14-94935822-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935822
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935822
    reference: chr 14
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+140A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.302A>G
  hgvsp: ENSP00000445476.1:p.His101Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.116A>G
  hgvsp: ENSP00000414092.2:p.His39Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.356A>G
  hgvsp: ENSP00000369723.3:p.His119Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.410A>G
  hgvsp: ENSP00000337133.5:p.His137Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-19A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.492A>G
  hgvsp: ENST00000538527.1:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22912
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His137Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum

14-94935830-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935830
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935830
    reference: chr 14
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.348C>T
  hgvsp: ENST00000380365.3:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+132C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-27C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.402C>T
  hgvsp: ENST00000337425.5:c.402C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.484C>T
  hgvsp: ENSP00000441511.1:p.Pro162Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.108C>T
  hgvsp: ENST00000448305.2:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.294C>T
  hgvsp: ENST00000546329.1:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3688
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro162Ser
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-94935833-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935833
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935833
    reference: chr 14
allele count: 2
allele frequency: 1.656012983141788e-5
allele num: 120772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.345G>A
  hgvsp: ENST00000380365.3:c.345G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+129G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.481G>A
  hgvsp: ENSP00000441511.1:p.Ala161Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.105G>A
  hgvsp: ENST00000448305.2:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.291G>A
  hgvsp: ENST00000546329.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-30G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.399G>A
  hgvsp: ENST00000337425.5:c.399G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3687
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala161Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

14-94935836-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935836
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935836
    reference: chr 14
allele count: 2
allele frequency: 1.656012983141788e-5
allele num: 120772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.478C>T
  hgvsp: ENSP00000441511.1:p.Pro160Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.396C>T
  hgvsp: ENST00000337425.5:c.396C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+126C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.102C>T
  hgvsp: ENST00000448305.2:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.288C>T
  hgvsp: ENST00000546329.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.342C>T
  hgvsp: ENST00000380365.3:c.342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-33C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20368
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6353
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22917
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro160Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

14-94935843-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935843
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935843
    reference: chr 14
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.471A>G
  hgvsp: ENST00000538527.1:c.471A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.281A>G
  hgvsp: ENSP00000445476.1:p.Gln94Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.95A>G
  hgvsp: ENSP00000414092.2:p.Gln32Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+119A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.389A>G
  hgvsp: ENSP00000337133.5:p.Gln130Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-40A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.335A>G
  hgvsp: ENSP00000369723.3:p.Gln112Arg
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2986
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln130Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

14-94935844-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935844
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935844
    reference: chr 14
allele count: 1
allele frequency: 8.280064915708939e-6
allele num: 120772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.280C>A
  hgvsp: ENSP00000445476.1:p.Gln94Lys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-41C>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.388C>A
  hgvsp: ENSP00000337133.5:p.Gln130Lys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.94C>A
  hgvsp: ENSP00000414092.2:p.Gln32Lys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.470C>A
  hgvsp: ENSP00000441511.1:p.Pro157Gln
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+118C>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.334C>A
  hgvsp: ENSP00000369723.3:p.Gln112Lys
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2986
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18298
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln130Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

14-94935845-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935845
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935845
    reference: chr 14
allele count: 35
allele frequency: 2.898070712925395e-4
allele num: 120770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-42C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.93C>T
  hgvsp: ENST00000448305.2:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.333C>T
  hgvsp: ENST00000380365.3:c.333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.387C>T
  hgvsp: ENST00000337425.5:c.387C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.279C>T
  hgvsp: ENST00000546329.1:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+117C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.469C>T
  hgvsp: ENSP00000441511.1:p.Pro157Ser
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3682
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2985
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro157Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ

14-94935846-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935846
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935846
    reference: chr 14
allele count: 8
allele frequency: 6.624161629543761e-5
allele num: 120770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-43A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+116A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.92A>G
  hgvsp: ENSP00000414092.2:p.His31Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.332A>G
  hgvsp: ENSP00000369723.3:p.His111Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.386A>G
  hgvsp: ENSP00000337133.5:p.His129Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.278A>G
  hgvsp: ENSP00000445476.1:p.His93Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.468A>G
  hgvsp: ENST00000538527.1:c.468A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6355
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2986
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His129Arg
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-94935852-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935852
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935852
    reference: chr 14
allele count: 6
allele frequency: 4.968038949425363e-5
allele num: 120772
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.380C>T
  hgvsp: ENSP00000337133.5:p.Ala127Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.86C>T
  hgvsp: ENSP00000414092.2:p.Ala29Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.326C>T
  hgvsp: ENSP00000369723.3:p.Ala109Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.272C>T
  hgvsp: ENSP00000445476.1:p.Ala91Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+110C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.462C>T
  hgvsp: ENST00000538527.1:c.462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-49C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6358
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala127Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

14-94935870-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935870
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935870
    reference: chr 14
allele count: 6
allele frequency: 4.968038949425363e-5
allele num: 120772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.68C>T
  hgvsp: ENSP00000414092.2:p.Thr23Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.362C>T
  hgvsp: ENSP00000337133.5:p.Thr121Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.308C>T
  hgvsp: ENSP00000369723.3:p.Thr103Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.254C>T
  hgvsp: ENSP00000445476.1:p.Thr85Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+92C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.444C>T
  hgvsp: ENST00000538527.1:c.444C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-67C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2987
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2641
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr121Ile
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

14-94935886-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935886
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935886
    reference: chr 14
allele count: 2
allele frequency: 1.656012983141788e-5
allele num: 120772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.428C>T
  hgvsp: ENSP00000441511.1:p.Pro143Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+76C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.292C>T
  hgvsp: ENST00000380365.3:c.292C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.52C>T
  hgvsp: ENST00000448305.2:c.52C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.238C>T
  hgvsp: ENST00000546329.1:c.238C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-83C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.346C>T
  hgvsp: ENST00000337425.5:c.346C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11510
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18315
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6361
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro143Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

14-94935889-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935889
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935889
    reference: chr 14
allele count: 1
allele frequency: 8.280064915708939e-6
allele num: 120772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.425G>A
  hgvsp: ENSP00000441511.1:p.Gly142Glu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.289G>A
  hgvsp: ENSP00000369723.3:p.Gly97Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-86G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.235G>A
  hgvsp: ENSP00000445476.1:p.Gly79Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.49G>A
  hgvsp: ENSP00000414092.2:p.Gly17Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.343G>A
  hgvsp: ENSP00000337133.5:p.Gly115Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+73G>A
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3693
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6360
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly115Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS

14-94935900-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935900
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935900
    reference: chr 14
allele count: 2
allele frequency: 1.65604040738594e-5
allele num: 120770
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.38A>C
  hgvsp: ENSP00000414092.2:p.Gln13Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.332A>C
  hgvsp: ENSP00000337133.5:p.Gln111Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-97A>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+62A>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.278A>C
  hgvsp: ENSP00000369723.3:p.Gln93Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.224A>C
  hgvsp: ENSP00000445476.1:p.Gln75Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.414A>C
  hgvsp: ENST00000538527.1:c.414A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22864
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln111Pro
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

14-94935901-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935901
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935901
    reference: chr 14
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.331C>T
  hgvsp: ENSP00000337133.5:p.Gln111Ter
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.37C>T
  hgvsp: ENSP00000414092.2:p.Gln13Ter
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.277C>T
  hgvsp: ENSP00000369723.3:p.Gln93Ter
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.223C>T
  hgvsp: ENSP00000445476.1:p.Gln75Ter
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-98C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+61C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.413C>T
  hgvsp: ENSP00000441511.1:p.Pro138Leu
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14795
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln111Ter
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

