12-66859069-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859069
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859069
    reference: chr 12
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.858A>C
  hgvsp: ENST00000359742.4:c.858A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.690A>C
  hgvsp: ENST00000540433.1:c.690A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50330A>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.690A>C
  hgvsp: ENST00000536215.1:c.690A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.319A>C
  hgvsp: ENST00000543172.1:c.319A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.302A>C
  hgvsp: ENST00000538164.1:c.302A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.858A>C
  hgvsp: ENST00000286445.7:c.858A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.134A>C
  hgvsp: ENST00000535002.1:c.134A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.858A>C
  hgvsp: ENST00000398016.3:c.858A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.858A>C
  hgvsp: ENST00000538211.1:c.858A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2266
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala286Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/12-66859072-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859072
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859072
    reference: chr 12
allele count: 1
allele frequency: 8.281573498964803e-6
allele num: 120750
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.687T>G
  hgvsp: ENST00000536215.1:c.687T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.855T>G
  hgvsp: ENST00000398016.3:c.855T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.131T>G
  hgvsp: ENST00000535002.1:c.131T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.316T>G
  hgvsp: ENST00000543172.1:c.316T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.855T>G
  hgvsp: ENST00000538211.1:c.855T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.855T>G
  hgvsp: ENST00000286445.7:c.855T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50327T>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.687T>G
  hgvsp: ENST00000540433.1:c.687T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.299T>G
  hgvsp: ENST00000538164.1:c.299T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.855T>G
  hgvsp: ENST00000359742.4:c.855T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser285Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

12-66859072-AGATTTGAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859072
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859064
    reference: chr 12
allele count: 1
allele frequency: 8.281573498964803e-6
allele num: 120750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.847_854delATCAAATC
  hgvsp: ENSP00000286445.7:p.Ile283CysfsTer41
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.847_854delATCAAATC
  hgvsp: ENSP00000352780.4:p.Ile283CysfsTer41
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.679_686delATCAAATC
  hgvsp: ENSP00000446024.1:p.Ile227CysfsTer41
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.308_315delATCAAATC
  hgvsp: ENSP00000443860.1:p.Ile104CysfsTer41
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.847_854delATCAAATC
  hgvsp: ENSP00000381098.3:p.Ile283CysfsTer41
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.847_854delATCAAATC
  hgvsp: ENSP00000446047.1:p.Ile283CysfsTer41
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.123_130delATCAAATC
  hgvsp: ENSP00000440918.1:p.Ile42CysfsTer7
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.291_298delATCAAATC
  hgvsp: ENSP00000439053.1:p.Ile98CysfsTer41
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.679_686delATCAAATC
  hgvsp: ENSP00000446011.1:p.Ile227CysfsTer41
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3473
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile283CysfsTer41
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: AGATTTGAT
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

12-66859073-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859073
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859073
    reference: chr 12
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.315C>T
  hgvsp: ENSP00000443860.1:p.Ser106Phe
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.130C>T
  hgvsp: ENSP00000440918.1:p.Ser44Phe
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.854C>T
  hgvsp: ENSP00000286445.7:p.Ser285Phe
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.298C>T
  hgvsp: ENSP00000439053.1:p.Ser100Phe
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.854C>T
  hgvsp: ENSP00000352780.4:p.Ser285Phe
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50326C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.854C>T
  hgvsp: ENSP00000446047.1:p.Ser285Phe
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.854C>T
  hgvsp: ENSP00000381098.3:p.Ser285Phe
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.686C>T
  hgvsp: ENSP00000446011.1:p.Ser229Phe
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.686C>T
  hgvsp: ENSP00000446024.1:p.Ser229Phe
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser285Phe
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

12-66859094-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859094
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859094
    reference: chr 12
allele count: 1
allele frequency: 8.281299170213822e-6
allele num: 120754
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.109T>C
  hgvsp: ENSP00000440918.1:p.Ile37Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.665T>C
  hgvsp: ENSP00000446011.1:p.Ile222Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.833T>C
  hgvsp: ENSP00000446047.1:p.Ile278Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.665T>C
  hgvsp: ENSP00000446024.1:p.Ile222Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.294T>C
  hgvsp: ENSP00000443860.1:p.Ile99Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.833T>C
  hgvsp: ENSP00000352780.4:p.Ile278Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50305T>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.277T>C
  hgvsp: ENSP00000439053.1:p.Ile93Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.833T>C
  hgvsp: ENSP00000286445.7:p.Ile278Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.833T>C
  hgvsp: ENSP00000381098.3:p.Ile278Thr
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile278Thr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP

12-66859096-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859096
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859096
    reference: chr 12
allele count: 2
allele frequency: 1.656259834042764e-5
allele num: 120754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.831C>T
  hgvsp: ENST00000538211.1:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50303C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.292C>T
  hgvsp: ENST00000543172.1:c.292C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.831C>T
  hgvsp: ENST00000359742.4:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.831C>T
  hgvsp: ENST00000286445.7:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.663C>T
  hgvsp: ENST00000540433.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.275C>T
  hgvsp: ENST00000538164.1:c.275C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.663C>T
  hgvsp: ENST00000536215.1:c.663C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.107C>T
  hgvsp: ENST00000535002.1:c.107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.831C>T
  hgvsp: ENST00000398016.3:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19336
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15916
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val277Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

12-66859110-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859110
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859110
    reference: chr 12
allele count: 86
allele frequency: 7.121917286383888e-4
allele num: 120754
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.93T>C
  hgvsp: ENSP00000440918.1:p.Cys32Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.649T>C
  hgvsp: ENSP00000446024.1:p.Cys217Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.817T>C
  hgvsp: ENSP00000381098.3:p.Cys273Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.817T>C
  hgvsp: ENSP00000286445.7:p.Cys273Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.278T>C
  hgvsp: ENSP00000443860.1:p.Cys94Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.817T>C
  hgvsp: ENSP00000352780.4:p.Cys273Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.261T>C
  hgvsp: ENSP00000439053.1:p.Cys88Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50289T>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.817T>C
  hgvsp: ENSP00000446047.1:p.Cys273Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.649T>C
  hgvsp: ENSP00000446011.1:p.Cys217Arg
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 9.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15901
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Cys273Arg
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

12-66859117-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859117
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859117
    reference: chr 12
allele count: 3
allele frequency: 2.484389751064147e-5
allele num: 120754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.86G>A
  hgvsp: ENST00000535002.1:c.86G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.254G>A
  hgvsp: ENST00000538164.1:c.254G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.642G>A
  hgvsp: ENST00000536215.1:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50282G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.642G>A
  hgvsp: ENST00000540433.1:c.642G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.810G>A
  hgvsp: ENST00000538211.1:c.810G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.271G>A
  hgvsp: ENST00000543172.1:c.271G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.810G>A
  hgvsp: ENST00000398016.3:c.810G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.810G>A
  hgvsp: ENST00000359742.4:c.810G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.810G>A
  hgvsp: ENST00000286445.7:c.810G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2266
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser270Ser
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

12-66859128-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859128
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859128
    reference: chr 12
allele count: 1
allele frequency: 8.281710670156027e-6
allele num: 120748
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50271C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.75C>T
  hgvsp: ENST00000535002.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.799C>T
  hgvsp: ENST00000286445.7:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.799C>T
  hgvsp: ENST00000398016.3:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.243C>T
  hgvsp: ENST00000538164.1:c.243C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.260C>T
  hgvsp: ENST00000543172.1:c.260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.799C>T
  hgvsp: ENST00000538211.1:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.631C>T
  hgvsp: ENST00000536215.1:c.631C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.799C>T
  hgvsp: ENST00000359742.4:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.631C>T
  hgvsp: ENST00000540433.1:c.631C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu267Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

