12-21014063-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014063
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014063
    reference: chr 12
allele count: 1
allele frequency: 8.548908304409527e-6
allele num: 116974
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2558G>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.472G>A
  hgvsp: ENSP00000442000.1:p.Val158Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.472G>A
  hgvsp: ENSP00000370956.3:p.Val158Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2558G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.472G>A
  hgvsp: ENSP00000441269.1:p.Val158Ile
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.472G>A
  hgvsp: ENSP00000261196.2:p.Val158Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.472G>A
  hgvsp: ENSP00000451758.1:p.Val158Ile
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27980
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7792
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3650
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val158Ile
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

12-21014072-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014072
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014072
    reference: chr 12
allele count: 1
allele frequency: 8.597269507204511e-6
allele num: 116316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2567G>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481G>A
  hgvsp: ENSP00000441269.1:p.Asp161Asn
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481G>A
  hgvsp: ENSP00000442000.1:p.Asp161Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481G>A
  hgvsp: ENSP00000451758.1:p.Asp161Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481G>A
  hgvsp: ENSP00000261196.2:p.Asp161Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481G>A
  hgvsp: ENSP00000370956.3:p.Asp161Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2567G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27441
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp161Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD

12-21014073-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014073
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014073
    reference: chr 12
allele count: 1
allele frequency: 8.604815254616483e-6
allele num: 116214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2568G>C
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2568G>C
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+1G>C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+1G>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+1G>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+1G>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+1G>C
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18601
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4951
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27240
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4557
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 3.25e1
  variant carriers: 0
hgvs: c.481+1G>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP

12-21014075-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014075
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014075
    reference: chr 12
allele count: 14
allele frequency: 1.207917033355766e-4
allele num: 115902
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2570A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+3A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+3A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+3A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2570A>G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+3A>G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+3A>G
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9602
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3270
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2476
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7793
  bin: 9.75e1
  variant carriers: 14
hgvs: c.481+3A>G
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

12-21014075-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014075
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014075
    reference: chr 12
allele count: 1
allele frequency: 8.627978809684043e-6
allele num: 115902
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+3A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2570A>T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+3A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+3A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+3A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+3A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2570A>T
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3270
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
hgvs: c.481+3A>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: A
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-21014079-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014079
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014079
    reference: chr 12
allele count: 1
allele frequency: 8.658158582832603e-6
allele num: 115498
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2574A>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+7A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+7A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+7A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2574A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+7A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+7A>G
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6792
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25659
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2302
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
hgvs: c.481+7A>G
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

12-21014080-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014080
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014080
    reference: chr 12
allele count: 1
allele frequency: 8.658608388459807e-6
allele num: 115492
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+8T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2575T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2575T>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+8T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+8T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+8T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+8T>G
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7783
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 7.5e0
  variant carriers: 0
hgvs: c.481+8T>G
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

12-21014081-TAATAGTGACAGTAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014081
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014067
    reference: chr 12
allele count: 18
allele frequency: 1.559494723709518e-4
allele num: 115422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17709
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9489
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4936
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7799
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 25603
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1074
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: TAATAGTGACAGTAA
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

12-21014084-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014084
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014084
    reference: chr 12
allele count: 1
allele frequency: 8.696559641006019e-6
allele num: 114988
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+12T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+12T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+12T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2579T>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2579T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+12T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+12T>G
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1068
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5953
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

12-21014087-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014087
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014087
    reference: chr 12
allele count: 2
allele frequency: 1.742190630498789e-5
allele num: 114798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2582T>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+15T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+15T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+15T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+15T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+15T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2582T>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9345
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4928
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16941
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6625
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23856
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

12-21014093-T-TGAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014093
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014136
    reference: chr 12
allele count: 47
allele frequency: 4.119626954631512e-4
allele num: 114088
alternate allele: TGAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9171
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8467
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16031
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2188
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6570
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3172
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 2
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum

12-21014094-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014094
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014094
    reference: chr 12
allele count: 7
allele frequency: 6.183854838424707e-5
allele num: 113198
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2589A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+22A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+22A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+22A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2589A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+22A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+22A>G
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16025
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6990
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8492
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2023
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21978
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3130
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP

12-21014095-A-AGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014095
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014097
    reference: chr 12
allele count: 7
allele frequency: 6.137336045451358e-5
allele num: 114056
alternate allele: AGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+23_481+24insGG
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+23_481+24insGG
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+23_481+24insGG
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+23_481+24insGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2590_359+2591insGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2590_359+2591insGG
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+23_481+24insGG
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 15875
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8297
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7152
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7774
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6663
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21698
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2190
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.25e1
  variant carriers: 2
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum

12-21014096-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014096
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014096
    reference: chr 12
allele count: 47
allele frequency: 4.157820240622788e-4
allele num: 113040
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2591A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+24A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+24A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2591A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+24A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+24A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+24A>G
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4903
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9075
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7912
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15517
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1677
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20656
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6254
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 2
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

12-21014100-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014100
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014100
    reference: chr 12
allele count: 3
allele frequency: 2.66132036974611e-5
allele num: 112726
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2595A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+28A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+28A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2595A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+28A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+28A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+28A>G
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4886
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7713
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7301
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6183
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1984
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/12-21014101-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014101
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014101
    reference: chr 12
allele count: 3
allele frequency: 2.642752691203157e-5
allele num: 113518
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+29A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+29A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2596A>C
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2596A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+29A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+29A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+29A>C
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7095
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7788
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2060
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19279
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6842
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3134
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

12-21014101-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014101
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014101
    reference: chr 12
allele count: 3
allele frequency: 2.642752691203157e-5
allele num: 113518
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+29A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+29A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+29A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+29A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2596A>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+29A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2596A>T
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4882
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8892
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7788
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6842
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19279
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6195
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2051
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

12-21014103-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014103
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014103
    reference: chr 12
allele count: 3
allele frequency: 2.671177989493367e-5
allele num: 112310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+31T>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+31T>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2598T>C
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+31T>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2598T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+31T>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+31T>C
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7873
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6626
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14033
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3078
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2406
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6751
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6079
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

12-21014110-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014110
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014110
    reference: chr 12
allele count: 1
allele frequency: 8.9850488786659e-6
allele num: 111296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2605T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+38T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+38T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2605T>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+38T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+38T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+38T>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8130
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2978
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15733
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7711
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1033
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5261
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3290
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/12-21014120-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014120
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014120
    reference: chr 12
allele count: 3
allele frequency: 2.749468436102353e-5
allele num: 109112
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2615A>C
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+48A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+48A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+48A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2615A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+48A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+48A>C
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9714
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8931
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4439
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4217
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1449
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8743
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2882
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4288
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4079
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

