13-20411877-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411877
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411877
    reference: chr 13
allele count: 1
allele frequency: 8.275953389830508e-6
allele num: 120832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.813G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.927G>A
  hgvsp: ENST00000502168.2:c.927G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.957G>A
  hgvsp: ENST00000382905.4:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1152G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.1064G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.*44G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1350G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.957G>A
  hgvsp: ENST00000337963.4:c.957G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9480
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5283
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu319Leu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

13-20411888-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411888
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411888
    reference: chr 13
allele count: 2
allele frequency: 1.654752449033625e-5
allele num: 120864
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.946A>T
  hgvsp: ENSP00000337034.4:p.Thr316Ser
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.916A>T
  hgvsp: ENSP00000445779.1:p.Thr306Ser
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.*33A>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.946A>T
  hgvsp: ENSP00000372361.4:p.Thr316Ser
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1339A>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.1053A>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.802A>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1141A>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9105
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2979
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr316Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

13-20411892-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411892
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411892
    reference: chr 13
allele count: 1
allele frequency: 8.273351534706709e-6
allele num: 120870
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1335T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.798T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.942T>C
  hgvsp: ENST00000337963.4:c.942T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.*29T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1137T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.912T>C
  hgvsp: ENST00000502168.2:c.912T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.942T>C
  hgvsp: ENST00000382905.4:c.942T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.1049T>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14670
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3893
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2776
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32905
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Tyr314Tyr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

13-20411907-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411907
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411907
    reference: chr 13
allele count: 1
allele frequency: 8.276775368316504e-6
allele num: 120820
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.927C>T
  hgvsp: ENST00000382905.4:c.927C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.783C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.*14C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.1034C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.927C>T
  hgvsp: ENST00000337963.4:c.927C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1122C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.897C>T
  hgvsp: ENST00000502168.2:c.897C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1320C>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2956
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser309Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

13-20411907-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411907
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411907
    reference: chr 13
allele count: 1
allele frequency: 8.276775368316504e-6
allele num: 120820
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1122C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1320C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.*14C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.897C>G
  hgvsp: ENST00000502168.2:c.897C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.927C>G
  hgvsp: ENST00000337963.4:c.927C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.927C>G
  hgvsp: ENST00000382905.4:c.927C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.783C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.1034C>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21789
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33049
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5291
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser309Ser
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

13-20411921-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411921
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411921
    reference: chr 13
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.913G>C
  hgvsp: ENSP00000372361.4:p.Glu305Gln
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.913G>C
  hgvsp: ENSP00000337034.4:p.Glu305Gln
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.1020G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.769G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.627G>C
  hgvsp: ENSP00000372364.4:p.Ter209TyrextTer40
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1108G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.883G>C
  hgvsp: ENSP00000445779.1:p.Glu295Gln
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1306G>C
  variant of: http://identifiers.org/hgnc/13029
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2771
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ter209TyrextTer40
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD

13-20411925-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411925
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411925
    reference: chr 13
allele count: 1
allele frequency: 8.286377195889957e-6
allele num: 120680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.623A>C
  hgvsp: ENSP00000372364.4:p.Gln208Pro
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1104A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1302A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.765A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.909A>C
  hgvsp: ENST00000337963.4:c.909A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.1016A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.879A>C
  hgvsp: ENST00000502168.2:c.879A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.909A>C
  hgvsp: ENST00000382905.4:c.909A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln208Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

13-20411933-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411933
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411933
    reference: chr 13
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.615A>C
  hgvsp: ENST00000382907.4:c.615A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.901A>C
  hgvsp: ENSP00000372361.4:p.Ile301Leu
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.901A>C
  hgvsp: ENSP00000337034.4:p.Ile301Leu
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.871A>C
  hgvsp: ENSP00000445779.1:p.Ile291Leu
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.1008A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.757A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1294A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1096A>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3875
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile301Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

13-20411939-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411939
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411939
    reference: chr 13
allele count: 303
allele frequency: 2.515859045468132e-3
allele num: 120436
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.895A>C
  hgvsp: ENSP00000372361.4:p.Asn299His
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1090A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1288A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.609A>C
  hgvsp: ENST00000382907.4:c.609A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.1002A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.865A>C
  hgvsp: ENSP00000445779.1:p.Asn289His
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.895A>C
  hgvsp: ENSP00000337034.4:p.Asn299His
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.751A>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 6.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 4.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 21624
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 14544
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 9.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 9725
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1493
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn299His
num of homozygotes: 3
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/13-20411942-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411942
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411942
    reference: chr 13
allele count: 1
allele frequency: 8.306199747491528e-6
allele num: 120392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.892G>T
  hgvsp: ENSP00000337034.4:p.Ala298Ser
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.606G>T
  hgvsp: ENSP00000372364.4:p.Arg202Ser
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.748G>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.862G>T
  hgvsp: ENSP00000445779.1:p.Ala288Ser
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.892G>T
  hgvsp: ENSP00000372361.4:p.Ala298Ser
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1087G>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1285G>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.999G>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2920
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3848
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8968
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala298Ser
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD

13-20411942-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411942
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411942
    reference: chr 13
allele count: 1
allele frequency: 8.306199747491528e-6
allele num: 120392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1285G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.606G>C
  hgvsp: ENSP00000372364.4:p.Arg202Ser
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.892G>C
  hgvsp: ENSP00000337034.4:p.Ala298Pro
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.999G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.892G>C
  hgvsp: ENSP00000372361.4:p.Ala298Pro
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.862G>C
  hgvsp: ENSP00000445779.1:p.Ala288Pro
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1087G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.748G>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2747
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5295
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala298Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

