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2254A>G
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.3199+6T>C
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

15-31321573-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321573
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321573
    reference: chr 15
allele count: 2
allele frequency: 1.667444807576869e-5
allele num: 119944
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2259C>T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.523+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-894G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2854+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3199+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2034+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6383C>T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3082+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3148+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.371+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3082+1G>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.25e1
  variant carriers: 0
hgvs: c.3199+1G>A
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-31321574-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321574
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321574
    reference: chr 15
allele count: 9
allele frequency: 7.504627853843204e-5
allele num: 119926
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6382G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3199C>T
  hgvsp: ENSP00000437849.1:p.Pro1067Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3082C>T
  hgvsp: ENSP00000452946.1:p.Pro1028Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.371C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2034C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2854C>T
  hgvsp: ENSP00000453119.1:p.Pro952Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3148C>T
  hgvsp: ENSP00000256552.6:p.Pro1050Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3082C>T
  hgvsp: ENSP00000380897.2:p.Pro1028Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.523C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-895C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2260G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22173
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12864
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro1067Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

15-31321580-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321580
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321580
    reference: chr 15
allele count: 2
allele frequency: 1.668836153666433e-5
allele num: 119844
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3142A>G
  hgvsp: ENSP00000256552.6:p.Ile1048Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.365A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2266T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-901A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3076A>G
  hgvsp: ENSP00000452946.1:p.Ile1026Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3193A>G
  hgvsp: ENSP00000437849.1:p.Ile1065Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3076A>G
  hgvsp: ENSP00000380897.2:p.Ile1026Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2028A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2848A>G
  hgvsp: ENSP00000453119.1:p.Ile950Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6376T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.517A>G
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile1065Val
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/15-31321589-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321589
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321589
    reference: chr 15
allele count: 1
allele frequency: 8.358827757995218e-6
allele num: 119634
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.508G>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3067G>T
  hgvsp: ENSP00000380897.2:p.Ala1023Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-910G>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2019G>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3184G>T
  hgvsp: ENSP00000437849.1:p.Ala1062Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3133G>T
  hgvsp: ENSP00000256552.6:p.Ala1045Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6367C>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2275C>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3067G>T
  hgvsp: ENSP00000452946.1:p.Ala1023Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2839G>T
  hgvsp: ENSP00000453119.1:p.Ala947Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.356G>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala1062Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

15-31321590-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321590
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321590
    reference: chr 15
allele count: 9
allele frequency: 7.525712852245172e-5
allele num: 119590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3066C>T
  hgvsp: ENST00000397795.2:c.3066C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3132C>T
  hgvsp: ENST00000256552.6:c.3132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-911C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2276G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3066C>T
  hgvsp: ENST00000558445.1:c.3066C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6366G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.507C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3183C>T
  hgvsp: ENST00000542188.1:c.3183C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2838C>T
  hgvsp: ENST00000558768.1:c.2838C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.355C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2018C>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21776
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12677
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Tyr1061Tyr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

15-31321602-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321602
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321602
    reference: chr 15
allele count: 2
allele frequency: 1.679204728640516e-5
allele num: 119104
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3179-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6354A>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3062-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-923T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3128-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3062-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.351-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2288A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.503-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2834-8T>C
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.3179-8T>C
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

15-31321603-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321603
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321603
    reference: chr 15
allele count: 4
allele frequency: 3.359368438733518e-5
allele num: 119070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-9G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.503-9G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6353C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2834-9G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3179-9G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3062-9G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-924G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2289C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3062-9G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.351-9G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3128-9G>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21056
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3071
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

15-31321604-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321604
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321604
    reference: chr 15
allele count: 2
allele frequency: 1.680870018321483e-5
allele num: 118986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.351-10C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2834-10C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3062-10C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3179-10C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2290G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6352G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-925C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3062-10C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3128-10C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-10C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.503-10C>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12294
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/15-31321610-A-AACC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321610
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321613
    reference: chr 15
allele count: 1
allele frequency: 8.421478137842754e-6
allele num: 118744
alternate allele: AACC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-17_*2014-16insGGT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3179-17_3179-16insGGT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2834-17_2834-16insGGT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6345_19-6344insCCA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3128-17_3128-16insGGT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.503-17_503-16insGGT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.351-17_351-16insGGT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3062-17_3062-16insGGT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-932_428-931insGGT
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2297_260+2298insCCA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3062-17_3062-16insGGT
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11973
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10496
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3026
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

15-31321619-T-TTTTTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321619
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321624
    reference: chr 15
allele count: 4
allele frequency: 3.389256058295204e-5
allele num: 118020
alternate allele: TTTTTG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6321_19-6317dupTTTTG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3062-30_3062-26dupCAAAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-30_*2014-26dupCAAAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.503-30_503-26dupCAAAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.351-30_351-26dupCAAAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2321_260+2325dupTTTTG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3128-30_3128-26dupCAAAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3179-30_3179-26dupCAAAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2834-30_2834-26dupCAAAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3062-30_3062-26dupCAAAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-945_428-941dupCAAAA
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17554
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum

15-31321621-T-TTTGTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321621
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321626
    reference: chr 15
allele count: 2
allele frequency: 1.70465199529516e-5
allele num: 117326
alternate allele: TTTGTA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-28_*2014-27insTACAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2311_260+2312insATTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3128-28_3128-27insTACAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2834-28_2834-27insTACAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-943_428-942insTACAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6331_19-6330insATTGT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3179-28_3179-27insTACAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.503-28_503-27insTACAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3062-28_3062-27insTACAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3062-28_3062-27insTACAA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.351-28_351-27insTACAA
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9858
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14630
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10349
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

15-31321624-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321624
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321624
    reference: chr 15
allele count: 1
allele frequency: 8.536064874093044e-6
allele num: 117150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2834-30C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-945C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2310G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.503-30C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6332G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3062-30C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3128-30C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3179-30C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.351-30C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-30C>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3062-30C>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8128
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9852
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2826
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS

15-31321629-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321629
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321629
    reference: chr 15
allele count: 1
allele frequency: 8.536647829130458e-6
allele num: 117142
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3062-35C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3062-35C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6327G>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-35C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2834-35C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.503-35C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3179-35C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3128-35C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.351-35C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-950C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2315G>C
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9734
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

15-31321646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31321646
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31321646
    reference: chr 15
allele count: 1
allele frequency: 8.898063781321184e-6
allele num: 112384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2834-52C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3062-52C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.351-52C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+2332G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-6310G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-967C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3128-52C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.503-52C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3179-52C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3062-52C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-52C>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12772
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7960
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12020
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

15-31323144-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323144
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323144
    reference: chr 15
allele count: 1
allele frequency: 8.278968109414843e-6
allele num: 120788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.350+42G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.502+42G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1550G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3830C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2833+42G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4812C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3127+42G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3178+42G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2465G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3061+42G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3061+42G>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3602
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4906
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

15-31323167-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323167
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323167
    reference: chr 15
allele count: 4
allele frequency: 3.311313101210285e-5
allele num: 120798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2488G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3853C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.350+19G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.502+19G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2833+19G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3061+19G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1573G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4789C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3127+19G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3178+19G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3061+19G>C
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15194
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

15-31323168-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323168
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323168
    reference: chr 15
allele count: 2
allele frequency: 1.655656550605143e-5
allele num: 120798
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3178+18A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1574A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3061+18A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2489A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.350+18A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3854T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2833+18A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4788T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3061+18A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3127+18A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.502+18A>G
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9343
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

15-31323178-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323178
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323178
    reference: chr 15
allele count: 2
allele frequency: 1.655546909921693e-5
allele num: 120806
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3061+8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3127+8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3178+8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3061+8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3864A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.502+8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2499T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.350+8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2833+8T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4778A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1584T>C
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.3178+8T>C
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

15-31323185-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323185
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323185
    reference: chr 15
allele count: 7
allele frequency: 5.794126411283647e-5
allele num: 120812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1591G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2833+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3178+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3061+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.502+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3127+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3061+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.350+1G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4771C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3871C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2506G>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: c.3178+1G>A
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

15-31323186-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323186
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323186
    reference: chr 15
allele count: 7
allele frequency: 5.794030493154767e-5
allele num: 120814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1592C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3178C>T
  hgvsp: ENSP00000437849.1:p.Leu1060Phe
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3061C>T
  hgvsp: ENSP00000380897.2:p.Leu1021Phe
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3061C>T
  hgvsp: ENSP00000452946.1:p.Leu1021Phe
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.502C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4770G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2833C>T
  hgvsp: ENSP00000453119.1:p.Leu945Phe
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.350C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3127C>T
  hgvsp: ENSP00000256552.6:p.Leu1043Phe
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3872G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2507C>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15201
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu1060Phe
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

15-31323186-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323186
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323186
    reference: chr 15
allele count: 1
allele frequency: 8.277186418792524e-6
allele num: 120814
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.502C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.350C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4770G>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3872G>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3178C>G
  hgvsp: ENSP00000437849.1:p.Leu1060Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3127C>G
  hgvsp: ENSP00000256552.6:p.Leu1043Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3061C>G
  hgvsp: ENSP00000380897.2:p.Leu1021Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2833C>G
  hgvsp: ENSP00000453119.1:p.Leu945Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3061C>G
  hgvsp: ENSP00000452946.1:p.Leu1021Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1592C>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2507C>G
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu1060Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

15-31323189-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323189
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323188
    reference: chr 15
allele count: 1
allele frequency: 8.276638360563474e-6
allele num: 120822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.346delA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2829delA
  hgvsp: ENSP00000453119.1:p.Ile943MetfsTer50
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3174delA
  hgvsp: ENSP00000437849.1:p.Ile1058MetfsTer50
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3057delA
  hgvsp: ENSP00000380897.2:p.Ile1019MetfsTer50
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3057delA
  hgvsp: ENSP00000452946.1:p.Ile1019MetfsTer50
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1596delA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.498delA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3123delA
  hgvsp: ENSP00000256552.6:p.Ile1041MetfsTer50
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2511delA
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4766delT
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3876delT
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile1058MetfsTer50
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: CT
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-31323201-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323201
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323201
    reference: chr 15
allele count: 1
allele frequency: 8.276227364518158e-6
allele num: 120828
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3163G>A
  hgvsp: ENSP00000437849.1:p.Ala1055Thr
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.487G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4755C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3046G>A
  hgvsp: ENSP00000452946.1:p.Ala1016Thr
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2522G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3046G>A
  hgvsp: ENSP00000380897.2:p.Ala1016Thr
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3112G>A
  hgvsp: ENSP00000256552.6:p.Ala1038Thr
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2818G>A
  hgvsp: ENSP00000453119.1:p.Ala940Thr
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3887C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1607G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.335G>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala1055Thr
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

15-31323207-C-CCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323207
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323209
    reference: chr 15
allele count: 4
allele frequency: 3.310490945807263e-5
allele num: 120828
alternate allele: CCT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3038_3039dupAG
  hgvsp: ENSP00000452946.1:p.Val1014ArgfsTer7
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3038_3039dupAG
  hgvsp: ENSP00000380897.2:p.Val1014ArgfsTer7
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3104_3105dupAG
  hgvsp: ENSP00000256552.6:p.Val1036ArgfsTer7
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1615_*2014-1614dupAG
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.479_480dupAG
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.327_328dupAG
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4745_19-4744dupTC
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3155_3156dupAG
  hgvsp: ENSP00000437849.1:p.Val1053ArgfsTer7
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2810_2811dupAG
  hgvsp: ENSP00000453119.1:p.Val938ArgfsTer7
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3897_260+3898dupTC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2530_428-2529dupAG
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
hgvs: p.Val1053ArgfsTer7
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