12-21014122-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014122
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014122
    reference: chr 12
allele count: 1
allele frequency: 9.180207472688882e-6
allele num: 108930
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+50T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+50T>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+50T>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+50T>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2617T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2617T>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+50T>A
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8903
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6910
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2337
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4388
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7710
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3077
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8234
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

12-21014123-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014123
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014123
    reference: chr 12
allele count: 1
allele frequency: 9.158683347681937e-6
allele num: 109186
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+51C>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2618C>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2618C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+51C>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+51C>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+51C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+51C>G
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8916
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7426
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4502
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4578
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

12-21014123-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21014123
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21014123
    reference: chr 12
allele count: 4
allele frequency: 3.663473339072775e-5
allele num: 109186
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.481+51C>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.481+51C>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.481+51C>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+2618C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+2618C>T
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.481+51C>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.481+51C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4356
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8916
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3632
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1267
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2353
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4578
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4170
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1789
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2441
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7426
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4808
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

12-21015299-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015299
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015299
    reference: chr 12
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3794A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-47A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-47A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3794A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-47A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-47A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-47A>G
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3031
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12678
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7700
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4328
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

12-21015302-GTTAAAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015302
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015296
    reference: chr 12
allele count: 1
allele frequency: 8.264599414866361e-6
allele num: 120998
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-39_482-34delAATTAA
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-39_482-34delAATTAA
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-39_482-34delAATTAA
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-39_482-34delAATTAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-39_482-34delAATTAA
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3028
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24886
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7689
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: GTTAAAA
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/12-21015307-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015307
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015307
    reference: chr 12
allele count: 35
allele frequency: 2.892179546506247e-4
allele num: 121016
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3802A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-39A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-39A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3802A>C
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-39A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-39A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-39A>C
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7064
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18568
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25131
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4317
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2420
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3023
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

12-21015312-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015312
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015312
    reference: chr 12
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-34A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3807A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-34A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3807A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-34A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-34A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-34A>G
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25328
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7709
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

12-21015316-TTAAAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015316
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015311
    reference: chr 12
allele count: 1
allele frequency: 8.257092842751923e-6
allele num: 121108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-25_482-21delGTAAA
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-25_482-21delGTAAA
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-25_482-21delGTAAA
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3816_359+3820delGTAAA
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3816_359+3820delGTAAA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-25_482-21delGTAAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-25_482-21delGTAAA
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12657
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3474
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: TTAAAG
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

12-21015326-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015326
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015326
    reference: chr 12
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-20A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-20A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-20A>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3821A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3821A>T
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-20A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-20A>T
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7715
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-21015328-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015328
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015328
    reference: chr 12
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3823A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-18A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-18A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3823A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-18A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-18A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-18A>G
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12655
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

12-21015331-CTCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015331
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015328
    reference: chr 12
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-13_482-11delCTT
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-13_482-11delCTT
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-13_482-11delCTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3828_359+3830delCTT
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3828_359+3830delCTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-13_482-11delCTT
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-13_482-11delCTT
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7718
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25565
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: CTCT
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

12-21015333-CTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015333
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015331
    reference: chr 12
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-12_482-11delTT
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3829_359+3830delTT
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-12_482-11delTT
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-12_482-11delTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-12_482-11delTT
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-12_482-11delTT
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3829_359+3830delTT
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25563
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: CTT
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

12-21015336-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015336
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015336
    reference: chr 12
allele count: 3
allele frequency: 2.471861971227527e-5
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-10G>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-10G>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-10G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-10G>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3831G>T
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-10G>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3831G>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6461
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

12-21015337-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015337
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015337
    reference: chr 12
allele count: 12
allele frequency: 9.887284951552304e-5
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-9T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3832T>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-9T>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-9T>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-9T>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3832T>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-9T>A
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

12-21015337-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015337
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015337
    reference: chr 12
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-9T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-9T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-9T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3832T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-9T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-9T>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3832T>G
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6461
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7721
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12654
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25574
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/12-21015340-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015340
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015340
    reference: chr 12
allele count: 14
allele frequency: 1.153440548378592e-4
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-6C>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-6C>A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-6C>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-6C>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-6C>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3835C>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3835C>A
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3475
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7724
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: c.482-6C>A
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

12-21015340-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015340
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015340
    reference: chr 12
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3835C>T
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-6C>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-6C>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-6C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3835C>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-6C>T
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-6C>T
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3475
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25584
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: c.482-6C>T
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

12-21015341-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015341
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015341
    reference: chr 12
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3836G>A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-5G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3836G>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-5G>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-5G>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-5G>A
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-5G>A
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1489
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: c.482-5G>A
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD

12-21015342-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015342
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015342
    reference: chr 12
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-4A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3837A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-4A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-4A>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-4A>G
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3837A>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-4A>G
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1489
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25596
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: c.482-4A>G
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/12-21015344-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015344
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015344
    reference: chr 12
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.482-2A>C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.482-2A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3839A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3839A>C
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.482-2A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.482-2A>C
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.482-2A>C
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1489
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12633
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: c.482-2A>C
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS

12-21015348-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015348
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015348
    reference: chr 12
allele count: 186
allele frequency: 1.53222617635429e-3
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.484T>G
  hgvsp: ENSP00000261196.2:p.Cys162Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3843T>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.484T>G
  hgvsp: ENSP00000442000.1:p.Cys162Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.484T>G
  hgvsp: ENSP00000370956.3:p.Cys162Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.484T>G
  hgvsp: ENSP00000451758.1:p.Cys162Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.484T>G
  hgvsp: ENSP00000441269.1:p.Cys162Gly
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3843T>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 9.75e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4609
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12654
  bin: 9.75e1
  variant carriers: 185
genotype quality: GenotypeQuality
  all individuals: 4311
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7728
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Cys162Gly
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS

12-21015351-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015351
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015351
    reference: chr 12
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3846G>T
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.487G>T
  hgvsp: ENSP00000261196.2:p.Val163Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.487G>T
  hgvsp: ENSP00000441269.1:p.Val163Leu
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.487G>T
  hgvsp: ENSP00000451758.1:p.Val163Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.487G>T
  hgvsp: ENSP00000442000.1:p.Val163Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.487G>T
  hgvsp: ENSP00000370956.3:p.Val163Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3846G>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3482
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val163Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