13-20411943-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411943
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411943
    reference: chr 13
allele count: 1
allele frequency: 8.306475728477921e-6
allele num: 120388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.891G>A
  hgvsp: ENST00000337963.4:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.891G>A
  hgvsp: ENST00000382905.4:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.747G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.861G>A
  hgvsp: ENST00000502168.2:c.861G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1086G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.605G>A
  hgvsp: ENSP00000372364.4:p.Arg202Lys
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1284G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.998G>A
  variant of: http://identifiers.org/hgnc/13029
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6148
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21720
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14548
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2747
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg202Lys
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS

13-20411950-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411950
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411950
    reference: chr 13
allele count: 3
allele frequency: 2.494678020223523e-5
allele num: 120256
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.884C>T
  hgvsp: ENSP00000372361.4:p.Thr295Ile
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1079C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1277C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.598C>T
  hgvsp: ENSP00000372364.4:p.Gln200Ter
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.740C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.991C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.884C>T
  hgvsp: ENSP00000337034.4:p.Thr295Ile
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.854C>T
  hgvsp: ENSP00000445779.1:p.Thr285Ile
  variant of: http://identifiers.org/hgnc/13029
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9665
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3832
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8951
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2744
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln200Ter
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

13-20411952-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411952
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411951
    reference: chr 13
allele count: 1
allele frequency: 8.319882856049386e-6
allele num: 120194
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.595delC
  hgvsp: ENSP00000372364.4:p.Leu199TyrfsTer5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.988delC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.851delC
  hgvsp: ENSP00000445779.1:p.Ser284LeufsTer11
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.881delC
  hgvsp: ENSP00000337034.4:p.Ser294LeufsTer11
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.737delC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1076delC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.881delC
  hgvsp: ENSP00000372361.4:p.Ser294LeufsTer11
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1274delC
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3831
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5290
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33013
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser294LeufsTer11
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: AG
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

13-20411959-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411959
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411959
    reference: chr 13
allele count: 1
allele frequency: 8.331250520703158e-6
allele num: 120030
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.589A>T
  hgvsp: ENSP00000372364.4:p.Met197Leu
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.875A>T
  hgvsp: ENSP00000372361.4:p.Asp292Val
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.875A>T
  hgvsp: ENSP00000337034.4:p.Asp292Val
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.731A>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.845A>T
  hgvsp: ENSP00000445779.1:p.Asp282Val
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1070A>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.982A>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1268A>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp292Val
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

13-20411975-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411975
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411974
    reference: chr 13
allele count: 2
allele frequency: 1.676164934629567e-5
allele num: 119320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-15delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-15delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-15delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-15delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-15delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-15delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-15delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-15delT
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6112
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2041
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5283
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1124
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: GA
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

13-20411977-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411977
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411977
    reference: chr 13
allele count: 1
allele frequency: 8.390387971539804e-6
allele num: 119184
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-16A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-16A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-16A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-16A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-16A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-16A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-16A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-16A>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

13-20411978-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411978
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411978
    reference: chr 13
allele count: 1
allele frequency: 8.393345755485052e-6
allele num: 119142
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-17T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-17T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-17T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-17T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-17T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-17T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-17T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-17T>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5283
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31182
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

13-20411985-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411985
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411985
    reference: chr 13
allele count: 1
allele frequency: 8.421052631578947e-6
allele num: 118750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-24A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-24A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-24A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-24A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-24A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-24A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-24A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-24A>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3376
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5281
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3712
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

13-20411985-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411985
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411984
    reference: chr 13
allele count: 1
allele frequency: 8.421052631578947e-6
allele num: 118750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-25delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-25delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-25delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-25delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-25delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-25delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-25delT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-25delT
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7763
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8514
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2758
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5281
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: TA
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

13-20411992-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411992
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411992
    reference: chr 13
allele count: 2
allele frequency: 1.688647224708286e-5
allele num: 118438
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-31T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-31T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-31T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-31T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-31T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-31T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-31T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-31T>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18166
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8070
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2706
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4799
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

13-20411998-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411998
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411998
    reference: chr 13
allele count: 1
allele frequency: 8.481188723411473e-6
allele num: 117908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-37G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-37G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-37G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-37G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-37G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-37G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-37G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-37G>A
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4970
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16202
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7639
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2645
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

13-20411999-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20411999
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20411999
    reference: chr 13
allele count: 1
allele frequency: 8.494300324482272e-6
allele num: 117726
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-38A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-38A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-38A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-38A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-38A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-38A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-38A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-38A>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2857
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5318
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3594
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7482
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

13-20412000-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412000
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412000
    reference: chr 13
allele count: 1
allele frequency: 8.497476249553883e-6
allele num: 117682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-39C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-39C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-39C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-39C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-39C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-39C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-39C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-39C>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5967
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5324
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2450
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3580
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

13-20412002-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412002
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412002
    reference: chr 13
allele count: 156
allele frequency: 1.330059341109065e-3
allele num: 117288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-41T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-41T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-41T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-41T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-41T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-41T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-41T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-41T>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12047
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 4.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 13906
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5756
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19743
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

13-20412008-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412008
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412008
    reference: chr 13
allele count: 1
allele frequency: 8.675886241779598e-6
allele num: 115262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-47T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.843-47T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.873-47T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.873-47T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.729-47T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-47T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-47T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1266-47T>A
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7762
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9936
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11641
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13577
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3789
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4965
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4281
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1655
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

13-20412790-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412790
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412790
    reference: chr 13
allele count: 1
allele frequency: 8.406328283932143e-6
allele num: 118958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-829T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-829T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+50T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+50T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-829T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+50T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+50T>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+50T>A
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6537
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29524
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3336
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS

13-20412790-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412790
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412789
    reference: chr 13
allele count: 1
allele frequency: 8.406328283932143e-6
allele num: 118958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+49delA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+49delA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-830delA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+49delA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+49delA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-830delA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-830delA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+49delA
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: AT
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

13-20412791-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412791
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412791
    reference: chr 13
allele count: 1
allele frequency: 8.406610958858046e-6
allele num: 118954
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-830A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-830A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+49A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+49A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+49A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+49A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-830A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+49A>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29529
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6815
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD

13-20412793-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412793
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412793
    reference: chr 13
allele count: 1
allele frequency: 8.411843876177658e-6
allele num: 118880
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+47G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+47G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-832G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-832G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-832G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+47G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+47G>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+47G>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3312
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3407
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3645
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

13-20412795-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412795
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412795
    reference: chr 13
allele count: 1
allele frequency: 8.39898540256337e-6
allele num: 119062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-834T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+45T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-834T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+45T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-834T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+45T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+45T>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+45T>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7910
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3350
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1969
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29551
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

13-20412800-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412800
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412800
    reference: chr 13
allele count: 3
allele frequency: 2.518637920612533e-5
allele num: 119112
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+40A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-839A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-839A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-839A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+40A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+40A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+40A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+40A>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5407
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7924
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7110
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1984
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29559
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3702
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/13-20412804-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412804
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412805
    reference: chr 13
allele count: 1
allele frequency: 8.39348665435622e-6
allele num: 119140
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+35dupT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-844dupT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-844dupT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+35dupT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-844dupT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+35dupT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+35dupT
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+35dupT
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7935
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5407
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29573
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

13-20412810-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412810
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412810
    reference: chr 13
allele count: 1
allele frequency: 8.362882183715796e-6
allele num: 119576
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-849A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-849A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+30A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+30A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+30A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-849A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+30A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+30A>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10450
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

13-20412810-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412810
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412810
    reference: chr 13
allele count: 1
allele frequency: 8.362882183715796e-6
allele num: 119576
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-849A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+30A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+30A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+30A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+30A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-849A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+30A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-849A>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2489
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3468
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29583
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

13-20412819-ATGTTGAAAGGTACTGCTTACTTTTTACATATTATGCTTCG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412819
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412779
    reference: chr 13
allele count: 1
allele frequency: 8.313657676831499e-6
allele num: 120284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: splice donor
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8887
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3914
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2013
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3421
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3478
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: ATGTTGAAAGGTACTGCTTACTTTTTACATATTATGCTTCG
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

13-20412821-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412821
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412821
    reference: chr 13
allele count: 1
allele frequency: 8.302751531857658e-6
allele num: 120442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+19C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-860C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+19C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+19C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+19C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-860C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+19C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-860C>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3928
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3423
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

13-20412821-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412821
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412821
    reference: chr 13
allele count: 2
allele frequency: 1.660550306371532e-5
allele num: 120442
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+19C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-860C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+19C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+19C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-860C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+19C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+19C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-860C>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8694
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29604
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3423
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

13-20412822-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412822
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412822
    reference: chr 13
allele count: 17
allele frequency: 1.410530857436816e-4
allele num: 120522
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+18A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+18A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+18A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-861A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-861A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+18A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+18A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-861A>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8906
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3407
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3481
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ

13-20412822-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412822
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412822
    reference: chr 13
allele count: 1
allele frequency: 8.297240337863626e-6
allele num: 120522
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+18A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+18A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-861A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+18A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-861A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-861A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+18A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+18A>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29612
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

13-20412824-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412824
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412824
    reference: chr 13
allele count: 102
allele frequency: 8.454766996568359e-4
allele num: 120642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+16C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-863C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-863C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-863C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+16C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+16C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+16C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+16C>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8908
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8685
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7961
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8793
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11917
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD

13-20412829-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412829
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412829
    reference: chr 13
allele count: 2
allele frequency: 1.653329806229747e-5
allele num: 120968
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+11C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-868C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+11C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+11C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+11C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-868C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+11C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-868C>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8820
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3425
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2061
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

13-20412833-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412833
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412833
    reference: chr 13
allele count: 1
allele frequency: 8.25218682950982e-6
allele num: 121180
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-872A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.872+7A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-872A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-872A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.842+7A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.728+7A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1265+7A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.872+7A>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8977
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4009
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29641
  bin: 9.75e1
  variant carriers: 1
hgvs: c.872+7A>G
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-20412841-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412841
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412841
    reference: chr 13
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.871A>C
  hgvsp: ENSP00000337034.4:p.Lys291Gln
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1264A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-880A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.871A>C
  hgvsp: ENSP00000372361.4:p.Lys291Gln
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.727A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-880A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.841A>C
  hgvsp: ENSP00000445779.1:p.Lys281Gln
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-880A>C
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29644
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3444
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys291Gln
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

13-20412843-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412843
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412843
    reference: chr 13
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-882A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.839A>G
  hgvsp: ENSP00000445779.1:p.Lys280Arg
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.869A>G
  hgvsp: ENSP00000337034.4:p.Lys290Arg
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-882A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-882A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.869A>G
  hgvsp: ENSP00000372361.4:p.Lys290Arg
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1262A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.725A>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9018
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2071
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29643
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys290Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

13-20412847-ATAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412847
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412844
    reference: chr 13
allele count: 14
allele frequency: 1.153649653081069e-4
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1255_1257delATA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-889_587-887delATA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.862_864delATA
  hgvsp: ENSP00000372361.4:p.Ile288del
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.862_864delATA
  hgvsp: ENSP00000337034.4:p.Ile288del
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-889_1068-887delATA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.718_720delATA
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.832_834delATA
  hgvsp: ENSP00000445779.1:p.Ile278del
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-889_980-887delATA
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3487
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12498
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4021
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile288del
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: ATAT
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

