11-45936155-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936155
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936155
    reference: chr 11
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.229A>G
  hgvsp: ENSP00000433045.1:p.Thr77Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.312A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.256A>G
  hgvsp: ENSP00000434654.1:p.Thr86Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.256A>G
  hgvsp: ENSP00000431309.1:p.Thr86Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.541A>G
  hgvsp: ENSP00000368024.5:p.Thr181Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.541A>G
  hgvsp: ENSP00000241041.3:p.Thr181Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.157A>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1461
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3392
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr181Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

11-45936167-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936167
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936167
    reference: chr 11
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.244A>G
  hgvsp: ENSP00000434654.1:p.Thr82Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.244A>G
  hgvsp: ENSP00000431309.1:p.Thr82Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.145A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.217A>G
  hgvsp: ENSP00000433045.1:p.Thr73Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.529A>G
  hgvsp: ENSP00000368024.5:p.Thr177Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.529A>G
  hgvsp: ENSP00000241041.3:p.Thr177Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.300A>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7825
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43614
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr177Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-45936169-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936169
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936169
    reference: chr 11
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.143G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.242G>A
  hgvsp: ENSP00000431309.1:p.Arg81Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.527G>A
  hgvsp: ENSP00000368024.5:p.Arg176Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.527G>A
  hgvsp: ENSP00000241041.3:p.Arg176Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.242G>A
  hgvsp: ENSP00000434654.1:p.Arg81Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.298G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.215G>A
  hgvsp: ENSP00000433045.1:p.Arg72Gln
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7825
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg176Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP

11-45936187-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936187
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936187
    reference: chr 11
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.509G>A
  hgvsp: ENSP00000368024.5:p.Arg170Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.224G>A
  hgvsp: ENSP00000431309.1:p.Arg75Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.197G>A
  hgvsp: ENSP00000433045.1:p.Arg66Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.224G>A
  hgvsp: ENSP00000434654.1:p.Arg75Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.509G>A
  hgvsp: ENSP00000241041.3:p.Arg170Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.125G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.280G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43612
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg170Gln
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

11-45936197-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936197
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936197
    reference: chr 11
allele count: 7
allele frequency: 5.766632616074076e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.115G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.187G>A
  hgvsp: ENSP00000433045.1:p.Val63Met
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.214G>A
  hgvsp: ENSP00000434654.1:p.Val72Met
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.499G>A
  hgvsp: ENSP00000368024.5:p.Val167Met
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.214G>A
  hgvsp: ENSP00000431309.1:p.Val72Met
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.499G>A
  hgvsp: ENSP00000241041.3:p.Val167Met
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.270G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6787
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2391
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val167Met
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-45936203-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936203
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936203
    reference: chr 11
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.109T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.493T>C
  hgvsp: ENSP00000241041.3:p.Ser165Pro
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.264T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.181T>C
  hgvsp: ENSP00000433045.1:p.Ser61Pro
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.493T>C
  hgvsp: ENSP00000368024.5:p.Ser165Pro
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.208T>C
  hgvsp: ENSP00000434654.1:p.Ser70Pro
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.208T>C
  hgvsp: ENSP00000431309.1:p.Ser70Pro
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6787
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43614
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser165Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

11-45936204-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936204
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936204
    reference: chr 11
allele count: 3
allele frequency: 2.471413978317461e-5
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.180G>C
  hgvsp: ENSP00000433045.1:p.Gln60His
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.492G>C
  hgvsp: ENSP00000241041.3:p.Gln164His
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.263G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.492G>C
  hgvsp: ENSP00000368024.5:p.Gln164His
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.108G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.207G>C
  hgvsp: ENSP00000431309.1:p.Gln69His
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.207G>C
  hgvsp: ENSP00000434654.1:p.Gln69His
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7772
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2392
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43612
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln164His
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