12-21015369-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015369
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015369
    reference: chr 12
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3864C>T
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.505C>T
  hgvsp: ENSP00000451758.1:p.His169Tyr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.505C>T
  hgvsp: ENSP00000442000.1:p.His169Tyr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3864C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.505C>T
  hgvsp: ENSP00000370956.3:p.His169Tyr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.505C>T
  hgvsp: ENSP00000261196.2:p.His169Tyr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.505C>T
  hgvsp: ENSP00000441269.1:p.His169Tyr
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25688
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4323
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His169Tyr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

12-21015371-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015371
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015369
    reference: chr 12
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.508_509delAT
  hgvsp: ENSP00000370956.3:p.Met170ValfsTer27
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3867_359+3868delAT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.508_509delAT
  hgvsp: ENSP00000442000.1:p.Met170ValfsTer27
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.508_509delAT
  hgvsp: ENSP00000441269.1:p.Met170ValfsTer27
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3867_359+3868delAT
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.508_509delAT
  hgvsp: ENSP00000451758.1:p.Met170ValfsTer27
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.508_509delAT
  hgvsp: ENSP00000261196.2:p.Met170ValfsTer27
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12495
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3042
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7763
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Met170ValfsTer27
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: CAT
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

12-21015372-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015372
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015372
    reference: chr 12
allele count: 9
allele frequency: 7.413386929375134e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.508A>G
  hgvsp: ENSP00000442000.1:p.Met170Val
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3867A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.508A>G
  hgvsp: ENSP00000451758.1:p.Met170Val
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.508A>G
  hgvsp: ENSP00000441269.1:p.Met170Val
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.508A>G
  hgvsp: ENSP00000261196.2:p.Met170Val
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.508A>G
  hgvsp: ENSP00000370956.3:p.Met170Val
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3867A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7077
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12493
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 7763
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25688
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met170Val
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-21015400-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015400
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015400
    reference: chr 12
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3895T>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3895T>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.536T>G
  hgvsp: ENSP00000451758.1:p.Met179Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.8T>G
  hgvsp: ENSP00000443225.1:p.Met3Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.536T>G
  hgvsp: ENSP00000261196.2:p.Met179Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.536T>G
  hgvsp: ENSP00000370956.3:p.Met179Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.536T>G
  hgvsp: ENSP00000441269.1:p.Met179Arg
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.536T>G
  hgvsp: ENSP00000442000.1:p.Met179Arg
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7761
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12486
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3484
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met179Arg
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ

12-21015401-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015401
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015401
    reference: chr 12
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.537G>T
  hgvsp: ENSP00000441269.1:p.Met179Ile
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3896G>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.537G>T
  hgvsp: ENSP00000261196.2:p.Met179Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.537G>T
  hgvsp: ENSP00000451758.1:p.Met179Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.537G>T
  hgvsp: ENSP00000370956.3:p.Met179Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.537G>T
  hgvsp: ENSP00000442000.1:p.Met179Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.9G>T
  hgvsp: ENSP00000443225.1:p.Met3Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3896G>T
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25693
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met179Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

12-21015405-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015405
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015405
    reference: chr 12
allele count: 3
allele frequency: 2.471169686985173e-5
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3900C>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.541C>G
  hgvsp: ENSP00000261196.2:p.Arg181Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.541C>G
  hgvsp: ENSP00000442000.1:p.Arg181Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.541C>G
  hgvsp: ENSP00000370956.3:p.Arg181Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.541C>G
  hgvsp: ENSP00000451758.1:p.Arg181Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.541C>G
  hgvsp: ENSP00000441269.1:p.Arg181Gly
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.13C>G
  hgvsp: ENSP00000443225.1:p.Arg5Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3900C>G
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18752
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7760
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg181Gly
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

12-21015405-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015405
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015405
    reference: chr 12
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.541C>T
  hgvsp: ENSP00000451758.1:p.Arg181Cys
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.541C>T
  hgvsp: ENSP00000441269.1:p.Arg181Cys
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.541C>T
  hgvsp: ENSP00000261196.2:p.Arg181Cys
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.541C>T
  hgvsp: ENSP00000370956.3:p.Arg181Cys
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.13C>T
  hgvsp: ENSP00000443225.1:p.Arg5Cys
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3900C>T
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.541C>T
  hgvsp: ENSP00000442000.1:p.Arg181Cys
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3900C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg181Cys
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

12-21015406-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015406
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015406
    reference: chr 12
allele count: 34
allele frequency: 2.800658978583196e-4
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.542G>A
  hgvsp: ENSP00000370956.3:p.Arg181His
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.542G>A
  hgvsp: ENSP00000441269.1:p.Arg181His
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.542G>A
  hgvsp: ENSP00000261196.2:p.Arg181His
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3901G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.542G>A
  hgvsp: ENSP00000451758.1:p.Arg181His
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.542G>A
  hgvsp: ENSP00000442000.1:p.Arg181His
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3901G>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.14G>A
  hgvsp: ENSP00000443225.1:p.Arg5His
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 18755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg181His
num of homozygotes: 1
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP

12-21015414-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015414
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015414
    reference: chr 12
allele count: 2
allele frequency: 1.647500741375333e-5
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.550G>A
  hgvsp: ENSP00000451758.1:p.Gly184Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.550G>A
  hgvsp: ENSP00000261196.2:p.Gly184Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.550G>A
  hgvsp: ENSP00000442000.1:p.Gly184Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.22G>A
  hgvsp: ENSP00000443225.1:p.Gly8Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3909G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.550G>A
  hgvsp: ENSP00000370956.3:p.Gly184Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.550G>A
  hgvsp: ENSP00000441269.1:p.Gly184Arg
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3909G>A
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3044
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3484
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12461
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Gly184Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