12-66859130-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859130
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859130
    reference: chr 12
allele count: 3
allele frequency: 2.484513201046808e-5
allele num: 120748
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50269C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.797C>T
  hgvsp: ENSP00000286445.7:p.Ala266Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.73C>T
  hgvsp: ENSP00000440918.1:p.Ala25Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.629C>T
  hgvsp: ENSP00000446024.1:p.Ala210Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.258C>T
  hgvsp: ENSP00000443860.1:p.Ala87Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.797C>T
  hgvsp: ENSP00000352780.4:p.Ala266Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.797C>T
  hgvsp: ENSP00000446047.1:p.Ala266Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.797C>T
  hgvsp: ENSP00000381098.3:p.Ala266Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.241C>T
  hgvsp: ENSP00000439053.1:p.Ala81Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.629C>T
  hgvsp: ENSP00000446011.1:p.Ala210Val
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala266Val
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD

12-66859138-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859138
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859138
    reference: chr 12
allele count: 2
allele frequency: 1.656369569178275e-5
allele num: 120746
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.789T>C
  hgvsp: ENST00000359742.4:c.789T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.789T>C
  hgvsp: ENST00000286445.7:c.789T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.250T>C
  hgvsp: ENST00000543172.1:c.250T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.789T>C
  hgvsp: ENST00000398016.3:c.789T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.233T>C
  hgvsp: ENST00000538164.1:c.233T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.789T>C
  hgvsp: ENST00000538211.1:c.789T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.621T>C
  hgvsp: ENST00000540433.1:c.621T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.621T>C
  hgvsp: ENST00000536215.1:c.621T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.65T>C
  hgvsp: ENST00000535002.1:c.65T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50261T>C
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19343
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu263Leu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

12-66859146-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859146
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859146
    reference: chr 12
allele count: 3
allele frequency: 2.484636663298604e-5
allele num: 120742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50253G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.781G>A
  hgvsp: ENSP00000446047.1:p.Ala261Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.781G>A
  hgvsp: ENSP00000381098.3:p.Ala261Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.225G>A
  hgvsp: ENSP00000439053.1:p.Ala76Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.613G>A
  hgvsp: ENSP00000446024.1:p.Ala205Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.242G>A
  hgvsp: ENSP00000443860.1:p.Ala82Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.57G>A
  hgvsp: ENSP00000440918.1:p.Ala20Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.613G>A
  hgvsp: ENSP00000446011.1:p.Ala205Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.781G>A
  hgvsp: ENSP00000286445.7:p.Ala261Thr
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.781G>A
  hgvsp: ENSP00000352780.4:p.Ala261Thr
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala261Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum

12-66859154-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859154
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859154
    reference: chr 12
allele count: 8
allele frequency: 6.625807520291536e-5
allele num: 120740
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.605C>T
  hgvsp: ENSP00000446024.1:p.Thr202Ile
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.773C>T
  hgvsp: ENSP00000381098.3:p.Thr258Ile
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.773C>T
  hgvsp: ENSP00000446047.1:p.Thr258Ile
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.49C>T
  hgvsp: ENSP00000440918.1:p.Thr17Ile
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.773C>T
  hgvsp: ENSP00000352780.4:p.Thr258Ile
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.234C>T
  hgvsp: ENSP00000443860.1:p.Thr79Ile
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.217C>T
  hgvsp: ENSP00000439053.1:p.Thr73Ile
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.773C>T
  hgvsp: ENSP00000286445.7:p.Thr258Ile
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50245C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.605C>T
  hgvsp: ENSP00000446011.1:p.Thr202Ile
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6467
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9788
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr258Ile
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

12-66859157-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859157
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859157
    reference: chr 12
allele count: 1
allele frequency: 8.282122210995345e-6
allele num: 120742
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.46A>G
  hgvsp: ENSP00000440918.1:p.Lys16Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.231A>G
  hgvsp: ENSP00000443860.1:p.Lys78Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.602A>G
  hgvsp: ENSP00000446024.1:p.Lys201Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.214A>G
  hgvsp: ENSP00000439053.1:p.Lys72Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.770A>G
  hgvsp: ENSP00000381098.3:p.Lys257Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.770A>G
  hgvsp: ENSP00000446047.1:p.Lys257Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50242A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.770A>G
  hgvsp: ENSP00000352780.4:p.Lys257Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.602A>G
  hgvsp: ENSP00000446011.1:p.Lys201Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.770A>G
  hgvsp: ENSP00000286445.7:p.Lys257Arg
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Lys257Arg
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

12-66859167-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859167
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859167
    reference: chr 12
allele count: 1
allele frequency: 8.282945415389712e-6
allele num: 120730
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.760G>A
  hgvsp: ENSP00000446047.1:p.Glu254Lys
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.204G>A
  hgvsp: ENSP00000439053.1:p.Glu69Lys
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.221G>A
  hgvsp: ENSP00000443860.1:p.Glu75Lys
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.36G>A
  hgvsp: ENSP00000440918.1:p.Glu13Lys
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.592G>A
  hgvsp: ENSP00000446011.1:p.Glu198Lys
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50232G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.760G>A
  hgvsp: ENSP00000352780.4:p.Glu254Lys
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.760G>A
  hgvsp: ENSP00000381098.3:p.Glu254Lys
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.760G>A
  hgvsp: ENSP00000286445.7:p.Glu254Lys
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.592G>A
  hgvsp: ENSP00000446024.1:p.Glu198Lys
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4672
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu254Lys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum

12-66859177-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859177
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859177
    reference: chr 12
allele count: 1
allele frequency: 8.284043275842073e-6
allele num: 120714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.194A>G
  hgvsp: ENST00000538164.1:c.194A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.26A>G
  hgvsp: ENST00000535002.1:c.26A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.750A>G
  hgvsp: ENST00000398016.3:c.750A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.211A>G
  hgvsp: ENST00000543172.1:c.211A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.750A>G
  hgvsp: ENST00000359742.4:c.750A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.582A>G
  hgvsp: ENST00000536215.1:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.750A>G
  hgvsp: ENST00000538211.1:c.750A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.582A>G
  hgvsp: ENST00000540433.1:c.582A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.750A>G
  hgvsp: ENST00000286445.7:c.750A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50222A>G
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6415
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro250Pro
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/12-66859181-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859181
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859181
    reference: chr 12
allele count: 5
allele frequency: 4.142158893215143e-5
allele num: 120710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50218G>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.578G>T
  hgvsp: ENSP00000446011.1:p.Gly193Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.746G>T
  hgvsp: ENSP00000352780.4:p.Gly249Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.578G>T
  hgvsp: ENSP00000446024.1:p.Gly193Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.746G>T
  hgvsp: ENSP00000446047.1:p.Gly249Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.22G>T
  hgvsp: ENSP00000440918.1:p.Gly8Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.207G>T
  hgvsp: ENSP00000443860.1:p.Gly70Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.190G>T
  hgvsp: ENSP00000439053.1:p.Gly64Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.746G>T
  hgvsp: ENSP00000381098.3:p.Gly249Val
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.746G>T
  hgvsp: ENSP00000286445.7:p.Gly249Val
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly249Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

12-66859181-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859181
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859181
    reference: chr 12
allele count: 1
allele frequency: 8.284317786430287e-6
allele num: 120710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.207G>A
  hgvsp: ENSP00000443860.1:p.Gly70Glu
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.746G>A
  hgvsp: ENSP00000446047.1:p.Gly249Glu
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.578G>A
  hgvsp: ENSP00000446011.1:p.Gly193Glu
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.746G>A
  hgvsp: ENSP00000381098.3:p.Gly249Glu
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.22G>A
  hgvsp: ENSP00000440918.1:p.Gly8Glu
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.190G>A
  hgvsp: ENSP00000439053.1:p.Gly64Glu
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50218G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.746G>A
  hgvsp: ENSP00000286445.7:p.Gly249Glu
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.578G>A
  hgvsp: ENSP00000446024.1:p.Gly193Glu
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.746G>A
  hgvsp: ENSP00000352780.4:p.Gly249Glu
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19347
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3469
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly249Glu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

