16-57181557-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181557
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181557
    reference: chr 16
allele count: 1
allele frequency: 8.405904307185366e-6
allele num: 118964
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.1972C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.1634C>T
  hgvsp: ENSP00000439018.2:p.Ser545Leu
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.1634C>T
  hgvsp: ENSP00000290776.8:p.Ser545Leu
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.1634C>T
  hgvsp: ENSP00000456042.1:p.Ser545Leu
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.777C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.1328C>T
  hgvsp: ENSP00000445468.1:p.Ser443Leu
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.617C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3127C>T
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28445
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39527
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser545Leu
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

16-57181558-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181558
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181558
    reference: chr 16
allele count: 2
allele frequency: 1.681520094165125e-5
allele num: 118940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3128G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.1635G>A
  hgvsp: ENST00000565874.1:c.1635G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.1635G>A
  hgvsp: ENST00000535318.2:c.1635G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.1973G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.1329G>A
  hgvsp: ENST00000537605.1:c.1329G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.618G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.1635G>A
  hgvsp: ENST00000290776.8:c.1635G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.778G>A
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2294
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39738
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser545Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-57181559-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181559
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181559
    reference: chr 16
allele count: 1
allele frequency: 8.455372543714276e-6
allele num: 118268
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.1636G>A
  hgvsp: ENSP00000439018.2:p.Glu546Lys
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.1330G>A
  hgvsp: ENSP00000445468.1:p.Glu444Lys
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.619G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.1974G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.1636G>A
  hgvsp: ENSP00000290776.8:p.Glu546Lys
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.1636G>A
  hgvsp: ENSP00000456042.1:p.Glu546Lys
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.779G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3129G>A
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11824
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37916
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3101
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu546Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

16-57181563-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181563
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181563
    reference: chr 16
allele count: 1
allele frequency: 8.457947087083023e-6
allele num: 118232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.1978C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.1334C>T
  hgvsp: ENSP00000445468.1:p.Pro445Leu
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.1640C>T
  hgvsp: ENSP00000439018.2:p.Pro547Leu
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.623C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.1640C>T
  hgvsp: ENSP00000290776.8:p.Pro547Leu
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.1640C>T
  hgvsp: ENSP00000456042.1:p.Pro547Leu
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.783C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3133C>T
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11762
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1306
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro547Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS

16-57181564-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181564
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181564
    reference: chr 16
allele count: 38
allele frequency: 3.223070398642917e-4
allele num: 117900
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.1335C>T
  hgvsp: ENST00000537605.1:c.1335C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.1641C>T
  hgvsp: ENST00000290776.8:c.1641C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.784C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3134C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.1641C>T
  hgvsp: ENST00000565874.1:c.1641C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.624C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.1979C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.1641C>T
  hgvsp: ENST00000535318.2:c.1641C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27781
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11705
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11379
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 9.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro547Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-57181577-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181577
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181577
    reference: chr 16
allele count: 63
allele frequency: 5.488952394228758e-4
allele num: 114776
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.1992G>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*7G>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*7G>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*7G>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*7G>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.797G>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3147G>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.637G>C
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24170
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8959
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11250
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7343
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32633
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-57181580-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181580
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181580
    reference: chr 16
allele count: 2
allele frequency: 1.753586083540841e-5
allele num: 114052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.640C>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*10C>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.1995C>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.800C>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3150C>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*10C>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*10C>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*10C>A
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11096
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8296
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8574
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32009
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

16-57181581-CCAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181581
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181578
    reference: chr 16
allele count: 1
allele frequency: 8.807158458394984e-6
allele num: 113544
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*20_*22delGCA
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*20_*22delGCA
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.2005_2007delGCA
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*20_*22delGCA
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*20_*22delGCA
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.650_652delGCA
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.810_812delGCA
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3160_3162delGCA
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8231
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30651
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: CCAG
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

16-57181582-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181582
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181582
    reference: chr 16
allele count: 1
allele frequency: 8.824723344923136e-6
allele num: 113318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*12C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.802C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*12C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3152C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.1997C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.642C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8090
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22290
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2525
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9035
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1643
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6144
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

16-57181586-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181586
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181586
    reference: chr 16
allele count: 4
allele frequency: 3.554102322605868e-5
allele num: 112546
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.2001A>G
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*16A>G
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*16A>G
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3156A>G
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*16A>G
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*16A>G
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.646A>G
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.806A>G
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10993
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20988
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28994
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

16-57181590-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181590
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181590
    reference: chr 16
allele count: 1
allele frequency: 9.005114905266191e-6
allele num: 111048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*20G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*20G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.650G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*20G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.2005G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.810G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*20G>A
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3160G>A
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18665
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9534
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3661
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4442
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

16-57181591-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181591
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181591
    reference: chr 16
allele count: 1
allele frequency: 9.03244454079052e-6
allele num: 110712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*21C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3161C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*21C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.651C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*21C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.811C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.2006C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*21C>T
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5697
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17933
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3862
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24763
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2724
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11939
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

16-57181593-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181593
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181593
    reference: chr 16
allele count: 1
allele frequency: 9.06059727457234e-6
allele num: 110368
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*23T>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.653T>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.813T>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.2008T>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*23T>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*23T>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3163T>C
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*23T>C
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6589
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1051
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4399
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

16-57181608-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181608
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181608
    reference: chr 16
allele count: 1
allele frequency: 9.656983930778738e-6
allele num: 103552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*38C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*38C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*38C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.668C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.828C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*38C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3178C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.2023C>T
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7487
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6893
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

16-57181610-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181610
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181609
    reference: chr 16
allele count: 3
allele frequency: 2.925288140881877e-5
allele num: 102554
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.2028delC
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3183delC
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*43delC
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*43delC
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*43delC
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.833delC
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.673delC
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*43delC
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7709
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16433
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17757
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6986
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8599
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5644
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: GC
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

16-57181615-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181615
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181615
    reference: chr 16
allele count: 1
allele frequency: 9.972078181092939e-6
allele num: 100280
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*45C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.835C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*45C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*45C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.2030C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3185C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.675C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*45C>T
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16495
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8792
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7253
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8674
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11631
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

16-57181616-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181616
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181616
    reference: chr 16
allele count: 3
allele frequency: 2.99096727881797e-5
allele num: 100302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3186C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*46C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.2031C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*46C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*46C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.836C>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.676C>T
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17455
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16387
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8829
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2987
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8643
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1188
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-57181621-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57181621
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57181621
    reference: chr 16
allele count: 1
allele frequency: 1.012576196358776e-5
allele num: 98758
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000567011
  gene symbol: CPNE2
  hgvsc: ENST00000567011.1:n.841G>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000445468
  ensembl transcript: ENST00000537605
  gene symbol: CPNE2
  hgvsc: ENST00000537605.1:c.*51G>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000565951
  gene symbol: CPNE2
  hgvsc: ENST00000565951.1:n.2036G>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566042
  gene symbol: CPNE2
  hgvsc: ENST00000566042.1:n.3191G>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000456042
  ensembl transcript: ENST00000565874
  gene symbol: CPNE2
  hgvsc: ENST00000565874.1:c.*51G>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000290776
  ensembl transcript: ENST00000290776
  gene symbol: CPNE2
  hgvsc: ENST00000290776.8:c.*51G>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000140848
  ensembl protein: ENSP00000439018
  ensembl transcript: ENST00000535318
  gene symbol: CPNE2
  hgvsc: ENST00000535318.2:c.*51G>T
  variant of: http://identifiers.org/hgnc/2315
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140848
  ensembl transcript: ENST00000566910
  gene symbol: CPNE2
  hgvsc: ENST00000566910.1:n.681G>T
  variant of: http://identifiers.org/hgnc/2315
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15980
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4518
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5642
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8702
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10663
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7318
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2789
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

