16-24895426-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895426
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895426
    reference: chr 16
allele count: 2
allele frequency: 1.651936896010573e-5
allele num: 121070
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.446T>C
  hgvsp: ENSP00000456376.1:p.Ile149Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.315T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.428T>C
  hgvsp: ENSP00000441384.1:p.Ile143Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.638T>C
  hgvsp: ENSP00000289932.3:p.Ile213Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.428T>C
  hgvsp: ENSP00000456234.1:p.Ile143Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*650T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.446T>C
  hgvsp: ENSP00000457179.1:p.Ile149Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.533T>C
  hgvsp: ENSP00000454401.1:p.Ile178Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.533T>C
  hgvsp: ENSP00000416782.2:p.Ile178Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.446T>C
  hgvsp: ENSP00000389606.2:p.Ile149Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.446T>C
  hgvsp: ENSP00000441018.1:p.Ile149Thr
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile213Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

16-24895433-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895433
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895433
    reference: chr 16
allele count: 1
allele frequency: 8.262414277451872e-6
allele num: 121030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.453G>A
  hgvsp: ENST00000449109.2:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*657G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.435G>A
  hgvsp: ENST00000568579.1:c.435G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.453G>A
  hgvsp: ENST00000569071.1:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.453G>A
  hgvsp: ENST00000565769.1:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.435G>A
  hgvsp: ENST00000545376.1:c.435G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.540G>A
  hgvsp: ENST00000567758.1:c.540G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.645G>A
  hgvsp: ENST00000347898.3:c.645G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.322G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.540G>A
  hgvsp: ENST00000424767.2:c.540G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.453G>A
  hgvsp: ENST00000539472.1:c.453G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala215Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP

16-24895434-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895434
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895434
    reference: chr 16
allele count: 6
allele frequency: 4.9573666468372e-5
allele num: 121032
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.436C>G
  hgvsp: ENSP00000441384.1:p.Leu146Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.436C>G
  hgvsp: ENSP00000456234.1:p.Leu146Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.454C>G
  hgvsp: ENSP00000456376.1:p.Leu152Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.646C>G
  hgvsp: ENSP00000289932.3:p.Leu216Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.454C>G
  hgvsp: ENSP00000441018.1:p.Leu152Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.541C>G
  hgvsp: ENSP00000416782.2:p.Leu181Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.454C>G
  hgvsp: ENSP00000457179.1:p.Leu152Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.454C>G
  hgvsp: ENSP00000389606.2:p.Leu152Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.323C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.541C>G
  hgvsp: ENSP00000454401.1:p.Leu181Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*658C>G
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5040
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5415
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu216Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-24895436-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895436
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895436
    reference: chr 16
allele count: 3
allele frequency: 2.478970070568015e-5
allele num: 121018
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.648C>T
  hgvsp: ENST00000347898.3:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.456C>T
  hgvsp: ENST00000565769.1:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.543C>T
  hgvsp: ENST00000424767.2:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.456C>T
  hgvsp: ENST00000449109.2:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.325C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.438C>T
  hgvsp: ENST00000568579.1:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.438C>T
  hgvsp: ENST00000545376.1:c.438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.543C>T
  hgvsp: ENST00000567758.1:c.543C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.456C>T
  hgvsp: ENST00000569071.1:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*660C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.456C>T
  hgvsp: ENST00000539472.1:c.456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5040
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu216Leu
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD

16-24895440-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895440
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895440
    reference: chr 16
allele count: 1
allele frequency: 8.264189613566494e-6
allele num: 121004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.460T>A
  hgvsp: ENSP00000389606.2:p.Leu154Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.460T>A
  hgvsp: ENSP00000456376.1:p.Leu154Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.460T>A
  hgvsp: ENSP00000441018.1:p.Leu154Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.652T>A
  hgvsp: ENSP00000289932.3:p.Leu218Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*664T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.547T>A
  hgvsp: ENSP00000454401.1:p.Leu183Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.442T>A
  hgvsp: ENSP00000441384.1:p.Leu148Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.329T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.442T>A
  hgvsp: ENSP00000456234.1:p.Leu148Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.460T>A
  hgvsp: ENSP00000457179.1:p.Leu154Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.547T>A
  hgvsp: ENSP00000416782.2:p.Leu183Met
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5040
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu218Met
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ

16-24895445-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895445
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895445
    reference: chr 16
allele count: 8
allele frequency: 6.613865970006118e-5
allele num: 120958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.334G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.657G>A
  hgvsp: ENSP00000289932.3:p.Met219Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.552G>A
  hgvsp: ENSP00000416782.2:p.Met184Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.465G>A
  hgvsp: ENSP00000389606.2:p.Met155Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.447G>A
  hgvsp: ENSP00000441384.1:p.Met149Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.465G>A
  hgvsp: ENSP00000441018.1:p.Met155Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*669G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.552G>A
  hgvsp: ENSP00000454401.1:p.Met184Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.447G>A
  hgvsp: ENSP00000456234.1:p.Met149Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.465G>A
  hgvsp: ENSP00000456376.1:p.Met155Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.465G>A
  hgvsp: ENSP00000457179.1:p.Met155Ile
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5042
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met219Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

16-24895446-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895446
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895446
    reference: chr 16
allele count: 1
allele frequency: 8.267742575567167e-6
allele num: 120952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.466G>T
  hgvsp: ENSP00000389606.2:p.Gly156Cys
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.335G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*670G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.448G>T
  hgvsp: ENSP00000456234.1:p.Gly150Cys
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.466G>T
  hgvsp: ENSP00000457179.1:p.Gly156Cys
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.658G>T
  hgvsp: ENSP00000289932.3:p.Gly220Cys
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.466G>T
  hgvsp: ENSP00000456376.1:p.Gly156Cys
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.448G>T
  hgvsp: ENSP00000441384.1:p.Gly150Cys
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.466G>T
  hgvsp: ENSP00000441018.1:p.Gly156Cys
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.553G>T
  hgvsp: ENSP00000416782.2:p.Gly185Cys
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.553G>T
  hgvsp: ENSP00000454401.1:p.Gly185Cys
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5041
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly220Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD

16-24895461-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895461
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895461
    reference: chr 16
allele count: 15
allele frequency: 1.24166018244127e-4
allele num: 120806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+9G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+9G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+9G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+9G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+9G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+9G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+9G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+9G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+9G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+9G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+9G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5300
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4865
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

16-24895463-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895463
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895463
    reference: chr 16
allele count: 1
allele frequency: 8.27787159365584e-6
allele num: 120804
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+11T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+11T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+11T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+11T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+11T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+11T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+11T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+11T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+11T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+11T>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+11T>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5419
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5040
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

16-24895469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895469
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895469
    reference: chr 16
allele count: 1
allele frequency: 8.28363154406892e-6
allele num: 120720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+17G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+17G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+17G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+17G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+17G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+17G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+17G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+17G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+17G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+17G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+17G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4856
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5523
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

16-24895475-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895475
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895475
    reference: chr 16
allele count: 1
allele frequency: 8.289674381590291e-6
allele num: 120632
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+23T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+23T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+23T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+23T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+23T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+23T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+23T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+23T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+23T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+23T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+23T>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4855
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46303
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS

16-24895480-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895480
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895480
    reference: chr 16
allele count: 2
allele frequency: 1.658649859014762e-5
allele num: 120580
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+28C>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

16-24895488-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895488
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895488
    reference: chr 16
allele count: 2
allele frequency: 1.659062629614268e-5
allele num: 120550
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+36A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+36A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+36A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+36A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+36A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+36A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+36A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+36A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+36A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+36A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+36A>G
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4506
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

16-24895492-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895492
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895492
    reference: chr 16
allele count: 1
allele frequency: 8.300959590928711e-6
allele num: 120468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+40C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+40C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+40C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+40C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+40C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+40C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+40C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+40C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+40C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+40C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+40C>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5282
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