12-66859182-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859182
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859182
    reference: chr 12
allele count: 5
allele frequency: 4.142776654624996e-5
allele num: 120692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.206G>A
  hgvsp: ENSP00000443860.1:p.Gly70Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.577G>A
  hgvsp: ENSP00000446024.1:p.Gly193Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.745G>A
  hgvsp: ENSP00000381098.3:p.Gly249Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.745G>A
  hgvsp: ENSP00000352780.4:p.Gly249Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.577G>A
  hgvsp: ENSP00000446011.1:p.Gly193Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.21G>A
  hgvsp: ENSP00000440918.1:p.Gly8Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.189G>A
  hgvsp: ENSP00000439053.1:p.Gly64Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.745G>A
  hgvsp: ENSP00000446047.1:p.Gly249Arg
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50217G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.745G>A
  hgvsp: ENSP00000286445.7:p.Gly249Arg
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15920
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9551
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Gly249Arg
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

12-66859189-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859189
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859189
    reference: chr 12
allele count: 5
allele frequency: 4.143119935035879e-5
allele num: 120682
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.738A>G
  hgvsp: ENST00000538211.1:c.738A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.570A>G
  hgvsp: ENST00000540433.1:c.570A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50210A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.738A>G
  hgvsp: ENST00000359742.4:c.738A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.738A>G
  hgvsp: ENST00000398016.3:c.738A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.199A>G
  hgvsp: ENST00000543172.1:c.199A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.182A>G
  hgvsp: ENST00000538164.1:c.182A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.570A>G
  hgvsp: ENST00000536215.1:c.570A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.738A>G
  hgvsp: ENST00000286445.7:c.738A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.14A>G
  hgvsp: ENST00000535002.1:c.14A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr246Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

12-66859192-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859192
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859192
    reference: chr 12
allele count: 2
allele frequency: 1.657687525901368e-5
allele num: 120650
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.179A>G
  hgvsp: ENST00000538164.1:c.179A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.735A>G
  hgvsp: ENST00000286445.7:c.735A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000440918
  ensembl transcript: ENST00000535002
  gene symbol: GRIP1
  hgvsc: ENST00000535002.1:c.11A>G
  hgvsp: ENST00000535002.1:c.11A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.735A>G
  hgvsp: ENST00000359742.4:c.735A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.735A>G
  hgvsp: ENST00000538211.1:c.735A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.196A>G
  hgvsp: ENST00000543172.1:c.196A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.567A>G
  hgvsp: ENST00000536215.1:c.567A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.567A>G
  hgvsp: ENST00000540433.1:c.567A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.735A>G
  hgvsp: ENST00000398016.3:c.735A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50207A>G
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala245Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

12-66859221-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859221
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859221
    reference: chr 12
allele count: 25265
allele frequency: 2.131923583218011e-1
allele num: 118508
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50178A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.186-19A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.557-19A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.725-19A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.725-19A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.725-19A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.169-19A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.557-19A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.725-19A>G
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 15935
  bin: 2.75e1
  variant carriers: 2904
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 1.75e1
  variant carriers: 603
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 3564
  bin: 1.25e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 489
genotype depth: GenotypeDepth
  all individuals: 6768
  bin: 3.75e1
  variant carriers: 3365
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 5.25e1
  variant carriers: 1264
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 4.25e1
  variant carriers: 2801
genotype depth: GenotypeDepth
  all individuals: 5241
  bin: 2.25e1
  variant carriers: 1674
genotype depth: GenotypeDepth
  all individuals: 13087
  bin: 3.25e1
  variant carriers: 3638
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 5.75e1
  variant carriers: 874
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 4.75e1
  variant carriers: 1935
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 9.75e1
  variant carriers: 609
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.25e1
  variant carriers: 470
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.75e1
  variant carriers: 329
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 238
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 6.25e1
  variant carriers: 660
genotype quality: GenotypeQuality
  all individuals: 15966
  bin: 6.25e1
  variant carriers: 81
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 8.75e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 3.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 8.25e1
  variant carriers: 191
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.5e0
  variant carriers: 6
num of homozygotes: 3037
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ

12-66859223-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859223
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859223
    reference: chr 12
allele count: 1
allele frequency: 8.483491126268282e-6
allele num: 117876
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.557-21C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.186-21C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.169-21C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.725-21C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50176C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.725-21C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.725-21C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.557-21C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.725-21C>T
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6622
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23943
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2581
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

12-66859228-CAAAACAAAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859228
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859219
    reference: chr 12
allele count: 2
allele frequency: 1.705320600272851e-5
allele num: 117280
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9750
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4064
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7883
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2525
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: CAAAACAAAT
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

12-66859230-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859230
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859230
    reference: chr 12
allele count: 2
allele frequency: 1.73460537727667e-5
allele num: 115300
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.725-28T>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.557-28T>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.186-28T>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.725-28T>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.169-28T>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50169T>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.557-28T>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.725-28T>C
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.725-28T>C
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7837
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12105
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14086
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4837
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3488
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/12-66859231-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859231
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859231
    reference: chr 12
allele count: 2
allele frequency: 1.734936414580406e-5
allele num: 115278
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50168T>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.557-29T>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.725-29T>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.169-29T>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.725-29T>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.725-29T>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.725-29T>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.557-29T>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.186-29T>G
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7701
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12724
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12272
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3713
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

12-66859237-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859237
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859237
    reference: chr 12
allele count: 4
allele frequency: 3.482379161443098e-5
allele num: 114864
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.725-35A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.186-35A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50162A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.725-35A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.557-35A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.169-35A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.557-35A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.725-35A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.725-35A>T
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6974
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12726
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14010
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12595
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6757
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4782
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

12-66859246-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66859246
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66859246
    reference: chr 12
allele count: 1
allele frequency: 8.92889031751134e-6
allele num: 111996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.557-44A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.725-44A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.186-44A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.169-44A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.725-44A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+50153A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.725-44A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.557-44A>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.725-44A>T
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16669
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13611
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2913
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8086
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1005
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

12-66909353-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66909353
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66909353
    reference: chr 12
allele count: 7
allele frequency: 5.797677615994964e-5
allele num: 120738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.168+46A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.724+46A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.185+46A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.724+46A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+46A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.724+46A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.724+46A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.556+46A>G
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.556+46A>G
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45619
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

12-66909356-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66909356
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66909356
    reference: chr 12
allele count: 2
allele frequency: 1.656726308813784e-5
allele num: 120720
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.724+43G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.168+43G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+43G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.185+43G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.724+43G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.724+43G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.556+43G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.724+43G>A
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.556+43G>A
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45619
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

12-66909357-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 66909357
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 66909357
    reference: chr 12
allele count: 4
allele frequency: 3.312958637711408e-5
allele num: 120738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000286445
  ensembl transcript: ENST00000286445
  gene symbol: GRIP1
  hgvsc: ENST00000286445.7:c.724+42C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443006
  ensembl transcript: ENST00000540854
  gene symbol: GRIP1
  hgvsc: ENST00000540854.1:c.337+42C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446047
  ensembl transcript: ENST00000538211
  gene symbol: GRIP1
  hgvsc: ENST00000538211.1:c.724+42C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446024
  ensembl transcript: ENST00000540433
  gene symbol: GRIP1
  hgvsc: ENST00000540433.1:c.556+42C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000381098
  ensembl transcript: ENST00000398016
  gene symbol: GRIP1
  hgvsc: ENST00000398016.3:c.724+42C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000439053
  ensembl transcript: ENST00000538164
  gene symbol: GRIP1
  hgvsc: ENST00000538164.1:c.168+42C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000443860
  ensembl transcript: ENST00000543172
  gene symbol: GRIP1
  hgvsc: ENST00000543172.1:c.185+42C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000446011
  ensembl transcript: ENST00000536215
  gene symbol: GRIP1
  hgvsc: ENST00000536215.1:c.556+42C>T
  variant of: http://identifiers.org/hgnc/18708
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000155974
  ensembl protein: ENSP00000352780
  ensembl transcript: ENST00000359742
  gene symbol: GRIP1
  hgvsc: ENST00000359742.4:c.724+42C>T
  variant of: http://identifiers.org/hgnc/18708
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45619
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-72180423-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180423
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180423
    reference: chr 15
allele count: 1
allele frequency: 8.272667107875579e-6
allele num: 120880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1726C>T
  hgvsp: ENSP00000457945.1:p.Ala576Val
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5177C>T
  hgvsp: ENSP00000348349.5:p.Ala1726Val
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.526C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5177C>T
  hgvsp: ENSP00000456192.1:p.Ala1726Val
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5120C>T
  hgvsp: ENSP00000398250.1:p.Ala1707Val
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5390C>T
  hgvsp: ENSP00000399162.1:p.Ala1797Val
  variant of: http://identifiers.org/hgnc/7608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17202
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37449
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala1726Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