14-94935901-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935901
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935901
    reference: chr 14
allele count: 25031
allele frequency: 2.073235376944357e-1
allele num: 120734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.223C>G
  hgvsp: ENSP00000445476.1:p.Gln75Glu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.413C>G
  hgvsp: ENSP00000441511.1:p.Pro138Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.331C>G
  hgvsp: ENSP00000337133.5:p.Gln111Glu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.37C>G
  hgvsp: ENSP00000414092.2:p.Gln13Glu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-98C>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.277C>G
  hgvsp: ENSP00000369723.3:p.Gln93Glu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+61C>G
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 7.75e1
  variant carriers: 1071
genotype depth: GenotypeDepth
  all individuals: 1810
  bin: 4.25e1
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 12102
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.25e1
  variant carriers: 317
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 2.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 7.25e1
  variant carriers: 862
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 6.25e1
  variant carriers: 570
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 6.75e1
  variant carriers: 676
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 3.75e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 5.75e1
  variant carriers: 437
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 8.75e1
  variant carriers: 1456
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14795
  bin: 9.75e1
  variant carriers: 13566
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 8.25e1
  variant carriers: 1233
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 3.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 9.25e1
  variant carriers: 1457
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15307
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 33181
  bin: 9.75e1
  variant carriers: 22161
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 5
hgvs: p.Gln111Glu
num of homozygotes: 2836
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

14-94935902-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935902
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935902
    reference: chr 14
allele count: 2
allele frequency: 1.656012983141788e-5
allele num: 120772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.222C>T
  hgvsp: ENST00000546329.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.412C>T
  hgvsp: ENSP00000441511.1:p.Pro138Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.276C>T
  hgvsp: ENST00000380365.3:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.36C>T
  hgvsp: ENST00000448305.2:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-99C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+60C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.330C>T
  hgvsp: ENST00000337425.5:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12933
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20418
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Pro138Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

14-94935905-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935905
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935905
    reference: chr 14
allele count: 2
allele frequency: 1.65604040738594e-5
allele num: 120770
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-102G>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.327G>C
  hgvsp: ENSP00000337133.5:p.Lys109Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.219G>C
  hgvsp: ENSP00000445476.1:p.Lys73Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.33G>C
  hgvsp: ENSP00000414092.2:p.Lys11Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.409G>C
  hgvsp: ENSP00000441511.1:p.Asp137His
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+57G>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.273G>C
  hgvsp: ENSP00000369723.3:p.Lys91Asn
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1921
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21073
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20416
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6036
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys109Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

14-94935913-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935913
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935913
    reference: chr 14
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.211G>A
  hgvsp: ENSP00000445476.1:p.Val71Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.319G>A
  hgvsp: ENSP00000337133.5:p.Val107Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.265G>A
  hgvsp: ENSP00000369723.3:p.Val89Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.25G>A
  hgvsp: ENSP00000414092.2:p.Val9Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+49G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.401G>A
  hgvsp: ENSP00000441511.1:p.Ser134Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-110G>A
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12096
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6036
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21075
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2519
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val107Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum

14-94935914-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935914
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935914
    reference: chr 14
allele count: 1
allele frequency: 8.280064915708939e-6
allele num: 120772
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.400A>C
  hgvsp: ENSP00000441511.1:p.Ser134Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.318A>C
  hgvsp: ENST00000337425.5:c.318A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.264A>C
  hgvsp: ENST00000380365.3:c.264A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.24A>C
  hgvsp: ENST00000448305.2:c.24A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.210A>C
  hgvsp: ENST00000546329.1:c.210A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-111A>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+48A>C
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3544
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser134Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

14-94935915-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935915
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935915
    reference: chr 14
allele count: 2
allele frequency: 1.656012983141788e-5
allele num: 120772
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.317C>T
  hgvsp: ENSP00000337133.5:p.Ser106Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-112C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+47C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.23C>T
  hgvsp: ENSP00000414092.2:p.Ser8Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.399C>T
  hgvsp: ENST00000538527.1:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.263C>T
  hgvsp: ENSP00000369723.3:p.Ser88Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.209C>T
  hgvsp: ENSP00000445476.1:p.Ser70Leu
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20414
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21079
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser106Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

14-94935916-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935916
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935916
    reference: chr 14
allele count: 5
allele frequency: 4.140238146498186e-5
allele num: 120766
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.398T>C
  hgvsp: ENSP00000441511.1:p.Leu133Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.208T>C
  hgvsp: ENSP00000445476.1:p.Ser70Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.316T>C
  hgvsp: ENSP00000337133.5:p.Ser106Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-113T>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+46T>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.22T>C
  hgvsp: ENSP00000414092.2:p.Ser8Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.262T>C
  hgvsp: ENSP00000369723.3:p.Ser88Pro
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser106Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum

14-94935918-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935918
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935918
    reference: chr 14
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-115A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.314A>G
  hgvsp: ENSP00000337133.5:p.His105Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.396A>G
  hgvsp: ENST00000538527.1:c.396A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.20A>G
  hgvsp: ENSP00000414092.2:p.His7Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.260A>G
  hgvsp: ENSP00000369723.3:p.His87Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+44A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.206A>G
  hgvsp: ENSP00000445476.1:p.His69Arg
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12934
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20411
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2520
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His105Arg
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

14-94935919-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935919
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935919
    reference: chr 14
allele count: 1
allele frequency: 8.280339162692104e-6
allele num: 120768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.259C>T
  hgvsp: ENSP00000369723.3:p.His87Tyr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.395C>T
  hgvsp: ENSP00000441511.1:p.Pro132Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+43C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-116C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.19C>T
  hgvsp: ENSP00000414092.2:p.His7Tyr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.205C>T
  hgvsp: ENSP00000445476.1:p.His69Tyr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.313C>T
  hgvsp: ENSP00000337133.5:p.His105Tyr
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3544
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2519
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21071
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His105Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

14-94935926-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935926
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935926
    reference: chr 14
allele count: 1
allele frequency: 8.280476292996373e-6
allele num: 120766
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.198T>C
  hgvsp: ENST00000546329.1:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.306T>C
  hgvsp: ENST00000337425.5:c.306T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-123T>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+36T>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.12T>C
  hgvsp: ENST00000448305.2:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.388T>C
  hgvsp: ENSP00000441511.1:p.Trp130Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.252T>C
  hgvsp: ENST00000380365.3:c.252T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6038
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2517
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Trp130Arg
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

14-94935927-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935927
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935928
    reference: chr 14
allele count: 6
allele frequency: 4.968203497615263e-5
allele num: 120768
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.386dupC
  hgvsp: ENSP00000441511.1:p.Trp130LeufsTer38
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.196dupC
  hgvsp: ENSP00000445476.1:p.Leu66ProfsTer74
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.10dupC
  hgvsp: ENSP00000414092.2:p.Leu4ProfsTer74
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-125dupC
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.250dupC
  hgvsp: ENSP00000369723.3:p.Leu84ProfsTer74
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+34dupC
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.304dupC
  hgvsp: ENSP00000337133.5:p.Leu102ProfsTer74
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3544
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20408
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 6039
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu102ProfsTer74
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

14-94935928-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935928
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935928
    reference: chr 14
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.386C>G
  hgvsp: ENSP00000441511.1:p.Pro129Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.10C>G
  hgvsp: ENSP00000414092.2:p.Leu4Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.304C>G
  hgvsp: ENSP00000337133.5:p.Leu102Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+34C>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.250C>G
  hgvsp: ENSP00000369723.3:p.Leu84Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.196C>G
  hgvsp: ENSP00000445476.1:p.Leu66Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-125C>G
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3543
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21078
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu102Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-94935934-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935934
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935935
    reference: chr 14
allele count: 1
allele frequency: 8.280202036929701e-6
allele num: 120770
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+27dupG
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-132dupG
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.189dupG
  hgvsp: ENSP00000445476.1:p.Leu64AlafsTer76
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.297dupG
  hgvsp: ENSP00000337133.5:p.Leu100AlafsTer76
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.3dupG
  hgvsp: ENSP00000414092.2:p.Leu2AlafsTer76
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.379dupG
  hgvsp: ENSP00000441511.1:p.Ala127GlyfsTer41
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.243dupG
  hgvsp: ENSP00000369723.3:p.Leu82AlafsTer76
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12921
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2269
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2991
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3546
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu100AlafsTer76
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