15-31323208-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323208
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323208
    reference: chr 15
allele count: 3
allele frequency: 2.483032610494951e-5
allele num: 120820
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3156G>A
  hgvsp: ENST00000542188.1:c.3156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.480G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3039G>A
  hgvsp: ENST00000558445.1:c.3039G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3105G>A
  hgvsp: ENST00000256552.6:c.3105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.328G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4748C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2811G>A
  hgvsp: ENST00000558768.1:c.2811G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3039G>A
  hgvsp: ENST00000397795.2:c.3039G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3894C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2529G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1614G>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu1052Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

15-31323217-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323217
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323217
    reference: chr 15
allele count: 1
allele frequency: 8.276227364518158e-6
allele num: 120828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3096C>T
  hgvsp: ENST00000256552.6:c.3096C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3147C>T
  hgvsp: ENST00000542188.1:c.3147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2538C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3030C>T
  hgvsp: ENST00000558445.1:c.3030C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.471C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2802C>T
  hgvsp: ENST00000558768.1:c.2802C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1623C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3903G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4739G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3030C>T
  hgvsp: ENST00000397795.2:c.3030C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.319C>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile1049Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

15-31323224-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323224
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323224
    reference: chr 15
allele count: 1
allele frequency: 8.276227364518158e-6
allele num: 120828
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2545G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3023G>C
  hgvsp: ENSP00000452946.1:p.Trp1008Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.312G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3140G>C
  hgvsp: ENSP00000437849.1:p.Trp1047Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4732C>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1630G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3089G>C
  hgvsp: ENSP00000256552.6:p.Trp1030Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.464G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3023G>C
  hgvsp: ENSP00000380897.2:p.Trp1008Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2795G>C
  hgvsp: ENSP00000453119.1:p.Trp932Ser
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3910C>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp1047Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

15-31323225-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323225
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323224
    reference: chr 15
allele count: 1
allele frequency: 8.276227364518158e-6
allele num: 120828
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4730delG
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3912delG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3087delC
  hgvsp: ENSP00000256552.6:p.Trp1030GlyfsTer2
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3138delC
  hgvsp: ENSP00000437849.1:p.Trp1047GlyfsTer2
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.462delC
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1632delC
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3021delC
  hgvsp: ENSP00000452946.1:p.Trp1008GlyfsTer2
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.310delC
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2547delC
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3021delC
  hgvsp: ENSP00000380897.2:p.Trp1008GlyfsTer2
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2793delC
  hgvsp: ENSP00000453119.1:p.Trp932GlyfsTer2
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp1047GlyfsTer2
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: AG
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

15-31323234-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323234
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323234
    reference: chr 15
allele count: 2
allele frequency: 1.655218074981379e-5
allele num: 120830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2014-1640A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3130A>G
  hgvsp: ENSP00000437849.1:p.Met1044Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.302A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3920T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2785A>G
  hgvsp: ENSP00000453119.1:p.Met929Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3013A>G
  hgvsp: ENSP00000380897.2:p.Met1005Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3079A>G
  hgvsp: ENSP00000256552.6:p.Met1027Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.454A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2555A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3013A>G
  hgvsp: ENSP00000452946.1:p.Met1005Val
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4722T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1044Val
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

15-31323243-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323243
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323243
    reference: chr 15
allele count: 3
allele frequency: 2.482827112472068e-5
allele num: 120830
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3121A>T
  hgvsp: ENSP00000437849.1:p.Ile1041Phe
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3070A>T
  hgvsp: ENSP00000256552.6:p.Ile1024Phe
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.293A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.3004A>T
  hgvsp: ENSP00000452946.1:p.Ile1002Phe
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.445A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2776A>T
  hgvsp: ENSP00000453119.1:p.Ile926Phe
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3929T>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.3004A>T
  hgvsp: ENSP00000380897.2:p.Ile1002Phe
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4713T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2564A>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1649A>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7745
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile1041Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

15-31323248-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323248
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323248
    reference: chr 15
allele count: 9
allele frequency: 7.448358050847458e-5
allele num: 120832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2999G>A
  hgvsp: ENSP00000380897.2:p.Arg1000Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.440G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3116G>A
  hgvsp: ENSP00000437849.1:p.Arg1039Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2999G>A
  hgvsp: ENSP00000452946.1:p.Arg1000Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.288G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4708C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1644G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3065G>A
  hgvsp: ENSP00000256552.6:p.Arg1022Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3934C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2771G>A
  hgvsp: ENSP00000453119.1:p.Arg924Gln
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2569G>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1039Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

15-31323249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323249
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323249
    reference: chr 15
allele count: 12
allele frequency: 9.931144067796611e-5
allele num: 120832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2998C>T
  hgvsp: ENSP00000380897.2:p.Arg1000Ter
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2998C>T
  hgvsp: ENSP00000452946.1:p.Arg1000Ter
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.439C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.287C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3064C>T
  hgvsp: ENSP00000256552.6:p.Arg1022Ter
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2570C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3115C>T
  hgvsp: ENSP00000437849.1:p.Arg1039Ter
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2770C>T
  hgvsp: ENSP00000453119.1:p.Arg924Ter
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3935G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1643C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4707G>A
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1039Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

15-31323254-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323254
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323254
    reference: chr 15
allele count: 1
allele frequency: 8.276912380605539e-6
allele num: 120818
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2765T>C
  hgvsp: ENSP00000453119.1:p.Leu922Pro
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2993T>C
  hgvsp: ENSP00000380897.2:p.Leu998Pro
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3940A>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3110T>C
  hgvsp: ENSP00000437849.1:p.Leu1037Pro
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2575T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3059T>C
  hgvsp: ENSP00000256552.6:p.Leu1020Pro
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.434T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4702A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2993T>C
  hgvsp: ENSP00000452946.1:p.Leu998Pro
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1638T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.282T>C
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18906
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu1037Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