16-57188153-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188153
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188153
    reference: chr 16
allele count: 2
allele frequency: 1.766129174687837e-5
allele num: 113242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*49G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*49G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*49G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*49G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*478G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*49G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*49G>A
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5398
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4789
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5036
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2966
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

16-57188154-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188154
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188154
    reference: chr 16
allele count: 40
allele frequency: 3.525409388165201e-4
allele num: 113462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*48C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*48C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*48C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*48C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*48C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*477C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*48C>T
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13087
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17811
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2996
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12670
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3097
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 9.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3623
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2887
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

16-57188158-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188158
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188158
    reference: chr 16
allele count: 6
allele frequency: 5.276487969607429e-5
allele num: 113712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*44G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*44G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*44G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*44G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*44G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*44G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*473G>A
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9531
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20754
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4577
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28902
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2616
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3621
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-57188159-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188159
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188159
    reference: chr 16
allele count: 17
allele frequency: 1.491751491751492e-4
allele num: 113960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*43C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*43C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*472C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*43C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*43C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*43C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*43C>T
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22557
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 13831
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7782
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8699
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4310
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3152
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31332
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4355
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2276
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/16-57188164-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188164
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188163
    reference: chr 16
allele count: 1
allele frequency: 8.738203425375743e-6
allele num: 114440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*37delG
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*466delG
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*37delG
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*37delG
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*37delG
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*37delG
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*37delG
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3072
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3188
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34976
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: AC
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

16-57188168-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188168
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188168
    reference: chr 16
allele count: 1
allele frequency: 8.716116098666435e-6
allele num: 114730
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*34A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*34A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*34A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*34A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*34A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*463A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*34A>G
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27938
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37745
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

16-57188172-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188172
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188172
    reference: chr 16
allele count: 1
allele frequency: 8.684928175643988e-6
allele num: 115142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*459C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*30C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*30C>T
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2670
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3434
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39898
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

16-57188178-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188178
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188178
    reference: chr 16
allele count: 1
allele frequency: 8.637070305752289e-6
allele num: 115780
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*24C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*24C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*453C>T
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16766
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3858
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4887
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41572
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

16-57188179-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188179
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188179
    reference: chr 16
allele count: 965
allele frequency: 8.327149094800063e-3
allele num: 115886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*23G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*452G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*23G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*23G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*23G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*23G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*23G>A
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 16991
  bin: 2.75e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 1.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 3.25e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 30303
  bin: 2.25e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 9.75e1
  variant carriers: 955
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4792
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41772
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 3
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

16-57188181-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188181
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188181
    reference: chr 16
allele count: 1
allele frequency: 8.595939278284938e-6
allele num: 116334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*21G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*450G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*21G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*21G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*21G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*21G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*21G>A
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3715
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44066
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5009
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2119
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ

16-57188188-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188188
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188188
    reference: chr 16
allele count: 3
allele frequency: 2.560382350430998e-5
allele num: 117170
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*14A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*14A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*14A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*14A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*14A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*443A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*14A>G
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

16-57188194-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188194
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188194
    reference: chr 16
allele count: 8
allele frequency: 6.80029241257374e-5
allele num: 117642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.*8G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*8G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*8G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*8G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*8G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*8G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*8G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*437G>A
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32652
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18972
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

16-57188195-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188195
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188195
    reference: chr 16
allele count: 32
allele frequency: 2.715592593221202e-4
allele num: 117838
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.*7C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.*7C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.*7C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.*7C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*436C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.*7C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.*7C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.*7C>T
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19152
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32652
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5279
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-57188207-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188207
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188207
    reference: chr 16
allele count: 1
allele frequency: 8.436113313874031e-6
allele num: 118538
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.760C>G
  hgvsp: ENSP00000374098.5:p.Pro254Ala
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.760C>G
  hgvsp: ENSP00000456211.1:p.Pro254Ala
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.458C>G
  hgvsp: ENSP00000454901.1:p.Pro154Ala
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.760C>G
  hgvsp: ENSP00000335808.6:p.Pro254Ala
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.760C>G
  hgvsp: ENSP00000457740.1:p.Pro254Ala
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.760C>G
  hgvsp: ENSP00000457850.1:p.Pro254Ala
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.529C>G
  hgvsp: ENSP00000457532.1:p.Pro177Ala
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*424C>G
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro254Ala
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP

16-57188213-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188213
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188213
    reference: chr 16
allele count: 1
allele frequency: 8.422045546422314e-6
allele num: 118736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.754G>A
  hgvsp: ENSP00000374098.5:p.Glu252Lys
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.754G>A
  hgvsp: ENSP00000456211.1:p.Glu252Lys
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.754G>A
  hgvsp: ENSP00000457740.1:p.Glu252Lys
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.523G>A
  hgvsp: ENSP00000457532.1:p.Glu175Lys
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.754G>A
  hgvsp: ENSP00000335808.6:p.Glu252Lys
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.452G>A
  hgvsp: ENSP00000454901.1:p.Glu152Lys
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*418G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.754G>A
  hgvsp: ENSP00000457850.1:p.Glu252Lys
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49028
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu252Lys
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

16-57188214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188214
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188214
    reference: chr 16
allele count: 1
allele frequency: 8.41651657212113e-6
allele num: 118814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.753C>T
  hgvsp: ENST00000389447.5:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.753C>T
  hgvsp: ENST00000309137.8:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.753C>T
  hgvsp: ENST00000569266.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*417C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.451C>T
  hgvsp: ENST00000565956.1:c.451C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.753C>T
  hgvsp: ENST00000567439.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.753C>T
  hgvsp: ENST00000564108.1:c.753C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.522C>T
  hgvsp: ENST00000566077.1:c.522C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20247
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu251Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

16-57188220-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188220
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188220
    reference: chr 16
allele count: 1
allele frequency: 8.400537634408602e-6
allele num: 119040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.747C>A
  hgvsp: ENST00000567439.1:c.747C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.747C>A
  hgvsp: ENST00000564108.1:c.747C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.516C>A
  hgvsp: ENST00000566077.1:c.516C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.747C>A
  hgvsp: ENST00000389447.5:c.747C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.747C>A
  hgvsp: ENST00000569266.1:c.747C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.445C>A
  hgvsp: ENST00000565956.1:c.445C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.747C>A
  hgvsp: ENST00000309137.8:c.747C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*411C>A
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33288
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5551
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr249Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS

16-57188221-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188221
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188221
    reference: chr 16
allele count: 1
allele frequency: 8.39898540256337e-6
allele num: 119062
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.746C>T
  hgvsp: ENSP00000374098.5:p.Thr249Ile
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.746C>T
  hgvsp: ENSP00000456211.1:p.Thr249Ile
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*410C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.746C>T
  hgvsp: ENSP00000457850.1:p.Thr249Ile
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.746C>T
  hgvsp: ENSP00000335808.6:p.Thr249Ile
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.515C>T
  hgvsp: ENSP00000457532.1:p.Thr172Ile
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.746C>T
  hgvsp: ENSP00000457740.1:p.Thr249Ile
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.444C>T
  hgvsp: ENSP00000454901.1:p.Thr149Ile
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49733
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr249Ile
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