14-94935940-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935940
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935940
    reference: chr 14
allele count: 1
allele frequency: 8.280476292996373e-6
allele num: 120766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.292G>A
  hgvsp: ENSP00000337133.5:p.Ala98Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.374G>A
  hgvsp: ENSP00000441511.1:p.Gly125Asp
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-137G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.238G>A
  hgvsp: ENSP00000369723.3:p.Ala80Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+22G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.184G>A
  hgvsp: ENSP00000445476.1:p.Ala62Thr
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2519
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2986
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala98Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-94935943-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935943
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935943
    reference: chr 14
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.371C>T
  hgvsp: ENSP00000441511.1:p.Pro124Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.289C>T
  hgvsp: ENST00000337425.5:c.289C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-6C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.235C>T
  hgvsp: ENST00000380365.3:c.235C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-140C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.181C>T
  hgvsp: ENST00000546329.1:c.181C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+19C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21093
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3542
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro124Leu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

14-94935944-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935944
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935944
    reference: chr 14
allele count: 2
allele frequency: 1.656012983141788e-5
allele num: 120772
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.288C>T
  hgvsp: ENST00000337425.5:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.234C>T
  hgvsp: ENST00000380365.3:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-7C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.370C>T
  hgvsp: ENSP00000441511.1:p.Pro124Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-141C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.180C>T
  hgvsp: ENST00000546329.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+18C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12930
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6037
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20396
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro124Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

14-94935949-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935949
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935949
    reference: chr 14
allele count: 1
allele frequency: 8.280339162692104e-6
allele num: 120768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.365A>T
  hgvsp: ENSP00000441511.1:p.His122Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+13A>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-12A>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-146A>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.229A>T
  hgvsp: ENSP00000369723.3:p.Thr77Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.175A>T
  hgvsp: ENSP00000445476.1:p.Thr59Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.283A>T
  hgvsp: ENSP00000337133.5:p.Thr95Ser
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21089
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2269
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr95Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

14-94935949-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935949
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935949
    reference: chr 14
allele count: 2
allele frequency: 1.656067832538421e-5
allele num: 120768
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.229A>C
  hgvsp: ENSP00000369723.3:p.Thr77Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.365A>C
  hgvsp: ENSP00000441511.1:p.His122Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.175A>C
  hgvsp: ENSP00000445476.1:p.Thr59Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-146A>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.283A>C
  hgvsp: ENSP00000337133.5:p.Thr95Pro
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+13A>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-12A>C
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2269
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6036
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr95Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

14-94935955-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935955
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935955
    reference: chr 14
allele count: 7
allele frequency: 5.796621397813846e-5
allele num: 120760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-18G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-152G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.169G>A
  hgvsp: ENSP00000445476.1:p.Val57Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270+7G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.277G>A
  hgvsp: ENSP00000337133.5:p.Val93Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.223G>A
  hgvsp: ENSP00000369723.3:p.Val75Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.359G>A
  hgvsp: ENSP00000441511.1:p.Cys120Tyr
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2984
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21087
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val93Ile
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP

14-94935962-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935962
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935962
    reference: chr 14
allele count: 3
allele frequency: 2.484348603796085e-5
allele num: 120756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.216T>C
  hgvsp: ENST00000380365.3:c.216T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.270T>C
  hgvsp: ENST00000298845.7:c.270T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.352T>C
  hgvsp: ENSP00000441511.1:p.Cys118Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-25T>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.270T>C
  hgvsp: ENST00000337425.5:c.270T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.162T>C
  hgvsp: ENST00000546329.1:c.162T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-159T>C
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2516
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21084
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6027
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys118Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ

14-94935966-GAGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935966
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935963
    reference: chr 14
allele count: 42
allele frequency: 3.477972838688307e-4
allele num: 120760
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.263_265delTCT
  hgvsp: ENSP00000298845.7:p.Phe88del
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.209_211delTCT
  hgvsp: ENSP00000369723.3:p.Phe70del
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-32_-30delTCT
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-166_-19-164delTCT
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.155_157delTCT
  hgvsp: ENSP00000445476.1:p.Phe52del
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.263_265delTCT
  hgvsp: ENSP00000337133.5:p.Phe88del
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.345_347delTCT
  hgvsp: ENSP00000441511.1:p.Leu116del
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3589
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6030
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Phe88del
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: GAGA
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

14-94935971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935971
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935971
    reference: chr 14
allele count: 2
allele frequency: 1.656259834042764e-5
allele num: 120754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.261C>T
  hgvsp: ENST00000298845.7:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.207C>T
  hgvsp: ENST00000380365.3:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-168C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.261C>T
  hgvsp: ENST00000337425.5:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-34C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.343C>T
  hgvsp: ENSP00000441511.1:p.Leu115Phe
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.153C>T
  hgvsp: ENST00000546329.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6034
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu115Phe
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

14-94935972-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935972
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935972
    reference: chr 14
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.260T>A
  hgvsp: ENSP00000298845.7:p.Phe87Tyr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.342T>A
  hgvsp: ENST00000538527.1:c.342T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-169T>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.260T>A
  hgvsp: ENSP00000337133.5:p.Phe87Tyr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.152T>A
  hgvsp: ENSP00000445476.1:p.Phe51Tyr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-35T>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.206T>A
  hgvsp: ENSP00000369723.3:p.Phe69Tyr
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3533
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21064
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2510
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Phe87Tyr
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

14-94935973-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935973
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935973
    reference: chr 14
allele count: 3
allele frequency: 2.484718978283556e-5
allele num: 120738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-36T>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.259T>A
  hgvsp: ENSP00000298845.7:p.Phe87Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.151T>A
  hgvsp: ENSP00000445476.1:p.Phe51Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.259T>A
  hgvsp: ENSP00000337133.5:p.Phe87Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.205T>A
  hgvsp: ENSP00000369723.3:p.Phe69Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.341T>A
  hgvsp: ENSP00000441511.1:p.Leu114His
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-170T>A
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9040
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3535
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2984
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe87Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

14-94935974-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935974
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935974
    reference: chr 14
allele count: 2
allele frequency: 1.656451880072884e-5
allele num: 120740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-37C>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.340C>A
  hgvsp: ENSP00000441511.1:p.Leu114Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.258C>A
  hgvsp: ENST00000298845.7:c.258C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-171C>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.150C>A
  hgvsp: ENST00000546329.1:c.150C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.258C>A
  hgvsp: ENST00000337425.5:c.258C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.204C>A
  hgvsp: ENST00000380365.3:c.204C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20390
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2515
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2982
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu114Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD

14-94935976-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935976
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935976
    reference: chr 14
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.202A>G
  hgvsp: ENSP00000369723.3:p.Ile68Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.256A>G
  hgvsp: ENSP00000298845.7:p.Ile86Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.338A>G
  hgvsp: ENSP00000441511.1:p.His113Arg
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-173A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.256A>G
  hgvsp: ENSP00000337133.5:p.Ile86Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.148A>G
  hgvsp: ENSP00000445476.1:p.Ile50Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-39A>G
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3532
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile86Val
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

14-94935984-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935984
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935984
    reference: chr 14
allele count: 3
allele frequency: 2.485954357877989e-5
allele num: 120678
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-47G>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.248G>C
  hgvsp: ENSP00000337133.5:p.Ser83Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.194G>C
  hgvsp: ENSP00000369723.3:p.Ser65Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.140G>C
  hgvsp: ENSP00000445476.1:p.Ser47Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.330G>C
  hgvsp: ENSP00000441511.1:p.Glu110Asp
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.248G>C
  hgvsp: ENSP00000298845.7:p.Ser83Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-181G>C
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5996
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2506
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser83Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

14-94935984-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935984
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935984
    reference: chr 14
allele count: 3
allele frequency: 2.485954357877989e-5
allele num: 120678
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-47G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.248G>A
  hgvsp: ENSP00000337133.5:p.Ser83Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.330G>A
  hgvsp: ENST00000538527.1:c.330G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.248G>A
  hgvsp: ENSP00000298845.7:p.Ser83Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.194G>A
  hgvsp: ENSP00000369723.3:p.Ser65Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.140G>A
  hgvsp: ENSP00000445476.1:p.Ser47Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-181G>A
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3590
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20389
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3522
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser83Asn
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS

14-94935985-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935985
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935985
    reference: chr 14
allele count: 3041
allele frequency: 2.519929067435655e-2
allele num: 120678
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.193A>G
  hgvsp: ENSP00000369723.3:p.Ser65Gly
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.247A>G
  hgvsp: ENSP00000298845.7:p.Ser83Gly
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.329A>G
  hgvsp: ENSP00000441511.1:p.Glu110Gly
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.247A>G
  hgvsp: ENSP00000337133.5:p.Ser83Gly
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-182A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-48A>G
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.139A>G
  hgvsp: ENSP00000445476.1:p.Ser47Gly
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 9.75e1
  variant carriers: 542
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 3.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 5.25e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 4.25e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 8792
  bin: 3.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 12148
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 11761
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 7.25e1
  variant carriers: 249
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 6.75e1
  variant carriers: 234
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 7.75e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 6.25e1
  variant carriers: 253
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 4.75e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.25e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 8.25e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 5.75e1
  variant carriers: 217
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 8.75e1
  variant carriers: 134
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2414
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2868
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 21757
  bin: 9.75e1
  variant carriers: 2637
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 5
hgvs: p.Ser83Gly
num of homozygotes: 390
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS

14-94935986-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935986
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935986
    reference: chr 14
allele count: 26
allele frequency: 2.154779466609206e-4
allele num: 120662
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-183G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.246G>A
  hgvsp: ENST00000298845.7:c.246G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.246G>A
  hgvsp: ENST00000337425.5:c.246G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.138G>A
  hgvsp: ENST00000546329.1:c.138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.328G>A
  hgvsp: ENSP00000441511.1:p.Glu110Lys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-49G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.192G>A
  hgvsp: ENST00000380365.3:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21092
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2534
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu110Lys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

14-94935987-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935987
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935987
    reference: chr 14
allele count: 7
allele frequency: 5.802194887437419e-5
allele num: 120644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-184C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.245C>T
  hgvsp: ENSP00000298845.7:p.Pro82Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-50C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.137C>T
  hgvsp: ENSP00000445476.1:p.Pro46Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.327C>T
  hgvsp: ENST00000538527.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.191C>T
  hgvsp: ENSP00000369723.3:p.Pro64Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.245C>T
  hgvsp: ENSP00000337133.5:p.Pro82Leu
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19986
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3572
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2537
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6086
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro82Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

14-94935991-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94935991
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94935991
    reference: chr 14
allele count: 2
allele frequency: 1.65809981760902e-5
allele num: 120620
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.241A>T
  hgvsp: ENSP00000298845.7:p.Thr81Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-188A>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.187A>T
  hgvsp: ENSP00000369723.3:p.Thr63Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.241A>T
  hgvsp: ENSP00000337133.5:p.Thr81Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.133A>T
  hgvsp: ENSP00000445476.1:p.Thr45Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.323A>T
  hgvsp: ENSP00000441511.1:p.Asp108Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-54A>T
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3573
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr81Ser
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

14-94936007-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936007
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936007
    reference: chr 14
allele count: 1
allele frequency: 8.350172848577966e-6
allele num: 119758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.307C>T
  hgvsp: ENSP00000441511.1:p.Gln103Ter
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-3C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-204C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.225C>T
  hgvsp: ENST00000298845.7:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-3C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.225C>T
  hgvsp: ENST00000337425.5:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.171C>T
  hgvsp: ENST00000380365.3:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5838
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20168
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln103Ter
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

14-94936008-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936008
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936008
    reference: chr 14
allele count: 11
allele frequency: 9.187798603454613e-5
allele num: 119724
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-4G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.170G>A
  hgvsp: ENSP00000369723.3:p.Arg57His
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.224G>A
  hgvsp: ENSP00000337133.5:p.Arg75His
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-4G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-205G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.224G>A
  hgvsp: ENSP00000298845.7:p.Arg75His
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.306G>A
  hgvsp: ENST00000538527.1:c.306G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5043
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11773
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12153
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19963
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20187
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2290
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg75His
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

14-94936009-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936009
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936009
    reference: chr 14
allele count: 3
allele frequency: 2.505595830688538e-5
allele num: 119732
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-5C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-5C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.169C>T
  hgvsp: ENSP00000369723.3:p.Arg57Cys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.223C>T
  hgvsp: ENSP00000298845.7:p.Arg75Cys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.305C>T
  hgvsp: ENSP00000441511.1:p.Pro102Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.223C>T
  hgvsp: ENSP00000337133.5:p.Arg75Cys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-206C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20281
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3533
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg75Cys
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

14-94936017-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936017
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936017
    reference: chr 14
allele count: 9
allele frequency: 7.555152614082804e-5
allele num: 119124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-13G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-13G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-214G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.161G>A
  hgvsp: ENSP00000369723.3:p.Arg54His
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.215G>A
  hgvsp: ENSP00000298845.7:p.Arg72His
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.215G>A
  hgvsp: ENSP00000337133.5:p.Arg72His
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.297G>A
  hgvsp: ENST00000538527.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5018
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3517
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg72His
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

14-94936018-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936018
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936018
    reference: chr 14
allele count: 6
allele frequency: 5.044899606497831e-5
allele num: 118932
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.214C>T
  hgvsp: ENSP00000337133.5:p.Arg72Cys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-14C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-215C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.214C>T
  hgvsp: ENSP00000298845.7:p.Arg72Cys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.160C>T
  hgvsp: ENSP00000369723.3:p.Arg54Cys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.296C>T
  hgvsp: ENSP00000441511.1:p.Pro99Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-14C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5012
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19493
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg72Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

14-94936023-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936023
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936023
    reference: chr 14
allele count: 2
allele frequency: 1.689645850229792e-5
allele num: 118368
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.209C>T
  hgvsp: ENSP00000337133.5:p.Ala70Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-220C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-19C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.155C>T
  hgvsp: ENSP00000369723.3:p.Ala52Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-19C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.209C>T
  hgvsp: ENSP00000298845.7:p.Ala70Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.291C>T
  hgvsp: ENST00000538527.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18824
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala70Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

14-94936024-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936024
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936024
    reference: chr 14
allele count: 3
allele frequency: 2.538844318066416e-5
allele num: 118164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.154G>A
  hgvsp: ENSP00000369723.3:p.Ala52Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.208G>A
  hgvsp: ENSP00000337133.5:p.Ala70Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-221G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.290G>A
  hgvsp: ENSP00000441511.1:p.Cys97Tyr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.208G>A
  hgvsp: ENSP00000298845.7:p.Ala70Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-20G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-20G>A
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19950
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala70Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

14-94936030-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936030
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936030
    reference: chr 14
allele count: 5
allele frequency: 4.258363425768209e-5
allele num: 117416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.202G>A
  hgvsp: ENSP00000298845.7:p.Asp68Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-227G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-26G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.202G>A
  hgvsp: ENSP00000337133.5:p.Asp68Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-26G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.284G>A
  hgvsp: ENSP00000441511.1:p.Arg95Gln
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.148G>A
  hgvsp: ENSP00000369723.3:p.Asp50Asn
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11038
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp68Asn
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

14-94936031-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936031
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936031
    reference: chr 14
allele count: 3
allele frequency: 2.559115569659126e-5
allele num: 117228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.147C>T
  hgvsp: ENST00000380365.3:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-27C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.283C>T
  hgvsp: ENSP00000441511.1:p.Arg95Ter
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-27C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-228C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.201C>T
  hgvsp: ENST00000298845.7:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.201C>T
  hgvsp: ENST00000337425.5:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10946
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3179
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2410
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg95Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

14-94936031-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936031
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936031
    reference: chr 14
allele count: 1
allele frequency: 8.530385232197085e-6
allele num: 117228
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-27C>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.201C>A
  hgvsp: ENST00000298845.7:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-27C>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.201C>A
  hgvsp: ENST00000337425.5:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.147C>A
  hgvsp: ENST00000380365.3:c.147C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-228C>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.283C>A
  hgvsp: ENST00000538527.1:c.283C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3179
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2410
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr67Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