15-31323270-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323270
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323270
    reference: chr 15
allele count: 1
allele frequency: 8.277734549608463e-6
allele num: 120806
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4686T>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3094A>G
  hgvsp: ENSP00000437849.1:p.Lys1032Glu
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3956T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1622A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2977A>G
  hgvsp: ENSP00000452946.1:p.Lys993Glu
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2591A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2977A>G
  hgvsp: ENSP00000380897.2:p.Lys993Glu
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2749A>G
  hgvsp: ENSP00000453119.1:p.Lys917Glu
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3043A>G
  hgvsp: ENSP00000256552.6:p.Lys1015Glu
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.418A>G
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.266A>G
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15209
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18902
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys1032Glu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

15-31323274-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323274
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323274
    reference: chr 15
allele count: 4
allele frequency: 3.311093819843385e-5
allele num: 120806
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3960C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1618G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.262G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2595G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2745G>A
  hgvsp: ENST00000558768.1:c.2745G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3090G>A
  hgvsp: ENST00000542188.1:c.3090G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2973G>A
  hgvsp: ENST00000558445.1:c.2973G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.414G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3039G>A
  hgvsp: ENST00000256552.6:c.3039G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2973G>A
  hgvsp: ENST00000397795.2:c.2973G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4682C>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu1030Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

15-31323296-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323296
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323296
    reference: chr 15
allele count: 4
allele frequency: 3.311422752785734e-5
allele num: 120794
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2617G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4660C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2723G>A
  hgvsp: ENSP00000453119.1:p.Arg908His
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2951G>A
  hgvsp: ENSP00000380897.2:p.Arg984His
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2951G>A
  hgvsp: ENSP00000452946.1:p.Arg984His
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.240G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1596G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3982C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3068G>A
  hgvsp: ENSP00000437849.1:p.Arg1023His
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.392G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3017G>A
  hgvsp: ENSP00000256552.6:p.Arg1006His
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1023His
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

15-31323297-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323297
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323297
    reference: chr 15
allele count: 4
allele frequency: 3.311422752785734e-5
allele num: 120794
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2722C>T
  hgvsp: ENSP00000453119.1:p.Arg908Cys
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2950C>T
  hgvsp: ENSP00000452946.1:p.Arg984Cys
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3067C>T
  hgvsp: ENSP00000437849.1:p.Arg1023Cys
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2950C>T
  hgvsp: ENSP00000380897.2:p.Arg984Cys
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.391C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1595C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4659G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3983G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3016C>T
  hgvsp: ENSP00000256552.6:p.Arg1006Cys
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.239C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2618C>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg1023Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

15-31323306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323306
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323306
    reference: chr 15
allele count: 2
allele frequency: 1.655711376392867e-5
allele num: 120794
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3992C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2713G>A
  hgvsp: ENSP00000453119.1:p.Gly905Arg
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2941G>A
  hgvsp: ENSP00000380897.2:p.Gly981Arg
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3058G>A
  hgvsp: ENSP00000437849.1:p.Gly1020Arg
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.382G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2941G>A
  hgvsp: ENSP00000452946.1:p.Gly981Arg
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1586G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3007G>A
  hgvsp: ENSP00000256552.6:p.Gly1003Arg
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.230G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2627G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4650C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly1020Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

15-31323307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323307
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323307
    reference: chr 15
allele count: 3
allele frequency: 2.483608185972581e-5
allele num: 120792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2940C>T
  hgvsp: ENST00000397795.2:c.2940C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.3006C>T
  hgvsp: ENST00000256552.6:c.3006C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+3993G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2628C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2712C>T
  hgvsp: ENST00000558768.1:c.2712C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.229C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3057C>T
  hgvsp: ENST00000542188.1:c.3057C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2940C>T
  hgvsp: ENST00000558445.1:c.2940C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.381C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4649G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1585C>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe1019Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

15-31323321-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323321
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323321
    reference: chr 15
allele count: 5
allele frequency: 4.139346976620968e-5
allele num: 120792
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3043G>A
  hgvsp: ENSP00000437849.1:p.Val1015Met
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4007C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2926G>A
  hgvsp: ENSP00000380897.2:p.Val976Met
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2992G>A
  hgvsp: ENSP00000256552.6:p.Val998Met
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2698G>A
  hgvsp: ENSP00000453119.1:p.Val900Met
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4635C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1571G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2926G>A
  hgvsp: ENSP00000452946.1:p.Val976Met
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.367G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.215G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2642G>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3943
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val1015Met
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

15-31323322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323322
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323322
    reference: chr 15
allele count: 101
allele frequency: 8.361480892774356e-4
allele num: 120792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2925C>T
  hgvsp: ENST00000558445.1:c.2925C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3042C>T
  hgvsp: ENST00000542188.1:c.3042C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2991C>T
  hgvsp: ENST00000256552.6:c.2991C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2925C>T
  hgvsp: ENST00000397795.2:c.2925C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.366C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4008G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2697C>T
  hgvsp: ENST00000558768.1:c.2697C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.214C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4634G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2643C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1570C>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 15188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4215
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7745
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
hgvs: p.Val1014Val
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

15-31323324-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323324
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323324
    reference: chr 15
allele count: 9
allele frequency: 7.451071298473358e-5
allele num: 120788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2989G>A
  hgvsp: ENSP00000256552.6:p.Val997Ile
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2923G>A
  hgvsp: ENSP00000452946.1:p.Val975Ile
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1568G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.212G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.364G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4010C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2695G>A
  hgvsp: ENSP00000453119.1:p.Val899Ile
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3040G>A
  hgvsp: ENSP00000437849.1:p.Val1014Ile
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2923G>A
  hgvsp: ENSP00000380897.2:p.Val975Ile
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2645G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4632C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15215
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val1014Ile
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