16-24895495-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895495
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895495
    reference: chr 16
allele count: 1
allele frequency: 8.303992559622666e-6
allele num: 120424
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+43C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+43C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+43C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+43C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+43C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+43C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+43C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+43C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+43C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+43C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+43C>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5330
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/16-24895501-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895501
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895501
    reference: chr 16
allele count: 4
allele frequency: 3.323860331388875e-5
allele num: 120342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+49A>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+49A>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+49A>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+49A>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+49A>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+49A>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+49A>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+49A>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+49A>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+49A>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+49A>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

16-24895502-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895502
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895502
    reference: chr 16
allele count: 4
allele frequency: 3.324357567900003e-5
allele num: 120324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+50G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+50G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+50G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+50G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+50G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+50G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+50G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+50G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+50G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+50G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+50G>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5027
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

16-24895503-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895503
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895503
    reference: chr 16
allele count: 1
allele frequency: 8.315593400745077e-6
allele num: 120256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+51C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+51C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+51C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+51C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+51C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+51C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+51C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+51C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+51C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+51C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+51C>G
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5027
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

16-24895504-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24895504
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24895504
    reference: chr 16
allele count: 1
allele frequency: 8.314625426124552e-6
allele num: 120270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.559+52A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.664+52A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*676+52A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.454+52A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.454+52A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+52A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.472+52A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.559+52A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.472+52A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.341+52A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+52A>G
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3325
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

16-24902143-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902143
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902143
    reference: chr 16
allele count: 1
allele frequency: 8.354079296920687e-6
allele num: 119702
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.473-47A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*677-47A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.560-47A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6691A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.342-47A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.455-47A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.665-47A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.455-47A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.560-47A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.473-47A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6691A>G
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42620
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

16-24902146-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902146
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902146
    reference: chr 16
allele count: 2
allele frequency: 1.670787943594199e-5
allele num: 119704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.455-44G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.473-44G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6694G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*677-44G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.455-44G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.473-44G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.560-44G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6694G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.665-44G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.342-44G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.560-44G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42621
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS

16-24902162-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902162
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902162
    reference: chr 16
allele count: 4
allele frequency: 3.339622956568203e-5
allele num: 119774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6710C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.560-28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.665-28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.455-28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.473-28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.455-28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6710C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.342-28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.473-28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*677-28C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.560-28C>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 42621
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

16-24902163-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902163
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902163
    reference: chr 16
allele count: 480
allele frequency: 4.006477138039831e-3
allele num: 119806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.455-27G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6711G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.473-27G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.560-27G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.342-27G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.560-27G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.665-27G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.455-27G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6711G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.473-27G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*677-27G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 42677
  bin: 9.75e1
  variant carriers: 361
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 8
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum

16-24902175-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902175
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902175
    reference: chr 16
allele count: 1
allele frequency: 8.334444592612349e-6
allele num: 119984
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6723T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.665-15T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.560-15T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.455-15T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.342-15T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6723T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.473-15T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.473-15T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.560-15T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.455-15T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*677-15T>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42677
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

16-24902184-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902184
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902184
    reference: chr 16
allele count: 1
allele frequency: 8.324315325064513e-6
allele num: 120130
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.455-6T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.455-6T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.560-6T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.665-6T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*677-6T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.342-6T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6732T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.473-6T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.560-6T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6732T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.473-6T>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.665-6T>C
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

16-24902187-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902187
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902187
    reference: chr 16
allele count: 2
allele frequency: 1.664004259850905e-5
allele num: 120192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.473-3T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.455-3T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.665-3T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.342-3T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6735T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.455-3T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.560-3T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6735T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.560-3T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*677-3T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.473-3T>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42677
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.665-3T>C
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-24902194-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902194
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902194
    reference: chr 16
allele count: 121151
allele frequency: 9.999092124593519e-1
allele num: 121162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.459T>C
  hgvsp: ENST00000545376.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*681T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.669T>C
  hgvsp: ENST00000347898.3:c.669T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.459T>C
  hgvsp: ENST00000568579.1:c.459T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.564T>C
  hgvsp: ENST00000424767.2:c.564T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.477T>C
  hgvsp: ENST00000539472.1:c.477T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.346T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.477T>C
  hgvsp: ENST00000565769.1:c.477T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6742T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.564T>C
  hgvsp: ENST00000567758.1:c.564T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6742T>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52330
  bin: 9.75e1
  variant carriers: 52330
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.75e1
  variant carriers: 313
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 8.25e1
  variant carriers: 679
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 279
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 6.75e1
  variant carriers: 751
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 3.25e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.75e1
  variant carriers: 407
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.25e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 261
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.75e1
  variant carriers: 234
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 5.25e1
  variant carriers: 466
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.25e1
  variant carriers: 588
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.25e1
  variant carriers: 749
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 366
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 672
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 8.75e1
  variant carriers: 737
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 587
genotype quality: GenotypeQuality
hgvs: p.Phe223Phe
num of homozygotes: 60570
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

16-24902195-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902195
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902195
    reference: chr 16
allele count: 6
allele frequency: 4.95319233245827e-5
allele num: 121134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6743G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6743G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.460G>A
  hgvsp: ENSP00000441384.1:p.Ala154Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.565G>A
  hgvsp: ENSP00000454401.1:p.Ala189Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.478G>A
  hgvsp: ENSP00000457179.1:p.Ala160Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.347G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.460G>A
  hgvsp: ENSP00000456234.1:p.Ala154Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.670G>A
  hgvsp: ENSP00000289932.3:p.Ala224Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.565G>A
  hgvsp: ENSP00000416782.2:p.Ala189Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.478G>A
  hgvsp: ENSP00000441018.1:p.Ala160Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*682G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4553
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala224Thr
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

16-24902197-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902197
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902197
    reference: chr 16
allele count: 2
allele frequency: 1.651036851142517e-5
allele num: 121136
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.567C>T
  hgvsp: ENST00000424767.2:c.567C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.462C>T
  hgvsp: ENST00000568579.1:c.462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6745C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.480C>T
  hgvsp: ENST00000539472.1:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.462C>T
  hgvsp: ENST00000545376.1:c.462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.672C>T
  hgvsp: ENST00000347898.3:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.567C>T
  hgvsp: ENST00000567758.1:c.567C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6745C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.349C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.480C>T
  hgvsp: ENST00000565769.1:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*684C>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3419
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala224Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

16-24902199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902199
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902199
    reference: chr 16
allele count: 7
allele frequency: 5.778438170711573e-5
allele num: 121140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6747C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.674C>T
  hgvsp: ENSP00000289932.3:p.Ala225Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*686C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.482C>T
  hgvsp: ENSP00000441018.1:p.Ala161Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.569C>T
  hgvsp: ENSP00000454401.1:p.Ala190Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.569C>T
  hgvsp: ENSP00000416782.2:p.Ala190Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.464C>T
  hgvsp: ENSP00000456234.1:p.Ala155Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.464C>T
  hgvsp: ENSP00000441384.1:p.Ala155Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.351C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6747C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.482C>T
  hgvsp: ENSP00000457179.1:p.Ala161Val
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala225Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ

16-24902200-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902200
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902200
    reference: chr 16
allele count: 1
allele frequency: 8.254366559910193e-6
allele num: 121148
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.483G>A
  hgvsp: ENST00000539472.1:c.483G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.570G>A
  hgvsp: ENST00000424767.2:c.570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.465G>A
  hgvsp: ENST00000568579.1:c.465G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.465G>A
  hgvsp: ENST00000545376.1:c.465G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.570G>A
  hgvsp: ENST00000567758.1:c.570G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.352G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6748G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.675G>A
  hgvsp: ENST00000347898.3:c.675G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.483G>A
  hgvsp: ENST00000565769.1:c.483G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*687G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6748G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4591
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6698
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala225Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-24902200-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902200
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902200
    reference: chr 16
allele count: 5
allele frequency: 4.127183279955096e-5
allele num: 121148
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.483G>C
  hgvsp: ENST00000539472.1:c.483G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.483G>C
  hgvsp: ENST00000565769.1:c.483G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6748G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.465G>C
  hgvsp: ENST00000545376.1:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.570G>C
  hgvsp: ENST00000567758.1:c.570G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.675G>C
  hgvsp: ENST00000347898.3:c.675G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.352G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.570G>C
  hgvsp: ENST00000424767.2:c.570G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.465G>C
  hgvsp: ENST00000568579.1:c.465G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6748G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*687G>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6698
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4591
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala225Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

16-24902211-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902211
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902211
    reference: chr 16
allele count: 1
allele frequency: 8.253821519363466e-6
allele num: 121156
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.581T>C
  hgvsp: ENSP00000416782.2:p.Met194Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.363T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*698T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6759T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.686T>C
  hgvsp: ENSP00000289932.3:p.Met229Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.494T>C
  hgvsp: ENSP00000441018.1:p.Met165Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.476T>C
  hgvsp: ENSP00000456234.1:p.Met159Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.494T>C
  hgvsp: ENSP00000457179.1:p.Met165Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.476T>C
  hgvsp: ENSP00000441384.1:p.Met159Thr
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6759T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.581T>C
  hgvsp: ENSP00000454401.1:p.Met194Thr
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6694
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4591
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met229Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

16-24902233-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902233
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902233
    reference: chr 16
allele count: 3
allele frequency: 2.475574333245313e-5
allele num: 121184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*720C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.603C>T
  hgvsp: ENST00000567758.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6781C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.708C>T
  hgvsp: ENST00000347898.3:c.708C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.498C>T
  hgvsp: ENST00000568579.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.516C>T
  hgvsp: ENST00000565769.1:c.516C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.498C>T
  hgvsp: ENST00000545376.1:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.603C>T
  hgvsp: ENST00000424767.2:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.516C>T
  hgvsp: ENST00000539472.1:c.516C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.385C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6781C>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6693
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5406
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr236Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

16-24902247-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902247
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902247
    reference: chr 16
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.512C>T
  hgvsp: ENSP00000441384.1:p.Ala171Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6795C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*734C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.512C>T
  hgvsp: ENSP00000456234.1:p.Ala171Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.722C>T
  hgvsp: ENSP00000289932.3:p.Ala241Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.617C>T
  hgvsp: ENSP00000454401.1:p.Ala206Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6795C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.530C>T
  hgvsp: ENSP00000457179.1:p.Ala177Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.399C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.617C>T
  hgvsp: ENSP00000416782.2:p.Ala206Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.530C>T
  hgvsp: ENSP00000441018.1:p.Ala177Val
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala241Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

16-24902255-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902255
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902255
    reference: chr 16
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6803C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.730C>T
  hgvsp: ENSP00000289932.3:p.Arg244Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.520C>T
  hgvsp: ENSP00000441384.1:p.Arg174Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.625C>T
  hgvsp: ENSP00000454401.1:p.Arg209Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.538C>T
  hgvsp: ENSP00000457179.1:p.Arg180Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.520C>T
  hgvsp: ENSP00000456234.1:p.Arg174Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6803C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.625C>T
  hgvsp: ENSP00000416782.2:p.Arg209Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.538C>T
  hgvsp: ENSP00000441018.1:p.Arg180Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.407C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*742C>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg244Trp
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

16-24902256-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902256
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902256
    reference: chr 16
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.539G>A
  hgvsp: ENSP00000441018.1:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.408G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6804G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.539G>A
  hgvsp: ENSP00000457179.1:p.Arg180Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*743G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.731G>A
  hgvsp: ENSP00000289932.3:p.Arg244Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.521G>A
  hgvsp: ENSP00000456234.1:p.Arg174Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.626G>A
  hgvsp: ENSP00000416782.2:p.Arg209Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.521G>A
  hgvsp: ENSP00000441384.1:p.Arg174Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6804G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.626G>A
  hgvsp: ENSP00000454401.1:p.Arg209Gln
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg244Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

16-24902257-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902257
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902257
    reference: chr 16
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.409G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6805G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.540G>C
  hgvsp: ENST00000539472.1:c.540G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.522G>C
  hgvsp: ENST00000568579.1:c.522G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.732G>C
  hgvsp: ENST00000347898.3:c.732G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.627G>C
  hgvsp: ENST00000424767.2:c.627G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.522G>C
  hgvsp: ENST00000545376.1:c.522G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.540G>C
  hgvsp: ENST00000565769.1:c.540G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6805G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.627G>C
  hgvsp: ENST00000567758.1:c.627G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*744G>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6689
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3704
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg244Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

16-24902271-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902271
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902271
    reference: chr 16
allele count: 1
allele frequency: 8.250552787036732e-6
allele num: 121204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6819G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.554G>A
  hgvsp: ENSP00000441018.1:p.Ser185Asn
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.746G>A
  hgvsp: ENSP00000289932.3:p.Ser249Asn
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.536G>A
  hgvsp: ENSP00000456234.1:p.Ser179Asn
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6819G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.554G>A
  hgvsp: ENSP00000457179.1:p.Ser185Asn
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.641G>A
  hgvsp: ENSP00000454401.1:p.Ser214Asn
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.536G>A
  hgvsp: ENSP00000441384.1:p.Ser179Asn
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.641G>A
  hgvsp: ENSP00000416782.2:p.Ser214Asn
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*758G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.423G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser249Asn
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

16-24902275-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902275
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902275
    reference: chr 16
allele count: 3
allele frequency: 2.475002475002475e-5
allele num: 121212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6823C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.558C>T
  hgvsp: ENST00000565769.1:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.558C>T
  hgvsp: ENST00000539472.1:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.645C>T
  hgvsp: ENST00000567758.1:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.540C>T
  hgvsp: ENST00000545376.1:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.540C>T
  hgvsp: ENST00000568579.1:c.540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.645C>T
  hgvsp: ENST00000424767.2:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*762C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.427C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.750C>T
  hgvsp: ENST00000347898.3:c.750C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6823C>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6688
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys250Cys
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

16-24902276-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902276
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902276
    reference: chr 16
allele count: 1
allele frequency: 8.249736008447729e-6
allele num: 121216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.559G>A
  hgvsp: ENSP00000441018.1:p.Gly187Arg
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.751G>A
  hgvsp: ENSP00000289932.3:p.Gly251Arg
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.646G>A
  hgvsp: ENSP00000454401.1:p.Gly216Arg
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.541G>A
  hgvsp: ENSP00000456234.1:p.Gly181Arg
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.646G>A
  hgvsp: ENSP00000416782.2:p.Gly216Arg
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.541G>A
  hgvsp: ENSP00000441384.1:p.Gly181Arg
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6824G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.559G>A
  hgvsp: ENSP00000457179.1:p.Gly187Arg
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*763G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.428G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6824G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly251Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

16-24902278-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902278
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902278
    reference: chr 16
allele count: 2
allele frequency: 1.649919978881024e-5
allele num: 121218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.543G>C
  hgvsp: ENST00000568579.1:c.543G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.543G>C
  hgvsp: ENST00000545376.1:c.543G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.430G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*765G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6826G>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.648G>C
  hgvsp: ENST00000567758.1:c.648G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.753G>C
  hgvsp: ENST00000347898.3:c.753G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.648G>C
  hgvsp: ENST00000424767.2:c.648G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.561G>C
  hgvsp: ENST00000565769.1:c.561G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.561G>C
  hgvsp: ENST00000539472.1:c.561G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6826G>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5408
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4550
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly251Gly
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