13-20412855-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412855
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412855
    reference: chr 13
allele count: 6
allele frequency: 4.94266508501384e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-894G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1250G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.827G>A
  hgvsp: ENSP00000445779.1:p.Ser276Asn
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.857G>A
  hgvsp: ENSP00000337034.4:p.Ser286Asn
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.713G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.857G>A
  hgvsp: ENSP00000372361.4:p.Ser286Asn
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-894G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-894G>A
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5425
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3435
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3439
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3487
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser286Asn
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

13-20412858-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412858
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412858
    reference: chr 13
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.710G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-897G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1247G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-897G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.854G>A
  hgvsp: ENSP00000372361.4:p.Arg285Gln
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-897G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.824G>A
  hgvsp: ENSP00000445779.1:p.Arg275Gln
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.854G>A
  hgvsp: ENSP00000337034.4:p.Arg285Gln
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4025
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg285Gln
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

13-20412858-CGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412858
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412856
    reference: chr 13
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.822_823delAC
  hgvsp: ENSP00000445779.1:p.Arg275LysfsTer5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.708_709delAC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-899_1068-898delAC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.852_853delAC
  hgvsp: ENSP00000372361.4:p.Arg285LysfsTer5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.852_853delAC
  hgvsp: ENSP00000337034.4:p.Arg285LysfsTer5
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-899_980-898delAC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-899_587-898delAC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1245_1246delAC
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg285LysfsTer5
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: CGT
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ

13-20412859-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412859
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412859
    reference: chr 13
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-898C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-898C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.853C>G
  hgvsp: ENSP00000337034.4:p.Arg285Gly
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.709C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1246C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.853C>G
  hgvsp: ENSP00000372361.4:p.Arg285Gly
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.823C>G
  hgvsp: ENSP00000445779.1:p.Arg275Gly
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-898C>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3434
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg285Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP

13-20412870-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412870
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412870
    reference: chr 13
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.842C>T
  hgvsp: ENSP00000372361.4:p.Thr281Ile
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.812C>T
  hgvsp: ENSP00000445779.1:p.Thr271Ile
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.842C>T
  hgvsp: ENSP00000337034.4:p.Thr281Ile
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-909C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.698C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-909C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1235C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-909C>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr281Ile
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-20412874-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412874
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412874
    reference: chr 13
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-913C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.808C>T
  hgvsp: ENSP00000445779.1:p.Arg270Cys
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.694C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.838C>T
  hgvsp: ENSP00000337034.4:p.Arg280Cys
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1231C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.838C>T
  hgvsp: ENSP00000372361.4:p.Arg280Cys
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-913C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-913C>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3433
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29654
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12548
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg280Cys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

13-20412879-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412879
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412879
    reference: chr 13
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.689A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-918A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-918A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.833A>G
  hgvsp: ENSP00000372361.4:p.His278Arg
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1226A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.833A>G
  hgvsp: ENSP00000337034.4:p.His278Arg
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.803A>G
  hgvsp: ENSP00000445779.1:p.His268Arg
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-918A>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3490
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His278Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-20412879-TGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412879
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412877
    reference: chr 13
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-920_980-919delTC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.831_832delTC
  hgvsp: ENSP00000337034.4:p.His278Ter
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.831_832delTC
  hgvsp: ENSP00000372361.4:p.His278Ter
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.687_688delTC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-920_1068-919delTC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.801_802delTC
  hgvsp: ENSP00000445779.1:p.His268Ter
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-920_587-919delTC
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1224_1225delTC
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29653
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3431
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His278Ter
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: TGA
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

13-20412882-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412882
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412882
    reference: chr 13
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.830C>G
  hgvsp: ENSP00000337034.4:p.Ser277Cys
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-921C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.830C>G
  hgvsp: ENSP00000372361.4:p.Ser277Cys
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.800C>G
  hgvsp: ENSP00000445779.1:p.Ser267Cys
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1223C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-921C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.686C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-921C>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12553
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser277Cys
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

13-20412884-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412884
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412884
    reference: chr 13
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.828C>G
  hgvsp: ENSP00000337034.4:p.Phe276Leu
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-923C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.828C>G
  hgvsp: ENSP00000372361.4:p.Phe276Leu
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.798C>G
  hgvsp: ENSP00000445779.1:p.Phe266Leu
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-923C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-923C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1221C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.684C>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2020
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4039
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Phe276Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

13-20412895-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412895
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412895
    reference: chr 13
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.817C>T
  hgvsp: ENSP00000372361.4:p.Leu273Phe
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.817C>T
  hgvsp: ENSP00000337034.4:p.Leu273Phe
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.787C>T
  hgvsp: ENSP00000445779.1:p.Leu263Phe
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.673C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1210C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-934C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-934C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-934C>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9037
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3432
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3439
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu273Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

13-20412906-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412906
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412906
    reference: chr 13
allele count: 12
allele frequency: 9.883701775771753e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.806C>G
  hgvsp: ENSP00000337034.4:p.Ser269Cys
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1199C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.776C>G
  hgvsp: ENSP00000445779.1:p.Ser259Cys
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.806C>G
  hgvsp: ENSP00000372361.4:p.Ser269Cys
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-945C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-945C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.662C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-945C>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 3491
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser269Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/13-20412907-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412907
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412907
    reference: chr 13
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.661T>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-946T>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-946T>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.805T>G
  hgvsp: ENSP00000372361.4:p.Ser269Ala
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1198T>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.775T>G
  hgvsp: ENSP00000445779.1:p.Ser259Ala
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.805T>G
  hgvsp: ENSP00000337034.4:p.Ser269Ala
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-946T>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3430
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3491
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser269Ala
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