12-21015415-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015415
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015415
    reference: chr 12
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.551G>A
  hgvsp: ENSP00000370956.3:p.Gly184Glu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3910G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.551G>A
  hgvsp: ENSP00000451758.1:p.Gly184Glu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3910G>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.551G>A
  hgvsp: ENSP00000441269.1:p.Gly184Glu
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.551G>A
  hgvsp: ENSP00000442000.1:p.Gly184Glu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.23G>A
  hgvsp: ENSP00000443225.1:p.Gly8Glu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.551G>A
  hgvsp: ENSP00000261196.2:p.Gly184Glu
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18770
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly184Glu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/12-21015421-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015421
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015421
    reference: chr 12
allele count: 3
allele frequency: 2.471291826614165e-5
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.557C>A
  hgvsp: ENSP00000370956.3:p.Thr186Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.557C>A
  hgvsp: ENSP00000261196.2:p.Thr186Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3916C>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3916C>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.557C>A
  hgvsp: ENSP00000441269.1:p.Thr186Asn
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.557C>A
  hgvsp: ENSP00000451758.1:p.Thr186Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.557C>A
  hgvsp: ENSP00000442000.1:p.Thr186Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.29C>A
  hgvsp: ENSP00000443225.1:p.Thr10Asn
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4328
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7766
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr186Asn
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

12-21015424-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015424
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015424
    reference: chr 12
allele count: 5
allele frequency: 4.118819711023609e-5
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3919C>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.560C>G
  hgvsp: ENSP00000261196.2:p.Pro187Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.32C>G
  hgvsp: ENSP00000443225.1:p.Pro11Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.560C>G
  hgvsp: ENSP00000451758.1:p.Pro187Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3919C>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.560C>G
  hgvsp: ENSP00000370956.3:p.Pro187Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.560C>G
  hgvsp: ENSP00000442000.1:p.Pro187Arg
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.560C>G
  hgvsp: ENSP00000441269.1:p.Pro187Arg
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7764
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25691
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro187Arg
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

12-21015427-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015427
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015427
    reference: chr 12
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.563T>C
  hgvsp: ENSP00000370956.3:p.Ile188Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3922T>C
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.563T>C
  hgvsp: ENSP00000451758.1:p.Ile188Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.563T>C
  hgvsp: ENSP00000261196.2:p.Ile188Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.563T>C
  hgvsp: ENSP00000441269.1:p.Ile188Thr
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.35T>C
  hgvsp: ENSP00000443225.1:p.Ile12Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.563T>C
  hgvsp: ENSP00000442000.1:p.Ile188Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3922T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25699
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4327
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile188Thr
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

12-21015428-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015428
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015428
    reference: chr 12
allele count: 4
allele frequency: 3.295001482750667e-5
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3923A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.564A>G
  hgvsp: ENSP00000451758.1:p.Ile188Met
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.36A>G
  hgvsp: ENSP00000443225.1:p.Ile12Met
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.564A>G
  hgvsp: ENSP00000441269.1:p.Ile188Met
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3923A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.564A>G
  hgvsp: ENSP00000442000.1:p.Ile188Met
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.564A>G
  hgvsp: ENSP00000370956.3:p.Ile188Met
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.564A>G
  hgvsp: ENSP00000261196.2:p.Ile188Met
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 13197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7765
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile188Met
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

12-21015429-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015429
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015429
    reference: chr 12
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.565G>A
  hgvsp: ENSP00000441269.1:p.Val189Ile
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3924G>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.565G>A
  hgvsp: ENSP00000451758.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.565G>A
  hgvsp: ENSP00000442000.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3924G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.565G>A
  hgvsp: ENSP00000370956.3:p.Val189Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.565G>A
  hgvsp: ENSP00000261196.2:p.Val189Ile
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.37G>A
  hgvsp: ENSP00000443225.1:p.Val13Ile
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25692
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4327
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val189Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

12-21015435-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015435
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015435
    reference: chr 12
allele count: 2
allele frequency: 1.647527884409444e-5
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.43T>C
  hgvsp: ENST00000544370.1:c.43T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.571T>C
  hgvsp: ENST00000553473.1:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.571T>C
  hgvsp: ENST00000540853.1:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.571T>C
  hgvsp: ENST00000540229.1:c.571T>C(p.%3D)
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.571T>C
  hgvsp: ENST00000381545.3:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.571T>C
  hgvsp: ENST00000261196.2:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3930T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3930T>C
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu191Leu
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

12-21015440-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015440
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015440
    reference: chr 12
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.576G>A
  hgvsp: ENST00000540853.1:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.576G>A
  hgvsp: ENST00000553473.1:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.48G>A
  hgvsp: ENST00000544370.1:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.576G>A
  hgvsp: ENST00000261196.2:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3935G>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.576G>A
  hgvsp: ENST00000381545.3:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3935G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.576G>A
  hgvsp: ENST00000540229.1:c.576G>A(p.%3D)
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly192Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

12-21015441-ATTTCATACATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015441
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015430
    reference: chr 12
allele count: 4
allele frequency: 3.295327225993541e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsp: ENSP00000441269.1:p.Ile193ArgfsTer2
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsp: ENSP00000261196.2:p.Ile193ArgfsTer2
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsp: ENSP00000442000.1:p.Ile193ArgfsTer2
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsp: ENSP00000451758.1:p.Ile193ArgfsTer2
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsp: ENSP00000370956.3:p.Ile193ArgfsTer2
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.50_60delTTTCATACATT
  hgvsp: ENSP00000443225.1:p.Ile17ArgfsTer2
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25681
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile193ArgfsTer2
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: ATTTCATACATT
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

12-21015445-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015445
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015445
    reference: chr 12
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.581C>T
  hgvsp: ENSP00000261196.2:p.Ser194Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3940C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.581C>T
  hgvsp: ENSP00000441269.1:p.Ser194Leu
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.53C>T
  hgvsp: ENSP00000443225.1:p.Ser18Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.581C>T
  hgvsp: ENSP00000370956.3:p.Ser194Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3940C>T
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.581C>T
  hgvsp: ENSP00000442000.1:p.Ser194Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.581C>T
  hgvsp: ENSP00000451758.1:p.Ser194Leu
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser194Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/12-21015448-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015448
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015448
    reference: chr 12
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.584A>C
  hgvsp: ENSP00000451758.1:p.Tyr195Ser
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3943A>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.584A>C
  hgvsp: ENSP00000441269.1:p.Tyr195Ser
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.56A>C
  hgvsp: ENSP00000443225.1:p.Tyr19Ser
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3943A>C
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.584A>C
  hgvsp: ENSP00000261196.2:p.Tyr195Ser
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.584A>C
  hgvsp: ENSP00000370956.3:p.Tyr195Ser
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.584A>C
  hgvsp: ENSP00000442000.1:p.Tyr195Ser
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4323
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr195Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