16-57188224-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188224
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188224
    reference: chr 16
allele count: 21
allele frequency: 1.762632197414806e-4
allele num: 119140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*407A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.743A>G
  hgvsp: ENSP00000374098.5:p.Asn248Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.512A>G
  hgvsp: ENSP00000457532.1:p.Asn171Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.441A>G
  hgvsp: ENSP00000454901.1:p.Asn148Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.743A>G
  hgvsp: ENSP00000456211.1:p.Asn248Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.743A>G
  hgvsp: ENSP00000335808.6:p.Asn248Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.743A>G
  hgvsp: ENSP00000457740.1:p.Asn248Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.743A>G
  hgvsp: ENSP00000457850.1:p.Asn248Ser
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4110
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 20470
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 9.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 49779
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn248Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP

16-57188225-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188225
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188225
    reference: chr 16
allele count: 1
allele frequency: 8.390528771123156e-6
allele num: 119182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.742A>C
  hgvsp: ENSP00000374098.5:p.Asn248His
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.742A>C
  hgvsp: ENSP00000457740.1:p.Asn248His
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.440A>C
  hgvsp: ENSP00000454901.1:p.Asn148His
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.742A>C
  hgvsp: ENSP00000335808.6:p.Asn248His
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.511A>C
  hgvsp: ENSP00000457532.1:p.Asn171His
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.742A>C
  hgvsp: ENSP00000456211.1:p.Asn248His
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*406A>C
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.742A>C
  hgvsp: ENSP00000457850.1:p.Asn248His
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn248His
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ

16-57188238-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188238
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188238
    reference: chr 16
allele count: 1
allele frequency: 8.378296859814337e-6
allele num: 119356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*393C>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.729C>G
  hgvsp: ENST00000564108.1:c.729C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.729C>G
  hgvsp: ENST00000389447.5:c.729C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.729C>G
  hgvsp: ENST00000309137.8:c.729C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.427C>G
  hgvsp: ENST00000565956.1:c.427C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.498C>G
  hgvsp: ENST00000566077.1:c.498C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.729C>G
  hgvsp: ENST00000569266.1:c.729C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.729C>G
  hgvsp: ENST00000567439.1:c.729C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5601
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser243Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

16-57188240-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188240
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188240
    reference: chr 16
allele count: 1
allele frequency: 8.376191513242758e-6
allele num: 119386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*391T>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.727T>A
  hgvsp: ENSP00000457850.1:p.Ser243Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.727T>A
  hgvsp: ENSP00000374098.5:p.Ser243Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.727T>A
  hgvsp: ENSP00000457740.1:p.Ser243Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.425T>A
  hgvsp: ENSP00000454901.1:p.Ser143Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.496T>A
  hgvsp: ENSP00000457532.1:p.Ser166Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.727T>A
  hgvsp: ENSP00000335808.6:p.Ser243Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.727T>A
  hgvsp: ENSP00000456211.1:p.Ser243Thr
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser243Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

16-57188241-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188241
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188241
    reference: chr 16
allele count: 1
allele frequency: 8.374928813105088e-6
allele num: 119404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.726C>T
  hgvsp: ENST00000564108.1:c.726C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*390C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.726C>T
  hgvsp: ENST00000567439.1:c.726C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.726C>T
  hgvsp: ENST00000389447.5:c.726C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.424C>T
  hgvsp: ENST00000565956.1:c.424C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.726C>T
  hgvsp: ENST00000309137.8:c.726C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.726C>T
  hgvsp: ENST00000569266.1:c.726C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.495C>T
  hgvsp: ENST00000566077.1:c.495C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser242Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-57188249-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188249
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188249
    reference: chr 16
allele count: 1
allele frequency: 8.369181326682624e-6
allele num: 119486
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.487A>G
  hgvsp: ENSP00000457532.1:p.Ile163Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*382A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.718A>G
  hgvsp: ENSP00000456211.1:p.Ile240Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.416A>G
  hgvsp: ENSP00000454901.1:p.Ile140Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.718A>G
  hgvsp: ENSP00000457850.1:p.Ile240Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.718A>G
  hgvsp: ENSP00000335808.6:p.Ile240Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.718A>G
  hgvsp: ENSP00000457740.1:p.Ile240Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.718A>G
  hgvsp: ENSP00000374098.5:p.Ile240Val
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile240Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

16-57188255-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188255
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188255
    reference: chr 16
allele count: 2
allele frequency: 1.673472119954482e-5
allele num: 119512
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.712G>A
  hgvsp: ENSP00000335808.6:p.Gly238Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.712G>A
  hgvsp: ENSP00000374098.5:p.Gly238Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*376G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.410G>A
  hgvsp: ENSP00000454901.1:p.Gly138Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.712G>A
  hgvsp: ENSP00000456211.1:p.Gly238Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.712G>A
  hgvsp: ENSP00000457740.1:p.Gly238Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.712G>A
  hgvsp: ENSP00000457850.1:p.Gly238Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.481G>A
  hgvsp: ENSP00000457532.1:p.Gly161Arg
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly238Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

16-57188256-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188256
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188256
    reference: chr 16
allele count: 4
allele frequency: 3.346776217808196e-5
allele num: 119518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.711C>T
  hgvsp: ENST00000389447.5:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.409C>T
  hgvsp: ENST00000565956.1:c.409C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.711C>T
  hgvsp: ENST00000569266.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.711C>T
  hgvsp: ENST00000564108.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.480C>T
  hgvsp: ENST00000566077.1:c.480C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.711C>T
  hgvsp: ENST00000567439.1:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.711C>T
  hgvsp: ENST00000309137.8:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*375C>T
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr237Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

16-57188259-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188259
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188259
    reference: chr 16
allele count: 1
allele frequency: 8.365960579593749e-6
allele num: 119532
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.708C>A
  hgvsp: ENST00000564108.1:c.708C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*372C>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.406C>A
  hgvsp: ENST00000565956.1:c.406C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.708C>A
  hgvsp: ENST00000389447.5:c.708C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.477C>A
  hgvsp: ENST00000566077.1:c.477C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.708C>A
  hgvsp: ENST00000567439.1:c.708C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.708C>A
  hgvsp: ENST00000569266.1:c.708C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.708C>A
  hgvsp: ENST00000309137.8:c.708C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala236Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

16-57188260-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188260
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188260
    reference: chr 16
allele count: 2
allele frequency: 1.673024158468848e-5
allele num: 119544
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.476C>T
  hgvsp: ENSP00000457532.1:p.Ala159Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.707C>T
  hgvsp: ENSP00000456211.1:p.Ala236Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*371C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.707C>T
  hgvsp: ENSP00000374098.5:p.Ala236Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.707C>T
  hgvsp: ENSP00000457740.1:p.Ala236Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.405C>T
  hgvsp: ENSP00000454901.1:p.Ala136Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.707C>T
  hgvsp: ENSP00000335808.6:p.Ala236Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.707C>T
  hgvsp: ENSP00000457850.1:p.Ala236Val
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50100
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala236Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

16-57188265-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188265
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188265
    reference: chr 16
allele count: 2
allele frequency: 1.672408602869853e-5
allele num: 119588
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.702C>G
  hgvsp: ENSP00000335808.6:p.Ile234Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.471C>G
  hgvsp: ENSP00000457532.1:p.Ile157Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*366C>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.702C>G
  hgvsp: ENSP00000457740.1:p.Ile234Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.400C>G
  hgvsp: ENSP00000454901.1:p.Ile134Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.702C>G
  hgvsp: ENSP00000456211.1:p.Ile234Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.702C>G
  hgvsp: ENSP00000374098.5:p.Ile234Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.702C>G
  hgvsp: ENSP00000457850.1:p.Ile234Met
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile234Met
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

16-57188277-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188277
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188277
    reference: chr 16
allele count: 3
allele frequency: 2.50907448605791e-5
allele num: 119566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.459C>T
  hgvsp: ENST00000566077.1:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.690C>T
  hgvsp: ENST00000389447.5:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.690C>T
  hgvsp: ENST00000567439.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*354C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.690C>T
  hgvsp: ENST00000309137.8:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.388C>T
  hgvsp: ENST00000565956.1:c.388C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.690C>T
  hgvsp: ENST00000564108.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.690C>T
  hgvsp: ENST00000569266.1:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser230Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