13-20412917-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412917
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412917
    reference: chr 13
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-956C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.795C>T
  hgvsp: ENST00000337963.4:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.651C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1188C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-956C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.765C>T
  hgvsp: ENST00000502168.2:c.765C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-956C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.795C>T
  hgvsp: ENST00000382905.4:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His265His
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

13-20412919-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412919
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412919
    reference: chr 13
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-958C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-958C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.763C>T
  hgvsp: ENSP00000445779.1:p.His255Tyr
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.793C>T
  hgvsp: ENSP00000337034.4:p.His265Tyr
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1186C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.649C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.793C>T
  hgvsp: ENSP00000372361.4:p.His265Tyr
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-958C>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4036
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3491
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His265Tyr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

13-20412923-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412923
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412923
    reference: chr 13
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.789A>C
  hgvsp: ENST00000382905.4:c.789A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1182A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.759A>C
  hgvsp: ENST00000502168.2:c.759A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-962A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.645A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-962A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-962A>C
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.789A>C
  hgvsp: ENST00000337963.4:c.789A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29656
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser263Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

13-20412933-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412933
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412933
    reference: chr 13
allele count: 3
allele frequency: 2.470925443942938e-5
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.635G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-972G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.749G>A
  hgvsp: ENSP00000445779.1:p.Arg250Gln
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-972G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1172G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.779G>A
  hgvsp: ENSP00000372361.4:p.Arg260Gln
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-972G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.779G>A
  hgvsp: ENSP00000337034.4:p.Arg260Gln
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg260Gln
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

13-20412934-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412934
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412934
    reference: chr 13
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-973C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.778C>T
  hgvsp: ENSP00000337034.4:p.Arg260Ter
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.778C>T
  hgvsp: ENSP00000372361.4:p.Arg260Ter
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-973C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-973C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1171C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.748C>T
  hgvsp: ENSP00000445779.1:p.Arg250Ter
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.634C>T
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29655
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg260Ter
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

13-20412942-GCTGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412942
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412938
    reference: chr 13
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.766_769delACAG
  hgvsp: ENSP00000337034.4:p.Thr256LeufsTer31
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.622_625delACAG
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-985_587-982delACAG
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1159_1162delACAG
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-985_1068-982delACAG
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.736_739delACAG
  hgvsp: ENSP00000445779.1:p.Thr246LeufsTer31
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.766_769delACAG
  hgvsp: ENSP00000372361.4:p.Thr256LeufsTer31
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-985_980-982delACAG
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3430
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr256LeufsTer31
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: GCTGT
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

13-20412945-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412945
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412945
    reference: chr 13
allele count: 1
allele frequency: 8.236418146476461e-6
allele num: 121412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.767C>T
  hgvsp: ENSP00000337034.4:p.Thr256Ile
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-984C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.737C>T
  hgvsp: ENSP00000445779.1:p.Thr246Ile
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-984C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.623C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1160C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-984C>T
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.767C>T
  hgvsp: ENSP00000372361.4:p.Thr256Ile
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr256Ile
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

13-20412950-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412950
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412950
    reference: chr 13
allele count: 2
allele frequency: 1.647283629295292e-5
allele num: 121412
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.762A>G
  hgvsp: ENST00000382905.4:c.762A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-989A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-989A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.618A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1155A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-989A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.762A>G
  hgvsp: ENST00000337963.4:c.762A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.732A>G
  hgvsp: ENST00000502168.2:c.732A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly254Gly
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

13-20412951-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412951
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412951
    reference: chr 13
allele count: 15
allele frequency: 1.235462721971469e-4
allele num: 121412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.761G>A
  hgvsp: ENSP00000337034.4:p.Gly254Glu
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.761G>A
  hgvsp: ENSP00000372361.4:p.Gly254Glu
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-990G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-990G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.617G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1154G>A
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.731G>A
  hgvsp: ENSP00000445779.1:p.Gly244Glu
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-990G>A
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 8898
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12560
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2072
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3427
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly254Glu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

13-20412959-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412959
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412959
    reference: chr 13
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.753A>G
  hgvsp: ENST00000382905.4:c.753A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1146A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.753A>G
  hgvsp: ENST00000337963.4:c.753A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.609A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.723A>G
  hgvsp: ENST00000502168.2:c.723A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-998A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-998A>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-998A>G
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu251Leu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

13-20412963-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412963
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412963
    reference: chr 13
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.719C>G
  hgvsp: ENSP00000445779.1:p.Pro240Arg
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-1002C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.605C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1142C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-1002C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.749C>G
  hgvsp: ENSP00000372361.4:p.Pro250Arg
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-1002C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.749C>G
  hgvsp: ENSP00000337034.4:p.Pro250Arg
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4037
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro250Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