16-24902282-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902282
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902282
    reference: chr 16
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.757C>T
  hgvsp: ENSP00000289932.3:p.Pro253Ser
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.547C>T
  hgvsp: ENSP00000456234.1:p.Pro183Ser
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.652C>T
  hgvsp: ENSP00000454401.1:p.Pro218Ser
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.565C>T
  hgvsp: ENSP00000441018.1:p.Pro189Ser
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.565C>T
  hgvsp: ENSP00000457179.1:p.Pro189Ser
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6830C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.652C>T
  hgvsp: ENSP00000416782.2:p.Pro218Ser
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.434C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*769C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6830C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.547C>T
  hgvsp: ENSP00000441384.1:p.Pro183Ser
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3705
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5409
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro253Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

16-24902285-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902285
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902285
    reference: chr 16
allele count: 5
allele frequency: 4.124663839897049e-5
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.655C>T
  hgvsp: ENSP00000454401.1:p.Arg219Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.655C>T
  hgvsp: ENSP00000416782.2:p.Arg219Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6833C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.760C>T
  hgvsp: ENSP00000289932.3:p.Arg254Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.568C>T
  hgvsp: ENSP00000457179.1:p.Arg190Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*772C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.550C>T
  hgvsp: ENSP00000441384.1:p.Arg184Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6833C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.550C>T
  hgvsp: ENSP00000456234.1:p.Arg184Trp
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.437C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.568C>T
  hgvsp: ENSP00000441018.1:p.Arg190Trp
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg254Trp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

16-24902286-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902286
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902286
    reference: chr 16
allele count: 6
allele frequency: 4.949841605068638e-5
allele num: 121216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.656G>A
  hgvsp: ENSP00000454401.1:p.Arg219Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6834G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.438G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.656G>A
  hgvsp: ENSP00000416782.2:p.Arg219Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.551G>A
  hgvsp: ENSP00000456234.1:p.Arg184Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.569G>A
  hgvsp: ENSP00000441018.1:p.Arg190Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6834G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.569G>A
  hgvsp: ENSP00000457179.1:p.Arg190Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.761G>A
  hgvsp: ENSP00000289932.3:p.Arg254Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*773G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.551G>A
  hgvsp: ENSP00000441384.1:p.Arg184Gln
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3706
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4549
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg254Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

16-24902296-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902296
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902296
    reference: chr 16
allele count: 468
allele frequency: 3.860685354143637e-3
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.561C>T
  hgvsp: ENST00000568579.1:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.666C>T
  hgvsp: ENST00000424767.2:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*783C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6844C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.666C>T
  hgvsp: ENST00000567758.1:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.448C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.579C>T
  hgvsp: ENST00000539472.1:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.771C>T
  hgvsp: ENST00000347898.3:c.771C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.579C>T
  hgvsp: ENST00000565769.1:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6844C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.561C>T
  hgvsp: ENST00000545376.1:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4546
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 9.75e1
  variant carriers: 386
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5411
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
hgvs: p.Ala257Ala
num of homozygotes: 7
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

16-24902297-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902297
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902297
    reference: chr 16
allele count: 29
allele frequency: 2.392423442449842e-4
allele num: 121216
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6845T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.580T>C
  hgvsp: ENSP00000457179.1:p.Phe194Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.562T>C
  hgvsp: ENSP00000441384.1:p.Phe188Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.772T>C
  hgvsp: ENSP00000289932.3:p.Phe258Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.667T>C
  hgvsp: ENSP00000416782.2:p.Phe223Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6845T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.580T>C
  hgvsp: ENSP00000441018.1:p.Phe194Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.562T>C
  hgvsp: ENSP00000456234.1:p.Phe188Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.667T>C
  hgvsp: ENSP00000454401.1:p.Phe223Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.449T>C
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*784T>C
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6541
  bin: 9.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5421
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Phe258Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum

16-24902299-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902299
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902299
    reference: chr 16
allele count: 2021
allele frequency: 1.667134113144045e-2
allele num: 121226
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6847C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6847C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*786C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.669C>G
  hgvsp: ENSP00000416782.2:p.Phe223Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.669C>G
  hgvsp: ENSP00000454401.1:p.Phe223Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.774C>G
  hgvsp: ENSP00000289932.3:p.Phe258Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.564C>G
  hgvsp: ENSP00000441384.1:p.Phe188Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.451C>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.564C>G
  hgvsp: ENSP00000456234.1:p.Phe188Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.582C>G
  hgvsp: ENSP00000441018.1:p.Phe194Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.582C>G
  hgvsp: ENSP00000457179.1:p.Phe194Leu
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4588
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 5119
  bin: 6.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2561
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 8.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5296
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 9.75e1
  variant carriers: 1730
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 7.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 2.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
hgvs: p.Phe258Leu
num of homozygotes: 74
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

16-24902310-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902310
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902310
    reference: chr 16
allele count: 1
allele frequency: 8.253957772752034e-6
allele num: 121154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.680G>A
  hgvsp: ENSP00000416782.2:p.Arg227Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.785G>A
  hgvsp: ENSP00000289932.3:p.Arg262Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.593G>A
  hgvsp: ENSP00000457179.1:p.Arg198Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.575G>A
  hgvsp: ENSP00000441384.1:p.Arg192Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6858G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.575G>A
  hgvsp: ENSP00000456234.1:p.Arg192Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*797G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.680G>A
  hgvsp: ENSP00000454401.1:p.Arg227Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.593G>A
  hgvsp: ENSP00000441018.1:p.Arg198Gln
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6858G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.462G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5261
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg262Gln
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

16-24902311-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902311
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902311
    reference: chr 16
allele count: 3
allele frequency: 2.476023835856127e-5
allele num: 121162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.576A>T
  hgvsp: ENST00000568579.1:c.576A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.594A>T
  hgvsp: ENST00000539472.1:c.594A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.786A>T
  hgvsp: ENST00000347898.3:c.786A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*798A>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.681A>T
  hgvsp: ENST00000424767.2:c.681A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6859A>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.576A>T
  hgvsp: ENST00000545376.1:c.576A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.463A>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6859A>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.594A>T
  hgvsp: ENST00000565769.1:c.594A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.681A>T
  hgvsp: ENST00000567758.1:c.681A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5261
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5027
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5482
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg262Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

16-24902316-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902316
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902316
    reference: chr 16
allele count: 2
allele frequency: 1.650764303872693e-5
allele num: 121156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.581C>T
  hgvsp: ENSP00000441384.1:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.599C>T
  hgvsp: ENSP00000457179.1:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*803C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6864C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.686C>T
  hgvsp: ENSP00000416782.2:p.Pro229Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.581C>T
  hgvsp: ENSP00000456234.1:p.Pro194Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.599C>T
  hgvsp: ENSP00000441018.1:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.791C>T
  hgvsp: ENSP00000289932.3:p.Pro264Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6864C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.468C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.686C>T
  hgvsp: ENSP00000454401.1:p.Pro229Leu
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4742
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro264Leu
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum

16-24902317-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902317
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902317
    reference: chr 16
allele count: 7
allele frequency: 5.777770440926424e-5
allele num: 121154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*804G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.792G>A
  hgvsp: ENST00000347898.3:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.687G>A
  hgvsp: ENST00000424767.2:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.582G>A
  hgvsp: ENST00000568579.1:c.582G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.582G>A
  hgvsp: ENST00000545376.1:c.582G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.469G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.600G>A
  hgvsp: ENST00000565769.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.687G>A
  hgvsp: ENST00000567758.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6865G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6865G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.600G>A
  hgvsp: ENST00000539472.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro264Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