12-21015450-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015450
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015450
    reference: chr 12
allele count: 3
allele frequency: 2.471658317954126e-5
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3945A>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.586A>G
  hgvsp: ENSP00000370956.3:p.Ile196Val
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.586A>G
  hgvsp: ENSP00000442000.1:p.Ile196Val
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.586A>G
  hgvsp: ENSP00000441269.1:p.Ile196Val
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.58A>G
  hgvsp: ENSP00000443225.1:p.Ile20Val
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.586A>G
  hgvsp: ENSP00000451758.1:p.Ile196Val
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.586A>G
  hgvsp: ENSP00000261196.2:p.Ile196Val
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3945A>G
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4323
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25671
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile196Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

12-21015451-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015451
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015451
    reference: chr 12
allele count: 3
allele frequency: 2.471821237888076e-5
allele num: 121368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.587T>C
  hgvsp: ENSP00000261196.2:p.Ile196Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.59T>C
  hgvsp: ENSP00000443225.1:p.Ile20Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.587T>C
  hgvsp: ENSP00000441269.1:p.Ile196Thr
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3946T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.587T>C
  hgvsp: ENSP00000442000.1:p.Ile196Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.587T>C
  hgvsp: ENSP00000451758.1:p.Ile196Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.587T>C
  hgvsp: ENSP00000370956.3:p.Ile196Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3946T>C
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile196Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ

12-21015456-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015456
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015456
    reference: chr 12
allele count: 10
allele frequency: 8.239675686364985e-5
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3951G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.592G>A
  hgvsp: ENSP00000370956.3:p.Asp198Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.592G>A
  hgvsp: ENSP00000451758.1:p.Asp198Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3951G>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.592G>A
  hgvsp: ENSP00000442000.1:p.Asp198Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.592G>A
  hgvsp: ENSP00000261196.2:p.Asp198Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.64G>A
  hgvsp: ENSP00000443225.1:p.Asp22Asn
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.592G>A
  hgvsp: ENSP00000441269.1:p.Asp198Asn
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4615
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp198Asn
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

12-21015457-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015457
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015457
    reference: chr 12
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.65A>G
  hgvsp: ENSP00000443225.1:p.Asp22Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.593A>G
  hgvsp: ENSP00000261196.2:p.Asp198Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.593A>G
  hgvsp: ENSP00000442000.1:p.Asp198Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.593A>G
  hgvsp: ENSP00000370956.3:p.Asp198Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.593A>G
  hgvsp: ENSP00000441269.1:p.Asp198Gly
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3952A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.593A>G
  hgvsp: ENSP00000451758.1:p.Asp198Gly
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3952A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7769
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp198Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

12-21015461-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015461
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015461
    reference: chr 12
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.69T>A
  hgvsp: ENSP00000443225.1:p.Phe23Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3956T>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.597T>A
  hgvsp: ENSP00000370956.3:p.Phe199Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.597T>A
  hgvsp: ENSP00000451758.1:p.Phe199Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.597T>A
  hgvsp: ENSP00000261196.2:p.Phe199Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.597T>A
  hgvsp: ENSP00000442000.1:p.Phe199Leu
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3956T>A
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.597T>A
  hgvsp: ENSP00000441269.1:p.Phe199Leu
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Phe199Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

12-21015462-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015462
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015462
    reference: chr 12
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.598G>A
  hgvsp: ENSP00000370956.3:p.Ala200Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.598G>A
  hgvsp: ENSP00000441269.1:p.Ala200Thr
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3957G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.70G>A
  hgvsp: ENSP00000443225.1:p.Ala24Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.598G>A
  hgvsp: ENSP00000261196.2:p.Ala200Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.598G>A
  hgvsp: ENSP00000451758.1:p.Ala200Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.598G>A
  hgvsp: ENSP00000442000.1:p.Ala200Thr
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3957G>A
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18771
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12432
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3043
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala200Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD

12-21015464-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015464
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015464
    reference: chr 12
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.600A>G
  hgvsp: ENST00000540229.1:c.600A>G(p.%3D)
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.600A>G
  hgvsp: ENST00000381545.3:c.600A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.600A>G
  hgvsp: ENST00000553473.1:c.600A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3959A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.600A>G
  hgvsp: ENST00000261196.2:c.600A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.600A>G
  hgvsp: ENST00000540853.1:c.600A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3959A>G
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.72A>G
  hgvsp: ENST00000544370.1:c.72A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4319
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7765
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala200Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

12-21015465-AAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015465
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015462
    reference: chr 12
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.605_607delAAG
  hgvsp: ENSP00000370956.3:p.Glu202del
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3964_359+3966delAAG
  variant of: http://identifiers.org/hgnc/32934
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.605_607delAAG
  hgvsp: ENSP00000441269.1:p.Glu202del
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.605_607delAAG
  hgvsp: ENSP00000261196.2:p.Glu202del
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.605_607delAAG
  hgvsp: ENSP00000451758.1:p.Glu202del
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3964_359+3966delAAG
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.605_607delAAG
  hgvsp: ENSP00000442000.1:p.Glu202del
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.77_79delAAG
  hgvsp: ENSP00000443225.1:p.Glu26del
  variant of: http://identifiers.org/hgnc/10961
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18769
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4319
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu202del
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: AAAG
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

12-21015467-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015467
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 21015467
    reference: chr 12
allele count: 3
allele frequency: 2.472473132458627e-5
allele num: 121336
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000442000
  ensembl transcript: ENST00000540853
  gene symbol: SLCO1B3
  hgvsc: ENST00000540853.1:c.603A>G
  hgvsp: ENST00000540853.1:c.603A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000261196
  ensembl transcript: ENST00000261196
  gene symbol: SLCO1B3
  hgvsc: ENST00000261196.2:c.603A>G
  hgvsp: ENST00000261196.2:c.603A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000441269
  ensembl transcript: ENST00000540229
  gene symbol: LST3
  hgvsc: ENST00000540229.1:c.603A>G
  hgvsp: ENST00000540229.1:c.603A>G(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000451758
  ensembl transcript: ENST00000553473
  gene symbol: SLCO1B3
  hgvsc: ENST00000553473.1:c.603A>G
  hgvsp: ENST00000553473.1:c.603A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000370956
  ensembl transcript: ENST00000381545
  gene symbol: SLCO1B3
  hgvsc: ENST00000381545.3:c.603A>G
  hgvsp: ENST00000381545.3:c.603A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000111700
  ensembl protein: ENSP00000443225
  ensembl transcript: ENST00000544370
  gene symbol: SLCO1B3
  hgvsc: ENST00000544370.1:c.75A>G
  hgvsp: ENST00000544370.1:c.75A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/10961
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000257046
  ensembl protein: ENSP00000370952
  ensembl transcript: ENST00000381541
  gene symbol: LST3
  hgvsc: ENST00000381541.3:c.359+3962A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000205754
  ensembl protein: ENSP00000452013
  ensembl transcript: ENST00000554957
  gene symbol: SLCO1B7
  hgvsc: ENST00000554957.1:c.359+3962A>G
  variant of: http://identifiers.org/hgnc/32934
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6420
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7763
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys201Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