15-72180432-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180432
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180432
    reference: chr 15
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5111A>G
  hgvsp: ENSP00000398250.1:p.Asp1704Gly
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5381A>G
  hgvsp: ENSP00000399162.1:p.Asp1794Gly
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1717A>G
  hgvsp: ENSP00000457945.1:p.Asp573Gly
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5168A>G
  hgvsp: ENSP00000456192.1:p.Asp1723Gly
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.517A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5168A>G
  hgvsp: ENSP00000348349.5:p.Asp1723Gly
  variant of: http://identifiers.org/hgnc/7608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6806
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37309
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp1723Gly
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

15-72180440-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180440
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180440
    reference: chr 15
allele count: 2255
allele frequency: 1.870220777282001e-2
allele num: 120574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1709G>A
  hgvsp: ENST00000561618.1:c.1709G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5160G>A
  hgvsp: ENST00000564571.1:c.5160G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5160G>A
  hgvsp: ENST00000356056.5:c.5160G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.509G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5103G>A
  hgvsp: ENST00000444904.1:c.5103G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5373G>A
  hgvsp: ENST00000424560.1:c.5373G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6779
  bin: 3.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.75e1
  variant carriers: 95
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 3.75e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25417
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 8.25e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.25e1
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 4.75e1
  variant carriers: 165
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 5.25e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 166
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.75e1
  variant carriers: 215
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 4.25e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 9.75e1
  variant carriers: 351
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 16724
  bin: 2.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2060
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 36132
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 2
hgvs: p.Ser1720Ser
num of homozygotes: 24
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

15-72180441-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180441
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180441
    reference: chr 15
allele count: 1
allele frequency: 8.299443937256203e-6
allele num: 120490
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5159C>T
  hgvsp: ENSP00000348349.5:p.Ser1720Leu
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1708C>T
  hgvsp: ENSP00000457945.1:p.Ser570Leu
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5102C>T
  hgvsp: ENSP00000398250.1:p.Ser1701Leu
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5159C>T
  hgvsp: ENSP00000456192.1:p.Ser1720Leu
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5372C>T
  hgvsp: ENSP00000399162.1:p.Ser1791Leu
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.508C>T
  variant of: http://identifiers.org/hgnc/7608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37405
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2002
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser1720Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

15-72180448-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180448
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180448
    reference: chr 15
allele count: 1
allele frequency: 8.320990530712775e-6
allele num: 120178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.501C>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5095C>A
  hgvsp: ENST00000444904.1:c.5095C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5152C>A
  hgvsp: ENST00000356056.5:c.5152C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5365C>A
  hgvsp: ENST00000424560.1:c.5365C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5152C>A
  hgvsp: ENST00000564571.1:c.5152C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1701C>A
  hgvsp: ENST00000561618.1:c.1701C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6680
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36998
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg1718Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

15-72180457-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180457
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180457
    reference: chr 15
allele count: 1
allele frequency: 8.359666282122017e-6
allele num: 119622
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.492A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143A>G
  hgvsp: ENSP00000456192.1:p.Thr1715Ala
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143A>G
  hgvsp: ENSP00000348349.5:p.Thr1715Ala
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356A>G
  hgvsp: ENSP00000399162.1:p.Thr1786Ala
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692A>G
  hgvsp: ENSP00000457945.1:p.Thr565Ala
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086A>G
  hgvsp: ENSP00000398250.1:p.Thr1696Ala
  variant of: http://identifiers.org/hgnc/7608
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35990
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr1715Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

15-72180460-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180460
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180460
    reference: chr 15
allele count: 5
allele frequency: 4.185991996383303e-5
allele num: 119446
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.489C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-3C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-3C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-3C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-3C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-3C>T
  variant of: http://identifiers.org/hgnc/7608
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7084
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2112
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.75e1
  variant carriers: 0
hgvs: c.5143-3C>T
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

15-72180466-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180466
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180466
    reference: chr 15
allele count: 1
allele frequency: 8.403643819960336e-6
allele num: 118996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.483T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-9T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-9T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-9T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-9T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-9T>A
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6621
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1997
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

15-72180472-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180472
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180472
    reference: chr 15
allele count: 1
allele frequency: 8.437394532568342e-6
allele num: 118520
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-15A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.477A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-15A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-15A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-15A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-15A>G
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6434
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6620
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1993
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33345
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

15-72180478-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180478
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180478
    reference: chr 15
allele count: 1
allele frequency: 8.467687305243193e-6
allele num: 118096
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-21T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-21T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-21T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.471T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-21T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-21T>C
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16730
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1170
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2746
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2077
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31567
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

15-72180484-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180484
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180484
    reference: chr 15
allele count: 1351
allele frequency: 1.148243213381156e-2
allele num: 117658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-27A>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-27A>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.465A>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-27A>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-27A>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-27A>C
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15821
  bin: 2.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 5673
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 3.75e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 3.25e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 18437
  bin: 2.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 4.75e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 4.25e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 5.25e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 9.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1492
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2022
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6066
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1177
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7557
  bin: 9.75e1
  variant carriers: 1333
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 13
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

15-72180489-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180489
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180489
    reference: chr 15
allele count: 7
allele frequency: 5.973205904940695e-5
allele num: 117190
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-32C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-32C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.460C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-32C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-32C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-32C>T
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4385
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16199
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2934
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6761
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25947
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2004
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1974
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6488
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2908
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5694
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1955
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1812
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

15-72180490-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180490
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180490
    reference: chr 15
allele count: 4
allele frequency: 3.422723461057964e-5
allele num: 116866
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-33G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-33G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.459G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-33G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-33G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-33G>A
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6950
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15616
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6670
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1953
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25046
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

15-72180491-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180491
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180491
    reference: chr 15
allele count: 32
allele frequency: 2.739069401170952e-4
allele num: 116828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-34G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-34G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.458G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-34G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-34G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-34G>A
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7125
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15082
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 15090
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5538
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6610
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4930
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6504
  bin: 9.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5578
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24375
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/15-72180493-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180493
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180493
    reference: chr 15
allele count: 2
allele frequency: 1.711273872270518e-5
allele num: 116872
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-36T>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.456T>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-36T>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-36T>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-36T>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-36T>G
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6797
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3662
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2946
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 984
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6476
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

15-72180495-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180495
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180495
    reference: chr 15
allele count: 1
allele frequency: 8.580744808649391e-6
allele num: 116540
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.454A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-38A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-38A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-38A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-38A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-38A>G
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6328
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5022
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3500
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3957
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2593
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

15-72180501-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180501
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180501
    reference: chr 15
allele count: 1
allele frequency: 8.645582971659779e-6
allele num: 115666
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-44A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-44A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.448A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-44A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-44A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-44A>G
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10798
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2562
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4410
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4649
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4864
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1920
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1402
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

15-72180502-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180502
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180502
    reference: chr 15
allele count: 7
allele frequency: 6.059556786703601e-5
allele num: 115520
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-45T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-45T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-45T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-45T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.447T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-45T>C
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14056
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7020
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10770
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3936
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4578
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2363
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14745
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4456
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2452
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 1
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

http://identifiers.org/exac.variant/15-72180509-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72180509
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72180509
    reference: chr 15
allele count: 5
allele frequency: 4.395758971744061e-5
allele num: 113746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563071
  gene symbol: MYO9A
  hgvsc: ENST00000563071.1:n.440G>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5143-52G>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1692-52G>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5086-52G>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5143-52G>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5356-52G>T
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6886
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10609
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10768
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14944
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5190
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5443
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7764
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2195
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4516
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6478
  bin: 9.75e1
  variant carriers: 5
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