16-57188281-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188281
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188281
    reference: chr 16
allele count: 1
allele frequency: 8.363161944267889e-6
allele num: 119572
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.686A>G
  hgvsp: ENSP00000335808.6:p.Asp229Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.686A>G
  hgvsp: ENSP00000457740.1:p.Asp229Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*350A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.686A>G
  hgvsp: ENSP00000457850.1:p.Asp229Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.455A>G
  hgvsp: ENSP00000457532.1:p.Asp152Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.686A>G
  hgvsp: ENSP00000456211.1:p.Asp229Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.686A>G
  hgvsp: ENSP00000374098.5:p.Asp229Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.384A>G
  hgvsp: ENSP00000454901.1:p.Asp129Gly
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20946
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp229Gly
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

16-57188289-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188289
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188289
    reference: chr 16
allele count: 18
allele frequency: 1.506150112961258e-4
allele num: 119510
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.678C>T
  hgvsp: ENST00000569266.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.678C>T
  hgvsp: ENST00000389447.5:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.678C>T
  hgvsp: ENST00000564108.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.447C>T
  hgvsp: ENST00000566077.1:c.447C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.376C>T
  hgvsp: ENST00000565956.1:c.376C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.678C>T
  hgvsp: ENST00000309137.8:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.678C>T
  hgvsp: ENST00000567439.1:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*342C>T
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4191
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49470
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser226Ser
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum

16-57188289-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188289
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188289
    reference: chr 16
allele count: 1
allele frequency: 8.367500627562547e-6
allele num: 119510
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.678C>G
  hgvsp: ENST00000569266.1:c.678C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.678C>G
  hgvsp: ENST00000567439.1:c.678C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.447C>G
  hgvsp: ENST00000566077.1:c.447C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*342C>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.678C>G
  hgvsp: ENST00000564108.1:c.678C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.376C>G
  hgvsp: ENST00000565956.1:c.376C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.678C>G
  hgvsp: ENST00000309137.8:c.678C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.678C>G
  hgvsp: ENST00000389447.5:c.678C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser226Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

16-57188309-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188309
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188309
    reference: chr 16
allele count: 1
allele frequency: 8.391655337931961e-6
allele num: 119166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.658G>A
  hgvsp: ENSP00000456211.1:p.Gly220Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*322G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.658G>A
  hgvsp: ENSP00000374098.5:p.Gly220Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.427G>A
  hgvsp: ENSP00000457532.1:p.Gly143Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.658G>A
  hgvsp: ENSP00000335808.6:p.Gly220Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.658G>A
  hgvsp: ENSP00000457740.1:p.Gly220Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.356G>A
  hgvsp: ENSP00000454901.1:p.Gly120Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.658G>A
  hgvsp: ENSP00000457850.1:p.Gly220Arg
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly220Arg
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/16-57188310-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188310
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188310
    reference: chr 16
allele count: 1
allele frequency: 8.38799510141086e-6
allele num: 119218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.426T>G
  hgvsp: ENST00000566077.1:c.426T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.657T>G
  hgvsp: ENST00000389447.5:c.657T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.657T>G
  hgvsp: ENST00000567439.1:c.657T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.355T>G
  hgvsp: ENST00000565956.1:c.355T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*321T>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.657T>G
  hgvsp: ENST00000564108.1:c.657T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.657T>G
  hgvsp: ENST00000569266.1:c.657T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.657T>G
  hgvsp: ENST00000309137.8:c.657T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser219Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

16-57188311-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188311
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188311
    reference: chr 16
allele count: 2
allele frequency: 1.678105754224631e-5
allele num: 119182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.656C>T
  hgvsp: ENSP00000456211.1:p.Ser219Phe
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.656C>T
  hgvsp: ENSP00000335808.6:p.Ser219Phe
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.656C>T
  hgvsp: ENSP00000457740.1:p.Ser219Phe
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.354C>T
  hgvsp: ENSP00000454901.1:p.Ser119Phe
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.656C>T
  hgvsp: ENSP00000457850.1:p.Ser219Phe
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.656C>T
  hgvsp: ENSP00000374098.5:p.Ser219Phe
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.425C>T
  hgvsp: ENSP00000457532.1:p.Ser142Phe
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*320C>T
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser219Phe
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

16-57188317-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188317
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188317
    reference: chr 16
allele count: 7
allele frequency: 5.878894767783657e-5
allele num: 119070
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*314C>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.650C>G
  hgvsp: ENSP00000457850.1:p.Ala217Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.650C>G
  hgvsp: ENSP00000335808.6:p.Ala217Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.650C>G
  hgvsp: ENSP00000456211.1:p.Ala217Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.650C>G
  hgvsp: ENSP00000457740.1:p.Ala217Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.650C>G
  hgvsp: ENSP00000374098.5:p.Ala217Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.348C>G
  hgvsp: ENSP00000454901.1:p.Ala117Gly
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.419C>G
  hgvsp: ENSP00000457532.1:p.Ala140Gly
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31332
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4097
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5303
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1184
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala217Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

16-57188325-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188325
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188325
    reference: chr 16
allele count: 1
allele frequency: 8.409155888931868e-6
allele num: 118918
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.642C>T
  hgvsp: ENST00000389447.5:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.340C>T
  hgvsp: ENST00000565956.1:c.340C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.642C>T
  hgvsp: ENST00000567439.1:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.411C>T
  hgvsp: ENST00000566077.1:c.411C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.642C>T
  hgvsp: ENST00000309137.8:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.642C>T
  hgvsp: ENST00000564108.1:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*306C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.642C>T
  hgvsp: ENST00000569266.1:c.642C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20981
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly214Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD

16-57188331-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188331
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188331
    reference: chr 16
allele count: 3
allele frequency: 2.526358338666757e-5
allele num: 118748
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.405C>T
  hgvsp: ENST00000566077.1:c.405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.636C>T
  hgvsp: ENST00000567439.1:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.636C>T
  hgvsp: ENST00000389447.5:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.636C>T
  hgvsp: ENST00000564108.1:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.334C>T
  hgvsp: ENST00000565956.1:c.334C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.636C>T
  hgvsp: ENST00000309137.8:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*300C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.636C>T
  hgvsp: ENST00000569266.1:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Leu212Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

16-57188336-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188336
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188336
    reference: chr 16
allele count: 1
allele frequency: 8.42800795603951e-6
allele num: 118652
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.631A>G
  hgvsp: ENSP00000457850.1:p.Ile211Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.400A>G
  hgvsp: ENSP00000457532.1:p.Ile134Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.329A>G
  hgvsp: ENSP00000454901.1:p.Ile111Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.631A>G
  hgvsp: ENSP00000457740.1:p.Ile211Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.631A>G
  hgvsp: ENSP00000456211.1:p.Ile211Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.631A>G
  hgvsp: ENSP00000374098.5:p.Ile211Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.631A>G
  hgvsp: ENSP00000335808.6:p.Ile211Val
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*295A>G
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile211Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

16-57188339-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188339
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188339
    reference: chr 16
allele count: 2
allele frequency: 1.687336539272758e-5
allele num: 118530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.628G>A
  hgvsp: ENSP00000457850.1:p.Gly210Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.628G>A
  hgvsp: ENSP00000335808.6:p.Gly210Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.628G>A
  hgvsp: ENSP00000374098.5:p.Gly210Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.628G>A
  hgvsp: ENSP00000456211.1:p.Gly210Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.628G>A
  hgvsp: ENSP00000457740.1:p.Gly210Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*292G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.326G>A
  hgvsp: ENSP00000454901.1:p.Gly110Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.397G>A
  hgvsp: ENSP00000457532.1:p.Gly133Ser
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1735
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Gly210Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum

16-57188340-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188340
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188340
    reference: chr 16
allele count: 2
allele frequency: 1.68827660723933e-5
allele num: 118464
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.627C>T
  hgvsp: ENST00000567439.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*291C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.627C>T
  hgvsp: ENST00000389447.5:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.396C>T
  hgvsp: ENST00000566077.1:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.627C>T
  hgvsp: ENST00000564108.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.627C>T
  hgvsp: ENST00000569266.1:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.325C>T
  hgvsp: ENST00000565956.1:c.325C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.627C>T
  hgvsp: ENST00000309137.8:c.627C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile209Ile
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

16-57188349-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188349
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188349
    reference: chr 16
allele count: 1
allele frequency: 8.459807454782329e-6
allele num: 118206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.618A>G
  hgvsp: ENST00000564108.1:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.618A>G
  hgvsp: ENST00000309137.8:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.618A>G
  hgvsp: ENST00000569266.1:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*282A>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.618A>G
  hgvsp: ENST00000389447.5:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.316A>G
  hgvsp: ENST00000565956.1:c.316A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.387A>G
  hgvsp: ENST00000566077.1:c.387A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.618A>G
  hgvsp: ENST00000567439.1:c.618A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2018
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47820
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala206Ala
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

16-57188352-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188352
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188352
    reference: chr 16
allele count: 1
allele frequency: 8.470843357164639e-6
allele num: 118052
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.313T>C
  hgvsp: ENST00000565956.1:c.313T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.615T>C
  hgvsp: ENST00000569266.1:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.615T>C
  hgvsp: ENST00000309137.8:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*279T>C
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.615T>C
  hgvsp: ENST00000567439.1:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.615T>C
  hgvsp: ENST00000389447.5:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.615T>C
  hgvsp: ENST00000564108.1:c.615T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.384T>C
  hgvsp: ENST00000566077.1:c.384T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala205Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

16-57188367-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188367
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188367
    reference: chr 16
allele count: 1
allele frequency: 8.550662676357418e-6
allele num: 116950
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.600C>G
  hgvsp: ENSP00000456211.1:p.Ile200Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.298C>G
  hgvsp: ENSP00000454901.1:p.Ile100Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.369C>G
  hgvsp: ENSP00000457532.1:p.Ile123Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*264C>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.600C>G
  hgvsp: ENSP00000374098.5:p.Ile200Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.600C>G
  hgvsp: ENSP00000457850.1:p.Ile200Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.600C>G
  hgvsp: ENSP00000457740.1:p.Ile200Met
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.600C>G
  hgvsp: ENSP00000335808.6:p.Ile200Met
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46983
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile200Met
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

16-57188368-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188368
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188368
    reference: chr 16
allele count: 1
allele frequency: 8.560324607509117e-6
allele num: 116818
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.368T>C
  hgvsp: ENSP00000457532.1:p.Ile123Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.599T>C
  hgvsp: ENSP00000335808.6:p.Ile200Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.599T>C
  hgvsp: ENSP00000374098.5:p.Ile200Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.599T>C
  hgvsp: ENSP00000456211.1:p.Ile200Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.599T>C
  hgvsp: ENSP00000457850.1:p.Ile200Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.599T>C
  hgvsp: ENSP00000457740.1:p.Ile200Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.297T>C
  hgvsp: ENSP00000454901.1:p.Ile100Thr
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*263T>C
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20995
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3126
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile200Thr
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

16-57188375-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188375
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188375
    reference: chr 16
allele count: 1
allele frequency: 8.649770781074301e-6
allele num: 115610
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.592C>T
  hgvsp: ENSP00000335808.6:p.Pro198Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.290C>T
  hgvsp: ENSP00000454901.1:p.Pro98Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.592C>T
  hgvsp: ENSP00000457740.1:p.Pro198Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.592C>T
  hgvsp: ENSP00000374098.5:p.Pro198Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*256C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.592C>T
  hgvsp: ENSP00000456211.1:p.Pro198Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.592C>T
  hgvsp: ENSP00000457850.1:p.Pro198Ser
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.361C>T
  hgvsp: ENSP00000457532.1:p.Pro121Ser
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3959
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28566
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro198Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

16-57188377-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188377
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188377
    reference: chr 16
allele count: 1
allele frequency: 8.6629589202488e-6
allele num: 115434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.288G>A
  hgvsp: ENSP00000454901.1:p.Gly97Asp
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.590G>A
  hgvsp: ENSP00000456211.1:p.Gly197Asp
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.590G>A
  hgvsp: ENSP00000457850.1:p.Gly197Asp
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.590G>A
  hgvsp: ENSP00000335808.6:p.Gly197Asp
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.359G>A
  hgvsp: ENSP00000457532.1:p.Gly120Asp
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*254G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.590G>A
  hgvsp: ENSP00000374098.5:p.Gly197Asp
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.590G>A
  hgvsp: ENSP00000457740.1:p.Gly197Asp
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45654
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4506
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly197Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

16-57188379-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188379
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188379
    reference: chr 16
allele count: 8
allele frequency: 6.950115545670947e-5
allele num: 115106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.357T>A
  hgvsp: ENSP00000457532.1:p.Ser119Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.588T>A
  hgvsp: ENSP00000456211.1:p.Ser196Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.588T>A
  hgvsp: ENSP00000374098.5:p.Ser196Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.286T>A
  hgvsp: ENSP00000454901.1:p.Ser96Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.588T>A
  hgvsp: ENSP00000457740.1:p.Ser196Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.588T>A
  hgvsp: ENSP00000457850.1:p.Ser196Arg
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*252T>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.588T>A
  hgvsp: ENSP00000335808.6:p.Ser196Arg
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20535
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28292
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4566
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser196Arg
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

16-57188380-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188380
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188380
    reference: chr 16
allele count: 2
allele frequency: 1.740341106856944e-5
allele num: 114920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.587G>A
  hgvsp: ENSP00000374098.5:p.Ser196Asn
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.587G>A
  hgvsp: ENSP00000456211.1:p.Ser196Asn
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.587G>A
  hgvsp: ENSP00000457740.1:p.Ser196Asn
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.587G>A
  hgvsp: ENSP00000457850.1:p.Ser196Asn
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.285G>A
  hgvsp: ENSP00000454901.1:p.Ser96Asn
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*251G>A
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.587G>A
  hgvsp: ENSP00000335808.6:p.Ser196Asn
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.356G>A
  hgvsp: ENSP00000457532.1:p.Ser119Asn
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28090
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4807
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser196Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS

16-57188382-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188382
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188382
    reference: chr 16
allele count: 2
allele frequency: 1.745962461807071e-5
allele num: 114550
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.283G>C
  hgvsp: ENST00000565956.1:c.283G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.585G>C
  hgvsp: ENST00000569266.1:c.585G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.585G>C
  hgvsp: ENST00000564108.1:c.585G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.585G>C
  hgvsp: ENST00000389447.5:c.585G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.354G>C
  hgvsp: ENST00000566077.1:c.354G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.585G>C
  hgvsp: ENST00000309137.8:c.585G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.585G>C
  hgvsp: ENST00000567439.1:c.585G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*249G>C
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5058
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu195Leu
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