16-24902317-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902317
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902317
    reference: chr 16
allele count: 2
allele frequency: 1.650791554550407e-5
allele num: 121154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6865G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.687G>T
  hgvsp: ENST00000424767.2:c.687G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.792G>T
  hgvsp: ENST00000347898.3:c.792G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000158865
  ensembl transcript: ENST00000565586
  gene symbol: SLC5A11
  hgvsc: ENST00000565586.1:n.469G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.687G>T
  hgvsp: ENST00000567758.1:c.687G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.600G>T
  hgvsp: ENST00000565769.1:c.600G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*804G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.582G>T
  hgvsp: ENST00000568579.1:c.582G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.600G>T
  hgvsp: ENST00000539472.1:c.600G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.582G>T
  hgvsp: ENST00000545376.1:c.582G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6865G>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4061
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5263
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5484
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro264Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

16-24902334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902334
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902334
    reference: chr 16
allele count: 9
allele frequency: 7.433102081268583e-5
allele num: 121080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.599C>T
  hgvsp: ENSP00000441384.1:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6882C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.809C>T
  hgvsp: ENSP00000289932.3:p.Pro270Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*821C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.599C>T
  hgvsp: ENSP00000456234.1:p.Pro200Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.617C>T
  hgvsp: ENSP00000441018.1:p.Pro206Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.617C>T
  hgvsp: ENSP00000457179.1:p.Pro206Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.704C>T
  hgvsp: ENSP00000454401.1:p.Pro235Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.704C>T
  hgvsp: ENSP00000416782.2:p.Pro235Leu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6882C>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5015
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5265
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro270Leu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

16-24902335-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902335
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902335
    reference: chr 16
allele count: 7
allele frequency: 5.782065684266174e-5
allele num: 121064
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.705G>A
  hgvsp: ENST00000424767.2:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.705G>A
  hgvsp: ENST00000567758.1:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.618G>A
  hgvsp: ENST00000539472.1:c.618G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.600G>A
  hgvsp: ENST00000545376.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6883G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*822G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6883G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.600G>A
  hgvsp: ENST00000568579.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.810G>A
  hgvsp: ENST00000347898.3:c.810G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.618G>A
  hgvsp: ENST00000565769.1:c.618G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5569
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5266
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4665
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro270Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-24902337-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902337
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902337
    reference: chr 16
allele count: 1
allele frequency: 8.259957378619926e-6
allele num: 121066
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6885G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.602G>A
  hgvsp: ENSP00000456234.1:p.Trp201Ter
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.707G>A
  hgvsp: ENSP00000454401.1:p.Trp236Ter
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.620G>A
  hgvsp: ENSP00000441018.1:p.Trp207Ter
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.620G>A
  hgvsp: ENSP00000457179.1:p.Trp207Ter
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.602G>A
  hgvsp: ENSP00000441384.1:p.Trp201Ter
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.707G>A
  hgvsp: ENSP00000416782.2:p.Trp236Ter
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.812G>A
  hgvsp: ENSP00000289932.3:p.Trp271Ter
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*824G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6885G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5268
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4999
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Trp271Ter
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS

16-24902341-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902341
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902341
    reference: chr 16
allele count: 2
allele frequency: 1.652373634726284e-5
allele num: 121038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*828G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.711G>A
  hgvsp: ENST00000567758.1:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.816G>A
  hgvsp: ENST00000347898.3:c.816G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6889G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.606G>A
  hgvsp: ENST00000545376.1:c.606G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.624G>A
  hgvsp: ENST00000565769.1:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.606G>A
  hgvsp: ENST00000568579.1:c.606G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6889G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.624G>A
  hgvsp: ENST00000539472.1:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.711G>A
  hgvsp: ENST00000424767.2:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5268
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4998
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro272Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

16-24902343-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902343
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902343
    reference: chr 16
allele count: 3
allele frequency: 2.478478544637399e-5
allele num: 121042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6891G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*830G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.818G>A
  hgvsp: ENSP00000289932.3:p.Gly273Glu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.626G>A
  hgvsp: ENSP00000441018.1:p.Gly209Glu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.626G>A
  hgvsp: ENSP00000457179.1:p.Gly209Glu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.608G>A
  hgvsp: ENSP00000441384.1:p.Gly203Glu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.713G>A
  hgvsp: ENSP00000416782.2:p.Gly238Glu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.608G>A
  hgvsp: ENSP00000456234.1:p.Gly203Glu
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6891G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.713G>A
  hgvsp: ENSP00000454401.1:p.Gly238Glu
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5268
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly273Glu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

16-24902344-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902344
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902344
    reference: chr 16
allele count: 1
allele frequency: 8.262277744728666e-6
allele num: 121032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.714G>T
  hgvsp: ENST00000567758.1:c.714G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.714G>T
  hgvsp: ENST00000424767.2:c.714G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.627G>T
  hgvsp: ENST00000539472.1:c.627G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*831G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.609G>T
  hgvsp: ENST00000545376.1:c.609G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.609G>T
  hgvsp: ENST00000568579.1:c.609G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.627G>T
  hgvsp: ENST00000565769.1:c.627G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.819G>T
  hgvsp: ENST00000347898.3:c.819G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6892G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6892G>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4996
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5265
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly273Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

16-24902345-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902345
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902345
    reference: chr 16
allele count: 2
allele frequency: 1.652564780539397e-5
allele num: 121024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.628G>A
  hgvsp: ENSP00000441018.1:p.Val210Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.715G>A
  hgvsp: ENSP00000454401.1:p.Val239Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.610G>A
  hgvsp: ENSP00000456234.1:p.Val204Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6893G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.820G>A
  hgvsp: ENSP00000289932.3:p.Val274Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.628G>A
  hgvsp: ENSP00000457179.1:p.Val210Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6893G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.610G>A
  hgvsp: ENSP00000441384.1:p.Val204Ile
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*832G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.715G>A
  hgvsp: ENSP00000416782.2:p.Val239Ile
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4995
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val274Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

16-24902362-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902362
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902362
    reference: chr 16
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.645C>T
  hgvsp: ENST00000565769.1:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6910C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.732C>T
  hgvsp: ENST00000424767.2:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6910C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.627C>T
  hgvsp: ENST00000568579.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.627C>T
  hgvsp: ENST00000545376.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.645C>T
  hgvsp: ENST00000539472.1:c.645C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*849C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.732C>T
  hgvsp: ENST00000567758.1:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.837C>T
  hgvsp: ENST00000347898.3:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5256
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser279Ser
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

16-24902363-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902363
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902363
    reference: chr 16
allele count: 1
allele frequency: 8.26801600687899e-6
allele num: 120948
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*850A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.628A>G
  hgvsp: ENSP00000441384.1:p.Ile210Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.646A>G
  hgvsp: ENSP00000441018.1:p.Ile216Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.733A>G
  hgvsp: ENSP00000416782.2:p.Ile245Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.838A>G
  hgvsp: ENSP00000289932.3:p.Ile280Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.733A>G
  hgvsp: ENSP00000454401.1:p.Ile245Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.472+6911A>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.646A>G
  hgvsp: ENSP00000457179.1:p.Ile216Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.628A>G
  hgvsp: ENSP00000456234.1:p.Ile210Val
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.472+6911A>G
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile280Val
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

16-24902388-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902388
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902388
    reference: chr 16
allele count: 2
allele frequency: 1.656589083077942e-5
allele num: 120730
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.863C>T
  hgvsp: ENSP00000289932.3:p.Thr288Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.758C>T
  hgvsp: ENSP00000454401.1:p.Thr253Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.653C>T
  hgvsp: ENSP00000441384.1:p.Thr218Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.653C>T
  hgvsp: ENSP00000456234.1:p.Thr218Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*875C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.671C>T
  hgvsp: ENSP00000441018.1:p.Thr224Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.473-6907C>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.671C>T
  hgvsp: ENSP00000457179.1:p.Thr224Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.758C>T
  hgvsp: ENSP00000416782.2:p.Thr253Met
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.473-6907C>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr288Met
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