15-72185289-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185289
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185289
    reference: chr 15
allele count: 1
allele frequency: 1.847063169560399e-4
allele num: 5414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1691+17A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5355+17A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+731A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+731A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5388A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+731A>G
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4087
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

15-72185321-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185321
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185321
    reference: chr 15
allele count: 1
allele frequency: 8.127438231469441e-5
allele num: 12304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5340C>T
  hgvsp: ENST00000424560.1:c.5340C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+699C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1676C>T
  hgvsp: ENST00000561618.1:c.1676C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+699C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5356C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+699C>T
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5255
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His559His
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum

15-72185334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185334
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185334
    reference: chr 15
allele count: 7
allele frequency: 5.226220695833955e-4
allele num: 13394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+686G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+686G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5327G>A
  hgvsp: ENSP00000399162.1:p.Gly1776Asp
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1663G>A
  hgvsp: ENSP00000457945.1:p.Gly555Asp
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5343G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+686G>A
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5375
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1984
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly555Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

15-72185355-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185355
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185355
    reference: chr 15
allele count: 1
allele frequency: 7.163323782234957e-5
allele num: 13960
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1642T>C
  hgvsp: ENSP00000457945.1:p.Leu548Pro
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+665T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5322T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+665T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5306T>C
  hgvsp: ENSP00000399162.1:p.Leu1769Pro
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+665T>C
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6237
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1984
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu548Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

15-72185360-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185360
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185360
    reference: chr 15
allele count: 5
allele frequency: 3.56582513193553e-4
allele num: 14022
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5317T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+660T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1637T>C
  hgvsp: ENST00000561618.1:c.1637T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5301T>C
  hgvsp: ENST00000424560.1:c.5301T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+660T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+660T>C
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2016
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6278
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys546Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

15-72185372-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185372
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185372
    reference: chr 15
allele count: 1
allele frequency: 7.08918190840777e-5
allele num: 14106
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+648A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1625A>G
  hgvsp: ENST00000561618.1:c.1625A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+648A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5289A>G
  hgvsp: ENST00000424560.1:c.5289A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+648A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5305A>G
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6386
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln542Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

15-72185392-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185392
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185392
    reference: chr 15
allele count: 5
allele frequency: 3.518153672952434e-4
allele num: 14212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5285C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1605C>T
  hgvsp: ENSP00000457945.1:p.Pro536Ser
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+628C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+628C>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5269C>T
  hgvsp: ENSP00000399162.1:p.Pro1757Ser
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+628C>T
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2043
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6444
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro536Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

15-72185401-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185401
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185401
    reference: chr 15
allele count: 2
allele frequency: 1.401541695865452e-4
allele num: 14270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+619A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5276A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1596A>G
  hgvsp: ENSP00000457945.1:p.Ile533Val
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+619A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5260A>G
  hgvsp: ENSP00000399162.1:p.Ile1754Val
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+619A>G
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2083
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6484
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile533Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/15-72185407-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185407
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185407
    reference: chr 15
allele count: 10
allele frequency: 6.992029086841001e-4
allele num: 14302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+613G>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+613G>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5254G>T
  hgvsp: ENSP00000399162.1:p.Asp1752Tyr
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1590G>T
  hgvsp: ENSP00000457945.1:p.Asp531Tyr
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5270G>T
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+613G>T
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp531Tyr
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

15-72185420-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185420
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185420
    reference: chr 15
allele count: 2
allele frequency: 1.38792505204719e-4
allele num: 14410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1577G>A
  hgvsp: ENST00000561618.1:c.1577G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5241G>A
  hgvsp: ENST00000424560.1:c.5241G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+600G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5257G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+600G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+600G>A
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2039
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6531
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu526Glu
num of homozygotes: 1
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

15-72185438-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185438
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185438
    reference: chr 15
allele count: 1
allele frequency: 6.87757909215956e-5
allele num: 14540
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+582T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+582T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5223T>C
  hgvsp: ENST00000424560.1:c.5223T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1559T>C
  hgvsp: ENST00000561618.1:c.1559T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5239T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+582T>C
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp520Asp
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ

15-72185472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185472
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185472
    reference: chr 15
allele count: 2
allele frequency: 1.426940639269406e-4
allele num: 14016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1525G>A
  hgvsp: ENSP00000457945.1:p.Arg509His
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+548G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5189G>A
  hgvsp: ENSP00000399162.1:p.Arg1730His
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+548G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+548G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5205G>A
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4850
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5771
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg509His
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

15-72185485-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185485
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185485
    reference: chr 15
allele count: 1
allele frequency: 7.68403258029814e-5
allele num: 13014
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+535A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+535A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1512A>G
  hgvsp: ENSP00000457945.1:p.Met505Val
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5192A>G
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5176A>G
  hgvsp: ENSP00000399162.1:p.Met1726Val
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+535A>G
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4623
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Met505Val
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

15-72185518-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185518
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185518
    reference: chr 15
allele count: 1
allele frequency: 1.009081735620585e-4
allele num: 9910
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5143G>A
  hgvsp: ENSP00000399162.1:p.Val1715Ile
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5159G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1479G>A
  hgvsp: ENSP00000457945.1:p.Val494Ile
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+502G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+502G>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+502G>A
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val494Ile
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP

15-72185973-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185973
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185973
    reference: chr 15
allele count: 1
allele frequency: 8.857082122865444e-6
allele num: 112904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000568781
  gene symbol: MYO9A
  hgvsc: ENST00000568781.1:n.500T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+47T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+47T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5158+47T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1478+47T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+47T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5142+47T>A
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12572
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11535
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8977
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19127
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1170
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3811
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2949
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3543
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4513
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

15-72185977-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185977
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185977
    reference: chr 15
allele count: 3
allele frequency: 2.659480160278004e-5
allele num: 112804
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+43G>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+43G>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5142+43G>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1478+43G>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5158+43G>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000568781
  gene symbol: MYO9A
  hgvsc: ENST00000568781.1:n.496G>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+43G>C
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8654
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20118
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11101
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5266
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3679
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

15-72185986-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185986
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185986
    reference: chr 15
allele count: 1
allele frequency: 8.785030308354564e-6
allele num: 113830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5142+34T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1478+34T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000568781
  gene symbol: MYO9A
  hgvsc: ENST00000568781.1:n.487T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+34T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+34T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5158+34T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+34T>A
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27713
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4256
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

15-72185988-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185988
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185988
    reference: chr 15
allele count: 1
allele frequency: 8.743551630672379e-6
allele num: 114370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5158+32T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5142+32T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000568781
  gene symbol: MYO9A
  hgvsc: ENST00000568781.1:n.485T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+32T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+32T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1478+32T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+32T>C
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10728
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34927
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3371
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3028
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1724
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

15-72185991-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185991
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185991
    reference: chr 15
allele count: 61
allele frequency: 5.312108123171241e-4
allele num: 114832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5142+29T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1478+29T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000568781
  gene symbol: MYO9A
  hgvsc: ENST00000568781.1:n.482T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5158+29T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+29T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+29T>C
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+29T>C
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5169
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 31336
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11256
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4429
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3108
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

15-72185993-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185993
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185993
    reference: chr 15
allele count: 1
allele frequency: 8.666112035496396e-6
allele num: 115392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+27T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5142+27T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+27T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5158+27T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000568781
  gene symbol: MYO9A
  hgvsc: ENST00000568781.1:n.480T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1478+27T>A
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+27T>A
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3402
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2890
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2035
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