16-57188397-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188397
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188397
    reference: chr 16
allele count: 434
allele frequency: 3.98992406273558e-3
allele num: 108774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.570C>T
  hgvsp: ENST00000564108.1:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.570C>T
  hgvsp: ENST00000567439.1:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.570C>T
  hgvsp: ENST00000569266.1:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.339C>T
  hgvsp: ENST00000566077.1:c.339C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.268C>T
  hgvsp: ENST00000565956.1:c.268C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*234C>T
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.570C>T
  hgvsp: ENST00000389447.5:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.570C>T
  hgvsp: ENST00000309137.8:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6039
  bin: 1.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 3.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 23312
  bin: 2.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 18761
  bin: 2.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 1.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39358
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3646
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 9.75e1
  variant carriers: 421
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 2
hgvs: p.Leu190Leu
num of homozygotes: 8
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ

16-57188397-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57188397
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 57188397
    reference: chr 16
allele count: 1
allele frequency: 9.19337341644143e-6
allele num: 108774
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000374098
  ensembl transcript: ENST00000389447
  gene symbol: FAM192A
  hgvsc: ENST00000389447.5:c.570C>G
  hgvsp: ENST00000389447.5:c.570C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000455082
  ensembl transcript: ENST00000566403
  gene symbol: FAM192A
  hgvsc: ENST00000566403.1:c.*234C>G
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457740
  ensembl transcript: ENST00000569266
  gene symbol: FAM192A
  hgvsc: ENST00000569266.1:c.570C>G
  hgvsp: ENST00000569266.1:c.570C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457532
  ensembl transcript: ENST00000566077
  gene symbol: FAM192A
  hgvsc: ENST00000566077.1:c.339C>G
  hgvsp: ENST00000566077.1:c.339C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000456211
  ensembl transcript: ENST00000564108
  gene symbol: FAM192A
  hgvsc: ENST00000564108.1:c.570C>G
  hgvsp: ENST00000564108.1:c.570C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000335808
  ensembl transcript: ENST00000309137
  gene symbol: FAM192A
  hgvsc: ENST00000309137.8:c.570C>G
  hgvsp: ENST00000309137.8:c.570C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000454901
  ensembl transcript: ENST00000565956
  gene symbol: FAM192A
  hgvsc: ENST00000565956.1:c.268C>G
  hgvsp: ENST00000565956.1:c.268C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000172775
  ensembl protein: ENSP00000457850
  ensembl transcript: ENST00000567439
  gene symbol: FAM192A
  hgvsc: ENST00000567439.1:c.570C>G
  hgvsp: ENST00000567439.1:c.570C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29856
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6039
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5615
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18761
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10312
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu190Leu
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1979
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9136
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65472
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180080245456691e-4
allele num: 8474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16022
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.466e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.643812e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.723e0

QD
type: SiteQuality
SIO_000300: 9.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.186e0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9120
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1319
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1956
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16028
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528164063693878e-5
allele num: 65438
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.123595505617978e-3
allele num: 890
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.55e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

DP
type: SiteQuality
SIO_000300: 1.642297e6

QD
type: SiteQuality
SIO_000300: 1.399e1

FS
type: SiteQuality
SIO_000300: 2.738e0

VQSLOD
type: SiteQuality
SIO_000300: 6.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

GenotypeQuality
all individuals: 119
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1313
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8455
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65122
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.185395922238028e-4
allele num: 8436
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.615486e6

VQSLOD
type: SiteQuality
SIO_000300: 4.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.347e0

QD
type: SiteQuality
SIO_000300: 1.109e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.12e-1

GenotypeQuality
all individuals: 8389
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1807
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2017
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39007
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536003932170066e-5
allele num: 65104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15818
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: -1.143e0

DP
type: SiteQuality
SIO_000300: 1.611622e6

QD
type: SiteQuality
SIO_000300: 1.591e1

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.127e0

FS
type: SiteQuality
SIO_000300: 1.1215e1

GenotypeQuality
all individuals: 8284
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3452
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38183
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.353240152477763e-5
allele num: 15740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.079291762894534e-5
allele num: 64950
num of homozygotes: 0

African
type: Population
allele count: 34
allele frequency: 3.389830508474576e-3
allele num: 10030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.764241893076249e-5
allele num: 11410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

VQSLOD
type: SiteQuality
SIO_000300: 3.95e0

DP
type: SiteQuality
SIO_000300: 1.602667e6

QD
type: SiteQuality
SIO_000300: 1.441e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

GenotypeQuality
all individuals: 1604
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1018
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6566
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 9.75e1
variant carriers: 63

GenotypeQuality
all individuals: 646
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7383
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.013993104846887e-4
allele num: 9862
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.176470588235294e-3
allele num: 850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 57
allele frequency: 8.997348150018942e-4
allele num: 63352
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.568879371877231e-4
allele num: 11208
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.34e-1

DP
type: SiteQuality
SIO_000300: 1.478281e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

QD
type: SiteQuality
SIO_000300: 1.562e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

GenotypeQuality
all individuals: 8145
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6378
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2202
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.17299149638279e-5
allele num: 63032
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14766
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 6.264e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 1.182e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.498e0

VQSLOD
type: SiteQuality
SIO_000300: 8.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

DP
type: SiteQuality
SIO_000300: 1.453035e6

GenotypeQuality
all individuals: 61
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2705
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11082
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.021033285685113e-4
allele num: 9794
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62764
num of homozygotes: 0

QD
type: SiteQuality
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ReadPosRankSum
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MQ
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SIO_000300: 5.706e1

ClippingRankSum
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DP
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InbreedingCoeff
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SIO_000300: -1.9e-3

FS
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MQRankSum
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VQSLOD
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 14626
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 1.027115858668858e-4
allele num: 9736
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6272
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.816182372772516e-5
allele num: 62290
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

FS
type: SiteQuality
SIO_000300: 9.904e0

InbreedingCoeff
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SIO_000300: -2.2e-3

QD
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MQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.381276e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.625646194362259e-5
allele num: 61514
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 10850
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.889e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

DP
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-1

QD
type: SiteQuality
SIO_000300: 1.138e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6210
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.629248264850598e-5
allele num: 61378
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 10832
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.948e-1

FS
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.12e-1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.933e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 13944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.634574520252378e-5
allele num: 61178
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9616
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10802
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6202
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.67e-1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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VQSLOD
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FS
type: SiteQuality
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BaseQRankSum
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MQ
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SIO_000300: 5.93e1

ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 12024
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East Asian
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allele frequency: 0.0e0
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Latino
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VQSLOD
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BaseQRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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MQ
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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Other
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East Asian
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allele frequency: 4.13564929693962e-4
allele num: 7254
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 57418
num of homozygotes: 0

Latino
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MQ
type: SiteQuality
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QD
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 56224
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Latino
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African
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VQSLOD
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FS
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ReadPosRankSum
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MQRankSum
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QD
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ClippingRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56244
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 4.25531914893617e-4
allele num: 7050
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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MQ
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FS
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QD
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 734
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.805054151624549e-5
allele num: 55400
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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MQRankSum
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FS
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VQSLOD
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MQ
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DP
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -9.19e-1

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 1.2465719272002e-4
allele num: 8022
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 9.314456035767511e-5
allele num: 10736
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63112
num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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InbreedingCoeff
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SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.45e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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allele frequency: 0.0e0
allele num: 8022
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African
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allele count: 36
allele frequency: 3.995560488346282e-3
allele num: 9010
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.582228410493339e-5
allele num: 63202
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6228
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Latino
type: Population
allele count: 3
allele frequency: 2.795378307864331e-4
allele num: 10732
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

BaseQRankSum
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SIO_000300: 2.45e0

DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
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Latino
type: Population
allele count: 1
allele frequency: 9.278159213212098e-5
allele num: 10778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.578631642092634e-5
allele num: 63346
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South Asian
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allele count: 1
allele frequency: 6.489292667099286e-5
allele num: 15410
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East Asian
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allele frequency: 0.0e0
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African
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allele count: 3
allele frequency: 3.309796999117388e-4
allele num: 9064
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.91e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.683e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.739e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.305369021721996e-5
allele num: 63438
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8062
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10834
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6242
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African
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allele count: 13
allele frequency: 1.434878587196468e-3
allele num: 9060
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South Asian
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -1.46e-1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 9.56e-1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
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ReadPosRankSum
type: SiteQuality
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DP
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10874
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570549063952758e-5
allele num: 63672
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
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Other
type: Population
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VQSLOD
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MQRankSum
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DP
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ClippingRankSum
type: SiteQuality
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QD
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InbreedingCoeff
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MQ
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ReadPosRankSum
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FS
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
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allele num: 63822
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European (Finnish)
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African
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South Asian
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East Asian
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Latino
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allele num: 10904
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Other
type: Population
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num of homozygotes: 0

DP
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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MQ
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FS
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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type: Population
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Latino
type: Population
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African
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.562158277876714e-5
allele num: 64014
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East Asian
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European (Finnish)
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South Asian
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BaseQRankSum
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QD
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FS
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InbreedingCoeff
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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Latino
type: Population
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South Asian
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allele frequency: 6.34517766497462e-5
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European (Non-Finnish)
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East Asian
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African
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -4.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.87e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.644e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.59e0

DP
type: SiteQuality
SIO_000300: 1.385242e6

GenotypeQuality
all individuals: 551
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 346
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 168
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 2286
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1387
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 820
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 74
allele frequency: 6.688358640636298e-3
allele num: 11064
num of homozygotes: 0

African
type: Population
allele count: 25
allele frequency: 2.719164672612573e-3
allele num: 9194
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.705882352941176e-3
allele num: 850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 769
allele frequency: 1.193951061979878e-2
allele num: 64408
num of homozygotes: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8266
num of homozygotes: 0

South Asian
type: Population
allele count: 74
allele frequency: 4.697816150330117e-3
allele num: 15752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 19
allele frequency: 2.991183879093199e-3
allele num: 6352
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.412e0

DP
type: SiteQuality
SIO_000300: 1.400062e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.348e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

GenotypeQuality
all individuals: 288
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15846
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547700117625209e-5
allele num: 64612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11114
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

DP
type: SiteQuality
SIO_000300: 1.40377e6

FS
type: SiteQuality
SIO_000300: 2.854e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.582e0

QD
type: SiteQuality
SIO_000300: 1.485e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 169
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1630
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5164
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 372
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.613823013749193e-5
allele num: 65022
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15956
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.429074e6

QD
type: SiteQuality
SIO_000300: 1.737e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-2

FS
type: SiteQuality
SIO_000300: 2.175e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

VQSLOD
type: SiteQuality
SIO_000300: -1.259e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.85e-1

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5217
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47015
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 620
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11298
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.150075252633842e-4
allele num: 9302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533177971298908e-5
allele num: 65224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.120319520718922e-4
allele num: 16024
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.732e0

DP
type: SiteQuality
SIO_000300: 1.445601e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

QD
type: SiteQuality
SIO_000300: 1.284e1

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

GenotypeQuality
all individuals: 403
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1292
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 234
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47187
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.072501072501073e-4
allele num: 9324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 31
allele frequency: 4.747174665400753e-4
allele num: 65302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.154e1

DP
type: SiteQuality
SIO_000300: 1.448847e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

FS
type: SiteQuality
SIO_000300: 1.45e0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

GenotypeQuality
all individuals: 983
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 133
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48601
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5412
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52452968259292e-5
allele num: 65594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

VQSLOD
type: SiteQuality
SIO_000300: -1.563e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.5e-1

FS
type: SiteQuality
SIO_000300: 1.595e0

QD
type: SiteQuality
SIO_000300: 5.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.37e-1

DP
type: SiteQuality
SIO_000300: 1.464064e6

GenotypeQuality
all individuals: 202
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5447
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.145526057030482e-5
allele num: 16272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65670
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 1.0026e1

DP
type: SiteQuality
SIO_000300: 1.470299e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

VQSLOD
type: SiteQuality
SIO_000300: -1.711e0

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

GenotypeQuality
all individuals: 176
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49274
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5499
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522116350573838e-5
allele num: 65698
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.78e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

FS
type: SiteQuality
SIO_000300: 2.771e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.471991e6

GenotypeQuality
all individuals: 784
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49742
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519295047098146e-5
allele num: 65820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.234e0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

DP
type: SiteQuality
SIO_000300: 1.475935e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.411e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5553
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.736676568233443e-5
allele num: 11446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.839e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.054e0

DP
type: SiteQuality
SIO_000300: 1.4762e6

QD
type: SiteQuality
SIO_000300: 1.192e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.807e0

VQSLOD
type: SiteQuality
SIO_000300: -1.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 163
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.884206691359524e-4
allele num: 65876
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.746114894360049e-4
allele num: 11454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.321e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.962e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.01e-1

FS
type: SiteQuality
SIO_000300: 1.207e0

DP
type: SiteQuality
SIO_000300: 1.478102e6

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 411
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variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517727051966974e-5
allele num: 65888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

FS
type: SiteQuality
SIO_000300: 7.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.12e-1

DP
type: SiteQuality
SIO_000300: 1.478167e6

QD
type: SiteQuality
SIO_000300: 1.388e1

MQ
type: SiteQuality
SIO_000300: 5.936e1

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 47
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GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65986
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.053518752633797e-4
allele num: 9492
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-2

QD
type: SiteQuality
SIO_000300: 1.465e1

MQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

DP
type: SiteQuality
SIO_000300: 1.481889e6

FS
type: SiteQuality
SIO_000300: 5.871e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQ
type: SiteQuality
SIO_000300: 5.93e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166861143523921e-4
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.482174e6

QD
type: SiteQuality
SIO_000300: 9.789999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.81e-1

FS
type: SiteQuality
SIO_000300: 8.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.462e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9498
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.097560975609756e-5
allele num: 16400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.462e1

MQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 2.802e0

DP
type: SiteQuality
SIO_000300: 1.482329e6

VQSLOD
type: SiteQuality
SIO_000300: 7.97e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.99e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 50091
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513637877274241e-5
allele num: 66066
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.887e0

DP
type: SiteQuality
SIO_000300: 1.48327e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.57e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

QD
type: SiteQuality
SIO_000300: 1.048e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66082
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166588894073728e-4
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.41e-1

DP
type: SiteQuality
SIO_000300: 1.483859e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.679999999999999e-1

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.07e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 165
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GenotypeQuality
all individuals: 1230
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GenotypeQuality
all individuals: 5609
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GenotypeQuality
all individuals: 163
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GenotypeQuality
all individuals: 695
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.333177788147457e-4
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.050640890943476e-4
allele num: 9518
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.513271390091099e-5
allele num: 66082
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 6.395e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

MQRankSum
type: SiteQuality
SIO_000300: -9.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.255e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1231
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512996641147457e-5
allele num: 66094
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9522
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.483919e6

QD
type: SiteQuality
SIO_000300: 1.363e1

MQRankSum
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VQSLOD
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SIO_000300: -1.73e0

MQ
type: SiteQuality
SIO_000300: 5.818e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.61e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

South Asian
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allele count: 2
allele frequency: 1.218620521569583e-4
allele num: 16412
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66098
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.936e0

MQRankSum
type: SiteQuality
SIO_000300: -4.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.44e0

FS
type: SiteQuality
SIO_000300: 1.4424e1

QD
type: SiteQuality
SIO_000300: 1.109e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.484128e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779794e-5
allele num: 66120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.484402e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

QD
type: SiteQuality
SIO_000300: 1.496e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-3

