12-113559335-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559335
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559335
    reference: chr 12
allele count: 21
allele frequency: 1.731330486256534e-4
allele num: 121294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.407G>A
  hgvsp: ENSP00000261729.5:p.Arg136His
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.407G>A
  hgvsp: ENSP00000395920.3:p.Arg136His
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.723G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.407G>A
  hgvsp: ENSP00000450244.1:p.Arg136His
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.695G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.407G>A
  hgvsp: ENSP00000448510.1:p.Arg136His
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.449G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.874G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5479G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2937
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg136His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

12-113559339-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559339
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559339
    reference: chr 12
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.403C>T
  hgvsp: ENSP00000395920.3:p.Leu135Phe
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.691C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.403C>T
  hgvsp: ENSP00000448510.1:p.Leu135Phe
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.719C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.445C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.870C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.403C>T
  hgvsp: ENSP00000261729.5:p.Leu135Phe
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.403C>T
  hgvsp: ENSP00000450244.1:p.Leu135Phe
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5483C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3712
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28970
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu135Phe
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

12-113559340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559340
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559340
    reference: chr 12
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.444C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.402C>T
  hgvsp: ENST00000261729.5:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.402C>T
  hgvsp: ENST00000446861.3:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5484C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.869C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.690C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.402C>T
  hgvsp: ENST00000546530.1:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.402C>T
  hgvsp: ENST00000548055.1:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.718C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11251
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Cys134Cys
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

12-113559344-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559344
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559344
    reference: chr 12
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.398G>C
  hgvsp: ENSP00000450244.1:p.Arg133Pro
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.398G>C
  hgvsp: ENSP00000448510.1:p.Arg133Pro
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.714G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.398G>C
  hgvsp: ENSP00000261729.5:p.Arg133Pro
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.686G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5488G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.398G>C
  hgvsp: ENSP00000395920.3:p.Arg133Pro
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.865G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.440G>C
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5133
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11249
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg133Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

12-113559353-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559353
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559353
    reference: chr 12
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.431G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.389G>A
  hgvsp: ENSP00000261729.5:p.Gly130Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.677G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5497G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.389G>A
  hgvsp: ENSP00000395920.3:p.Gly130Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.389G>A
  hgvsp: ENSP00000448510.1:p.Gly130Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.856G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.705G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.389G>A
  hgvsp: ENSP00000450244.1:p.Gly130Glu
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly130Glu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

12-113559354-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559354
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559354
    reference: chr 12
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.855G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.676G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.388G>A
  hgvsp: ENSP00000448510.1:p.Gly130Arg
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.388G>A
  hgvsp: ENSP00000395920.3:p.Gly130Arg
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5498G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.704G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.388G>A
  hgvsp: ENSP00000261729.5:p.Gly130Arg
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.388G>A
  hgvsp: ENSP00000450244.1:p.Gly130Arg
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.430G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3496
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3707
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8221
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2492
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly130Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

12-113559355-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559355
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559355
    reference: chr 12
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.703T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.387T>C
  hgvsp: ENST00000546530.1:c.387T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.854T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.675T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5499T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.387T>C
  hgvsp: ENST00000446861.3:c.387T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.429T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.387T>C
  hgvsp: ENST00000261729.5:c.387T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.387T>C
  hgvsp: ENST00000548055.1:c.387T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12242
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11249
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp129Asp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

12-113559357-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559357
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559357
    reference: chr 12
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.385G>A
  hgvsp: ENSP00000448510.1:p.Asp129Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.673G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.385G>A
  hgvsp: ENSP00000261729.5:p.Asp129Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.701G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.385G>A
  hgvsp: ENSP00000450244.1:p.Asp129Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.385G>A
  hgvsp: ENSP00000395920.3:p.Asp129Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.852G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5501G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.427G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1078
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp129Asn
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

12-113559360-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559360
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559360
    reference: chr 12
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.382G>A
  hgvsp: ENSP00000261729.5:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.849G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.382G>A
  hgvsp: ENSP00000450244.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.382G>A
  hgvsp: ENSP00000395920.3:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.424G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5504G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.382G>A
  hgvsp: ENSP00000448510.1:p.Glu128Lys
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.698G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.670G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11248
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29001
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3704
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu128Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-113559361-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559361
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559361
    reference: chr 12
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.423G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5505G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.669G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.697G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.381G>A
  hgvsp: ENST00000261729.5:c.381G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.381G>A
  hgvsp: ENST00000546530.1:c.381G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.848G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.381G>A
  hgvsp: ENST00000446861.3:c.381G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.381G>A
  hgvsp: ENST00000548055.1:c.381G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2941
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu127Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

12-113559363-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559363
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559363
    reference: chr 12
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.379C>G
  hgvsp: ENSP00000261729.5:p.Leu127Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.846C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.667C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.421C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.379C>G
  hgvsp: ENSP00000395920.3:p.Leu127Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.379C>G
  hgvsp: ENSP00000448510.1:p.Leu127Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.379C>G
  hgvsp: ENSP00000450244.1:p.Leu127Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5507C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.695C>G
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2938
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu127Val
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-113559373-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559373
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559373
    reference: chr 12
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.369A>G
  hgvsp: ENST00000446861.3:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.369A>G
  hgvsp: ENST00000261729.5:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.836A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.411A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5517A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.657A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.369A>G
  hgvsp: ENST00000548055.1:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.369A>G
  hgvsp: ENST00000546530.1:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.685A>G
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2020
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser123Ser
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

12-113559399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559399
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559399
    reference: chr 12
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.659G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.343G>A
  hgvsp: ENSP00000395920.3:p.Glu115Lys
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.343G>A
  hgvsp: ENSP00000261729.5:p.Glu115Lys
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.631G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.343G>A
  hgvsp: ENSP00000448510.1:p.Glu115Lys
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5543G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.343G>A
  hgvsp: ENSP00000450244.1:p.Glu115Lys
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.810G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.385G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2500
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu115Lys
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ

12-113559400-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559400
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559400
    reference: chr 12
allele count: 8
allele frequency: 6.5955447095487e-5
allele num: 121294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.658A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.630A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.342A>G
  hgvsp: ENST00000548055.1:c.342A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.342A>G
  hgvsp: ENST00000261729.5:c.342A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.384A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.342A>G
  hgvsp: ENST00000446861.3:c.342A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5544A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.342A>G
  hgvsp: ENST00000546530.1:c.342A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.809A>G
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20577
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala114Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-113559408-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559408
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559408
    reference: chr 12
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.334C>T
  hgvsp: ENSP00000261729.5:p.Pro112Ser
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.334C>T
  hgvsp: ENSP00000448510.1:p.Pro112Ser
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.650C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.334C>T
  hgvsp: ENSP00000450244.1:p.Pro112Ser
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.801C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5552C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.334C>T
  hgvsp: ENSP00000395920.3:p.Pro112Ser
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.622C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.376C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29008
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8194
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro112Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

12-113559431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559431
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559431
    reference: chr 12
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.311G>A
  hgvsp: ENSP00000450244.1:p.Trp104Ter
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.778G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.311G>A
  hgvsp: ENSP00000395920.3:p.Trp104Ter
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.353G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.599G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.311G>A
  hgvsp: ENSP00000261729.5:p.Trp104Ter
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.311G>A
  hgvsp: ENSP00000448510.1:p.Trp104Ter
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.627G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5575G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Trp104Ter
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

12-113559447-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559447
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559447
    reference: chr 12
allele count: 14592
allele frequency: 1.206169716808015e-1
allele num: 120978
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-4T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-4T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-4T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-4T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-4T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-4T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-4T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-4T>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5591T>C
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 4.75e1
  variant carriers: 1808
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.25e1
  variant carriers: 268
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19978
  bin: 2.75e1
  variant carriers: 546
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 9.75e1
  variant carriers: 466
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 1034
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 6.75e1
  variant carriers: 766
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 5.75e1
  variant carriers: 1354
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 1.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3493
  bin: 4.25e1
  variant carriers: 1736
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 11677
  bin: 3.25e1
  variant carriers: 944
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 7.25e1
  variant carriers: 557
genotype depth: GenotypeDepth
  all individuals: 5136
  bin: 3.75e1
  variant carriers: 1436
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 5.25e1
  variant carriers: 1620
genotype depth: GenotypeDepth
  all individuals: 8495
  bin: 2.25e1
  variant carriers: 279
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 8.75e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.75e1
  variant carriers: 349
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 123
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15874
  bin: 9.75e1
  variant carriers: 13368
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.25e1
  variant carriers: 15
hgvs: c.299-4T>C
num of homozygotes: 1023
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

12-113559458-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559458
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559458
    reference: chr 12
allele count: 29
allele frequency: 2.405361467768156e-4
allele num: 120564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-15G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-15G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-15G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-15G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5602G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-15G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-15G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-15G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-15G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10419
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13180
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24577
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3339
  bin: 9.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-113559464-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559464
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559464
    reference: chr 12
allele count: 1
allele frequency: 8.311032063961702e-6
allele num: 120322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5608G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-21G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-21G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-21G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-21G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-21G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-21G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-21G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-21G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12687
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

12-113559466-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559466
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559466
    reference: chr 12
allele count: 1
allele frequency: 8.31766839119658e-6
allele num: 120226
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-23A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-23A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-23A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-23A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5610A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-23A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-23A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-23A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-23A>C
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12366
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2782
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8536
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

12-113559475-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559475
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559475
    reference: chr 12
allele count: 3
allele frequency: 2.501709501492687e-5
allele num: 119918
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-32G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-32G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-32G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-32G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-32G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-32G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-32G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5619G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-32G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20586
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3654
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

12-113559476-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559476
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559476
    reference: chr 12
allele count: 10
allele frequency: 8.3462700519138e-5
allele num: 119814
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-33C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-33C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-33C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-33C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-33C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-33C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-33C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5620C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-33C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20304
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4694
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10917
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4495
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3160
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3791
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

12-113559477-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559477
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559477
    reference: chr 12
allele count: 2
allele frequency: 1.6679454248257e-5
allele num: 119908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-34G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5621G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-34G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-34G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-34G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-34G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-34G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-34G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-34G>C
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5061
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3942
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-113559481-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559481
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559481
    reference: chr 12
allele count: 1
allele frequency: 8.356033892073466e-6
allele num: 119674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-38G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-38G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-38G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-38G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5625G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-38G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-38G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-38G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-38G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18432
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26506
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1017
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4274
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3327
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7310
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP

12-113559484-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559484
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559484
    reference: chr 12
allele count: 2
allele frequency: 1.672436572842975e-5
allele num: 119586
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-41A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-41A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-41A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-41A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-41A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-41A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-41A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-41A>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5628A>G
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10069
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7097
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2949
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4421
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

12-113559484-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559484
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559484
    reference: chr 12
allele count: 1
allele frequency: 8.362182864214875e-6
allele num: 119586
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-41A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5628A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-41A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-41A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-41A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-41A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-41A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-41A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-41A>C
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10069
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2949
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2312
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

12-113559485-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113559485
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113559485
    reference: chr 12
allele count: 1
allele frequency: 8.371423309391063e-6
allele num: 119454
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.299-42C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.299-42C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.615-42C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.358-5629C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.587-42C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.299-42C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.299-42C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.341-42C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.766-42C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8591
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6999
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2911
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

12-113565576-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565576
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565576
    reference: chr 12
allele count: 1
allele frequency: 8.537085097664253e-6
allele num: 117136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.298+41C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.298+41C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7627C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.298+41C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.340+41C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.765+41C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.614+41C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.298+41C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.586+41C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3621
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7175
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2472
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3753
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3633
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

12-113565577-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565577
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565577
    reference: chr 12
allele count: 1
allele frequency: 8.538980445734779e-6
allele num: 117110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.298+40C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.298+40C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.765+40C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.298+40C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.298+40C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7626C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.586+40C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.340+40C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.614+40C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6929
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6030
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3659
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3757
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/12-113565607-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565607
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565607
    reference: chr 12
allele count: 3
allele frequency: 2.532243905733e-5
allele num: 118472
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.298+10G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.586+10G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7596G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.298+10G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.614+10G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.298+10G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.340+10G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.765+10G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.298+10G>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9692
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8815
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2481
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3634
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3999
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

12-113565610-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565610
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565610
    reference: chr 12
allele count: 13
allele frequency: 1.094681531880494e-4
allele num: 118756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.298+7G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.298+7G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.298+7G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.586+7G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.614+7G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.765+7G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.340+7G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7593G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.298+7G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2480
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8819
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8154
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
hgvs: c.298+7G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