14-94936032-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936032
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936032
    reference: chr 14
allele count: 1
allele frequency: 8.531404098486529e-6
allele num: 117214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.146C>T
  hgvsp: ENSP00000369723.3:p.Thr49Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.200C>T
  hgvsp: ENSP00000337133.5:p.Thr67Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-28C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.282C>T
  hgvsp: ENST00000538527.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.200C>T
  hgvsp: ENSP00000298845.7:p.Thr67Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-229C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-28C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2411
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5615
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr67Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

14-94936034-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936034
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936034
    reference: chr 14
allele count: 1
allele frequency: 8.544379507160189e-6
allele num: 117036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.144C>T
  hgvsp: ENST00000380365.3:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.198C>T
  hgvsp: ENST00000298845.7:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-231C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.280C>T
  hgvsp: ENSP00000441511.1:p.His94Tyr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.198C>T
  hgvsp: ENST00000337425.5:c.198C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-30C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-30C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19950
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His94Tyr
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

14-94936040-G-GGAAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936040
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936044
    reference: chr 14
allele count: 1
allele frequency: 8.58251227299255e-6
allele num: 116516
alternate allele: GGAAT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.134_137dupATTC
  hgvsp: ENSP00000369723.3:p.Leu47PhefsTer112
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-40_120-37dupATTC
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.270_273dupATTC
  hgvsp: ENSP00000441511.1:p.Pro92IlefsTer29
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.188_191dupATTC
  hgvsp: ENSP00000298845.7:p.Leu65PhefsTer50
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.188_191dupATTC
  hgvsp: ENSP00000337133.5:p.Leu65PhefsTer112
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-241_-19-238dupATTC
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-40_-67-37dupATTC
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5594
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3578
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu65PhefsTer112
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

14-94936041-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936041
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936041
    reference: chr 14
allele count: 5
allele frequency: 4.301741344896414e-5
allele num: 116232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-37C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.137C>T
  hgvsp: ENSP00000369723.3:p.Ser46Phe
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-37C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.273C>T
  hgvsp: ENST00000538527.1:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.191C>T
  hgvsp: ENSP00000337133.5:p.Ser64Phe
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.191C>T
  hgvsp: ENSP00000298845.7:p.Ser64Phe
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-238C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4996
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2965
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser64Phe
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD

14-94936048-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936048
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936048
    reference: chr 14
allele count: 3
allele frequency: 2.601366584579099e-5
allele num: 115324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-245G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-44G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.184G>A
  hgvsp: ENSP00000298845.7:p.Val62Met
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.266G>A
  hgvsp: ENSP00000441511.1:p.Gly89Asp
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.184G>A
  hgvsp: ENSP00000337133.5:p.Val62Met
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.130G>A
  hgvsp: ENSP00000369723.3:p.Val44Met
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-44G>A
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5001
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16938
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2402
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val62Met
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ

14-94936055-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936055
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936055
    reference: chr 14
allele count: 3
allele frequency: 2.624534145189229e-5
allele num: 114306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.177C>T
  hgvsp: ENST00000298845.7:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.259C>T
  hgvsp: ENSP00000441511.1:p.Leu87Phe
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-51C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.177C>T
  hgvsp: ENST00000337425.5:c.177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-51C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.123C>T
  hgvsp: ENST00000380365.3:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-252C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3401
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16815
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu87Phe
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

14-94936056-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936056
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936056
    reference: chr 14
allele count: 1
allele frequency: 8.75702751458045e-6
allele num: 114194
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.176C>T
  hgvsp: ENSP00000337133.5:p.Ala59Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.258C>T
  hgvsp: ENST00000538527.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-52C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.176C>T
  hgvsp: ENSP00000298845.7:p.Ala59Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.122C>T
  hgvsp: ENSP00000369723.3:p.Ala41Val
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-52C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-253C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1931
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10489
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3490
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16819
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3376
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala59Val
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

14-94936057-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936057
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936057
    reference: chr 14
allele count: 4
allele frequency: 3.51172917544599e-5
allele num: 113904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.257G>A
  hgvsp: ENSP00000441511.1:p.Cys86Tyr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.121G>A
  hgvsp: ENSP00000369723.3:p.Ala41Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-53G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.175G>A
  hgvsp: ENSP00000298845.7:p.Ala59Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.175G>A
  hgvsp: ENSP00000337133.5:p.Ala59Thr
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-254G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-53G>A
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8558
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5553
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3490
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19950
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala59Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

14-94936062-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936062
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936062
    reference: chr 14
allele count: 3033
allele frequency: 2.676302414231258e-2
allele num: 113328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-58C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.116C>T
  hgvsp: ENSP00000369723.3:p.Thr39Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.252C>T
  hgvsp: ENST00000538527.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.170C>T
  hgvsp: ENSP00000337133.5:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-259C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.170C>T
  hgvsp: ENSP00000298845.7:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-58C>T
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 5.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 9232
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 6.25e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 2853
  bin: 4.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 7.5e0
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 8309
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 8.25e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 215
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 1.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 5.25e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 10120
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.25e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 2973
  bin: 9.75e1
  variant carriers: 1112
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 8.75e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 4877
  bin: 3.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 7.25e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 6.75e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 4.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 2866
  bin: 8.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 16096
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3359
  bin: 7.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 5335
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 1.75e1
  variant carriers: 5
hgvs: p.Thr57Ile
num of homozygotes: 52
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-94936065-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936065
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936065
    reference: chr 14
allele count: 5
allele frequency: 4.42791356712717e-5
allele num: 112920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-61G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-61G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.167G>A
  hgvsp: ENSP00000337133.5:p.Ser56Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-262G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.167G>A
  hgvsp: ENSP00000298845.7:p.Ser56Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.113G>A
  hgvsp: ENSP00000369723.3:p.Ser38Asn
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.249G>A
  hgvsp: ENST00000538527.1:c.249G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3006
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser56Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

14-94936067-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936067
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936067
    reference: chr 14
allele count: 1
allele frequency: 8.868078464758256e-6
allele num: 112764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.247G>A
  hgvsp: ENSP00000441511.1:p.Glu83Lys
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.111G>A
  hgvsp: ENST00000380365.3:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.165G>A
  hgvsp: ENST00000298845.7:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.165G>A
  hgvsp: ENST00000337425.5:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-63G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-63G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-264G>A
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19740
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16819
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2960
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu83Lys
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

14-94936072-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936072
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936072
    reference: chr 14
allele count: 2
allele frequency: 1.781927689374365e-5
allele num: 112238
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.160A>T
  hgvsp: ENSP00000337133.5:p.Thr54Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-269A>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.242A>T
  hgvsp: ENSP00000441511.1:p.His81Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-68A>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.106A>T
  hgvsp: ENSP00000369723.3:p.Thr36Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.160A>T
  hgvsp: ENSP00000298845.7:p.Thr54Ser
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-68A>T
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2566
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr54Ser
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

14-94936076-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936076
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936076
    reference: chr 14
allele count: 29
allele frequency: 2.599684452094091e-4
allele num: 111552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-72C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.156C>T
  hgvsp: ENST00000298845.7:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.238C>T
  hgvsp: ENSP00000441511.1:p.Leu80Phe
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-72C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-273C>T
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.156C>T
  hgvsp: ENST00000337425.5:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.102C>T
  hgvsp: ENST00000380365.3:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2099
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2294
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5572
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu80Phe
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

14-94936079-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936079
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936079
    reference: chr 14
allele count: 1
allele frequency: 8.969092507220119e-6
allele num: 111494
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.235T>C
  hgvsp: ENSP00000441511.1:p.Phe79Leu
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-276T>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.99T>C
  hgvsp: ENST00000380365.3:c.99T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-75T>C
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.153T>C
  hgvsp: ENST00000298845.7:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.153T>C
  hgvsp: ENST00000337425.5:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-75T>C
  variant of: http://identifiers.org/hgnc/15995
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2087
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19721
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2334
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2295
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe79Leu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