12-21015472-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21015472
    reference: chr 12
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: T
canonical: true
consequence: missense
filter: PASS
hgvs: p.Gly203Val
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 1076
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3319
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7142
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.042535446205171e-4
allele num: 9592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15032
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

DP
type: SiteQuality
SIO_000300: 1.868027e6

FS
type: SiteQuality
SIO_000300: 2.363e0

VQSLOD
type: SiteQuality
SIO_000300: -1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.67e-1

QD
type: SiteQuality
SIO_000300: 5.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 325
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6971
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4411
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2334
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2480
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7789
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546216408448527e-5
allele num: 64674
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.57e-1

FS
type: SiteQuality
SIO_000300: 7.4e-1

DP
type: SiteQuality
SIO_000300: 1.848847e6

QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

GenotypeQuality
all individuals: 2325
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6961
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7789
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1069
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3285
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547269070091289e-5
allele num: 64630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.903e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.335e0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

QD
type: SiteQuality
SIO_000300: 8.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

FS
type: SiteQuality
SIO_000300: 2.224e0

DP
type: SiteQuality
SIO_000300: 1.845212e6

GenotypeQuality
all individuals: 4929
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26517
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.513703443429375e-4
allele num: 11384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.549907005579665e-4
allele num: 64520
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

FS
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.835782e6

QD
type: SiteQuality
SIO_000300: 1.263e1

GenotypeQuality
all individuals: 4929
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26517
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2476
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.048657718120805e-4
allele num: 9536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.22e0

QD
type: SiteQuality
SIO_000300: 1.263e1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 1.835782e6

MQRankSum
type: SiteQuality
SIO_000300: 3.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 7784
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2472
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64338
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.014590347923682e-5
allele num: 14256
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.202e0

FS
type: SiteQuality
SIO_000300: 1.1411e1

MQ
type: SiteQuality
SIO_000300: 5.92e1

VQSLOD
type: SiteQuality
SIO_000300: -1.623e0

DP
type: SiteQuality
SIO_000300: 1.821498e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

QD
type: SiteQuality
SIO_000300: 1.441e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.16e0

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2301
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
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GenotypeQuality
all individuals: 25829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6787
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3256
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5424
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64338
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.017543859649122e-5
allele num: 14250
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.46e-1

DP
type: SiteQuality
SIO_000300: 1.821433e6

QD
type: SiteQuality
SIO_000300: 8.76e0

MQRankSum
type: SiteQuality
SIO_000300: -1.165e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

GenotypeQuality
all individuals: 5531
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6771
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2296
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3254
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 18
allele frequency: 2.098880597014925e-3
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14218
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64302
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.357e1

QD
type: SiteQuality
SIO_000300: 2.6e0

DP
type: SiteQuality
SIO_000300: 1.818389e6

MQRankSum
type: SiteQuality
SIO_000300: -4.083e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

MQ
type: SiteQuality
SIO_000300: 5.246e1

VQSLOD
type: SiteQuality
SIO_000300: -1.321e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7781
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24195
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6670
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variant carriers: 0

GenotypeQuality
all individuals: 2468
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2276
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.558409175913228e-5
allele num: 64168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14018
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9462
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.801891e6

MQ
type: SiteQuality
SIO_000300: 5.938e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.605e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 1.174e0

QD
type: SiteQuality
SIO_000300: 1.556e1

GenotypeQuality
all individuals: 1065
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1700
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3227
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variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7780
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 254
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variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64088
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.113718030014796e-4
allele num: 9462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

DP
type: SiteQuality
SIO_000300: 1.794847e6

QD
type: SiteQuality
SIO_000300: 9.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

GenotypeQuality
all individuals: 599
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
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variant carriers: 0

GenotypeQuality
all individuals: 7811
bin: 9.75e1
variant carriers: 43

GenotypeQuality
all individuals: 21688
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6385
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1058
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.578754578754579e-4
allele num: 6552
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.369196757553427e-5
allele num: 13570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.566416040100251e-5
allele num: 63840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9396
num of homozygotes: 0

East Asian
type: Population
allele count: 41
allele frequency: 4.821260583254939e-3
allele num: 8504
num of homozygotes: 2

Other
type: Population
allele count: 1
allele frequency: 1.16822429906542e-3
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

DP
type: SiteQuality
SIO_000300: 1.768807e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.45e-1

FS
type: SiteQuality
SIO_000300: 3.5968e1

MQRankSum
type: SiteQuality
SIO_000300: -4.322e0

VQSLOD
type: SiteQuality
SIO_000300: -4.156e0

QD
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.22e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

GenotypeQuality
all individuals: 1239
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7719
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2409
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variant carriers: 0

GenotypeQuality
all individuals: 586
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variant carriers: 0

GenotypeQuality
all individuals: 1655
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1049
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567889620570712e-5
allele num: 63780
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.063603488619443e-4
allele num: 9402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 5.154639175257732e-4
allele num: 7760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.383343177790904e-5
allele num: 13544
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.917e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.755e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

MQ
type: SiteQuality
SIO_000300: 5.631e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 2.0337e1

QD
type: SiteQuality
SIO_000300: 3.26e0

MQRankSum
type: SiteQuality
SIO_000300: -2.331e0

DP
type: SiteQuality
SIO_000300: 1.76803e6

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 3173
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 3.75e1
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GenotypeQuality
all individuals: 1062
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 4.75e1
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GenotypeQuality
all individuals: 1691
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GenotypeQuality
all individuals: 6363
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variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 176
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.064056182166418e-4
allele num: 9398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.372456502506635e-5
allele num: 13564
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.711425206124853e-4
allele num: 8490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.566563273490616e-5
allele num: 63834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.763618e6

MQRankSum
type: SiteQuality
SIO_000300: -2.35e0

MQ
type: SiteQuality
SIO_000300: 5.607e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