12-113565611-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565611
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565611
    reference: chr 12
allele count: 3
allele frequency: 2.521813688404701e-5
allele num: 118962
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7592C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.298+6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.765+6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.614+6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.298+6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.340+6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.586+6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.298+6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.298+6C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3879
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3638
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: c.298+6C>T
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD

12-113565612-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565612
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565612
    reference: chr 12
allele count: 1
allele frequency: 8.39898540256337e-6
allele num: 119062
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.298+5G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.340+5G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.614+5G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.298+5G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.586+5G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.298+5G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.298+5G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.765+5G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7591G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8829
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7000
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9986
  bin: 6.25e1
  variant carriers: 0
hgvs: c.298+5G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

12-113565620-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565620
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565620
    reference: chr 12
allele count: 4
allele frequency: 3.3406270356946e-5
allele num: 119738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.295C>T
  hgvsp: ENSP00000395920.3:p.Arg99Ter
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.611C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7583C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.295C>T
  hgvsp: ENSP00000261729.5:p.Arg99Ter
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.337C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.295C>T
  hgvsp: ENSP00000450244.1:p.Arg99Ter
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.762C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.295C>T
  hgvsp: ENSP00000448510.1:p.Arg99Ter
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.583C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8844
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27067
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Arg99Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

12-113565621-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565621
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565621
    reference: chr 12
allele count: 1
allele frequency: 8.3462700519138e-6
allele num: 119814
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.294C>T
  hgvsp: ENST00000546530.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.761C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.582C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.294C>T
  hgvsp: ENST00000548055.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.336C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.610C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7582C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.294C>T
  hgvsp: ENST00000446861.3:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.294C>T
  hgvsp: ENST00000261729.5:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3648
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4148
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro98Pro
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

12-113565624-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565624
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565624
    reference: chr 12
allele count: 1
allele frequency: 8.33541718763024e-6
allele num: 119970
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.291C>A
  hgvsp: ENSP00000450244.1:p.Asp97Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.291C>A
  hgvsp: ENSP00000395920.3:p.Asp97Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.607C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.291C>A
  hgvsp: ENSP00000448510.1:p.Asp97Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.333C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7579C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.291C>A
  hgvsp: ENSP00000261729.5:p.Asp97Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.758C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.579C>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8697
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3924
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11058
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp97Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

12-113565625-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565625
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565625
    reference: chr 12
allele count: 1
allele frequency: 8.333888925928395e-6
allele num: 119992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.578A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.290A>T
  hgvsp: ENSP00000448510.1:p.Asp97Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.290A>T
  hgvsp: ENSP00000450244.1:p.Asp97Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7578A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.332A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.606A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.290A>T
  hgvsp: ENSP00000261729.5:p.Asp97Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.290A>T
  hgvsp: ENSP00000395920.3:p.Asp97Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.757A>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8741
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8845
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp97Val
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

12-113565626-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565626
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565626
    reference: chr 12
allele count: 3
allele frequency: 2.499416802746026e-5
allele num: 120028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.289G>A
  hgvsp: ENSP00000448510.1:p.Asp97Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.331G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.756G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.289G>A
  hgvsp: ENSP00000261729.5:p.Asp97Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.577G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.289G>A
  hgvsp: ENSP00000395920.3:p.Asp97Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7577G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.605G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.289G>A
  hgvsp: ENSP00000450244.1:p.Asp97Asn
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7020
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp97Asn
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-113565627-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565627
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565627
    reference: chr 12
allele count: 10
allele frequency: 8.327642777435419e-5
allele num: 120082
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.288C>T
  hgvsp: ENST00000546530.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7576C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.330C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.288C>T
  hgvsp: ENST00000446861.3:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.576C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.288C>T
  hgvsp: ENST00000261729.5:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.604C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.288C>T
  hgvsp: ENST00000548055.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.755C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9842
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4207
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala96Ala
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum

12-113565628-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565628
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565628
    reference: chr 12
allele count: 12
allele frequency: 9.989677333422131e-5
allele num: 120124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.287C>A
  hgvsp: ENSP00000261729.5:p.Ala96Asp
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.603C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.287C>A
  hgvsp: ENSP00000395920.3:p.Ala96Asp
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.754C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7575C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.287C>A
  hgvsp: ENSP00000450244.1:p.Ala96Asp
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.575C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.287C>A
  hgvsp: ENSP00000448510.1:p.Ala96Asp
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.329C>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7020
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8844
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8842
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2484
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala96Asp
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

12-113565631-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565631
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565631
    reference: chr 12
allele count: 2
allele frequency: 1.6628421297682e-5
allele num: 120276
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.284C>T
  hgvsp: ENSP00000450244.1:p.Thr95Ile
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.284C>T
  hgvsp: ENSP00000261729.5:p.Thr95Ile
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.284C>T
  hgvsp: ENSP00000395920.3:p.Thr95Ile
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.326C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7572C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.284C>T
  hgvsp: ENSP00000448510.1:p.Thr95Ile
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.751C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.572C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.600C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr95Ile
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-113565636-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565636
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565636
    reference: chr 12
allele count: 1
allele frequency: 8.305647840531562e-6
allele num: 120400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.279G>A
  hgvsp: ENST00000446861.3:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.279G>A
  hgvsp: ENST00000261729.5:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.595G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.567G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7567G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.279G>A
  hgvsp: ENST00000546530.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.279G>A
  hgvsp: ENST00000548055.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.321G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.746G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7016
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4055
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27096
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala93Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

12-113565637-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565637
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565637
    reference: chr 12
allele count: 1012
allele frequency: 8.401547478705564e-3
allele num: 120454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.278C>T
  hgvsp: ENSP00000448510.1:p.Ala93Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.278C>T
  hgvsp: ENSP00000261729.5:p.Ala93Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.278C>T
  hgvsp: ENSP00000395920.3:p.Ala93Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7566C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.566C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.278C>T
  hgvsp: ENSP00000450244.1:p.Ala93Val
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.745C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.320C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.594C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 4.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 5.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 6.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 8885
  bin: 2.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 8.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9736
  bin: 3.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 5135
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8862
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 8750
  bin: 3.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 7.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 5.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 9.75e1
  variant carriers: 434
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 6.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4182
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala93Val
num of homozygotes: 7
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