16-24902389-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902389
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902389
    reference: chr 16
allele count: 4
allele frequency: 3.313342831582784e-5
allele num: 120724
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.654G>A
  hgvsp: ENST00000545376.1:c.654G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.473-6906G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.864G>A
  hgvsp: ENST00000347898.3:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*876G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.473-6906G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.759G>A
  hgvsp: ENST00000424767.2:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.672G>A
  hgvsp: ENST00000539472.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.654G>A
  hgvsp: ENST00000568579.1:c.654G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.672G>A
  hgvsp: ENST00000565769.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.759G>A
  hgvsp: ENST00000567758.1:c.759G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4991
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr288Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ

16-24902396-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902396
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902396
    reference: chr 16
allele count: 1
allele frequency: 8.288025460814215e-6
allele num: 120656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.473-6899G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.473-6899G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.765+1G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.765+1G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.678+1G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.870+1G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*882+1G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.660+1G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.660+1G>T
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.678+1G>T
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2501
  bin: 6.75e1
  variant carriers: 0
hgvs: c.870+1G>T
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

16-24902397-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902397
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902397
    reference: chr 16
allele count: 3
allele frequency: 2.486119167978785e-5
allele num: 120670
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.870+2T>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.473-6898T>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.660+2T>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.660+2T>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.765+2T>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.678+2T>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.765+2T>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.678+2T>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*882+2T>G
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.473-6898T>G
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4987
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 7.75e1
  variant carriers: 0
hgvs: c.870+2T>G
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum

16-24902409-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902409
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902409
    reference: chr 16
allele count: 1
allele frequency: 8.299168423323983e-6
allele num: 120494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  hgvsc: ENST00000565769.1:c.678+14G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  hgvsc: ENST00000568579.1:c.660+14G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  hgvsc: ENST00000449109.2:c.473-6886G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  hgvsc: ENST00000569071.1:c.473-6886G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  hgvsc: ENST00000567758.1:c.765+14G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  hgvsc: ENST00000539472.1:c.678+14G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  hgvsc: ENST00000347898.3:c.870+14G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  hgvsc: ENST00000424767.2:c.765+14G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  hgvsc: ENST00000545376.1:c.660+14G>A
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  hgvsc: ENST00000488922.2:c.*882+14G>A
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3814
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5268
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4985
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

16-24902413-GAGCAAGTTTTTCCTTCTCTTT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24902413
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 24902392
    reference: chr 16
allele count: 11
allele frequency: 9.132268455484342e-5
allele num: 120452
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000458806
  ensembl transcript: ENST00000488922
  gene symbol: SLC5A11
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000389606
  ensembl transcript: ENST00000449109
  gene symbol: SLC5A11
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000457179
  ensembl transcript: ENST00000565769
  gene symbol: SLC5A11
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000416782
  ensembl transcript: ENST00000424767
  gene symbol: SLC5A11
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441384
  ensembl transcript: ENST00000545376
  gene symbol: SLC5A11
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000441018
  ensembl transcript: ENST00000539472
  gene symbol: SLC5A11
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000289932
  ensembl transcript: ENST00000347898
  gene symbol: SLC5A11
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456234
  ensembl transcript: ENST00000568579
  gene symbol: SLC5A11
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000456376
  ensembl transcript: ENST00000569071
  gene symbol: SLC5A11
  variant of: http://identifiers.org/hgnc/23091
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000158865
  ensembl protein: ENSP00000454401
  ensembl transcript: ENST00000567758
  gene symbol: SLC5A11
  variant of: http://identifiers.org/hgnc/23091
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5268
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4986
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5486
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44419
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4515
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: GAGCAAGTTTTTCCTTCTCTTT

GenotypeDepth
all individuals: 5316
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1343
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46327
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1262
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

DP
type: SiteQuality
SIO_000300: 3.680574e6

VQSLOD
type: SiteQuality
SIO_000300: -5.299e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.07e-1

GenotypeDepth
all individuals: 4863
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1463
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6242
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1975
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46325
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1339
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.475e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.562e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

FS
type: SiteQuality
SIO_000300: 2.573e0

QD
type: SiteQuality
SIO_000300: 1.139e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.34e0

DP
type: SiteQuality
SIO_000300: 3.679569e6

GenotypeDepth
all individuals: 3473
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6247
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66540
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.637686431429611e-4
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.159000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 3.679423e6

BaseQRankSum
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SIO_000300: -7.099999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-2

VQSLOD
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SIO_000300: 4.6e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.005981903988938e-5
allele num: 66534
num of homozygotes: 0

VQSLOD
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SIO_000300: 9.409999999999999e-1

BaseQRankSum
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SIO_000300: -6.91e0

ClippingRankSum
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SIO_000300: -1.34e-1

ReadPosRankSum
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SIO_000300: 4.75e-1

DP
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SIO_000300: 3.678924e6

InbreedingCoeff
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SIO_000300: 5.1e-3

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 1.574e0

QD
type: SiteQuality
SIO_000300: 1.248e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503307276007216e-5
allele num: 66520
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.677857e6

VQSLOD
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SIO_000300: 9.28e-1

BaseQRankSum
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SIO_000300: -3.494e0

QD
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InbreedingCoeff
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SIO_000300: 4.9e-3

ReadPosRankSum
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SIO_000300: 1.7e-1

ClippingRankSum
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SIO_000300: -2.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.34e-1

FS
type: SiteQuality
SIO_000300: 4.314e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeDepth
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variant carriers: 8

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.261403102570039e-4
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.557e0

QD
type: SiteQuality
SIO_000300: 1.428e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.52e-1

DP
type: SiteQuality
SIO_000300: 3.67717e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.146e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503985561738607e-5
allele num: 66490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 3.675675e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.98e-1

BaseQRankSum
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SIO_000300: 5.02e-1

InbreedingCoeff
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SIO_000300: 4.0e-3

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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SIO_000300: 2.634e0

MQRankSum
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QD
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SIO_000300: 1.224e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 15

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.737720111214087e-3
allele num: 8632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

MQRankSum
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SIO_000300: -3.3e-2

ClippingRankSum
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FS
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BaseQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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DP
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SIO_000300: 3.670181e6

QD
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SIO_000300: 1.476e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505525277769414e-5
allele num: 66422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

BaseQRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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QD
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093102607847916e-5
allele num: 16412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.66351e6

VQSLOD
type: SiteQuality
SIO_000300: -5.88e-1

FS
type: SiteQuality
SIO_000300: 3.471e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 7.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.24e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507386192342478e-5
allele num: 66340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.43e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.093e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

DP
type: SiteQuality
SIO_000300: 3.659207e6

MQRankSum
type: SiteQuality
SIO_000300: 7.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

VQSLOD
type: SiteQuality
SIO_000300: -2.351e0

FS
type: SiteQuality
SIO_000300: 1.9393e1

GenotypeQuality
all individuals: 120
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
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variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507613447911955e-5
allele num: 66330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.782821365681862e-5
allele num: 10222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.79e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.3e-2

DP
type: SiteQuality
SIO_000300: 3.657107e6

QD
type: SiteQuality
SIO_000300: 1.518e1

GenotypeQuality
all individuals: 1638
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46343
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.015954398769491e-5
allele num: 66314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.521e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.072e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

DP
type: SiteQuality
SIO_000300: 3.651348e6

GenotypeQuality
all individuals: 176
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 750
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variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1198
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variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508705229172324e-5
allele num: 66282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.646327e6