15-31323325-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323325
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323325
    reference: chr 15
allele count: 42
allele frequency: 3.477281759173401e-4
allele num: 120784
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2988G>A
  hgvsp: ENST00000256552.6:c.2988G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2922G>A
  hgvsp: ENST00000558445.1:c.2922G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3039G>A
  hgvsp: ENST00000542188.1:c.3039G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.363G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4011C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2922G>A
  hgvsp: ENST00000397795.2:c.2922G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.211G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1567G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2694G>A
  hgvsp: ENST00000558768.1:c.2694G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2646G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4631C>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15215
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu1013Leu
num of homozygotes: 1
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

15-31323325-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323325
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323325
    reference: chr 15
allele count: 1
allele frequency: 8.279242283746192e-6
allele num: 120784
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2922G>C
  hgvsp: ENST00000558445.1:c.2922G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2694G>C
  hgvsp: ENST00000558768.1:c.2694G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4631C>G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3039G>C
  hgvsp: ENST00000542188.1:c.3039G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.363G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.211G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2922G>C
  hgvsp: ENST00000397795.2:c.2922G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2646G>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2988G>C
  hgvsp: ENST00000256552.6:c.2988G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4011C>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1567G>C
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu1013Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

15-31323355-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323355
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323355
    reference: chr 15
allele count: 2
allele frequency: 1.657220509761029e-5
allele num: 120684
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.333C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4601G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2664C>T
  hgvsp: ENST00000558768.1:c.2664C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3009C>T
  hgvsp: ENST00000542188.1:c.3009C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2958C>T
  hgvsp: ENST00000256552.6:c.2958C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4041G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2892C>T
  hgvsp: ENST00000397795.2:c.2892C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2892C>T
  hgvsp: ENST00000558445.1:c.2892C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2676C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.181C>T
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1537C>T
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile1003Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP

15-31323358-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323358
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323358
    reference: chr 15
allele count: 2
allele frequency: 1.657357840131263e-5
allele num: 120674
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3006G>A
  hgvsp: ENSP00000437849.1:p.Met1002Ile
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1534G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2661G>A
  hgvsp: ENSP00000453119.1:p.Met887Ile
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.330G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2889G>A
  hgvsp: ENSP00000380897.2:p.Met963Ile
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4044C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2955G>A
  hgvsp: ENSP00000256552.6:p.Met985Ile
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2889G>A
  hgvsp: ENSP00000452946.1:p.Met963Ile
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2679G>A
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4598C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.178G>A
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15154
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1002Ile
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

15-31323360-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323360
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323360
    reference: chr 15
allele count: 31
allele frequency: 2.569202718382231e-4
allele num: 120660
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1532A>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3004A>C
  hgvsp: ENSP00000437849.1:p.Met1002Leu
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2887A>C
  hgvsp: ENSP00000380897.2:p.Met963Leu
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.176A>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4596T>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4046T>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2953A>C
  hgvsp: ENSP00000256552.6:p.Met985Leu
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.328A>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2659A>C
  hgvsp: ENSP00000453119.1:p.Met887Leu
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2887A>C
  hgvsp: ENSP00000452946.1:p.Met963Leu
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2681A>C
  variant of: http://identifiers.org/hgnc/7146
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1930
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15137
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18775
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
hgvs: p.Met1002Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

15-31323367-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323367
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323367
    reference: chr 15
allele count: 1
allele frequency: 8.291461452995706e-6
allele num: 120606
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2688T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4053A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.328-7T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2887-7T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1525T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3004-7T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2887-7T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.169T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2953-7T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2659-7T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4589A>G
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.3004-7T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

15-31323374-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323374
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323374
    reference: chr 15
allele count: 2
allele frequency: 1.659420530350801e-5
allele num: 120524
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3004-14T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4060A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2695T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.328-14T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2659-14T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.162T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2953-14T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1518T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4582A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2887-14T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2887-14T>C
  variant of: http://identifiers.org/hgnc/7146
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

15-31323387-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31323387
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 31323387
    reference: chr 15
allele count: 1
allele frequency: 8.304958059961797e-6
allele num: 120410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453119
  ensembl transcript: ENST00000558768
  gene symbol: TRPM1
  hgvsc: ENST00000558768.1:c.2659-27T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453644
  ensembl transcript: ENST00000560801
  gene symbol: TRPM1
  hgvsc: ENST00000560801.1:c.*2013+1505T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000452946
  ensembl transcript: ENST00000558445
  gene symbol: TRPM1
  hgvsc: ENST00000558445.1:c.2887-27T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000558212
  gene symbol: TRPM1
  hgvsc: ENST00000558212.1:n.149T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000256552
  ensembl transcript: ENST00000256552
  gene symbol: TRPM1
  hgvsc: ENST00000256552.6:c.2953-27T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl transcript: ENST00000557948
  gene symbol: TRPM1
  hgvsc: ENST00000557948.1:n.328-27T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000453477
  ensembl transcript: ENST00000559177
  gene symbol: TRPM1
  hgvsc: ENST00000559177.1:c.428-2708T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000380897
  ensembl transcript: ENST00000397795
  gene symbol: TRPM1
  hgvsc: ENST00000397795.2:c.2887-27T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134160
  ensembl protein: ENSP00000437849
  ensembl transcript: ENST00000542188
  gene symbol: TRPM1
  hgvsc: ENST00000542188.1:c.3004-27T>C
  variant of: http://identifiers.org/hgnc/7146
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000558755
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000558755.1:n.260+4073A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000259720
  ensembl transcript: ENST00000561299
  gene symbol: RP11-348B17.1
  hgvsc: ENST00000561299.1:n.19-4569A>G
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17154
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14070
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26676
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2383
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14659
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7408
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2667
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997781641585227e-5
allele num: 66716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

DP
type: SiteQuality
SIO_000300: 2.23598e6

QD
type: SiteQuality
SIO_000300: 1.358e1

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.66e-1

FS
type: SiteQuality
SIO_000300: 1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.4e-2

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2383
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14664
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2666
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7405
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498890820792614e-4
allele num: 66716
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.388e0