12-113565638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565638
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565638
    reference: chr 12
allele count: 1
allele frequency: 8.299995020002988e-6
allele num: 120482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.277G>A
  hgvsp: ENSP00000261729.5:p.Ala93Thr
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.319G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.277G>A
  hgvsp: ENSP00000450244.1:p.Ala93Thr
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7565G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.565G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.277G>A
  hgvsp: ENSP00000448510.1:p.Ala93Thr
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.593G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.744G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.277G>A
  hgvsp: ENSP00000395920.3:p.Ala93Thr
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2626
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4003
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala93Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

12-113565651-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565651
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565651
    reference: chr 12
allele count: 1
allele frequency: 8.288162845823595e-6
allele num: 120654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.264G>A
  hgvsp: ENST00000261729.5:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.306G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.731G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.264G>A
  hgvsp: ENST00000446861.3:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.264G>A
  hgvsp: ENST00000548055.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.552G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7552G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.264G>A
  hgvsp: ENST00000546530.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.580G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8949
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9769
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3888
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2628
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser88Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

12-113565652-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565652
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565652
    reference: chr 12
allele count: 75
allele frequency: 6.215916060269523e-4
allele num: 120658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.263C>T
  hgvsp: ENSP00000448510.1:p.Ser88Leu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.263C>T
  hgvsp: ENSP00000450244.1:p.Ser88Leu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.263C>T
  hgvsp: ENSP00000261729.5:p.Ser88Leu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.579C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.305C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.551C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.730C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.263C>T
  hgvsp: ENSP00000395920.3:p.Ser88Leu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7551C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9760
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8949
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9032
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 9.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 27461
  bin: 9.75e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 4003
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser88Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

12-113565662-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565662
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565662
    reference: chr 12
allele count: 1
allele frequency: 8.285141427364165e-6
allele num: 120698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.720G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.253G>A
  hgvsp: ENSP00000395920.3:p.Gly85Ser
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.569G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.253G>A
  hgvsp: ENSP00000261729.5:p.Gly85Ser
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.253G>A
  hgvsp: ENSP00000450244.1:p.Gly85Ser
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.541G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7541G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.253G>A
  hgvsp: ENSP00000448510.1:p.Gly85Ser
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.295G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8738
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27441
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly85Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

12-113565662-CGAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565662
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565659
    reference: chr 12
allele count: 2
allele frequency: 1.657028285472833e-5
allele num: 120698
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.250_252delATC
  hgvsp: ENSP00000448510.1:p.Ile84del
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.250_252delATC
  hgvsp: ENSP00000261729.5:p.Ile84del
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.250_252delATC
  hgvsp: ENSP00000395920.3:p.Ile84del
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.566_568delATC
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.250_252delATC
  hgvsp: ENSP00000450244.1:p.Ile84del
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.717_719delATC
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.538_540delATC
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7538_357+7540delATC
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.292_294delATC
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile84del
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: CGAT
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

12-113565663-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565663
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565663
    reference: chr 12
allele count: 371
allele frequency: 3.073380055337409e-3
allele num: 120714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.540C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.568C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.294C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.252C>T
  hgvsp: ENST00000446861.3:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.252C>T
  hgvsp: ENST00000261729.5:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7540C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.252C>T
  hgvsp: ENST00000548055.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.252C>T
  hgvsp: ENST00000546530.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.719C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 9.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 6.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 8735
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9057
  bin: 2.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8723
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 9738
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 6927
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 8.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile84Ile
num of homozygotes: 6
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

12-113565672-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565672
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565672
    reference: chr 12
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.559C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.243C>T
  hgvsp: ENST00000546530.1:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.710C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.243C>T
  hgvsp: ENST00000446861.3:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.285C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.243C>T
  hgvsp: ENST00000548055.1:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7531C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.243C>T
  hgvsp: ENST00000261729.5:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.531C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3642
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5153
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11360
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp81Asp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-113565674-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565674
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565674
    reference: chr 12
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.241G>C
  hgvsp: ENSP00000395920.3:p.Asp81His
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7529G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.241G>C
  hgvsp: ENSP00000450244.1:p.Asp81His
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.241G>C
  hgvsp: ENSP00000448510.1:p.Asp81His
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.708G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.557G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.241G>C
  hgvsp: ENSP00000261729.5:p.Asp81His
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.529G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.283G>C
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5153
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3854
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3582
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp81His
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

12-113565674-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565674
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565674
    reference: chr 12
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.241G>A
  hgvsp: ENSP00000395920.3:p.Asp81Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.529G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.241G>A
  hgvsp: ENSP00000261729.5:p.Asp81Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.283G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.241G>A
  hgvsp: ENSP00000448510.1:p.Asp81Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.708G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.241G>A
  hgvsp: ENSP00000450244.1:p.Asp81Asn
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.557G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7529G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5153
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8701
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3981
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp81Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

12-113565675-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565675
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565675
    reference: chr 12
allele count: 303
allele frequency: 2.511563137215895e-3
allele num: 120642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.240C>T
  hgvsp: ENST00000548055.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.556C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.240C>T
  hgvsp: ENST00000546530.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.282C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.707C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.528C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.240C>T
  hgvsp: ENST00000446861.3:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7528C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.240C>T
  hgvsp: ENST00000261729.5:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6913
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8390
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9718
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 9.75e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 6.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 8667
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 9052
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 5.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27768
  bin: 9.75e1
  variant carriers: 299
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His80His
num of homozygotes: 3
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

12-113565684-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565684
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565684
    reference: chr 12
allele count: 1
allele frequency: 8.298341991270144e-6
allele num: 120506
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.698C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7519C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-6C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-6C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9716
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4149
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
hgvs: c.237-6C>T
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD

12-113565684-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565684
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565684
    reference: chr 12
allele count: 8
allele frequency: 6.638673593016116e-5
allele num: 120506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-6C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7519C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-6C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-6C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-6C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-6C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-6C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.698C>G
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-6C>G
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9716
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10680
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3575
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
hgvs: c.237-6C>G
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-113565690-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565690
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565690
    reference: chr 12
allele count: 2
allele frequency: 1.662151156026129e-5
allele num: 120326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7513G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.692G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-12G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-12G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-12G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-12G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-12G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-12G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-12G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3575
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3849
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27678
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

12-113565691-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565691
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565691
    reference: chr 12
allele count: 7
allele frequency: 5.816078965734986e-5
allele num: 120356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-13C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-13C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-13C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-13C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-13C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7512C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-13C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.691C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-13C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3960
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3847
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