13-20412971-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20412971
    reference: chr 13
  end: Position
    type: ExactPosition
    position: 20412971
    reference: chr 13
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000337034
  ensembl transcript: ENST00000337963
  gene symbol: ZMYM5
  hgvsc: ENST00000337963.4:c.741C>G
  hgvsp: ENSP00000337034.4:p.Cys247Trp
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000445779
  ensembl transcript: ENST00000502168
  gene symbol: ZMYM5
  hgvsc: ENST00000502168.2:c.711C>G
  hgvsp: ENSP00000445779.1:p.Cys237Trp
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000382909
  gene symbol: ZMYM5
  hgvsc: ENST00000382909.1:n.597C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000467542
  gene symbol: ZMYM5
  hgvsc: ENST00000467542.1:n.1134C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000495534
  gene symbol: ZMYM5
  hgvsc: ENST00000495534.1:n.980-1010C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372364
  ensembl transcript: ENST00000382907
  gene symbol: ZMYM5
  hgvsc: ENST00000382907.4:c.587-1010C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132950
  ensembl transcript: ENST00000535942
  gene symbol: ZMYM5
  hgvsc: ENST00000535942.1:n.1068-1010C>G
  variant of: http://identifiers.org/hgnc/13029
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132950
  ensembl protein: ENSP00000372361
  ensembl transcript: ENST00000382905
  gene symbol: ZMYM5
  hgvsc: ENST00000382905.4:c.741C>G
  hgvsp: ENSP00000372361.4:p.Cys247Trp
  variant of: http://identifiers.org/hgnc/13029
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Cys247Trp
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2758
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32484
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9103
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16436
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66508
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.924e1

QD
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SIO_000300: 1.142e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

FS
type: SiteQuality
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BaseQRankSum
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MQRankSum
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SIO_000300: -3.74e-1

VQSLOD
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SIO_000300: 5.51e-1

InbreedingCoeff
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SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.911101e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.730403183941858e-4
allele num: 11558
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66516
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.203e1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQ
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SIO_000300: 5.932e1

DP
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SIO_000300: 1.912312e6

MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503262078710802e-5
allele num: 66522
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
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MQ
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SIO_000300: 5.922e1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -4.03e-1

FS
type: SiteQuality
SIO_000300: 4.18e0

ClippingRankSum
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SIO_000300: -1.542e0

DP
type: SiteQuality
SIO_000300: 1.912656e6

BaseQRankSum
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SIO_000300: 3.84e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503759398496241e-5
allele num: 66500
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

QD
type: SiteQuality
SIO_000300: 1.414e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.65e-1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e0

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.116e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503759398496241e-5
allele num: 66500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: -7.65e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.116e0

FS
type: SiteQuality
SIO_000300: 1.238e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e0

DP
type: SiteQuality
SIO_000300: 1.912345e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504981488727689e-5
allele num: 66446
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQ
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ClippingRankSum
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BaseQRankSum
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DP
type: SiteQuality
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FS
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66418
num of homozygotes: 0

South Asian
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allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
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Other
type: Population
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DP
type: SiteQuality
SIO_000300: 1.910497e6

InbreedingCoeff
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele count: 0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.506886471173262e-5
allele num: 66362
num of homozygotes: 0

Other
type: Population
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ClippingRankSum
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InbreedingCoeff
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DP
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele num: 904
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African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 66
allele frequency: 9.955351755762036e-4
allele num: 66296
num of homozygotes: 0

South Asian
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allele frequency: 1.273808079582676e-2
allele num: 16486
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Latino
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allele frequency: 1.99030806507442e-3
allele num: 11556
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East Asian
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MQ
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
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MQRankSum
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BaseQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 1499
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.509160604871571e-5
allele num: 66262
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.607e0

ClippingRankSum
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SIO_000300: -6.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.908004e6

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66262
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.607e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
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ClippingRankSum
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SIO_000300: -6.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 1.908004e6

QD
type: SiteQuality
SIO_000300: 1.181e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.007049345417925e-4
allele num: 9930
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66262
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.947e1

MQRankSum
type: SiteQuality
SIO_000300: 5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

QD
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SIO_000300: 1.24e1

DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.435e0

FS
type: SiteQuality
SIO_000300: 1.2081e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.472222222222222e-4
allele num: 8640
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.533e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.905232e6

VQSLOD
type: SiteQuality
SIO_000300: 6.919999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.137e1

FS
type: SiteQuality
SIO_000300: 9.389999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511532996765319e-5
allele num: 66158
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.319e0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.909e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

FS
type: SiteQuality
SIO_000300: 9.0e-1

DP
type: SiteQuality
SIO_000300: 1.90393e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.984e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513958699206686e-5
allele num: 66052
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

BaseQRankSum
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SIO_000300: -4.066e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.38e-1

DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.05008235222351e-5
allele num: 65572
num of homozygotes: 0

MQRankSum
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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DP
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MQ
type: SiteQuality
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QD
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BaseQRankSum
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FS
type: SiteQuality
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

African
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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FS
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MQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 11534
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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South Asian
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533083951677194e-5
allele num: 65228
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

QD
type: SiteQuality
SIO_000300: 1.058e1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 7.89e-1

MQRankSum
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SIO_000300: 3.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

MQ
type: SiteQuality
SIO_000300: 6.024e1

DP
type: SiteQuality
SIO_000300: 1.848095e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65228
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.101281269066504e-5
allele num: 16390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.058e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e0

FS
type: SiteQuality
SIO_000300: 7.89e-1

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.024e1

ReadPosRankSum
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SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

DP
type: SiteQuality
SIO_000300: 1.848095e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65032
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.736714136853074e-4
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.88e-1

DP
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SIO_000300: 1.807422e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.332e1

FS
type: SiteQuality
SIO_000300: 9.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64622
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9396
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
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allele frequency: 1.166861143523921e-4
allele num: 8570
num of homozygotes: 0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.522e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.456e0

DP
type: SiteQuality
SIO_000300: 1.767295e6

MQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.78e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.697164724299878e-5
allele num: 11498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9354
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 9.65e0

VQSLOD
type: SiteQuality
SIO_000300: 2.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.268e0

DP
type: SiteQuality
SIO_000300: 1.752993e6

MQ
type: SiteQuality
SIO_000300: 5.906e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.88e-1

FS
type: SiteQuality
SIO_000300: 1.842e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.126700159294204e-5
allele num: 16322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64468
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.103e0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.807e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

ClippingRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

QD
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 1.7524e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

European (Non-Finnish)
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allele count: 131
allele frequency: 2.040943507930078e-3
allele num: 64186
num of homozygotes: 1

African
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allele count: 3
allele frequency: 3.223033949290932e-4
allele num: 9308
num of homozygotes: 0

European (Finnish)
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allele count: 20
allele frequency: 3.041362530413625e-3
allele num: 6576
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.741553465691397e-4
allele num: 11484
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.48e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.727713e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.592255270364945e-5
allele num: 62804
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 3.076e0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.022e1

DP
type: SiteQuality
SIO_000300: 1.681576e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65920
num of homozygotes: 0

African
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allele frequency: 9.854158454867954e-5
allele num: 10148
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15224
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

ClippingRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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DP
type: SiteQuality
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VQSLOD
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MQ
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

FS
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 969
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516990291262136e-5
allele num: 65920
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

FS
type: SiteQuality
SIO_000300: 2.352e0

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.97e-1

DP
type: SiteQuality
SIO_000300: 2.432202e6

QD
type: SiteQuality
SIO_000300: 1.518e1

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516852228255923e-5
allele num: 65926
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.33e0

VQSLOD
type: SiteQuality
SIO_000300: -1.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.684e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.433052e6

MQRankSum
type: SiteQuality
SIO_000300: -9.94e-1

QD
type: SiteQuality
SIO_000300: 1.544e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.141552511415525e-3
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.72e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.57e0

DP
type: SiteQuality
SIO_000300: 2.436116e6

QD
type: SiteQuality
SIO_000300: 1.357e1

GenotypeQuality
all individuals: 100
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1950
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3431
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65952
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.883e1

VQSLOD
type: SiteQuality
SIO_000300: -2.497e0

DP
type: SiteQuality
SIO_000300: 2.439608e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

FS
type: SiteQuality
SIO_000300: 4.715e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.416e0

MQRankSum
type: SiteQuality
SIO_000300: -1.568e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.469e0

QD
type: SiteQuality
SIO_000300: 1.299e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e0

GenotypeQuality
all individuals: 3360
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3443
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 232
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variant carriers: 0

GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 8716
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65968
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15306
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.95217476874631e-4
allele num: 10162
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-2

FS
type: SiteQuality
SIO_000300: 8.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.76e-1

DP
type: SiteQuality
SIO_000300: 2.447707e6

QD
type: SiteQuality
SIO_000300: 1.486e1

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9520
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3447
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3362
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.53765690376569e-5
allele num: 15296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65978
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.196e1

MQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

DP
type: SiteQuality
SIO_000300: 2.455466e6

VQSLOD
type: SiteQuality
SIO_000300: 4.93e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.099e0

GenotypeQuality
all individuals: 3399
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 3468
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variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.25e1
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GenotypeQuality
all individuals: 3837
bin: 6.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
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variant carriers: 0

GenotypeQuality
all individuals: 29583
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51308821304282e-5
allele num: 66090
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.05e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

VQSLOD
type: SiteQuality
SIO_000300: 3.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.467123e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e-1

QD
type: SiteQuality
SIO_000300: 1.267e1

GenotypeQuality
all individuals: 335
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 2005
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variant carriers: 0

GenotypeQuality
all individuals: 108
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3405
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51308821304282e-5
allele num: 66090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15532
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.467123e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.05e0

QD
type: SiteQuality
SIO_000300: 1.267e1

VQSLOD
type: SiteQuality
SIO_000300: 3.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 128
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2040
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508295625942685e-5
allele num: 66300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.442e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

QD
type: SiteQuality
SIO_000300: 2.6e-1

MQ
type: SiteQuality
SIO_000300: 5.604e1

MQRankSum
type: SiteQuality
SIO_000300: -4.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 3.717e0

DP
type: SiteQuality
SIO_000300: 2.481935e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.505e0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 482
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GenotypeQuality
all individuals: 100
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
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GenotypeQuality
all individuals: 2047
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
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GenotypeQuality
all individuals: 29604
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66356
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

FS
type: SiteQuality
SIO_000300: 7.586e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.291e0

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.212e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e-1

DP
type: SiteQuality
SIO_000300: 2.484467e6

GenotypeQuality
all individuals: 3928
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11764
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92492781520693e-4
allele num: 10390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15978
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.484467e6

QD
type: SiteQuality
SIO_000300: 1.212e1

FS
type: SiteQuality
SIO_000300: 7.586e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.291e0

GenotypeQuality
all individuals: 450
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 17

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3933
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.849855630413859e-4
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

East Asian
type: Population
allele count: 13
allele frequency: 1.502890173410405e-3
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16032
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

DP
type: SiteQuality
SIO_000300: 2.486058e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 4.633e0

QD
type: SiteQuality
SIO_000300: 1.331e1

MQ
type: SiteQuality
SIO_000300: 5.938e1

GenotypeQuality
all individuals: 3481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2047
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506477854775535e-5
allele num: 66380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16032
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 4.633e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 2.486058e6

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3943
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3477
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2011
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variant carriers: 0

GenotypeQuality
all individuals: 29655
bin: 9.75e1
variant carriers: 101

GenotypeQuality
all individuals: 3409
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.347286051422183e-4
allele num: 16102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 85
allele frequency: 1.279735019572418e-3
allele num: 66420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.323763403666552e-4
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.886280546469117e-4
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.906e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.003e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

DP
type: SiteQuality
SIO_000300: 2.490651e6

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.38e-2

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

QD
type: SiteQuality
SIO_000300: 1.24e1

GenotypeQuality
all individuals: 222
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2014
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12179
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GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.140243153628883e-5
allele num: 16286
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQRankSum
type: SiteQuality
SIO_000300: -2.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