DP
type: SiteQuality
SIO_000300: 2.237158e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.86e-1

QD
type: SiteQuality
SIO_000300: 1.298e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26682
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7405
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14664
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 3261
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2383
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2666
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.91085003455425e-4
allele num: 11576
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.47e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.298e1

DP
type: SiteQuality
SIO_000300: 2.237158e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.388e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26694
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2379
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14647
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7406
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.05e-1

FS
type: SiteQuality
SIO_000300: 1.625e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQ
type: SiteQuality
SIO_000300: 5.898e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
SIO_000300: 2.76e0

DP
type: SiteQuality
SIO_000300: 2.235411e6

QD
type: SiteQuality
SIO_000300: 1.503e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3260
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2379
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2665
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14648
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26687
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7407
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.44e1

MQRankSum
type: SiteQuality
SIO_000300: -8.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

FS
type: SiteQuality
SIO_000300: 6.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.38e-1

DP
type: SiteQuality
SIO_000300: 2.235293e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 3231
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 7265
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variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.049180327868852e-4
allele num: 9760
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
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SIO_000300: 5.954e1

ClippingRankSum
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SIO_000300: -2.61e-1

VQSLOD
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SIO_000300: 4.26e0

BaseQRankSum
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SIO_000300: -5.51e-1

MQRankSum
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SIO_000300: -2.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.223892e6

QD
type: SiteQuality
SIO_000300: 1.013e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.47e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66508
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.025010250102501e-4
allele num: 9756
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.074e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.278e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
SIO_000300: 1.281e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 2.223591e6

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

FS
type: SiteQuality
SIO_000300: 1.1429e1

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1975
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GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.026272577996716e-4
allele num: 9744
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.244996967859309e-4
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.273e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.267e1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e-1

DP
type: SiteQuality
SIO_000300: 2.211676e6

GenotypeQuality
all individuals: 533
bin: 3.25e1
variant carriers: 7

GenotypeQuality
all individuals: 100
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variant carriers: 7

GenotypeQuality
all individuals: 53
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GenotypeQuality
all individuals: 2430
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variant carriers: 28

GenotypeQuality
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variant carriers: 12

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 18

GenotypeQuality
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variant carriers: 13

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 21

GenotypeQuality
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variant carriers: 13070

GenotypeQuality
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variant carriers: 27

GenotypeQuality
all individuals: 28
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variant carriers: 2

GenotypeQuality
all individuals: 790
bin: 8.75e1
variant carriers: 20

African
type: Population
allele count: 2521
allele frequency: 2.597362456212652e-1
allele num: 9706
num of homozygotes: 334

Latino
type: Population
allele count: 732
allele frequency: 6.384092098377812e-2
allele num: 11466
num of homozygotes: 32

South Asian
type: Population
allele count: 1324
allele frequency: 8.039834831187759e-2
allele num: 16468
num of homozygotes: 76

European (Finnish)
type: Population
allele count: 482
allele frequency: 7.320777642770353e-2
allele num: 6584
num of homozygotes: 14

East Asian
type: Population
allele count: 93
allele frequency: 1.095664467483506e-2
allele num: 8488
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 9066
allele frequency: 1.375971345313259e-1
allele num: 65888
num of homozygotes: 579

Other
type: Population
allele count: 100
allele frequency: 1.116071428571429e-1
allele num: 896
num of homozygotes: 4

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

FS
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e-1

DP
type: SiteQuality
SIO_000300: 2.277182e6

QD
type: SiteQuality
SIO_000300: 1.699e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.16e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.663070132417852e-5
allele num: 65248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.41e-1

DP
type: SiteQuality
SIO_000300: 1.926277e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.54e-1

QD
type: SiteQuality
SIO_000300: 1.306e1

InbreedingCoeff
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SIO_000300: 3.4e-3

BaseQRankSum
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MQ
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SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.74e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9548
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536995481233285e-5
allele num: 65062
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 1.707e0

QD
type: SiteQuality
SIO_000300: 1.582e1

ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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SIO_000300: 3.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.183e0

DP
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SIO_000300: 1.883347e6

MQ
type: SiteQuality
SIO_000300: 5.887e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9542
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.765778401122019e-5
allele num: 11408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64936
num of homozygotes: 0

BaseQRankSum
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SIO_000300: 5.39e0

ClippingRankSum
type: SiteQuality
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DP
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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QD
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25768
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505253334136135e-5
allele num: 66434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.73e-1

DP
type: SiteQuality
SIO_000300: 2.227766e6

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 10565
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9452
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012320390396723e-5
allele num: 66394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

FS
type: SiteQuality
SIO_000300: 8.183999999999999e0

DP
type: SiteQuality
SIO_000300: 2.228193e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.18e-1

QD
type: SiteQuality
SIO_000300: 1.199e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.186e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.93e1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9424
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 27545
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66362
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.026272577996716e-4
allele num: 9744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.449e1

FS
type: SiteQuality
SIO_000300: 2.325e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

VQSLOD
type: SiteQuality
SIO_000300: -1.777e0

DP
type: SiteQuality
SIO_000300: 2.227729e6

GenotypeQuality
all individuals: 171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507658907248824e-5
allele num: 66328
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.876e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.13e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e0

FS
type: SiteQuality
SIO_000300: 2.526e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

DP
type: SiteQuality
SIO_000300: 2.226334e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.756e0

VQSLOD
type: SiteQuality
SIO_000300: -1.768e0

QD
type: SiteQuality
SIO_000300: 1.074e1

GenotypeQuality
all individuals: 259
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
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variant carriers: 0

GenotypeQuality
all individuals: 10547
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 89
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variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3861
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3315
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66286
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.851e1

VQSLOD
type: SiteQuality
SIO_000300: -2.971e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.058e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.586e0