15-72185998-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 72185998
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 72185997
    reference: chr 15
allele count: 1
allele frequency: 8.580303056303948e-6
allele num: 116546
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000568781
  gene symbol: MYO9A
  hgvsc: ENST00000568781.1:n.474delT
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000457945
  ensembl transcript: ENST00000561618
  gene symbol: MYO9A
  hgvsc: ENST00000561618.1:c.1478+21delT
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000456192
  ensembl transcript: ENST00000564571
  gene symbol: MYO9A
  hgvsc: ENST00000564571.1:c.5142+21delT
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl transcript: ENST00000563542
  gene symbol: MYO9A
  hgvsc: ENST00000563542.1:n.5158+21delT
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000398250
  ensembl transcript: ENST00000444904
  gene symbol: MYO9A
  hgvsc: ENST00000444904.1:c.5085+21delT
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000348349
  ensembl transcript: ENST00000356056
  gene symbol: MYO9A
  hgvsc: ENST00000356056.5:c.5142+21delT
  variant of: http://identifiers.org/hgnc/7608
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000066933
  ensembl protein: ENSP00000399162
  ensembl transcript: ENST00000424560
  gene symbol: MYO9A
  hgvsc: ENST00000424560.1:c.5142+21delT
  variant of: http://identifiers.org/hgnc/7608
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41392
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3801
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
reference allele: TA

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3517
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9787
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3473
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4672
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9583
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.188e1

FS
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 2.036538e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

VQSLOD
type: SiteQuality
SIO_000300: -3.037e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

MQRankSum
type: SiteQuality
SIO_000300: 2.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.13e-1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4673
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9786
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9583
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3473
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25518
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.26e-1

FS
type: SiteQuality
SIO_000300: 2.668e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 2.036627e6

QD
type: SiteQuality
SIO_000300: 1.353e1

MQRankSum
type: SiteQuality
SIO_000300: -3.71e-1

MQ
type: SiteQuality
SIO_000300: 5.908e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.341e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

GenotypeQuality
all individuals: 25518
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9786
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.908e1

DP
type: SiteQuality
SIO_000300: 2.036627e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.26e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.71e-1

FS
type: SiteQuality
SIO_000300: 2.668e0

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.341e0

QD
type: SiteQuality
SIO_000300: 1.353e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
all individuals: 4674
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9581
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25518
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9785
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3472
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3517
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.833e0

MQRankSum
type: SiteQuality
SIO_000300: -8.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.928e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 8.43e-1

QD
type: SiteQuality
SIO_000300: 7.3e-1

DP
type: SiteQuality
SIO_000300: 2.036673e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3518
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25522
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9787
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3472
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9581
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 7.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.211e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-2

QD
type: SiteQuality
SIO_000300: 1.482e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

DP
type: SiteQuality
SIO_000300: 2.03671e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2267
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

DP
type: SiteQuality
SIO_000300: 2.036722e6

FS
type: SiteQuality
SIO_000300: 9.677e0

QD
type: SiteQuality
SIO_000300: 1.126e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.075e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.713e0

VQSLOD
type: SiteQuality
SIO_000300: -1.279e0

MQ
type: SiteQuality
SIO_000300: 5.894e1

GenotypeQuality
all individuals: 4668
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 86

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1533
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.459010722933241e-4
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 73
allele frequency: 1.093829602325512e-3
allele num: 66738
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.222222222222222e-3
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.042299e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-1

FS
type: SiteQuality
SIO_000300: 5.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.05e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.284e1

VQSLOD
type: SiteQuality
SIO_000300: 3.11e0

MQ
type: SiteQuality
SIO_000300: 5.937e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.429e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.037013e6

InbreedingCoeff
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SIO_000300: 3.6e-3

MQ
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SIO_000300: 5.919e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

FS
type: SiteQuality
SIO_000300: 5.22e-1

QD
type: SiteQuality
SIO_000300: 1.108e1

MQRankSum
type: SiteQuality
SIO_000300: 7.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
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VQSLOD
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SIO_000300: 6.830000000000001e-1

ReadPosRankSum
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QD
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FS
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MQRankSum
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SIO_000300: -6.0e-2

InbreedingCoeff
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SIO_000300: 3.0e-3

ClippingRankSum
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SIO_000300: 5.610000000000001e-1

DP
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SIO_000300: 2.03684e6

BaseQRankSum
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SIO_000300: -1.573e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495190146543199e-5
allele num: 66738
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.45e-1

BaseQRankSum
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VQSLOD
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MQRankSum
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SIO_000300: 8.49e-1

MQ
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SIO_000300: 5.963e1

InbreedingCoeff
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SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

DP
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FS
type: SiteQuality
SIO_000300: 3.99e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996883241428914e-5
allele num: 66736
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.401e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.93e-1

FS
type: SiteQuality
SIO_000300: 1.122e0

MQRankSum
type: SiteQuality
SIO_000300: 6.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

DP
type: SiteQuality
SIO_000300: 2.036854e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 38
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495324862143371e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.55e-1

InbreedingCoeff
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.891e1

MQRankSum
type: SiteQuality
SIO_000300: 6.29e-1

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
SIO_000300: 2.036887e6

FS
type: SiteQuality
SIO_000300: 5.590000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.103e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.47e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.142857142857143e-4
allele num: 9800
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
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DP
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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QD
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SIO_000300: 1.305e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.995e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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FS
type: SiteQuality
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QD
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
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MQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 1.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.87e0

FS
type: SiteQuality
SIO_000300: 3.107e0

QD
type: SiteQuality
SIO_000300: 1.054e1

DP
type: SiteQuality
SIO_000300: 2.036689e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.75e-1

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.186e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e0

MQRankSum
type: SiteQuality
SIO_000300: -1.023e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.843e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.19e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

DP
type: SiteQuality
SIO_000300: 2.036186e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

GenotypeQuality
all individuals: 4670
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 9777
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994844433786943e-5
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.512e0

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

FS
type: SiteQuality
SIO_000300: 2.178e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.81e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 2.036299e6

QD
type: SiteQuality
SIO_000300: 1.115e1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 9557
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.512e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

FS
type: SiteQuality
SIO_000300: 2.178e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 2.036299e6

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

QD
type: SiteQuality
SIO_000300: 1.115e1

GenotypeQuality
all individuals: 2265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 3468
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25462
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variant carriers: 0

GenotypeQuality
all individuals: 3516
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4666
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variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.996462087368453e-5
allele num: 66706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.299e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

MQRankSum
type: SiteQuality
SIO_000300: -3.41e-1

DP
type: SiteQuality
SIO_000300: 2.036548e6

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9542
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 2263
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 3461
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 4662
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1532
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 25440
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.332004851845434e-4
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.785e0

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.681e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

DP
type: SiteQuality
SIO_000300: 2.035326e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

QD
type: SiteQuality
SIO_000300: 1.213e1

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1531
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9537
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variant carriers: 2

GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
all individuals: 4656
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020616452337212e-4
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

QD
type: SiteQuality
SIO_000300: 1.265e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.062e0

MQRankSum
type: SiteQuality
SIO_000300: 6.26e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.64e-1

DP
type: SiteQuality
SIO_000300: 2.034379e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 312
bin: 5.75e1
variant carriers: 57

GenotypeQuality
all individuals: 305
bin: 5.25e1
variant carriers: 67

GenotypeQuality
all individuals: 93
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GenotypeQuality
all individuals: 891
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variant carriers: 16

GenotypeQuality
all individuals: 203
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variant carriers: 28

GenotypeQuality
all individuals: 946
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variant carriers: 199

GenotypeQuality
all individuals: 72
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variant carriers: 17

GenotypeQuality
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variant carriers: 18

GenotypeQuality
all individuals: 2606
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variant carriers: 157

GenotypeQuality
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variant carriers: 66

GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 6179
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variant carriers: 110

GenotypeQuality
all individuals: 3188
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variant carriers: 18

GenotypeQuality
all individuals: 23341
bin: 9.75e1
variant carriers: 21084

Latino
type: Population
allele count: 1157
allele frequency: 1.023350433398196e-1
allele num: 11306
num of homozygotes: 80

East Asian
type: Population
allele count: 1043
allele frequency: 1.250599520383693e-1
allele num: 8340
num of homozygotes: 70