VQSLOD
type: SiteQuality
SIO_000300: -2.896e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

FS
type: SiteQuality
SIO_000300: 2.9126e1

QD
type: SiteQuality
SIO_000300: 3.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.915e0

GenotypeQuality
all individuals: 685
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1540
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2405
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variant carriers: 0

GenotypeQuality
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variant carriers: 43

GenotypeQuality
all individuals: 2164
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GenotypeQuality
all individuals: 360
bin: 4.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9386
num of homozygotes: 0

East Asian
type: Population
allele count: 41
allele frequency: 5.240286298568507e-3
allele num: 7824
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569760140650509e-5
allele num: 63704
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.176470588235294e-3
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.618226600985221e-4
allele num: 6496
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.448234768359899e-5
allele num: 13426
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.163e1

MQRankSum
type: SiteQuality
SIO_000300: -4.675e0

DP
type: SiteQuality
SIO_000300: 1.754862e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

FS
type: SiteQuality
SIO_000300: 4.0888e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.095e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.83e0

QD
type: SiteQuality
SIO_000300: 1.1e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19715
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variant carriers: 1

GenotypeQuality
all individuals: 7716
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.571931589537223e-5
allele num: 63616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13280
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.569373072970195e-4
allele num: 7784
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.097e0

MQRankSum
type: SiteQuality
SIO_000300: -2.336e0

FS
type: SiteQuality
SIO_000300: 2.0157e1

DP
type: SiteQuality
SIO_000300: 1.739274e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.869e0

MQ
type: SiteQuality
SIO_000300: 5.695e1

QD
type: SiteQuality
SIO_000300: 4.98e0

GenotypeQuality
all individuals: 2051
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2838
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2417
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GenotypeQuality
all individuals: 799
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.34852043212776e-4
allele num: 8516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.571338780641106e-5
allele num: 63640
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

FS
type: SiteQuality
SIO_000300: 3.086e0

MQRankSum
type: SiteQuality
SIO_000300: -1.736e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

QD
type: SiteQuality
SIO_000300: 9.15e0

DP
type: SiteQuality
SIO_000300: 1.733827e6

MQ
type: SiteQuality
SIO_000300: 5.764e1

VQSLOD
type: SiteQuality
SIO_000300: -2.544e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.204e0

GenotypeQuality
all individuals: 2417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2167
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3134
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variant carriers: 0

GenotypeQuality
all individuals: 563
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GenotypeQuality
all individuals: 7755
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.643171806167401e-4
allele num: 11350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13256
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.736e0

MQ
type: SiteQuality
SIO_000300: 5.764e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.204e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.733827e6

FS
type: SiteQuality
SIO_000300: 3.086e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.38e-1

QD
type: SiteQuality
SIO_000300: 9.15e0

VQSLOD
type: SiteQuality
SIO_000300: -2.544e0

GenotypeQuality
all individuals: 2133
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
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variant carriers: 0

GenotypeQuality
all individuals: 400
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variant carriers: 0

GenotypeQuality
all individuals: 7716
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variant carriers: 2

GenotypeQuality
all individuals: 2390
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GenotypeQuality
all individuals: 1040
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GenotypeQuality
all individuals: 753
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variant carriers: 0

GenotypeQuality
all individuals: 1676
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GenotypeQuality
all individuals: 17829
bin: 6.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575845441079139e-5
allele num: 63458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13064
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.56871307474955e-4
allele num: 7786
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.725e1

QD
type: SiteQuality
SIO_000300: 6.56e0

VQSLOD
type: SiteQuality
SIO_000300: -4.285e0

FS
type: SiteQuality
SIO_000300: 2.556e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.256e0

MQRankSum
type: SiteQuality
SIO_000300: -2.302e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

DP
type: SiteQuality
SIO_000300: 1.719121e6

GenotypeQuality
all individuals: 410
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3667
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GenotypeQuality
all individuals: 6628
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9232
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.926442612555485e-5
allele num: 12616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63058
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.19e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.23e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

QD
type: SiteQuality
SIO_000300: 1.072e1

DP
type: SiteQuality
SIO_000300: 1.682917e6

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 458
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GenotypeQuality
all individuals: 2721
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.826876045823143e-5
allele num: 62152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11704
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7702
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.57e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-1

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

DP
type: SiteQuality
SIO_000300: 1.639809e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1665
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GenotypeQuality
all individuals: 2400
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variant carriers: 0

GenotypeQuality
all individuals: 1814
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9052
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South Asian
type: Population
allele count: 1
allele frequency: 8.570449091532397e-5
allele num: 11668
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.81e-1

MQ
type: SiteQuality
SIO_000300: 5.869e1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.01e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.63768e6

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1027
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11188
num of homozygotes: 0

Other
type: Population
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allele num: 812
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.618856439810918e-5
allele num: 61772
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

FS
type: SiteQuality
SIO_000300: 1.278e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.148e0

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.636769e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 339
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2859
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.464403256539061e-4
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.278e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.152e1

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.148e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

DP
type: SiteQuality
SIO_000300: 1.636769e6

GenotypeQuality
all individuals: 142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3477
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.893153937475267e-5
allele num: 10108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.92e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.84e-2

DP
type: SiteQuality
SIO_000300: 2.252175e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 3.055e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.67e0

QD
type: SiteQuality
SIO_000300: 1.536e1

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 68
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GenotypeQuality
all individuals: 4319
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.25339e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.553e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 4.833e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.883e0

QD
type: SiteQuality
SIO_000300: 8.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 35

GenotypeQuality
all individuals: 1488
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variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 4.049797510124494e-4
allele num: 66670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.210653753026634e-3
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.662e1

VQSLOD
type: SiteQuality
SIO_000300: 4.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

DP
type: SiteQuality
SIO_000300: 2.255702e6

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 12655
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.036e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.892e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.12e-1

QD
type: SiteQuality
SIO_000300: 1.487e1

DP
type: SiteQuality
SIO_000300: 2.255582e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 3028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1488
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.256318e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.87e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.476e0

FS
type: SiteQuality
SIO_000300: 1.5641e1

MQRankSum
type: SiteQuality
SIO_000300: -5.994e0

MQ
type: SiteQuality
SIO_000300: 5.433e1

QD
type: SiteQuality
SIO_000300: 1.342e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.62e-1

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
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GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4315
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3474
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.2585e6