QD
type: SiteQuality
SIO_000300: 1.029e1

DP
type: SiteQuality
SIO_000300: 2.22494e6

GenotypeQuality
all individuals: 9325
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 171
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10543
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.087168249330411e-5
allele num: 16428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66250
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.379e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.089e0

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -8.162e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.222658e6

FS
type: SiteQuality
SIO_000300: 3.601e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.19e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3286
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GenotypeQuality
all individuals: 252
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510984859931704e-5
allele num: 66182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.256e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.04e0

VQSLOD
type: SiteQuality
SIO_000300: 8.500000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

DP
type: SiteQuality
SIO_000300: 2.220475e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.598e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.411e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e0

GenotypeDepth
all individuals: 979
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 117
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GenotypeQuality
all individuals: 751
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.481788281154831e-4
allele num: 16418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66172
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.098e1

FS
type: SiteQuality
SIO_000300: 2.463e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 2.220682e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.12e-1

GenotypeQuality
all individuals: 1033
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27238
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 2.75e1
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GenotypeQuality
all individuals: 3788
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10534
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.025077895755816e-5
allele num: 66114
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.198e1

VQSLOD
type: SiteQuality
SIO_000300: 7.63e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.215739e6

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9079
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.0315659170621e-4
allele num: 9694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65974
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.05e1

VQSLOD
type: SiteQuality
SIO_000300: -4.967e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

DP
type: SiteQuality
SIO_000300: 2.208042e6

GenotypeQuality
all individuals: 26940
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
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variant carriers: 0

GenotypeQuality
all individuals: 915
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variant carriers: 0

GenotypeQuality
all individuals: 2126
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3180
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variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.5e0
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GenotypeQuality
all individuals: 239
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variant carriers: 0

GenotypeQuality
all individuals: 103
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variant carriers: 0

GenotypeQuality
all individuals: 10526
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 3676
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65948
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.331545814875262e-4
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.216484089723526e-4
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.626e0

FS
type: SiteQuality
SIO_000300: 5.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.33e0

DP
type: SiteQuality
SIO_000300: 2.206821e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

QD
type: SiteQuality
SIO_000300: 1.159e1

GenotypeQuality
all individuals: 904
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 964
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3101
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variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 813
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8868
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 25033
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10515
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 53
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GenotypeQuality
all individuals: 2079
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.047201145747631e-5
allele num: 65634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 5.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

DP
type: SiteQuality
SIO_000300: 2.179368e6

MQRankSum
type: SiteQuality
SIO_000300: -6.08e-1

QD
type: SiteQuality
SIO_000300: 1.405e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8826
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2376
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variant carriers: 0

GenotypeQuality
all individuals: 903
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variant carriers: 0

GenotypeQuality
all individuals: 971
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variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 721
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variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 10515
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2072
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3577
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25202
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.572194958393026e-5
allele num: 65614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.170411985018727e-4
allele num: 8544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

FS
type: SiteQuality
SIO_000300: 5.03e0

DP
type: SiteQuality
SIO_000300: 2.179064e6

VQSLOD
type: SiteQuality
SIO_000300: 5.679999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.13e-1

QD
type: SiteQuality
SIO_000300: 9.779999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2061
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2501
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 1053
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 898
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variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3565
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10506
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.744287458573173e-4
allele num: 11466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9634
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.73e-1

QD
type: SiteQuality
SIO_000300: 1.308e1

FS
type: SiteQuality
SIO_000300: 1.041e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.554e0

DP
type: SiteQuality
SIO_000300: 2.174727e6

MQRankSum
type: SiteQuality
SIO_000300: -3.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 886
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variant carriers: 0

GenotypeQuality
all individuals: 196
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GenotypeQuality
all individuals: 1211
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variant carriers: 0

GenotypeQuality
all individuals: 1583
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 21
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 8520
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
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GenotypeQuality
all individuals: 704
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GenotypeQuality
all individuals: 23196
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3319
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2043
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.729050279329609e-5
allele num: 11456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65434
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

QD
type: SiteQuality
SIO_000300: 1.819e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.86e0

MQ
type: SiteQuality
SIO_000300: 5.675e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.44e-1

DP
type: SiteQuality
SIO_000300: 2.146754e6

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10471
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 98
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GenotypeQuality
all individuals: 89
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GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 61
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GenotypeQuality
all individuals: 522
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variant carriers: 0

GenotypeQuality
all individuals: 2857
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variant carriers: 0

GenotypeQuality
all individuals: 4629
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variant carriers: 0

GenotypeQuality
all individuals: 1953
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variant carriers: 0

GenotypeQuality
all individuals: 140
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GenotypeQuality
all individuals: 1642
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
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variant carriers: 0

GenotypeQuality
all individuals: 19405
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2882
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8122
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variant carriers: 0

GenotypeQuality
all individuals: 866
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variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 8.778089887640449e-5
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European (Non-Finnish)
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allele frequency: 4.616805170821791e-5
allele num: 64980
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South Asian
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ClippingRankSum
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VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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QD
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FS
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DP
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 64540
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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VQSLOD
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FS
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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MQRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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BaseQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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MQ
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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SIO_000300: 5.654e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64424
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 880
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Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.202704379109291e-5
allele num: 16122
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InbreedingCoeff
type: SiteQuality
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QD
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.37e-1

MQ
type: SiteQuality
SIO_000300: 5.525e1

DP
type: SiteQuality
SIO_000300: 1.969373e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele num: 10808
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Other
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South Asian
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European (Finnish)
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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Other
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Latino
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South Asian
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European (Non-Finnish)
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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QD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Non-Finnish)
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allele num: 66734
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Latino
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European (Finnish)
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Other
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East Asian
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FS
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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QD
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MQ
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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East Asian
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MQRankSum
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QD
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InbreedingCoeff
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MQ
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9832
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

DP
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ClippingRankSum
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ReadPosRankSum
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SIO_000300: 8.06e-1

InbreedingCoeff
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SIO_000300: -3.0e-4