Other
type: Population
allele count: 170
allele frequency: 1.897321428571428e-1
allele num: 896
num of homozygotes: 19

European (Finnish)
type: Population
allele count: 755
allele frequency: 1.154434250764526e-1
allele num: 6540
num of homozygotes: 39

European (Non-Finnish)
type: Population
allele count: 14736
allele frequency: 2.253555589539685e-1
allele num: 65390
num of homozygotes: 1590

African
type: Population
allele count: 4259
allele frequency: 4.39616019818332e-1
allele num: 9688
num of homozygotes: 905

South Asian
type: Population
allele count: 3145
allele frequency: 1.923782725715684e-1
allele num: 16348
num of homozygotes: 334

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.05e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.63e0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.97e0

FS
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.3e-1

DP
type: SiteQuality
SIO_000300: 2.044454e6

QD
type: SiteQuality
SIO_000300: 1.949e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
all individuals: 1187
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5803
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GenotypeQuality
all individuals: 164
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GenotypeQuality
all individuals: 37
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GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 4197
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GenotypeQuality
all individuals: 9766
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GenotypeQuality
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GenotypeQuality
all individuals: 914
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GenotypeQuality
all individuals: 1634
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GenotypeQuality
all individuals: 3130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537515375153751e-5
allele num: 65040
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9588
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6524
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.793e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
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DP
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

QD
type: SiteQuality
SIO_000300: 2.7e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16234
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.928571428571429e-5
allele num: 11200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545308443565336e-5
allele num: 64712
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8210
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9528
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Other
type: Population
allele count: 0
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MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.33e-1

QD
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.845e1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 63494
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9406
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele count: 2
allele frequency: 1.243008079552517e-4
allele num: 16090
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East Asian
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allele frequency: 0.0e0
allele num: 7938
num of homozygotes: 0

Latino
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e0

DP
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SIO_000300: 1.427743e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQ
type: SiteQuality
SIO_000300: 5.989e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.73e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9408
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.574902356053925e-5
allele num: 63496
num of homozygotes: 0

South Asian
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Latino
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allele frequency: 9.066183136899366e-5
allele num: 11030
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
type: Population
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 3.54e-1

QD
type: SiteQuality
SIO_000300: 2.465e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

DP
type: SiteQuality
SIO_000300: 1.424199e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7922
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.328713372571356e-5
allele num: 63204
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9376
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6450
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.524e0

FS
type: SiteQuality
SIO_000300: 2.228e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

QD
type: SiteQuality
SIO_000300: 3.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -7.14e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 7622
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Latino
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allele frequency: 0.0e0
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Other
type: Population
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 61430
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South Asian
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FS
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

Latino
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allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
type: Population
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African
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 4.239854633555421e-4
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ReadPosRankSum
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VQSLOD
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DP
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BaseQRankSum
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MQ
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FS
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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allele frequency: 1.21153380179307e-4
allele num: 16508
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European (Finnish)
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European (Non-Finnish)
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African
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East Asian
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Other
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FS
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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Other
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South Asian
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allele frequency: 6.05766900896535e-5
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African
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allele frequency: 3.059975520195838e-4
allele num: 9804
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele num: 6614
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VQSLOD
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BaseQRankSum
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QD
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DP
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504030802550836e-5
allele num: 66488
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.146e0

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.95e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.191e1

FS
type: SiteQuality
SIO_000300: 5.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

DP
type: SiteQuality
SIO_000300: 1.778147e6

GenotypeQuality
all individuals: 2178
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2097
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6713
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2867
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66456
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.41e0

MQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

FS
type: SiteQuality
SIO_000300: 4.353e0

VQSLOD
type: SiteQuality
SIO_000300: 5.45e-1

DP
type: SiteQuality
SIO_000300: 1.776178e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.56e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.124e0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6389
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1943
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1138
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 8662
bin: 9.75e1
variant carriers: 2218

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2688
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1798
allele frequency: 2.707668212758267e-2
allele num: 66404
num of homozygotes: 21

South Asian
type: Population
allele count: 134
allele frequency: 8.232981076431556e-3
allele num: 16276
num of homozygotes: 1

African
type: Population
allele count: 45
allele frequency: 4.334424966287806e-3
allele num: 10382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 119
allele frequency: 1.807961106046794e-2
allele num: 6582
num of homozygotes: 1

Latino
type: Population
allele count: 132
allele frequency: 1.157285639137296e-2
allele num: 11406
num of homozygotes: 1

Other
type: Population
allele count: 25
allele frequency: 2.765486725663717e-2
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.320185614849188e-4
allele num: 8620
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

FS
type: SiteQuality
SIO_000300: 4.453e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 1.87131e6

VQSLOD
type: SiteQuality
SIO_000300: 2.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.214e1

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2129
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6622
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6705
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16228
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.770391159445712e-5
allele num: 11402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.472e0

QD
type: SiteQuality
SIO_000300: 1.196e1

MQRankSum
type: SiteQuality
SIO_000300: 7.87e-1

DP
type: SiteQuality
SIO_000300: 1.777159e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.68e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.949e0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6622
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2794
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2128
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508477644361311e-5
allele num: 66292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.574e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.297e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.215e1

FS
type: SiteQuality
SIO_000300: 1.41e0

DP
type: SiteQuality
SIO_000300: 1.771489e6

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.63e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.22e-1

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6594
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6620
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2780
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1476
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

QD
type: SiteQuality
SIO_000300: 1.456e1

FS
type: SiteQuality
SIO_000300: 3.004e0

VQSLOD
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

DP
type: SiteQuality
SIO_000300: 1.759786e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.97e0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35729
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6622
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 6568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2774
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.838397522740468e-4
allele num: 10334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66076
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.661e0

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 2.292e0

DP
type: SiteQuality
SIO_000300: 1.756504e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6496
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2769
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34674
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516990291262136e-5
allele num: 65920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

DP
type: SiteQuality
SIO_000300: 1.743826e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

VQSLOD
type: SiteQuality
SIO_000300: 4.2e0

QD
type: SiteQuality
SIO_000300: 1.288e1

GenotypeQuality
all individuals: 2761
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2089
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521745746720638e-5
allele num: 65714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.45e0

MQRankSum
type: SiteQuality
SIO_000300: -5.19e-1

FS
type: SiteQuality
SIO_000300: 2.647e0

VQSLOD
type: SiteQuality
SIO_000300: -1.994e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.04e-1

QD
type: SiteQuality
SIO_000300: 1.799e1

DP
type: SiteQuality
SIO_000300: 1.728237e6

GenotypeQuality
all individuals: 3507
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6618
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15088
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.746588693957115e-5
allele num: 10260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65520
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.895e1

MQRankSum
type: SiteQuality
SIO_000300: -3.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.825e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 7.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.395e0

DP
type: SiteQuality
SIO_000300: 1.70952e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 323
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1904
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1431
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 327
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2621
bin: 7.75e1
variant carriers: 4

African
type: Population
allele count: 282
allele frequency: 2.752830925419758e-2
allele num: 10244
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 247
allele frequency: 3.792997542997543e-2
allele num: 6512
num of homozygotes: 1

Latino
type: Population
allele count: 89
allele frequency: 7.89847355342563e-3
allele num: 11268
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 704
allele frequency: 1.077803974402156e-2
allele num: 65318
num of homozygotes: 6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 17
allele frequency: 1.945080091533181e-2
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 8.036431824270024e-4
allele num: 14932
num of homozygotes: 1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

QD
type: SiteQuality
SIO_000300: 1.642e1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.704778e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.074608535462082e-4
allele num: 65140
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.330000000000001e-1

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.279e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.418e0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

DP
type: SiteQuality
SIO_000300: 1.654858e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

Latino
type: Population
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allele frequency: 1.781895937277263e-4
allele num: 11224
num of homozygotes: 0

African
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allele frequency: 9.823182711198428e-5
allele num: 10180
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.537799101925324e-5
allele num: 65028
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 874
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South Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