DP
type: SiteQuality
SIO_000300: 2.495482e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.97e-1

FS
type: SiteQuality
SIO_000300: 5.882e0

QD
type: SiteQuality
SIO_000300: 1.193e1

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2014
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variant carriers: 0

GenotypeQuality
all individuals: 3440
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.097560975609756e-5
allele num: 16400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

VQSLOD
type: SiteQuality
SIO_000300: 3.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.444e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

QD
type: SiteQuality
SIO_000300: 1.617e1

DP
type: SiteQuality
SIO_000300: 2.498555e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.59e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067224851352991e-5
allele num: 16482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.9e-2

DP
type: SiteQuality
SIO_000300: 2.501322e6

FS
type: SiteQuality
SIO_000300: 9.555e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.034e0

QD
type: SiteQuality
SIO_000300: 1.303e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.501627e6

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e0

QD
type: SiteQuality
SIO_000300: 1.426e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.285e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.664e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 2068
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GenotypeQuality
all individuals: 29650
bin: 9.75e1
variant carriers: 14

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.345895020188425e-3
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-1

QD
type: SiteQuality
SIO_000300: 1.876e1

FS
type: SiteQuality
SIO_000300: 6.63e-1

DP
type: SiteQuality
SIO_000300: 2.503128e6

MQRankSum
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SIO_000300: -1.915e0

InbreedingCoeff
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SIO_000300: 3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.63e-1

MQ
type: SiteQuality
SIO_000300: 5.618e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.765904285988853e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66724
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e-1

MQRankSum
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BaseQRankSum
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SIO_000300: -5.063e0

FS
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MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
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SIO_000300: 5.21e0

DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.97e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.749e0

DP
type: SiteQuality
SIO_000300: 2.503778e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.281e0

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

MQRankSum
type: SiteQuality
SIO_000300: 6.57e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.562e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.503778e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.281e0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.749e0

MQRankSum
type: SiteQuality
SIO_000300: 6.57e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.562e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.47e0

QD
type: SiteQuality
SIO_000300: 1.352e1

MQRankSum
type: SiteQuality
SIO_000300: 7.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.83e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.059e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 2.503594e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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DP
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
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MQ
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ReadPosRankSum
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MQRankSum
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VQSLOD
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DP
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FS
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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African
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East Asian
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allele frequency: 2.31107002542177e-4
allele num: 8654
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Latino
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FS
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DP
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QD
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQ
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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East Asian
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South Asian
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African
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MQRankSum
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FS
type: SiteQuality
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MQ
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16512
num of homozygotes: 0

African
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European (Non-Finnish)
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Latino
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European (Finnish)
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East Asian
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VQSLOD
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MQ
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DP
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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FS
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InbreedingCoeff
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MQ
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QD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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East Asian
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South Asian
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European (Non-Finnish)
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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MQRankSum
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DP
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QD
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FS
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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Other
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African
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European (Finnish)
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ReadPosRankSum
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VQSLOD
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FS
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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ClippingRankSum
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QD
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MQRankSum
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MQ
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DP
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FS
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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FS
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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QD
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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African
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East Asian
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MQ
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QD
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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African
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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MQ
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DP
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BaseQRankSum
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VQSLOD
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African
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South Asian
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FS
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.963e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

MQ
type: SiteQuality
SIO_000300: 5.993e1

VQSLOD
type: SiteQuality
SIO_000300: -1.093e0

DP
type: SiteQuality
SIO_000300: 2.504512e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

FS
type: SiteQuality
SIO_000300: 3.362e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

QD
type: SiteQuality
SIO_000300: 1.554e1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12562
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3438
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

MQRankSum
type: SiteQuality
SIO_000300: -3.557e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e-2

MQ
type: SiteQuality
SIO_000300: 5.692e1

QD
type: SiteQuality
SIO_000300: 1.228e1

DP
type: SiteQuality
SIO_000300: 2.504532e6

FS
type: SiteQuality
SIO_000300: 4.743e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.73e-1

GenotypeQuality
all individuals: 2019
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29655
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

QD
type: SiteQuality
SIO_000300: 1.321e1

VQSLOD
type: SiteQuality
SIO_000300: 8.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 2.504659e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.293e0

FS
type: SiteQuality
SIO_000300: 4.069e0

MQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.61e-1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2018
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4035
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12560
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29657
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2074
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.72e0

MQRankSum
type: SiteQuality
SIO_000300: 1.97e0

VQSLOD
type: SiteQuality
SIO_000300: -8.586e-1

DP
type: SiteQuality
SIO_000300: 2.504513e6

FS
type: SiteQuality
SIO_000300: 8.327e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.413e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4035
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29663
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 2017
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 3490
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.295560545862843e-3
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-1

FS
type: SiteQuality
SIO_000300: 5.51e-1

DP
type: SiteQuality
SIO_000300: 2.506655e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.222e0

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.135e1

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

GenotypeQuality
all individuals: 3437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4036
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3428
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 12563
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29656
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3492
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.09e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.387e0

VQSLOD
type: SiteQuality
SIO_000300: 8.4e-1

DP
type: SiteQuality
SIO_000300: 2.504741e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.32e-1

QD
type: SiteQuality
SIO_000300: 1.423e1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

GenotypeQuality
all individuals: 3437
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 12564
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variant carriers: 0

GenotypeQuality
all individuals: 2073
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variant carriers: 0

GenotypeQuality
all individuals: 29654
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.242e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.112e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.942e0

DP
type: SiteQuality
SIO_000300: 2.504574e6

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 1.231e1

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.774e-1