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 7.234e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 406
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.090875867949811e-5
allele num: 16418
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779794e-5
allele num: 66120
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.551e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.94e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.93e-1

DP
type: SiteQuality
SIO_000300: 1.483746e6

QD
type: SiteQuality
SIO_000300: 1.0e1

GenotypeQuality
all individuals: 128
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093102607847916e-5
allele num: 16412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66120
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

VQSLOD
type: SiteQuality
SIO_000300: 7.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 1.483593e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.106e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
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Latino
type: Population
allele count: 1
allele frequency: 8.715356458079135e-5
allele num: 11474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.815541031227306e-4
allele num: 66096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9570
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South Asian
type: Population
allele count: 5
allele frequency: 3.046922608165753e-4
allele num: 16410
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e-1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.481861e6

BaseQRankSum
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SIO_000300: -2.632e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

African
type: Population
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allele frequency: 1.044932079414838e-4
allele num: 9570
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Other
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66096
num of homozygotes: 0

FS
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
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South Asian
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allele count: 1
allele frequency: 6.108735491753207e-5
allele num: 16370
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65998
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East Asian
type: Population
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allele frequency: 0.0e0
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6378
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Latino
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allele num: 11418
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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DP
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MQ
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47995
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.106497313141182e-5
allele num: 16376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66028
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e0

FS
type: SiteQuality
SIO_000300: 4.868e0

DP
type: SiteQuality
SIO_000300: 1.472226e6

QD
type: SiteQuality
SIO_000300: 1.145e1

MQ
type: SiteQuality
SIO_000300: 5.88e1

VQSLOD
type: SiteQuality
SIO_000300: -2.312e0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.051e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e0

GenotypeQuality
all individuals: 429
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.221299462628236e-4
allele num: 16376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.504e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.782e0

VQSLOD
type: SiteQuality
SIO_000300: -2.399e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 5.678e0

QD
type: SiteQuality
SIO_000300: 1.045e1

DP
type: SiteQuality
SIO_000300: 1.471839e6

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 689
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 535
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.246589716684155e-4
allele num: 9530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.754693805930865e-4
allele num: 11398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.447e1

DP
type: SiteQuality
SIO_000300: 1.470018e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

FS
type: SiteQuality
SIO_000300: 3.793e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.02e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 416
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 516
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 380
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variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16324
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.072e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.857e0

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.67e-1

MQ
type: SiteQuality
SIO_000300: 6.029e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

DP
type: SiteQuality
SIO_000300: 1.469299e6

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 872
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.153247845280639e-4
allele num: 9514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65854
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.467476e6

MQ
type: SiteQuality
SIO_000300: 5.943e1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

FS
type: SiteQuality
SIO_000300: 7.317e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

QD
type: SiteQuality
SIO_000300: 1.167e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

GenotypeQuality
all individuals: 312
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 7.5e0
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GenotypeQuality
all individuals: 381
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 685
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 429
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GenotypeQuality
all individuals: 498
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variant carriers: 0

GenotypeQuality
all individuals: 861
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variant carriers: 0

GenotypeQuality
all individuals: 1682
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519156564275514e-5
allele num: 65826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.466656e6

FS
type: SiteQuality
SIO_000300: 7.339e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.332e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.040900106431504e-5
allele num: 65770
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.92e-1

QD
type: SiteQuality
SIO_000300: 1.1e1

VQSLOD
type: SiteQuality
SIO_000300: 9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.64e-1

FS
type: SiteQuality
SIO_000300: 7.447e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.468211e6

MQRankSum
type: SiteQuality
SIO_000300: 2.55e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 377
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.053296819043606e-4
allele num: 9494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52114390021296e-5
allele num: 65740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.621e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

DP
type: SiteQuality
SIO_000300: 1.468302e6

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1080
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GenotypeQuality
all individuals: 152
bin: 8.75e1
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GenotypeQuality
all individuals: 5100
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523554147114388e-5
allele num: 65636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6148
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9464
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.464197e6

QD
type: SiteQuality
SIO_000300: 1.119e1

VQSLOD
type: SiteQuality
SIO_000300: 9.330000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 1.294e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.59e-1

GenotypeQuality
all individuals: 844
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5078
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2119
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 363
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47836
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1077
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524901643843972e-5
allele num: 65578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16176
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.014e0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.047e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-2

QD
type: SiteQuality
SIO_000300: 1.51e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.462611e6

GenotypeQuality
all individuals: 680
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3024
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4858
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.28140703517588e-5
allele num: 15920
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5968
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65116
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

DP
type: SiteQuality
SIO_000300: 1.449408e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 9.57e0

MQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.5e-1

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 179
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4861
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
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variant carriers: 0

GenotypeQuality
all individuals: 46971
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variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.071352046282408e-4
allele num: 9334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65082
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e-1

DP
type: SiteQuality
SIO_000300: 1.447841e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 1.121e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.066e0

QD
type: SiteQuality
SIO_000300: 1.248e1

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4187
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variant carriers: 0

GenotypeQuality
all individuals: 418
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variant carriers: 0

GenotypeQuality
all individuals: 495
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variant carriers: 0

GenotypeQuality
all individuals: 146
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variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 928
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variant carriers: 0

GenotypeQuality
all individuals: 552
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variant carriers: 0

GenotypeQuality
all individuals: 680
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variant carriers: 1

GenotypeQuality
all individuals: 316
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45354
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4607
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54933068914229e-5
allele num: 64544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.07e-1

DP
type: SiteQuality
SIO_000300: 1.429562e6

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.2e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.151e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeQuality
all individuals: 429
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
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variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 4225
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variant carriers: 0

GenotypeQuality
all individuals: 246
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variant carriers: 0

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 511
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variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 501
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 900
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.082251082251082e-4
allele num: 9240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.626e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.651e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 8.087999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 1.746e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 1.429681e6

MQ
type: SiteQuality
SIO_000300: 5.825e1

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45480
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4485
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 553
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variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15422
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.201923076923077e-3
allele num: 832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.088274618326545e-4
allele num: 64322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11086
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9212
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.203e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.423873e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.776e0

MQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

GenotypeQuality
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45135
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5752
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.174858634188778e-4
allele num: 9196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15366
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.420136e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.228e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.82e-1

QD
type: SiteQuality
SIO_000300: 1.379e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

FS
type: SiteQuality
SIO_000300: 1.051e0

GenotypeQuality
all individuals: 462
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4357
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 446
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variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.120319520718922e-5
allele num: 64096
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQRankSum
type: SiteQuality
SIO_000300: -2.24e-1

QD
type: SiteQuality
SIO_000300: 1.123e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 3.146e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

DP
type: SiteQuality
SIO_000300: 1.41663e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.63e-1

MQ
type: SiteQuality
SIO_000300: 5.929e1

GenotypeQuality
all individuals: 954
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1004
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 108
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 648
bin: 7.25e1
variant carriers: 1

Latino
type: Population
allele count: 20
allele frequency: 1.912777352716144e-3
allele num: 10456
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.610966057441253e-3
allele num: 766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8184
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.429388221841052e-4
allele num: 13992
num of homozygotes: 0

African
type: Population
allele count: 404
allele frequency: 4.620311070448307e-2
allele num: 8744
num of homozygotes: 8

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.158736374910254e-5
allele num: 61284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.869857890800299e-4
allele num: 5348
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

DP
type: SiteQuality
SIO_000300: 1.332751e6

FS
type: SiteQuality
SIO_000300: 1.305e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.74e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.45e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.232e0

QD
type: SiteQuality
SIO_000300: 1.265e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 108
bin: 8.75e1
variant carriers: 0