12-113565697-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565697
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565697
    reference: chr 12
allele count: 2
allele frequency: 1.663229326059477e-5
allele num: 120248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-19C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-19C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-19C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-19C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7506C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-19C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-19C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.685C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-19C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8672
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3842
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9400
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3962
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

12-113565698-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565698
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565698
    reference: chr 12
allele count: 4
allele frequency: 3.326126725428239e-5
allele num: 120260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.684A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-20A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-20A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7505A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-20A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-20A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-20A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-20A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-20A>T
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8673
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27686
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

12-113565714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565714
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565714
    reference: chr 12
allele count: 1
allele frequency: 8.337085021593051e-6
allele num: 119946
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-36C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7489C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-36C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-36C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.668C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-36C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-36C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-36C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-36C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6927
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3955
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3967
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

12-113565716-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565716
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565716
    reference: chr 12
allele count: 1
allele frequency: 8.348499774590506e-6
allele num: 119782
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-38C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-38C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-38C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-38C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7487C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.666C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-38C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-38C>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-38C>T
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6927
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2477
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6626
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

12-113565720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565720
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565720
    reference: chr 12
allele count: 1
allele frequency: 8.350730688935283e-6
allele num: 119750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-42G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-42G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-42G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-42G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-42G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7483G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-42G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.662G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-42G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9562
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3956
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6795
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

12-113565720-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565720
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565719
    reference: chr 12
allele count: 1
allele frequency: 8.350730688935283e-6
allele num: 119750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.661delA
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-43delA
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-43delA
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-43delA
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-43delA
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-43delA
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-43delA
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-43delA
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7482delA
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8648
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2556
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: CT
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

12-113565722-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565722
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565722
    reference: chr 12
allele count: 3
allele frequency: 2.504884524823406e-5
allele num: 119766
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-44A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-44A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-44A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7481A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-44A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.660A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-44A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-44A>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-44A>C
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8646
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3824
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/12-113565726-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565726
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565726
    reference: chr 12
allele count: 1
allele frequency: 8.358548287333457e-6
allele num: 119638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-48G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-48G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.656G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-48G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-48G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-48G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-48G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-48G>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7477G>T
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3643
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6611
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3830
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

12-113565728-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565728
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565728
    reference: chr 12
allele count: 93
allele frequency: 7.782687286603736e-4
allele num: 119496
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-50G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-50G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-50G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-50G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-50G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.654G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7475G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-50G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-50G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9506
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5846
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6926
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2558
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ

12-113565729-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565729
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565729
    reference: chr 12
allele count: 13
allele frequency: 1.088029996150048e-4
allele num: 119482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7474C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.653C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.525-51C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.237-51C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.237-51C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.279-51C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.237-51C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.553-51C>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.237-51C>A
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8645
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5162
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3641
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

12-113565832-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565832
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565832
    reference: chr 12
allele count: 1
allele frequency: 8.304958059961797e-6
allele num: 120410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.236+38A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.524+38A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7371A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.552+38A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.550A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.236+38A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.236+38A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.236+38A>T
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.278+38A>T
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4799
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

12-113565858-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565858
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565858
    reference: chr 12
allele count: 1
allele frequency: 8.270204108637402e-6
allele num: 120916
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.236+12G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.552+12G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7345G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.278+12G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.524+12G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.236+12G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.524G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.236+12G>C
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.236+12G>C
  variant of: http://identifiers.org/hgnc/9873
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4799
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34733
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD

12-113565870-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 113565870
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 113565870
    reference: chr 12
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000395920
  ensembl transcript: ENST00000446861
  gene symbol: RASAL1
  hgvsc: ENST00000446861.3:c.236G>A
  hgvsp: ENSP00000395920.3:p.Gly79Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000450244
  ensembl transcript: ENST00000546530
  gene symbol: RASAL1
  hgvsc: ENST00000546530.1:c.236G>A
  hgvsp: ENSP00000450244.1:p.Gly79Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000261729
  ensembl transcript: ENST00000261729
  gene symbol: RASAL1
  hgvsc: ENST00000261729.5:c.236G>A
  hgvsp: ENSP00000261729.5:p.Gly79Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111344
  ensembl protein: ENSP00000448510
  ensembl transcript: ENST00000548055
  gene symbol: RASAL1
  hgvsc: ENST00000548055.1:c.236G>A
  hgvsp: ENSP00000448510.1:p.Gly79Glu
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000548972
  gene symbol: RASAL1
  hgvsc: ENST00000548972.1:n.524G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000546727
  gene symbol: RASAL1
  hgvsc: ENST00000546727.1:n.278G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000551051
  gene symbol: RASAL1
  hgvsc: ENST00000551051.1:n.512G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000418411
  gene symbol: RASAL1
  hgvsc: ENST00000418411.2:n.552G>A
  variant of: http://identifiers.org/hgnc/9873
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111344
  ensembl transcript: ENST00000547810
  gene symbol: RASAL1
  hgvsc: ENST00000547810.1:n.357+7333G>A
  variant of: http://identifiers.org/hgnc/9873
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4800
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly79Glu
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1663
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11258
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 28872
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8205
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3711
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.510634618710012e-4
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.499745043342632e-4
allele num: 66678
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

QD
type: SiteQuality
SIO_000300: 1.051e1

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

FS
type: SiteQuality
SIO_000300: 5.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

DP
type: SiteQuality
SIO_000300: 2.100779e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2942
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8213
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11252
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1665
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2493
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.479e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 2.099273e6

FS
type: SiteQuality
SIO_000300: 1.794e0

QD
type: SiteQuality
SIO_000300: 9.92e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.315e0

VQSLOD
type: SiteQuality
SIO_000300: 7.88e-1

GenotypeQuality
all individuals: 2492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8208
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28960
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2942
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 2.099288e6

VQSLOD
type: SiteQuality
SIO_000300: -2.152e0

FS
type: SiteQuality
SIO_000300: 1.3659e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.35e-1

QD
type: SiteQuality
SIO_000300: 1.2e1

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1079
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3709
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variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8207
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.545e0

DP
type: SiteQuality
SIO_000300: 2.099487e6

FS
type: SiteQuality
SIO_000300: 3.236e0

VQSLOD
type: SiteQuality
SIO_000300: -2.121e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.97e0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 6.48e0