QD
type: SiteQuality
SIO_000300: 1.677e1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.23e-1

FS
type: SiteQuality
SIO_000300: 3.513e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.681e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.77e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.7e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509069507741527e-5
allele num: 66266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.643772e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.52e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.96e-1

MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -3.396e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66222
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.457304337142155e-4
allele num: 16278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.639729e6

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.907e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.25e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 731
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.459117176933481e-4
allele num: 16266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66214
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.3205e1

DP
type: SiteQuality
SIO_000300: 3.639353e6

VQSLOD
type: SiteQuality
SIO_000300: -1.545e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.564e0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

QD
type: SiteQuality
SIO_000300: 1.957e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 751
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.161429451632779e-5
allele num: 16230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66186
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.18e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.985e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: -5.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.84e-1

QD
type: SiteQuality
SIO_000300: 2.06e1

DP
type: SiteQuality
SIO_000300: 3.639166e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1350
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510345869204048e-5
allele num: 66210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.21e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: -2.306e-1

DP
type: SiteQuality
SIO_000300: 3.639075e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 1.787e1

FS
type: SiteQuality
SIO_000300: 3.2e0

MQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.476e0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 965
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 52888
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variant carriers: 1

GenotypeQuality
all individuals: 685
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514692517418964e-4
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.858e0

QD
type: SiteQuality
SIO_000300: 1.332e1

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

FS
type: SiteQuality
SIO_000300: 3.32e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.95e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

DP
type: SiteQuality
SIO_000300: 6.857865e6

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 562
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variant carriers: 0

GenotypeQuality
all individuals: 52891
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166588894073728e-4
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110228522546743e-5
allele num: 16366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65814
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.859206e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.255e1

MQRankSum
type: SiteQuality
SIO_000300: 1.78e0

VQSLOD
type: SiteQuality
SIO_000300: -4.084e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 608
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2026
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 797
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 118
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 859
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GenotypeQuality
all individuals: 1031
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.038036213391663e-5
allele num: 65832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.22040517451794e-4
allele num: 16388
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.86758e6

FS
type: SiteQuality
SIO_000300: 4.096e0

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 1.096e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.94e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.861e-1

GenotypeQuality
all individuals: 604
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 468

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.83060776177691e-4
allele num: 16388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.028467595396729e-4
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 436
allele frequency: 4.351297405189621e-2
allele num: 10020
num of homozygotes: 8

Latino
type: Population
allele count: 16
allele frequency: 1.393000174125022e-3
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 3.493211020321376e-4
allele num: 65842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.33e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.45e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 6.886423e6

QD
type: SiteQuality
SIO_000300: 1.302e1

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516530178950561e-5
allele num: 65940
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

FS
type: SiteQuality
SIO_000300: 2.757e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 6.8e-1

QD
type: SiteQuality
SIO_000300: 1.426e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 6.89138e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e0

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 72
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GenotypeQuality
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GenotypeQuality
all individuals: 1091
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GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.089392278650591e-5
allele num: 16422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66014
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e0

MQ
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SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 4.197e0

DP
type: SiteQuality
SIO_000300: 6.894046e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.367e-1

QD
type: SiteQuality
SIO_000300: 1.287e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 629
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 841
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514096235956757e-5
allele num: 66046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.801e0

ReadPosRankSum
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SIO_000300: 8.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.16e-1

BaseQRankSum
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SIO_000300: 1.25e0

DP
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SIO_000300: 6.894954e6

ClippingRankSum
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SIO_000300: 3.1e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

QD
type: SiteQuality
SIO_000300: 1.345e1

GenotypeDepth
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variant carriers: 739

GenotypeQuality
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variant carriers: 67

GenotypeQuality
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variant carriers: 21

GenotypeQuality
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variant carriers: 108

GenotypeQuality
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variant carriers: 87

GenotypeQuality
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variant carriers: 96

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 60

GenotypeQuality
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variant carriers: 60

GenotypeQuality
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GenotypeQuality
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variant carriers: 49

GenotypeQuality
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variant carriers: 59505

GenotypeQuality
all individuals: 81
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variant carriers: 81

European (Finnish)
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allele count: 6614
allele frequency: 1.0e0
allele num: 6614
num of homozygotes: 3307

East Asian
type: Population
allele count: 8642
allele frequency: 9.993061979648473e-1
allele num: 8648
num of homozygotes: 4318

Other
type: Population
allele count: 903
allele frequency: 9.988938053097345e-1
allele num: 904
num of homozygotes: 451

African
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allele count: 10336
allele frequency: 1.0e0
allele num: 10336
num of homozygotes: 5168

Latino
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allele count: 11558
allele frequency: 1.0e0
allele num: 11558
num of homozygotes: 5779

South Asian
type: Population
allele count: 16486
allele frequency: 9.99878699660359e-1
allele num: 16488
num of homozygotes: 8242

European (Non-Finnish)
type: Population
allele count: 66612
allele frequency: 9.999699762812622e-1
allele num: 66614
num of homozygotes: 33305

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.1409093e7

QD
type: SiteQuality
SIO_000300: 3.441e1

MQRankSum
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SIO_000300: 1.15e-1

VQSLOD
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SIO_000300: 3.17e0

InbreedingCoeff
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

BaseQRankSum
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SIO_000300: 1.58e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 60
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.901915264074289e-4
allele num: 10338
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.505722267279445e-5
allele num: 66582
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-1

QD
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MQ
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SIO_000300: 5.972e1

DP
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VQSLOD
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SIO_000300: -6.577e-1

BaseQRankSum
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SIO_000300: 1.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

FS
type: SiteQuality
SIO_000300: 1.299e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

Latino
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num of homozygotes: 0

Other
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

BaseQRankSum
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SIO_000300: -1.304e0

VQSLOD
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QD
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MQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 6.26e-1

ReadPosRankSum
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SIO_000300: -4.22e-1

DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
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allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.934610176049526e-4
allele num: 10338
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.007088364269839e-5
allele num: 66588
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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QD
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1024
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501636784094663e-5
allele num: 66594
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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South Asian
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African
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Other
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InbreedingCoeff
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SIO_000300: 1.0e-4

DP
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VQSLOD
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QD
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MQRankSum
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MQ
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ClippingRankSum
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FS
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1024
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 5
allele frequency: 7.508183920473317e-5
allele num: 66594
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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MQ
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SIO_000300: 5.911e1

DP
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FS
type: SiteQuality
SIO_000300: 5.28e-1

MQRankSum
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SIO_000300: 1.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.35e-1

QD
type: SiteQuality
SIO_000300: 1.153e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

GenotypeDepth
all individuals: 5112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.24e0

BaseQRankSum
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SIO_000300: -7.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.34e-1

FS
type: SiteQuality
SIO_000300: 2.318e0

VQSLOD
type: SiteQuality
SIO_000300: 1.85e-1

QD
type: SiteQuality
SIO_000300: 1.253e1

MQ
type: SiteQuality
SIO_000300: 5.983e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 3.925282e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.503152206544582e-5
allele num: 66620
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
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SIO_000300: -6.08e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.926599e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.94e-1

QD
type: SiteQuality
SIO_000300: 1.395e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.130000000000001e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

MQRankSum
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SIO_000300: -2.4e-1

BaseQRankSum
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SIO_000300: -8.2e-1

DP
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SIO_000300: 3.927061e6

VQSLOD
type: SiteQuality
SIO_000300: -4.294e0

FS
type: SiteQuality
SIO_000300: 7.675e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 1771
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.652509652509652e-5
allele num: 10360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 4.063e0

ClippingRankSum
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SIO_000300: -2.18e0

QD
type: SiteQuality
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ReadPosRankSum
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500690317546071e-5
allele num: 66636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