DP
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FS
type: SiteQuality
SIO_000300: 8.945e0

MQRankSum
type: SiteQuality
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BaseQRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.888e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64984
num of homozygotes: 0

East Asian
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allele frequency: 3.773584905660377e-3
allele num: 8480
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Latino
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allele frequency: 0.0e0
allele num: 11228
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6506
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South Asian
type: Population
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FS
type: SiteQuality
SIO_000300: 3.031e0

BaseQRankSum
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DP
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SIO_000300: 1.641558e6

QD
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ClippingRankSum
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SIO_000300: -2.41e-1

VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.537799101925324e-5
allele num: 65028
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.912655971479501e-5
allele num: 11220
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14582
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.656e1

MQRankSum
type: SiteQuality
SIO_000300: -6.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.268e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.6e-2

MQ
type: SiteQuality
SIO_000300: 5.932e1

DP
type: SiteQuality
SIO_000300: 1.627806e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541022005794243e-5
allele num: 64892
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.614142e6

VQSLOD
type: SiteQuality
SIO_000300: 3.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.257e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.11e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.897070467141726e-5
allele num: 10104
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64504
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11164
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6492
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East Asian
type: Population
allele count: 0
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allele num: 8404
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QD
type: SiteQuality
SIO_000300: 1.347e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e-1

DP
type: SiteQuality
SIO_000300: 1.580786e6

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

FS
type: SiteQuality
SIO_000300: 4.698e0

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 5.08e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11150
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10084
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European (Non-Finnish)
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allele count: 7
allele frequency: 1.086619062402981e-4
allele num: 64420
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14114
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 9.97e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

South Asian
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allele frequency: 3.666764447051921e-4
allele num: 13636
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11048
num of homozygotes: 0

African
type: Population
allele count: 0
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allele num: 9948
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Other
type: Population
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allele num: 850
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63558
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MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
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DP
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ReadPosRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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African
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allele frequency: 0.0e0
allele num: 320
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Latino
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BaseQRankSum
type: SiteQuality
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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MQ
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ClippingRankSum
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ReadPosRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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allele frequency: 5.10204081632653e-3
allele num: 196
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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BaseQRankSum
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QD
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MQ
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 9.75e1
variant carriers: 7

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 9.867493656611221e-4
allele num: 7094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.981e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

DP
type: SiteQuality
SIO_000300: 1.58592e5

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

FS
type: SiteQuality
SIO_000300: 2.677e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.42e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

GenotypeQuality
all individuals: 306
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 428
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variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3752
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.334400854016547e-4
allele num: 7494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.45e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

QD
type: SiteQuality
SIO_000300: 8.109999999999999e0

DP
type: SiteQuality
SIO_000300: 1.66297e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 5

GenotypeQuality
all individuals: 6
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1594
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 8.960573476702509e-3
allele num: 558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3772
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7532
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.291e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.49e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.14e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.296e0

QD
type: SiteQuality
SIO_000300: 1.171e1

VQSLOD
type: SiteQuality
SIO_000300: 5.36e-1

DP
type: SiteQuality
SIO_000300: 1.67499e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3808
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.319261213720317e-4
allele num: 7580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.139e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

QD
type: SiteQuality
SIO_000300: 1.274e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.899999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.69429e5

MQRankSum
type: SiteQuality
SIO_000300: 6.55e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.64e-2

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 9.75e1
variant carriers: 5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.568575932737783e-4
allele num: 7612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.37e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.167e0

FS
type: SiteQuality
SIO_000300: 4.883e0

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

QD
type: SiteQuality
SIO_000300: 9.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.35e-1

DP
type: SiteQuality
SIO_000300: 1.72061e5

GenotypeQuality
all individuals: 167
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 442
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3922
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 1.01010101010101e-2
allele num: 198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.92e-1

FS
type: SiteQuality
SIO_000300: 5.885e0

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 1.73488e5

QD
type: SiteQuality
SIO_000300: 1.046e1

MQRankSum
type: SiteQuality
SIO_000300: 2.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.25e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.748e0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 2120
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GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 1.313370107696349e-3
allele num: 7614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.74429e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.14e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

MQ
type: SiteQuality
SIO_000300: 5.921e1

FS
type: SiteQuality
SIO_000300: 5.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-2

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.624671916010499e-4
allele num: 7620
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4038
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.049e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.91e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 15
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.312335958005249e-4
allele num: 7620
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4154
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.96e-2

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 2
allele frequency: 2.75178866263071e-4
allele num: 7268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 1.516530178950561e-4
allele num: 6594
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3706
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 170
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.50572e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.738e-1

QD
type: SiteQuality
SIO_000300: 1.626e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.203613926840018e-4
allele num: 4538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2824
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

QD
type: SiteQuality
SIO_000300: 3.41e0

VQSLOD
type: SiteQuality
SIO_000300: -2.169e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.268e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

FS
type: SiteQuality
SIO_000300: 1.4876e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.42e-2

DP
type: SiteQuality
SIO_000300: 1.08884e5

GenotypeQuality
all individuals: 282
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7764
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10958
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.625540492213661e-5
allele num: 61518
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.095e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.416232e6

GenotypeQuality
all individuals: 4430
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23682
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1175
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variant carriers: 0

GenotypeQuality
all individuals: 2594
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61486
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.013376570733685e-4
allele num: 9868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.293493726555426e-4
allele num: 15462
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 5.589e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.99e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

QD
type: SiteQuality
SIO_000300: 1.468e1

MQRankSum
type: SiteQuality
SIO_000300: -7.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.91e-1

DP
type: SiteQuality
SIO_000300: 1.440878e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

GenotypeQuality
all individuals: 732
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3215
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3560
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
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variant carriers: 0

GenotypeQuality
all individuals: 1944
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variant carriers: 0

GenotypeQuality
all individuals: 335
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variant carriers: 0

GenotypeQuality
all individuals: 3512
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3805
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variant carriers: 1

GenotypeQuality
all individuals: 31953
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.061254077564335e-5
allele num: 11036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62092
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.84e-1

FS
type: SiteQuality
SIO_000300: 5.229e0

VQSLOD
type: SiteQuality
SIO_000300: -1.558e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.84e-1

DP
type: SiteQuality
SIO_000300: 1.508004e6

QD
type: SiteQuality
SIO_000300: 1.988e1

GenotypeQuality
all individuals: 156
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3813
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11076
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.601947968729976e-5
allele num: 62424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9950
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.391e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

DP
type: SiteQuality
SIO_000300: 1.528539e6

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: -2.333e0

QD
type: SiteQuality
SIO_000300: 2.229e1

GenotypeQuality
all individuals: 2435
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 772
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1178
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37144
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3858
bin: 9.75e1
variant carriers: 61

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7902
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.305170239596469e-4
allele num: 11102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 5.099439061703213e-4
allele num: 62752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.547508511296812e-4
allele num: 6462
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.0e-4
allele num: 10000
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.206962266548088e-3
allele num: 15742
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.146788990825688e-3
allele num: 872
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.95e0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.96e-2

DP
type: SiteQuality
SIO_000300: 1.554889e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

QD
type: SiteQuality
SIO_000300: 1.598e1

GenotypeQuality
all individuals: 1187
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3809
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GenotypeQuality
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GenotypeQuality
all individuals: 1265
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10034
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.584836286411614e-5
allele num: 63098
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15828
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.94e1

VQSLOD
type: SiteQuality
SIO_000300: -3.978e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.528e1

DP
type: SiteQuality
SIO_000300: 1.569153e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

GenotypeQuality
all individuals: 885
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variant carriers: 0

GenotypeQuality
all individuals: 4698
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1171
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GenotypeQuality
all individuals: 848
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variant carriers: 0

GenotypeQuality
all individuals: 292
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GenotypeQuality
all individuals: 333
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variant carriers: 0

GenotypeQuality
all individuals: 308
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GenotypeQuality
all individuals: 325
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15920
num of homozygotes: 0