MQ
type: SiteQuality
SIO_000300: 5.897e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28999
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1078
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11249
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.389999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.91e-1

FS
type: SiteQuality
SIO_000300: 6.141e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.242e1

MQ
type: SiteQuality
SIO_000300: 5.873e1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: -1.184e0

DP
type: SiteQuality
SIO_000300: 2.099688e6

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2939
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.9e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

DP
type: SiteQuality
SIO_000300: 2.099652e6

VQSLOD
type: SiteQuality
SIO_000300: 2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

QD
type: SiteQuality
SIO_000300: 1.073e1

GenotypeQuality
all individuals: 89
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8222
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.02e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 6.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.24e-1

FS
type: SiteQuality
SIO_000300: 2.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.58e-1

DP
type: SiteQuality
SIO_000300: 2.099608e6

QD
type: SiteQuality
SIO_000300: 9.640000000000001e0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2944
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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ReadPosRankSum
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SIO_000300: 1.39e-1

MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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VQSLOD
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MQRankSum
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BaseQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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MQRankSum
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FS
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DP
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
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allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQ
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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QD
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BaseQRankSum
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VQSLOD
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MQ
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SIO_000300: 5.845e1

MQRankSum
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DP
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FS
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
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South Asian
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European (Non-Finnish)
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allele num: 66700
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East Asian
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European (Finnish)
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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MQ
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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Other
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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DP
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FS
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Finnish)
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East Asian
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African
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Latino
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European (Non-Finnish)
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Other
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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ClippingRankSum
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QD
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MQRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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Latino
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East Asian
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South Asian
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African
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European (Finnish)
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BaseQRankSum
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QD
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MQ
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MQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e-2

FS
type: SiteQuality
SIO_000300: 3.67e0

DP
type: SiteQuality
SIO_000300: 2.093772e6

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.593e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.347e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
all individuals: 108
bin: 5.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1743
bin: 8.25e1
variant carriers: 23

GenotypeQuality
all individuals: 387
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 667
bin: 8.75e1
variant carriers: 20

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 9

GenotypeQuality
all individuals: 144
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 9

GenotypeQuality
all individuals: 144
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2917
bin: 7.75e1
variant carriers: 29

GenotypeQuality
all individuals: 2392
bin: 7.25e1
variant carriers: 7

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 7379
bin: 6.75e1
variant carriers: 20

GenotypeQuality
all individuals: 27649
bin: 6.25e1
variant carriers: 19

GenotypeQuality
all individuals: 820
bin: 9.25e1
variant carriers: 35

East Asian
type: Population
allele count: 3
allele frequency: 3.473830477072719e-4
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 1241
allele frequency: 1.199497390295766e-1
allele num: 10346
num of homozygotes: 55

European (Finnish)
type: Population
allele count: 907
allele frequency: 1.376327769347496e-1
allele num: 6590
num of homozygotes: 62

South Asian
type: Population
allele count: 1346
allele frequency: 8.164503214848963e-2
allele num: 16486
num of homozygotes: 73

Other
type: Population
allele count: 113
allele frequency: 1.263982102908277e-1
allele num: 894
num of homozygotes: 9

Latino
type: Population
allele count: 920
allele frequency: 7.993049522154648e-2
allele num: 11510
num of homozygotes: 34

European (Non-Finnish)
type: Population
allele count: 10062
allele frequency: 1.512718744362259e-1
allele num: 66516
num of homozygotes: 790

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

FS
type: SiteQuality
SIO_000300: 7.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

DP
type: SiteQuality
SIO_000300: 2.128964e6

VQSLOD
type: SiteQuality
SIO_000300: 3.92e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.652e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.47e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e-1

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2170
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 359
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variant carriers: 0

GenotypeQuality
all individuals: 34911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2905
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.688044952528579e-5
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.614606937423741e-4
allele num: 11474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.519756838905775e-4
allele num: 6580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.622094778146695e-4
allele num: 66260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.256e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.379e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.803471e6

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

FS
type: SiteQuality
SIO_000300: 7.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

GenotypeQuality
all individuals: 1997
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2135
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variant carriers: 0

GenotypeQuality
all individuals: 1060
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variant carriers: 0

GenotypeQuality
all individuals: 730
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variant carriers: 0

GenotypeQuality
all individuals: 168
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 33916
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3490
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512447442451375e-5
allele num: 66118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.48e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.813e1

QD
type: SiteQuality
SIO_000300: 1.386e1

DP
type: SiteQuality
SIO_000300: 1.777619e6

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.616e0

GenotypeQuality
all individuals: 578
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3467
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32779
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3301
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 793
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.732099196646873e-5
allele num: 11452
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.03e0

QD
type: SiteQuality
SIO_000300: 1.058e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e0

DP
type: SiteQuality
SIO_000300: 1.759643e6

GenotypeQuality
all individuals: 819
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29432
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3247
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 2033
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variant carriers: 0

GenotypeQuality
all individuals: 425
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variant carriers: 0

GenotypeQuality
all individuals: 323
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variant carriers: 0

GenotypeQuality
all individuals: 265
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variant carriers: 0

GenotypeQuality
all individuals: 8045
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variant carriers: 0

GenotypeQuality
all individuals: 2610
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3285
bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517266492686776e-5
allele num: 65908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.731413001167769e-5
allele num: 10276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.181474480151229e-4
allele num: 8464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.934e1

DP
type: SiteQuality
SIO_000300: 1.703887e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.23e0

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

QD
type: SiteQuality
SIO_000300: 1.387e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.03e-1

FS
type: SiteQuality
SIO_000300: 2.144e0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.287e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

GenotypeQuality
all individuals: 1513
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28967
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2560
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7938
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3280
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 443
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.062925170068027e-4
allele num: 65856
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.947419668938656e-4
allele num: 10270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.44e-1

FS
type: SiteQuality
SIO_000300: 8.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

DP
type: SiteQuality
SIO_000300: 1.694432e6

VQSLOD
type: SiteQuality
SIO_000300: 4.0e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.972e0

QD
type: SiteQuality
SIO_000300: 1.371e1

GenotypeQuality
all individuals: 7918
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2538
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
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GenotypeQuality
all individuals: 28683
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variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65916
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.045994517209869e-4
allele num: 6566
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.82e-1

QD
type: SiteQuality
SIO_000300: 2.165e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.045e0