DP
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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QD
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FS
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66640
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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InbreedingCoeff
type: SiteQuality
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QD
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BaseQRankSum
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MQ
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VQSLOD
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MQRankSum
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ClippingRankSum
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SIO_000300: -6.97e-1

ReadPosRankSum
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SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 1.756e0

DP
type: SiteQuality
SIO_000300: 3.927208e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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Latino
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East Asian
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FS
type: SiteQuality
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MQRankSum
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QD
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MQ
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 11564
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.0016509079994e-5
allele num: 66630
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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VQSLOD
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MQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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SIO_000300: 5.948e1

DP
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QD
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SIO_000300: 1.313e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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East Asian
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African
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European (Finnish)
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num of homozygotes: 0

BaseQRankSum
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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DP
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GenotypeDepth
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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South Asian
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East Asian
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European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

MQ
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BaseQRankSum
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VQSLOD
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 11562
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Other
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African
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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MQ
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ReadPosRankSum
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FS
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

African
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allele frequency: 1.929012345679012e-4
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50073536032656e-5
allele num: 66634
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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South Asian
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MQRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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FS
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QD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 1.157407407407407e-4
allele num: 8640
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Latino
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European (Non-Finnish)
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African
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South Asian
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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FS
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MQRankSum
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DP
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MQ
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 3
allele frequency: 1.818402230573403e-4
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 7.503451587730356e-5
allele num: 66636
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East Asian
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Other
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Latino
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African
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European (Finnish)
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MQ
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MQRankSum
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FS
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QD
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44972
bin: 9.75e1
variant carriers: 29

GenotypeQuality
all individuals: 1029
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730103806228374e-4
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.902263312721378e-4
allele num: 66628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.94e0

QD
type: SiteQuality
SIO_000300: 1.455e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.84e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.895319e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

GenotypeDepth
all individuals: 1515
bin: 9.25e1
variant carriers: 17

GenotypeQuality
all individuals: 1766
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1732
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 45050
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variant carriers: 1940

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 18
allele frequency: 1.986754966887417e-2
allele num: 906
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 616
allele frequency: 9.24508479663815e-3
allele num: 66630
num of homozygotes: 3

South Asian
type: Population
allele count: 185
allele frequency: 1.121348042186932e-2
allele num: 16498
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 20
allele frequency: 3.023888720895071e-3
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 140
allele frequency: 1.210653753026634e-2
allele num: 11564
num of homozygotes: 1

East Asian
type: Population
allele count: 6
allele frequency: 6.942837306179125e-4
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 1036
allele frequency: 9.988430389510219e-2
allele num: 10372
num of homozygotes: 65

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.69e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.45e-1

QD
type: SiteQuality
SIO_000300: 1.577e1

DP
type: SiteQuality
SIO_000300: 3.925449e6

VQSLOD
type: SiteQuality
SIO_000300: 6.49e0

GenotypeDepth
all individuals: 5028
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 178
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2611
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 5338
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50154659299078e-5
allele num: 66598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.611e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
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SIO_000300: -3.351e0

BaseQRankSum
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SIO_000300: 4.69e-1

FS
type: SiteQuality
SIO_000300: 1.8153e1

DP
type: SiteQuality
SIO_000300: 3.66904e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.31e1

GenotypeDepth
all individuals: 3248
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2614
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 33
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1111
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
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GenotypeQuality
all individuals: 1072
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1818
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.473026163463765e-4
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 3.668854e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.749e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-1

QD
type: SiteQuality
SIO_000300: 1.17e1

MQ
type: SiteQuality
SIO_000300: 5.948e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.68e0

GenotypeDepth
all individuals: 5262
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44441
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 1785
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 1110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.002822653294096e-5
allele num: 66604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.978e1

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.23e-1

DP
type: SiteQuality
SIO_000300: 3.668356e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.37e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.3e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44441
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 5364
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.504369238161016e-5
allele num: 66602
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.473026163463765e-4
allele num: 8638
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

QD
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SIO_000300: 1.212e1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.66807e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44441
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

South Asian
type: Population
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East Asian
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allele count: 2
allele frequency: 2.31535077564251e-4
allele num: 8638
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.79e0

QD
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DP
type: SiteQuality
SIO_000300: 3.66807e6

ClippingRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1779
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GenotypeQuality
all individuals: 1072
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.689922480620155e-5
allele num: 10320
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.949270326615705e-4
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212856276531231e-4
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66572
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.257e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

FS
type: SiteQuality
SIO_000300: 1.739e0

DP
type: SiteQuality
SIO_000300: 3.665643e6

GenotypeQuality
all individuals: 1780
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 1072
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.014964841637118e-5
allele num: 66556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.53e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-3

DP
type: SiteQuality
SIO_000300: 3.664303e6

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 1.255e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.77e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.907e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.05e-1

QD
type: SiteQuality
SIO_000300: 1.597e1

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 3.663114e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 35
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GenotypeQuality
all individuals: 44438
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502900598154438e-5
allele num: 66538
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

FS
type: SiteQuality
SIO_000300: 1.729e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.18e-1

DP
type: SiteQuality
SIO_000300: 3.662729e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

QD
type: SiteQuality
SIO_000300: 1.423e1

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 1813
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.508430765531544e-5
allele num: 66542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.47e-1

FS
type: SiteQuality
SIO_000300: 5.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.285e1

DP
type: SiteQuality
SIO_000300: 3.662328e6

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.402e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 1.923e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.43e-1

BaseQRankSum
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SIO_000300: -4.46e-1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

DP
type: SiteQuality
SIO_000300: 3.661741e6

VQSLOD
type: SiteQuality
SIO_000300: 1.87e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.005981903988938e-5
allele num: 66534
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.95e-1

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.012e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.66168e6

MQ
type: SiteQuality
SIO_000300: 5.941e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503940323647958e-5
allele num: 66492
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.311e0

VQSLOD
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ClippingRankSum
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QD
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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DP
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SIO_000300: 3.660307e6

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -5.115e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.503940323647958e-5
allele num: 66492
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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VQSLOD
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SIO_000300: 5.03e-1

InbreedingCoeff
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DP
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SIO_000300: 3.6601e6

QD
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FS
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ReadPosRankSum
type: SiteQuality
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MQ
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

BaseQRankSum
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SIO_000300: 2.94e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.013772942346524e-5
allele num: 66362
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10240
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: -1.41e-1

ClippingRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 4.91e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-1

DP
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InbreedingCoeff
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SIO_000300: -2.0e-4

QD
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MQ
type: SiteQuality
SIO_000300: 5.97e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.735207357279195e-4
allele num: 11526
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.013863773357444e-5
allele num: 66360
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 2.23e-1

ClippingRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -3.0e-4

BaseQRankSum
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QD
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MQRankSum
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FS
type: SiteQuality
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DP
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MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.507522537461935e-5
allele num: 66334
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
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SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

DP
type: SiteQuality
SIO_000300: 3.652514e6

VQSLOD
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SIO_000300: 2.04e-1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 3.873e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.77e-1

MQ
type: SiteQuality
SIO_000300: 5.935e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 2
allele frequency: 1.735809755250825e-4
allele num: 11522
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.507431637975218e-5
allele num: 66338
num of homozygotes: 0

East Asian
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allele num: 8620
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South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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DP
type: SiteQuality
SIO_000300: 3.652317e6

ClippingRankSum
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BaseQRankSum
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SIO_000300: 6.18e0

VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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FS
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SIO_000300: 0.0e0

QD
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MQRankSum
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SIO_000300: -4.44e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.509889778046203e-5
allele num: 66230
num of homozygotes: 0

South Asian
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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FS
type: SiteQuality
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MQ
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BaseQRankSum
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DP
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QD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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