14-94936083-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936083
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936084
    reference: chr 14
allele count: 1
allele frequency: 9.012256669069936e-6
allele num: 110960
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-80dupC
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.148dupC
  hgvsp: ENSP00000298845.7:p.Arg50ProfsTer64
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.94dupC
  hgvsp: ENSP00000369723.3:p.Arg32ProfsTer126
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.230dupC
  hgvsp: ENSP00000441511.1:p.Pro78AlafsTer42
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.148dupC
  hgvsp: ENSP00000337133.5:p.Arg50ProfsTer126
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-80dupC
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-281dupC
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2525
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3003
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2294
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg50ProfsTer126
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

14-94936083-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 94936083
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 94936083
    reference: chr 14
allele count: 2
allele frequency: 1.802451333813987e-5
allele num: 110960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000409012
  ensembl transcript: ENST00000424550
  gene symbol: SERPINA9
  hgvsc: ENST00000424550.2:c.-19-280G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000445476
  ensembl transcript: ENST00000546329
  gene symbol: SERPINA9
  hgvsc: ENST00000546329.1:c.120-79G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000441511
  ensembl transcript: ENST00000538527
  gene symbol: SERPINA9
  hgvsc: ENST00000538527.1:c.231G>A
  hgvsp: ENST00000538527.1:c.231G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000414092
  ensembl transcript: ENST00000448305
  gene symbol: SERPINA9
  hgvsc: ENST00000448305.2:c.-67-79G>A
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000337133
  ensembl transcript: ENST00000337425
  gene symbol: SERPINA9
  hgvsc: ENST00000337425.5:c.149G>A
  hgvsp: ENSP00000337133.5:p.Arg50His
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000298845
  ensembl transcript: ENST00000298845
  gene symbol: SERPINA9
  hgvsc: ENST00000298845.7:c.149G>A
  hgvsp: ENSP00000298845.7:p.Arg50His
  variant of: http://identifiers.org/hgnc/15995
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170054
  ensembl protein: ENSP00000369723
  ensembl transcript: ENST00000380365
  gene symbol: SERPINA9
  hgvsc: ENST00000380365.3:c.95G>A
  hgvsp: ENSP00000369723.3:p.Arg32His
  variant of: http://identifiers.org/hgnc/15995
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2507
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2239
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2964
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg50His
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 18292
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6355
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2050
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3689
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.822e1

DP
type: SiteQuality
SIO_000300: 2.487864e6

FS
type: SiteQuality
SIO_000300: 1.641e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e0

QD
type: SiteQuality
SIO_000300: 9.710000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -2.149e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.85e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.08e-1

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18293
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.154e1

FS
type: SiteQuality
SIO_000300: 6.672e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

DP
type: SiteQuality
SIO_000300: 2.487845e6

MQRankSum
type: SiteQuality
SIO_000300: -8.159999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.324e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e-1

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18294
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2642
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6354
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22910
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.039983680130559e-4
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.387e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

FS
type: SiteQuality
SIO_000300: 2.862e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

MQRankSum
type: SiteQuality
SIO_000300: 5.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

DP
type: SiteQuality
SIO_000300: 2.48801e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.227e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3688
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2986
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18296
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.749e0

MQRankSum
type: SiteQuality
SIO_000300: 6.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.145e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.16e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 2.488008e6

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6351
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18297
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22924
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.98e-1

DP
type: SiteQuality
SIO_000300: 2.488002e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

QD
type: SiteQuality
SIO_000300: 1.328e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e0

MQ
type: SiteQuality
SIO_000300: 5.926e1

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22921
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3686
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

DP
type: SiteQuality
SIO_000300: 2.488052e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.443e0

FS
type: SiteQuality
SIO_000300: 3.255e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.116e1

MQ
type: SiteQuality
SIO_000300: 5.929e1

VQSLOD
type: SiteQuality
SIO_000300: -3.135e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.53e-1

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2046
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6349
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22904
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18323
bin: 9.75e1
variant carriers: 35

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 27
allele frequency: 1.635174418604651e-3
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.19871737241152e-4
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.99e-1

QD
type: SiteQuality
SIO_000300: 1.281e1

VQSLOD
type: SiteQuality
SIO_000300: 4.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.224e0

DP
type: SiteQuality
SIO_000300: 2.491038e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 5.24e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18301
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 3685
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
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GenotypeQuality
all individuals: 2046
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22916
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.274287039183863e-4
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.56e-2

MQ
type: SiteQuality
SIO_000300: 5.939e1

DP
type: SiteQuality
SIO_000300: 2.488271e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

QD
type: SiteQuality
SIO_000300: 1.431e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e-1

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3685
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2047
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18304
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2986
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22907
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variant carriers: 0

GenotypeQuality
all individuals: 2639
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1429
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.990110878034162e-5
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.727e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.54e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.325e1

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

DP
type: SiteQuality
SIO_000300: 2.487961e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

GenotypeQuality
all individuals: 22900
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6367
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3687
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variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1431
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18305
bin: 9.75e1
variant carriers: 6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.183137525915688e-4
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.915e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
SIO_000300: 2.708e0

QD
type: SiteQuality
SIO_000300: 1.309e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.81e-1

DP
type: SiteQuality
SIO_000300: 2.488291e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22885
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3695
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variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2047
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2986
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.039983680130559e-4
allele num: 9804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.68e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 4.213e0

DP
type: SiteQuality
SIO_000300: 2.48863e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.805e0

QD
type: SiteQuality
SIO_000300: 1.377e1

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2640
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22889
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18318
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.205e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

DP
type: SiteQuality
SIO_000300: 2.488735e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.392e0

QD
type: SiteQuality
SIO_000300: 2.591e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.27e-1

FS
type: SiteQuality
SIO_000300: 4.848e0

GenotypeQuality
all individuals: 2642
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3694
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1431
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6364
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18319
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2048
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.318571759795966e-4
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.411e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 2.488868e6

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

FS
type: SiteQuality
SIO_000300: 2.874e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.247e0

VQSLOD
type: SiteQuality
SIO_000300: 9.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
all individuals: 2195
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GenotypeQuality
all individuals: 33181
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3973
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.63e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.377e0

VQSLOD
type: SiteQuality
SIO_000300: 4.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.41e-2

FS
type: SiteQuality
SIO_000300: 5.39e-1

DP
type: SiteQuality
SIO_000300: 3.830724e6

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 164
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variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1304
bin: 9.25e1
variant carriers: 6

GenotypeQuality
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bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3973
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 902
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1839
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 4

East Asian
type: Population
allele count: 2828
allele frequency: 3.286843328684333e-1
allele num: 8604
num of homozygotes: 479

Other
type: Population
allele count: 165
allele frequency: 1.833333333333333e-1
allele num: 900
num of homozygotes: 13

European (Finnish)
type: Population
allele count: 1373
allele frequency: 2.076527525710829e-1
allele num: 6612
num of homozygotes: 150

Latino
type: Population
allele count: 2589
allele frequency: 2.237296923608711e-1
allele num: 11572
num of homozygotes: 279

European (Non-Finnish)
type: Population
allele count: 14850
allele frequency: 2.22538588341076e-1
allele num: 66730
num of homozygotes: 1649

African
type: Population
allele count: 354
allele frequency: 3.610771113831089e-2
allele num: 9804
num of homozygotes: 5

South Asian
type: Population
allele count: 2872
allele frequency: 1.739341085271318e-1
allele num: 16512
num of homozygotes: 261

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

DP
type: SiteQuality
SIO_000300: 3.830724e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

FS
type: SiteQuality
SIO_000300: 5.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.39e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.377e0

QD
type: SiteQuality
SIO_000300: 1.63e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.41e-2

GenotypeQuality
all individuals: 1508
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 21070
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GenotypeQuality
all individuals: 2270
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GenotypeQuality
all individuals: 2989
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GenotypeQuality
all individuals: 3546
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 6036
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 2.359e0

MQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

DP
type: SiteQuality
SIO_000300: 2.504602e6

VQSLOD
type: SiteQuality
SIO_000300: 7.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

QD
type: SiteQuality
SIO_000300: 1.545e1

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3546
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2519
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.318034306907742e-4
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.358e0

DP
type: SiteQuality
SIO_000300: 2.50439e6

QD
type: SiteQuality
SIO_000300: 1.604e1

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.618e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