MQRankSum
type: SiteQuality
SIO_000300: 9.21e-1

DP
type: SiteQuality
SIO_000300: 1.686169e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1988
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3024
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 4.25e1
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GenotypeQuality
all individuals: 2386
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1927
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
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GenotypeQuality
all individuals: 3261
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 308
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.09979260705136e-5
allele num: 16394
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.709e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.704e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.226e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.893e0

DP
type: SiteQuality
SIO_000300: 1.658318e6

GenotypeQuality
all individuals: 1895
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.042472921990994e-5
allele num: 65736
num of homozygotes: 0

BaseQRankSum
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ClippingRankSum
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MQRankSum
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QD
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MQ
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DP
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VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.521236460995497e-5
allele num: 65736
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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FS
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQ
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BaseQRankSum
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MQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.523368472366096e-5
allele num: 65644
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South Asian
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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FS
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DP
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.532003554248246e-5
allele num: 65274
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11526
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6510
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QD
type: SiteQuality
SIO_000300: 1.19e1

MQRankSum
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FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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MQ
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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Other
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FS
type: SiteQuality
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ClippingRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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MQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 1.525320317266626e-4
allele num: 6556
num of homozygotes: 0

Latino
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European (Non-Finnish)
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allele num: 65586
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East Asian
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South Asian
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African
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Other
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QD
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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DP
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 1.73190162798753e-4
allele num: 11548
num of homozygotes: 0

European (Finnish)
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South Asian
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East Asian
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Other
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African
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European (Non-Finnish)
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allele num: 65670
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MQRankSum
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ClippingRankSum
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FS
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QD
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VQSLOD
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BaseQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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MQ
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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East Asian
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European (Non-Finnish)
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allele frequency: 1.520588771972508e-5
allele num: 65764
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
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DP
type: SiteQuality
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQ
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SIO_000300: 5.941e1

ReadPosRankSum
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FS
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MQRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15906
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.062994512989965e-5
allele num: 65974
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10206
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Latino
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 2.08e0

FS
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ClippingRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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MQ
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

Latino
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allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8622
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6578
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66014
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South Asian
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VQSLOD
type: SiteQuality
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DP
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BaseQRankSum
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 3.765e0

MQRankSum
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MQ
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QD
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InbreedingCoeff
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SIO_000300: -2.0e-4

ReadPosRankSum
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SIO_000300: 2.93e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10238
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South Asian
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allele count: 1
allele frequency: 6.249218847644044e-5
allele num: 16002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66064
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.341e0

ReadPosRankSum
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MQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: -8.191000000000001e-1

InbreedingCoeff
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SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.14e0

DP
type: SiteQuality
SIO_000300: 2.306598e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16016
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66068
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.12e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.754e0

DP
type: SiteQuality
SIO_000300: 2.307331e6

BaseQRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.539676775013619e-5
allele num: 66084
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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Latino
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VQSLOD
type: SiteQuality
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FS
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MQ
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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QD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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allele frequency: 4.877097151775263e-4
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 1.512813530604218e-5
allele num: 66102
num of homozygotes: 0

Latino
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allele frequency: 1.729804532087874e-4
allele num: 11562
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East Asian
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allele frequency: 1.159823706796567e-4
allele num: 8622
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South Asian
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allele frequency: 6.230529595015576e-5
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DP
type: SiteQuality
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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FS
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Non-Finnish)
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allele frequency: 9.074135688575663e-5
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European (Finnish)
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Other
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South Asian
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MQRankSum
type: SiteQuality
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FS
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ReadPosRankSum
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MQ
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DP
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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allele num: 66170
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South Asian
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European (Finnish)
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East Asian
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Latino
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MQ
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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DP
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QD
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FS
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MQRankSum
type: SiteQuality
SIO_000300: 7.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.683e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3946
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2538
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4247
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3650
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11426
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50993537476596e-5
allele num: 66228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 2.282e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.78e-1

DP
type: SiteQuality
SIO_000300: 2.315385e6

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

QD
type: SiteQuality
SIO_000300: 1.233e1

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 583
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2505
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3990
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11321
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27602
bin: 9.75e1
variant carriers: 1001

GenotypeQuality
all individuals: 3587
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 49
allele frequency: 4.236555421061733e-3
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 36
allele frequency: 5.45289306270827e-3
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 1.222222222222222e-2
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 23
allele frequency: 2.233877233877234e-3
allele num: 10296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 668
allele frequency: 1.008301886792453e-2
allele num: 66250
num of homozygotes: 4

South Asian
type: Population
allele count: 225
allele frequency: 1.387860843819393e-2
allele num: 16212
num of homozygotes: 3

BaseQRankSum
type: SiteQuality
SIO_000300: -8.1e-2

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 2.36668e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

FS
type: SiteQuality
SIO_000300: 1.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.7e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11421
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4234
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27408
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3884
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3599
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509069507741527e-5
allele num: 66266
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.867e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.093e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.097e0

QD
type: SiteQuality
SIO_000300: 1.208e1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e0

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 2.34466e6

VQSLOD
type: SiteQuality
SIO_000300: -6.669e-1

GenotypeQuality
all individuals: 4004
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4250
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11566
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2516
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27410
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3600
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16276
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.688044952528579e-5
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

FS
type: SiteQuality
SIO_000300: 1.097e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

QD
type: SiteQuality
SIO_000300: 1.16e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.38e-1

DP
type: SiteQuality
SIO_000300: 2.347482e6

VQSLOD
type: SiteQuality
SIO_000300: -3.234e-1

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2623
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3598
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11605
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.05501130369254e-4
allele num: 66350
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.228501228501228e-4
allele num: 16280
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 64
allele frequency: 6.199147617202635e-3
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.54e-1

FS
type: SiteQuality
SIO_000300: 5.21e-1

QD
type: SiteQuality
SIO_000300: 1.13e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 2.351153e6

VQSLOD
type: SiteQuality
SIO_000300: 3.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

GenotypeQuality
all individuals: 4003
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11517
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3599
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4254
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2516
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506205566935775e-5
allele num: 66392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

MQ
type: SiteQuality
SIO_000300: 5.833e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

DP
type: SiteQuality
SIO_000300: 2.349728e6

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

FS
type: SiteQuality
SIO_000300: 1.879e0

VQSLOD
type: SiteQuality
SIO_000300: 3.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