BaseQRankSum
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SIO_000300: 6.45e0

FS
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SIO_000300: 7.78e-1

QD
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SIO_000300: 1.253e1

MQRankSum
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SIO_000300: 2.7e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9834
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 8.105604446503011e-4
allele num: 8636
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -1.553e0

ClippingRankSum
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InbreedingCoeff
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DP
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FS
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ReadPosRankSum
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MQ
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QD
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MQRankSum
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SIO_000300: -1.41e-1

VQSLOD
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SIO_000300: 1.13e0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 6.101281269066504e-4
allele num: 9834
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66738
num of homozygotes: 0

Other
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

ReadPosRankSum
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VQSLOD
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MQRankSum
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FS
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SIO_000300: 2.032e0

InbreedingCoeff
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ClippingRankSum
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QD
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DP
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
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FS
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MQ
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QD
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BaseQRankSum
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Latino
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allele num: 11576
num of homozygotes: 0

South Asian
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MQRankSum
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InbreedingCoeff
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QD
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FS
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MQ
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9844
num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele num: 16512
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East Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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MQ
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MQRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
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num of homozygotes: 0

Latino
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allele frequency: 3.454828122300915e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
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European (Non-Finnish)
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South Asian
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East Asian
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Other
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MQ
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MQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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DP
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FS
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InbreedingCoeff
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

European (Finnish)
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allele count: 0
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allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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FS
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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Other
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European (Non-Finnish)
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allele num: 66736
num of homozygotes: 0

South Asian
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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BaseQRankSum
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66736
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Other
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East Asian
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MQRankSum
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FS
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BaseQRankSum
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MQ
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DP
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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VQSLOD
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MQ
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ReadPosRankSum
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66736
num of homozygotes: 0

European (Finnish)
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Latino
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South Asian
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BaseQRankSum
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MQ
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
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QD
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DP
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele frequency: 4.495055439017081e-5
allele num: 66740
num of homozygotes: 0

African
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European (Finnish)
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Other
type: Population
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DP
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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MQ
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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East Asian
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MQ
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QD
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 12

African
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allele count: 2
allele frequency: 2.030869212022746e-4
allele num: 9848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498351813005694e-4
allele num: 66740
num of homozygotes: 0

East Asian
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Other
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Latino
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South Asian
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European (Finnish)
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ReadPosRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ClippingRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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Other
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FS
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MQ
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ReadPosRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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Other
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African
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South Asian
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European (Finnish)
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Latino
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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Other
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African
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South Asian
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DP
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQRankSum
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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Other
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MQ
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

Latino
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Other
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African
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European (Non-Finnish)
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East Asian
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South Asian
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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African
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Other
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Latino
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European (Finnish)
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MQ
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FS
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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South Asian
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East Asian
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Latino
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African
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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FS
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.05e-1

QD
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SIO_000300: 1.358e1

BaseQRankSum
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SIO_000300: 2.09e0

FS
type: SiteQuality
SIO_000300: 5.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

DP
type: SiteQuality
SIO_000300: 2.170059e6

VQSLOD
type: SiteQuality
SIO_000300: 2.99e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.981e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

GenotypeQuality
all individuals: 4888
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 101

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.046993780234969e-4
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 94
allele frequency: 9.578153658039535e-3
allele num: 9814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.349e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

FS
type: SiteQuality
SIO_000300: 1.213e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.87e-2

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

BaseQRankSum
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SIO_000300: -1.439e0

VQSLOD
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SIO_000300: 4.94e0

DP
type: SiteQuality
SIO_000300: 2.173246e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 12308
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 3593
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 8.153281695882593e-4
allele num: 9812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.28e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

VQSLOD
type: SiteQuality
SIO_000300: 5.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.701e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.167708e6

GenotypeQuality
all individuals: 3686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2336
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12308
bin: 9.75e1
variant carriers: 41

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
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GenotypeQuality
all individuals: 1642
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22527
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variant carriers: 0

GenotypeQuality
all individuals: 4899
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 39
allele frequency: 3.974724826742764e-3
allele num: 9812
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592016588906169e-4
allele num: 11574
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.395e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

DP
type: SiteQuality
SIO_000300: 2.168373e6

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

FS
type: SiteQuality
SIO_000300: 1.992e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3590
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 22527
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12308
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9812
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.395e0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

FS
type: SiteQuality
SIO_000300: 1.992e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-2

DP
type: SiteQuality
SIO_000300: 2.168373e6

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.99868058054456e-5
allele num: 66696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.334e-1

InbreedingCoeff
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SIO_000300: -2.0e-4

QD
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 1.198e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.49e-1

DP
type: SiteQuality
SIO_000300: 2.162696e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

ReadPosRankSum
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SIO_000300: 1.16e0

BaseQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.256e1

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

ClippingRankSum
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SIO_000300: -1.016e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeDepth
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732201628269531e-4
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 2.861230329041488e-3
allele num: 9786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

DP
type: SiteQuality
SIO_000300: 2.160395e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

FS
type: SiteQuality
SIO_000300: 6.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.63e0

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.462e1

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3659
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1634
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22058
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4849
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3549
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9261
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12237
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2327
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.929e1

VQSLOD
type: SiteQuality
SIO_000300: -3.55e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.23e0

FS
type: SiteQuality
SIO_000300: 1.416e0

QD
type: SiteQuality
SIO_000300: 1.288e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.36e-1

DP
type: SiteQuality
SIO_000300: 2.154328e6

GenotypeQuality
all individuals: 156
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1631
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3646
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12231
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9198
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4813
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002011347602894e-5
allele num: 66622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.68e-1

DP
type: SiteQuality
SIO_000300: 2.146128e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 2.419e0

VQSLOD
type: SiteQuality
SIO_000300: 8.78e-1

QD
type: SiteQuality
SIO_000300: 1.091e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.93e0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 3.75e1
variant carriers: 0