MQ
type: SiteQuality
SIO_000300: 5.935e1

GenotypeQuality
all individuals: 3543
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20414
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.099e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.761e0

VQSLOD
type: SiteQuality
SIO_000300: 5.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

DP
type: SiteQuality
SIO_000300: 2.504204e6

QD
type: SiteQuality
SIO_000300: 1.536e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6033
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2520
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20415
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2987
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21079
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.62e-1

DP
type: SiteQuality
SIO_000300: 2.504167e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

QD
type: SiteQuality
SIO_000300: 1.234e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.932e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.157e0

MQ
type: SiteQuality
SIO_000300: 5.905e1

GenotypeQuality
all individuals: 2270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6033
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3544
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.090000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

DP
type: SiteQuality
SIO_000300: 2.504189e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.112e0

QD
type: SiteQuality
SIO_000300: 1.415e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.203e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20413
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21070
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2270
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.080799836768007e-4
allele num: 9802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.367e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.18e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

DP
type: SiteQuality
SIO_000300: 2.504111e6

FS
type: SiteQuality
SIO_000300: 1.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.08e-1

GenotypeQuality
all individuals: 21077
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3544
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2270
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6035
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.472e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.542e0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

DP
type: SiteQuality
SIO_000300: 2.503952e6

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6034
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20412
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2270
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.34e-1

QD
type: SiteQuality
SIO_000300: 2.982e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.636e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.45e-1

FS
type: SiteQuality
SIO_000300: 1.401e0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 2.504013e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21079
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.21e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.285e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.651e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 2.503735e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2991
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2517
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.633720930232558e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.001e1

VQSLOD
type: SiteQuality
SIO_000300: 4.41e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -3.68e-1

DP
type: SiteQuality
SIO_000300: 2.504052e6

QD
type: SiteQuality
SIO_000300: 1.379e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1506
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2517
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
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allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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SIO_000300: 2.164e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-2

QD
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.408e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.46e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -7.74e-1

QD
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
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BaseQRankSum
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SIO_000300: -2.074e0

ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
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DP
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.72e-1

MQ
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SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 4.259e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.715e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.956e0

InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 2.503264e6

FS
type: SiteQuality
SIO_000300: 4.096e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

QD
type: SiteQuality
SIO_000300: 3.74e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996703626011388e-5
allele num: 66740
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.503244e6

VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.46e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

FS
type: SiteQuality
SIO_000300: 5.142e0

MQRankSum
type: SiteQuality
SIO_000300: -2.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.193e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.23e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.383e0

MQ
type: SiteQuality
SIO_000300: 5.841e1

DP
type: SiteQuality
SIO_000300: 2.503203e6

MQRankSum
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.312e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.040399918384003e-4
allele num: 9802
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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DP
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ClippingRankSum
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MQRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.72e-1

VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 5
allele frequency: 4.320774282751469e-4
allele num: 11572
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
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East Asian
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allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
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South Asian
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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QD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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allele num: 6614
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South Asian
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Other
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BaseQRankSum
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QD
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ClippingRankSum
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MQRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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MQ
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GenotypeQuality
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variant carriers: 42

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 900
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 3.672719853091206e-3
allele num: 9802
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South Asian
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Latino
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allele frequency: 1.728011059270779e-4
allele num: 11574
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.495594317568783e-5
allele num: 66732
num of homozygotes: 0

East Asian
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allele num: 8628
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ReadPosRankSum
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MQ
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InbreedingCoeff
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-1

QD
type: SiteQuality
SIO_000300: 1.784e1

MQRankSum
type: SiteQuality
SIO_000300: -9.379999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.14e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2512
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.026e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 2.501406e6

MQRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

FS
type: SiteQuality
SIO_000300: 6.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.449e0

GenotypeQuality
all individuals: 6031
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20388
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.835e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

QD
type: SiteQuality
SIO_000300: 9.51e0

MQ
type: SiteQuality
SIO_000300: 5.884e1

DP
type: SiteQuality
SIO_000300: 2.50135e6

GenotypeQuality
all individuals: 6027
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2269
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997601918465228e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 2.501036e6

FS
type: SiteQuality
SIO_000300: 8.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.269e1

VQSLOD
type: SiteQuality
SIO_000300: 2.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.29e-1

GenotypeQuality
all individuals: 156
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3533
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21049
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 2269
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-1

DP
type: SiteQuality
SIO_000300: 2.501138e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.032e0

FS
type: SiteQuality
SIO_000300: 6.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -4.025e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-2

MQ
type: SiteQuality
SIO_000300: 5.909e1

QD
type: SiteQuality
SIO_000300: 1.059e1

GenotypeQuality
all individuals: 6028
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 2981
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20390
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1507
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

MQRankSum
type: SiteQuality
SIO_000300: -7.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.194e0

VQSLOD
type: SiteQuality
SIO_000300: 2.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 2.500802e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.31e-1

QD
type: SiteQuality
SIO_000300: 1.027e1

GenotypeQuality
all individuals: 2983
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20950
bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2265
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3522
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998770504093322e-5
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.094e0

DP
type: SiteQuality
SIO_000300: 2.499936e6

QD
type: SiteQuality
SIO_000300: 1.41e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 1507
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.478664192949907e-4
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.499936e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.094e0

MQRankSum
type: SiteQuality
SIO_000300: 6.21e-1

QD
type: SiteQuality
SIO_000300: 1.41e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 89
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5791
bin: 6.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 5

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 7

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 20272
bin: 6.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 89
allele frequency: 1.334372844762961e-3
allele num: 66698
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2733
allele frequency: 2.788206488471741e-1
allele num: 9802
num of homozygotes: 385

Other
type: Population
allele count: 13
allele frequency: 1.444444444444444e-2
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 201
allele frequency: 1.736651114567133e-2
allele num: 11574
num of homozygotes: 4

South Asian
type: Population
allele count: 4
allele frequency: 2.429248147698287e-4
allele num: 16466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

DP
type: SiteQuality
SIO_000300: 2.580621e6

MQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.232e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.756e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 3576
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GenotypeQuality
all individuals: 101
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 19988
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 3008
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6086
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 16
allele frequency: 1.632319934707203e-3
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591568762957844e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.99685110211426e-5
allele num: 66690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.398e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.487144e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 8.9e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
SIO_000300: 3.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.12e0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
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GenotypeQuality
all individuals: 113
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 21099
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1524
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3004
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.040622719532961e-4
allele num: 16444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999130252226854e-5
allele num: 66686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 2.486544e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

QD
type: SiteQuality
SIO_000300: 1.371e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

FS
type: SiteQuality
SIO_000300: 4.206e0

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

GenotypeQuality
all individuals: 2532
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21080
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2298
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19978
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6083
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.355e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.09e-1

QD
type: SiteQuality
SIO_000300: 1.42e1

DP
type: SiteQuality
SIO_000300: 2.485228e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.59e-1

GenotypeQuality
all individuals: 2490
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19963
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504619180885318e-5
allele num: 66462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15798
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.681e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.562e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

DP
type: SiteQuality
SIO_000300: 2.468276e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.362e0

QD
type: SiteQuality
SIO_000300: 1.503e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.3e-1

GenotypeQuality
all individuals: 2473
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5823
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15782
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.084133142740453e-4
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.029617144233085e-5
allele num: 66448
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

QD
type: SiteQuality
SIO_000300: 1.28e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.379e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.95e-1

DP
type: SiteQuality
SIO_000300: 2.468439e6

GenotypeQuality
all individuals: 106
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19957
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 977
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1521
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2470
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5832
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2290
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728011059270779e-4
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.337938902268983e-5
allele num: 15778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.88e-1

FS
type: SiteQuality
SIO_000300: 1.9404e1

VQSLOD
type: SiteQuality
SIO_000300: -2.862e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

DP
type: SiteQuality
SIO_000300: 2.467815e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.236e1

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19673
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5758
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19961
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 2979
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2444
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.021033285685113e-4
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.963788300835655e-4
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507704369327262e-5
allele num: 66326
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.529119874640899e-5
allele num: 15316
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.173e1