QD
type: SiteQuality
SIO_000300: 1.1e1

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3880
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11517
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4254
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27441
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2516
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3599
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4003
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.935733643050716e-4
allele num: 10332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.1e1

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 2.349728e6

FS
type: SiteQuality
SIO_000300: 1.879e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

MQ
type: SiteQuality
SIO_000300: 5.833e1

VQSLOD
type: SiteQuality
SIO_000300: 3.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27704
bin: 9.75e1
variant carriers: 361

GenotypeQuality
all individuals: 3581
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2495
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3977
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11445
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4214
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 276
allele frequency: 1.695331695331695e-2
allele num: 16280
num of homozygotes: 6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.935733643050716e-4
allele num: 10332
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.052222030088189e-4
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.333333333333334e-3
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 83
allele frequency: 1.25007530574131e-3
allele num: 66396
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.178e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

DP
type: SiteQuality
SIO_000300: 2.363484e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.89e-2

GenotypeQuality
all individuals: 532
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4205
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3582
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2608
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27569
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3855
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505978735580254e-5
allele num: 66402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.526e0

DP
type: SiteQuality
SIO_000300: 2.35583e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.82e-1

QD
type: SiteQuality
SIO_000300: 1.477e1

MQ
type: SiteQuality
SIO_000300: 5.83e1

FS
type: SiteQuality
SIO_000300: 3.241e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.33e-1

GenotypeQuality
all individuals: 2609
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506160195198361e-5
allele num: 66394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQRankSum
type: SiteQuality
SIO_000300: 5.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.12e-1

QD
type: SiteQuality
SIO_000300: 1.157e1

DP
type: SiteQuality
SIO_000300: 2.355504e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66394
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.165228113440197e-5
allele num: 16220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.12e-1

QD
type: SiteQuality
SIO_000300: 1.157e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

DP
type: SiteQuality
SIO_000300: 2.355504e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 128
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variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 19
allele frequency: 1.642461964038728e-3
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.259376412110258e-4
allele num: 66390
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.17283950617284e-5
allele num: 16200
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.317497103128621e-4
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 266
allele frequency: 2.57153905645785e-2
allele num: 10344
num of homozygotes: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.273e1

MQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 6.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

DP
type: SiteQuality
SIO_000300: 2.367889e6

GenotypeQuality
all individuals: 217
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 250
bin: 3.25e1
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GenotypeQuality
all individuals: 3847
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66366
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.215040397762585e-5
allele num: 16090
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.146e0

DP
type: SiteQuality
SIO_000300: 2.356809e6

MQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 3.235e0

QD
type: SiteQuality
SIO_000300: 1.222e1

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.205436518699334e-4
allele num: 66366
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.222e1

DP
type: SiteQuality
SIO_000300: 2.356809e6

FS
type: SiteQuality
SIO_000300: 3.235e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.146e0

MQRankSum
type: SiteQuality
SIO_000300: -1.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2573
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31696014828545e-4
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66314
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.223e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.973e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 2.352037e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

QD
type: SiteQuality
SIO_000300: 9.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.044862518089724e-5
allele num: 66336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15970
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.194e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: 6.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.69e-1

FS
type: SiteQuality
SIO_000300: 1.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

DP
type: SiteQuality
SIO_000300: 2.35146e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 1187
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GenotypeQuality
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GenotypeQuality
all individuals: 4039
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 92
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GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 107
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GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66322
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 2.34415e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.269e1

GenotypeQuality
all individuals: 1214
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 4036
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3840
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.518574486840448e-4
allele num: 15882
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.343306e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.82e-2

VQSLOD
type: SiteQuality
SIO_000300: -9.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

FS
type: SiteQuality
SIO_000300: 5.945e0

QD
type: SiteQuality
SIO_000300: 1.827e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15642
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.327233e6

VQSLOD
type: SiteQuality
SIO_000300: -7.131999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.091e1

MQ
type: SiteQuality
SIO_000300: 5.788e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510163399679845e-5
allele num: 66218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15534
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.087e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.338e1

FS
type: SiteQuality
SIO_000300: 7.646e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.884e0

MQRankSum
type: SiteQuality
SIO_000300: 1.99e0

DP
type: SiteQuality
SIO_000300: 2.324889e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2479
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GenotypeQuality
all individuals: 2556
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509798592867711e-5
allele num: 66234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.323815e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.385e1

FS
type: SiteQuality
SIO_000300: 2.086e0

MQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

GenotypeQuality
all individuals: 3821
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66234
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.456611570247934e-5
allele num: 15488
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

QD
type: SiteQuality
SIO_000300: 1.385e1

FS
type: SiteQuality
SIO_000300: 2.086e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.19e0

DP
type: SiteQuality
SIO_000300: 2.323815e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.529669334138608e-5
allele num: 66230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.479e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
SIO_000300: 6.55e-1

FS
type: SiteQuality
SIO_000300: 2.175e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.15e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

DP
type: SiteQuality
SIO_000300: 2.323587e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.329e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.703085581214826e-5
allele num: 10306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.038e0

MQRankSum
type: SiteQuality
SIO_000300: -9.26e-1

DP
type: SiteQuality
SIO_000300: 2.323061e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.182e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.782e0

QD
type: SiteQuality
SIO_000300: 1.171e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 88
allele frequency: 5.743375538441457e-3
allele num: 15322
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511213201958532e-5
allele num: 66172
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.252252252252252e-3
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.699321047526673e-5
allele num: 10310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

FS
type: SiteQuality
SIO_000300: 1.094e0

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3854
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3882
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27723
bin: 9.75e1
variant carriers: 13

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.53295457979511e-5
allele num: 66182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.209921355111918e-3
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.252252252252252e-3
allele num: 888
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 2.324405e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

FS
type: SiteQuality
SIO_000300: 5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

QD
type: SiteQuality
SIO_000300: 1.494e1

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34732
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 182
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8290
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2614
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3661
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2824
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.01e-1

QD
type: SiteQuality
SIO_000300: 1.416e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 4.261327e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2617
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3831
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2856
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10208
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.160670280926565e-5
allele num: 16232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.697e0

FS
type: SiteQuality
SIO_000300: 2.2286e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.482e0

DP
type: SiteQuality
SIO_000300: 4.282346e6

QD
type: SiteQuality
SIO_000300: 1.129e1