FS
type: SiteQuality
SIO_000300: 8.315e0

MQRankSum
type: SiteQuality
SIO_000300: -5.77e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.336e1

VQSLOD
type: SiteQuality
SIO_000300: 1.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.81e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1488
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

South Asian
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allele count: 0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.928e1

FS
type: SiteQuality
SIO_000300: 9.617000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.013e0

MQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

QD
type: SiteQuality
SIO_000300: 1.196e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.054e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.25863e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.34e-1

FS
type: SiteQuality
SIO_000300: 5.674e0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.258795e6

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.63948332369385e-5
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.079e1

FS
type: SiteQuality
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QD
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SIO_000300: 1.51e1

DP
type: SiteQuality
SIO_000300: 2.258843e6

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.18e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.808e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1488
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GenotypeQuality
all individuals: 0
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997332374186974e-5
allele num: 66726
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 9.635767970707265e-5
allele num: 10378
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East Asian
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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South Asian
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Other
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African
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allele frequency: 9.633911368015414e-5
allele num: 10380
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Latino
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allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.049066330965441e-4
allele num: 66726
num of homozygotes: 0

MQ
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DP
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66726
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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East Asian
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South Asian
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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DP
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ClippingRankSum
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MQ
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MQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 10
allele frequency: 1.498531439189594e-4
allele num: 66732
num of homozygotes: 0

South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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DP
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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MQ
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SIO_000300: 5.979e1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 9.632055480639569e-5
allele num: 10382
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

ClippingRankSum
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DP
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SIO_000300: 2.260267e6

MQRankSum
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MQ
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
type: SiteQuality
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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South Asian
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allele num: 16512
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European (Finnish)
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European (Non-Finnish)
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allele count: 0
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Other
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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MQ
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FS
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
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Other
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East Asian
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Latino
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South Asian
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InbreedingCoeff
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ClippingRankSum
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FS
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QD
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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East Asian
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African
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European (Non-Finnish)
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Latino
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InbreedingCoeff
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DP
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VQSLOD
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MQ
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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QD
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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allele num: 66736
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European (Finnish)
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East Asian
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African
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Latino
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South Asian
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MQRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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InbreedingCoeff
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MQ
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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Latino
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South Asian
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European (Non-Finnish)
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Other
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InbreedingCoeff
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FS
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VQSLOD
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ClippingRankSum
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MQ
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QD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 1.905e0

MQ
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BaseQRankSum
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SIO_000300: -5.563e0

InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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SIO_000300: 5.3e-2

QD
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ClippingRankSum
type: SiteQuality
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.066e1

DP
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ReadPosRankSum
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SIO_000300: 8.86e-1

InbreedingCoeff
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VQSLOD
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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MQRankSum
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SIO_000300: -4.37e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 4.844961240310077e-4
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQ
type: SiteQuality
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DP
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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QD
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SIO_000300: 1.02e1

FS
type: SiteQuality
SIO_000300: 5.39e-1

MQRankSum
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SIO_000300: 4.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
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DP
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.26e-1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.6252e1

MQ
type: SiteQuality
SIO_000300: 5.922e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-1

BaseQRankSum
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InbreedingCoeff
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SIO_000300: 0.0e0

MQRankSum
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QD
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FS
type: SiteQuality
SIO_000300: 1.766e0

DP
type: SiteQuality
SIO_000300: 2.254534e6

VQSLOD
type: SiteQuality
SIO_000300: 8.75e-1

MQ
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SIO_000300: 5.947e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.254688e6

BaseQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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MQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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MQ
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QD
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VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 6
allele frequency: 5.183137525915688e-4
allele num: 11576
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 26
allele frequency: 3.895948213857588e-4
allele num: 66736
num of homozygotes: 1

BaseQRankSum
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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QD
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VQSLOD
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MQ
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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allele frequency: 2.996973057212216e-5
allele num: 66734
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African
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
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European (Non-Finnish)
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allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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African
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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VQSLOD
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QD
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DP
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 3.467406380027739e-4
allele num: 8652
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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ReadPosRankSum
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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MQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 7.49265719594797e-5
allele num: 66732
num of homozygotes: 0

MQ
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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DP
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FS
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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European (Finnish)
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BaseQRankSum
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DP
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MQ
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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VQSLOD
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FS
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16512
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East Asian
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 9.611687812379854e-5
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European (Non-Finnish)
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allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
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Other
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VQSLOD
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ClippingRankSum
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FS
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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MQ
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QD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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East Asian
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African
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Other
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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ReadPosRankSum
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FS
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MQ
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QD
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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European (Non-Finnish)
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African
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Latino
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European (Finnish)
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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FS
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MQ
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QD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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Other
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South Asian
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African
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Latino
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European (Finnish)
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FS
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DP
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MQRankSum
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MQ
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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South Asian
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MQ
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MQRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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ClippingRankSum
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ReadPosRankSum
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MQ
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FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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African
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allele frequency: 9.617234083477592e-5
allele num: 10398
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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MQRankSum
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VQSLOD
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MQ
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DP
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InbreedingCoeff
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ClippingRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 3.467406380027739e-4
allele num: 8652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 7.92e-1

MQ
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QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 2.6e-2

FS
type: SiteQuality
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ClippingRankSum
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.885170225043277e-4
allele num: 10398
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.252724e6

ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 2.063e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 6
allele frequency: 6.934812760055479e-4
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

FS
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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ClippingRankSum
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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QD
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
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African
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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Other
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ReadPosRankSum
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FS
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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VQSLOD
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MQRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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allele num: 66716
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Other
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South Asian
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VQSLOD
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DP
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
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East Asian
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South Asian
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African
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Other
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European (Non-Finnish)
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Latino
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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MQ
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BaseQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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Other
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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MQRankSum
type: SiteQuality
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QD
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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FS
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ReadPosRankSum
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3043
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25644
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7766
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.251384e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.16e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

MQ
type: SiteQuality
SIO_000300: 5.609e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.82e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.675e0

QD
type: SiteQuality
SIO_000300: 1.517e1

GenotypeQuality
all individuals: 25641
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12434
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2423
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3481
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3043
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.886280546469117e-4
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.053e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.78e-2

MQ
type: SiteQuality
SIO_000300: 5.929e1

DP
type: SiteQuality
SIO_000300: 2.251457e6

VQSLOD
type: SiteQuality
SIO_000300: 5.25e-1

QD
type: SiteQuality
SIO_000300: 1.386e1