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

MQRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.45685e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

FS
type: SiteQuality
SIO_000300: 5.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.555e0

GenotypeQuality
all individuals: 2441
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5729
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2285
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19952
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1519
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
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variant carriers: 0

GenotypeQuality
all individuals: 64
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variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508705229172324e-5
allele num: 66282
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.084133142740453e-4
allele num: 9794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

DP
type: SiteQuality
SIO_000300: 2.452125e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 2.453e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.5e-2

QD
type: SiteQuality
SIO_000300: 1.5e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 2431
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5663
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19950
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3511
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511990081345066e-5
allele num: 66138
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.882e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.672e0

DP
type: SiteQuality
SIO_000300: 2.441071e6

QD
type: SiteQuality
SIO_000300: 1.262e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

FS
type: SiteQuality
SIO_000300: 9.5e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeQuality
all individuals: 2427
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
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variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2980
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5635
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.064977523498161e-4
allele num: 9788
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.91e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e0

QD
type: SiteQuality
SIO_000300: 1.225e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.497e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.363e0

DP
type: SiteQuality
SIO_000300: 2.438779e6

GenotypeQuality
all individuals: 196
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19952
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2975
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
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variant carriers: 0

GenotypeQuality
all individuals: 17944
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3500
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.325040688212044e-4
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517266492686776e-5
allele num: 65908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.090187180941577e-5
allele num: 14104
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.773e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

QD
type: SiteQuality
SIO_000300: 1.129e1

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

DP
type: SiteQuality
SIO_000300: 2.426995e6

GenotypeQuality
all individuals: 214
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19950
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5604
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2970
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3501
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17743
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162790697674419e-4
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.160246312473149e-5
allele num: 13966
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.02291325695581e-4
allele num: 9776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

QD
type: SiteQuality
SIO_000300: 1.256e1

DP
type: SiteQuality
SIO_000300: 2.423527e6

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 7.729e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.92e-1

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 5604
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518326197200206e-5
allele num: 65862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13966
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 2.423527e6

QD
type: SiteQuality
SIO_000300: 1.256e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

FS
type: SiteQuality
SIO_000300: 7.729e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.92e-1

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 17794
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13958
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518418415378542e-5
allele num: 65858
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.927e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e-1

DP
type: SiteQuality
SIO_000300: 2.423078e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.898e0

MQRankSum
type: SiteQuality
SIO_000300: -1.277e0

FS
type: SiteQuality
SIO_000300: 7.37e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.798e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.55e-1

QD
type: SiteQuality
SIO_000300: 1.696e1

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3499
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variant carriers: 0

GenotypeQuality
all individuals: 2287
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.023122570083896e-4
allele num: 9774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13810
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.37e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.021e1

DP
type: SiteQuality
SIO_000300: 2.420534e6

FS
type: SiteQuality
SIO_000300: 4.496e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

VQSLOD
type: SiteQuality
SIO_000300: -1.147e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.396e0

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3497
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17320
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2287
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2406
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variant carriers: 0

GenotypeQuality
all individuals: 19952
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1519
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
all individuals: 2966
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522440777053773e-5
allele num: 65684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.504e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.473e0

MQRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 4.006e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

DP
type: SiteQuality
SIO_000300: 2.413648e6

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3604
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1518
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variant carriers: 0

GenotypeQuality
all individuals: 2287
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2407
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variant carriers: 0

GenotypeQuality
all individuals: 19953
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 17182
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.816658911121452e-4
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: 8.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.822e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.915e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-1

FS
type: SiteQuality
SIO_000300: 9.805999999999999e0

DP
type: SiteQuality
SIO_000300: 2.411265e6

QD
type: SiteQuality
SIO_000300: 1.35e1

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2967
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3653
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12638
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.491620111731844e-4
allele num: 8592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.809e0

DP
type: SiteQuality
SIO_000300: 2.404533e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: 5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.42e-1

QD
type: SiteQuality
SIO_000300: 1.11e1

MQRankSum
type: SiteQuality
SIO_000300: -4.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

GenotypeQuality
all individuals: 146
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2968
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 308
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5555
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1519
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 7.5e0
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GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.614457831325301e-3
allele num: 830
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.939e0

DP
type: SiteQuality
SIO_000300: 2.398049e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 3.525e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.378e1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2398
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11832
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65082
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164686699277894e-4
allele num: 8586
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.12e-1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.188e1

FS
type: SiteQuality
SIO_000300: 3.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 2.397527e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.127e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2286
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2969
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.433476394849786e-4
allele num: 11650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65006
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.768e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.26e0

QD
type: SiteQuality
SIO_000300: 1.018e1

DP
type: SiteQuality
SIO_000300: 2.396623e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

GenotypeQuality
all individuals: 2194
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 173
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2920
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 21444
bin: 9.75e1
variant carriers: 2965

GenotypeQuality
all individuals: 2304
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1446
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 245
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 7

Other
type: Population
allele count: 27
allele frequency: 3.284671532846715e-2
allele num: 822
num of homozygotes: 0

Latino
type: Population
allele count: 136
allele frequency: 1.181581233709818e-2
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1938
allele frequency: 2.987881964786778e-2
allele num: 64862
num of homozygotes: 29

African
type: Population
allele count: 436
allele frequency: 4.491141326740832e-2
allele num: 9708
num of homozygotes: 10

South Asian
type: Population
allele count: 145
allele frequency: 1.288888888888889e-2
allele num: 11250
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 351
allele frequency: 5.30692470517085e-2
allele num: 6614
num of homozygotes: 12

QD
type: SiteQuality
SIO_000300: 1.407e1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.991e0

VQSLOD
type: SiteQuality
SIO_000300: 4.57e0

DP
type: SiteQuality
SIO_000300: 2.511529e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.43e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

GenotypeQuality
all individuals: 187
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19742
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 166
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5589
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3520
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16826
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3046
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.723439092959313e-5
allele num: 64738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.016e-1

QD
type: SiteQuality
SIO_000300: 1.941e1

FS
type: SiteQuality
SIO_000300: 5.46e-1

DP
type: SiteQuality
SIO_000300: 2.388301e6

MQRankSum
type: SiteQuality
SIO_000300: -2.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.88e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.845e0

GenotypeQuality
all individuals: 1612
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2296
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3519
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3004
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variant carriers: 0

GenotypeQuality
all individuals: 2425
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546025169289756e-5
allele num: 64682
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.697e0

FS
type: SiteQuality
SIO_000300: 2.914e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.39e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

QD
type: SiteQuality
SIO_000300: 1.368e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.74e-1

DP
type: SiteQuality
SIO_000300: 2.386697e6

GenotypeQuality
all individuals: 90
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2425
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3518
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 244
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19741
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2297
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3003
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16802
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.482268158543523e-5
allele num: 10546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.549426712116517e-5
allele num: 64540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 1.875e0

VQSLOD
type: SiteQuality
SIO_000300: 6.35e-1

QD
type: SiteQuality
SIO_000300: 1.335e1

DP
type: SiteQuality
SIO_000300: 2.382967e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

GenotypeQuality
all individuals: 3003
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16749
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3520
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2271
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19745
bin: 9.75e1
variant carriers: 29

Latino
type: Population
allele count: 2
allele frequency: 1.740038280842179e-4
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

African
type: Population
allele count: 27
allele frequency: 2.799087704748082e-3
allele num: 9646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

DP
type: SiteQuality
SIO_000300: 2.37967e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.489e0

QD
type: SiteQuality
SIO_000300: 1.397e1

GenotypeQuality
all individuals: 170
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3521
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3006
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2077
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1521
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16776
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9986
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552361141295911e-5
allele num: 64418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 2.37716e6

FS
type: SiteQuality
SIO_000300: 7.243e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

QD
type: SiteQuality
SIO_000300: 1.167e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16744
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19724
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2427
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5569
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.038421599169263e-4
allele num: 9630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9646
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

FS
type: SiteQuality
SIO_000300: 1.823e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.449999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.368e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

DP
type: SiteQuality
SIO_000300: 2.374533e6