11-45936210-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936210
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936210
    reference: chr 11
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.257T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.486T>C
  hgvsp: ENST00000241041.3:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.201T>C
  hgvsp: ENST00000532681.1:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.201T>C
  hgvsp: ENST00000525192.1:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.102T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.486T>C
  hgvsp: ENST00000378750.5:c.486T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.174T>C
  hgvsp: ENST00000533151.1:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2722
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.His162His
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-45936211-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936211
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936211
    reference: chr 11
allele count: 3
allele frequency: 2.471454698235381e-5
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.101A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.200A>G
  hgvsp: ENSP00000431309.1:p.His67Arg
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.485A>G
  hgvsp: ENSP00000241041.3:p.His162Arg
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.485A>G
  hgvsp: ENSP00000368024.5:p.His162Arg
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.256A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.200A>G
  hgvsp: ENSP00000434654.1:p.His67Arg
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.173A>G
  hgvsp: ENSP00000433045.1:p.His58Arg
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5053
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6785
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His162Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

11-45936221-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936221
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936221
    reference: chr 11
allele count: 5
allele frequency: 4.119226903494752e-5
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.190C>T
  hgvsp: ENSP00000434654.1:p.Pro64Ser
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.475C>T
  hgvsp: ENSP00000241041.3:p.Pro159Ser
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.475C>T
  hgvsp: ENSP00000368024.5:p.Pro159Ser
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.190C>T
  hgvsp: ENSP00000431309.1:p.Pro64Ser
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.163C>T
  hgvsp: ENSP00000433045.1:p.Pro55Ser
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.91C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.246C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6785
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3112
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3429
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro159Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum

11-45936230-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936230
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936230
    reference: chr 11
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.181G>C
  hgvsp: ENSP00000431309.1:p.Asp61His
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.181G>C
  hgvsp: ENSP00000434654.1:p.Asp61His
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.466G>C
  hgvsp: ENSP00000241041.3:p.Asp156His
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.154G>C
  hgvsp: ENSP00000433045.1:p.Asp52His
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.466G>C
  hgvsp: ENSP00000368024.5:p.Asp156His
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.237G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.82G>C
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6785
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2141
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2721
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp156His
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

11-45936235-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936235
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936235
    reference: chr 11
allele count: 10
allele frequency: 8.238453806989504e-5
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.461A>G
  hgvsp: ENSP00000241041.3:p.Asp154Gly
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.232A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149A>G
  hgvsp: ENSP00000433045.1:p.Asp50Gly
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.77A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.176A>G
  hgvsp: ENSP00000434654.1:p.Asp59Gly
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.461A>G
  hgvsp: ENSP00000368024.5:p.Asp154Gly
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.176A>G
  hgvsp: ENSP00000431309.1:p.Asp59Gly
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6785
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7772
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5432
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2388
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp154Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

11-45936244-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936244
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936244
    reference: chr 11
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.77-9C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.461-9C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.176-9C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.176-9C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-9C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.232-9C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.461-9C>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6790
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2383
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43611
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3112
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

11-45936256-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936256
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936256
    reference: chr 11
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.232-21C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.77-21C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.176-21C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-21C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.461-21C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.461-21C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.176-21C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2718
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

11-45936262-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936262
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936262
    reference: chr 11
allele count: 11
allele frequency: 9.064390131351253e-5
allele num: 121354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.232-27G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.77-27G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-27G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.176-27G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.176-27G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.461-27G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.461-27G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2659
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43609
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2080
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

11-45936276-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936276
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936276
    reference: chr 11
allele count: 4
allele frequency: 3.29733740004946e-5
allele num: 121310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-41A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.176-41A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.77-41A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.461-41A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.176-41A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.461-41A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.232-41A>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7770
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

11-45936276-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936276
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936276
    reference: chr 11
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-41A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.232-41A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.77-41A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.461-41A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.176-41A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.176-41A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.461-41A>C
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3783
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1751
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3111
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

11-45936279-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936279
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936279
    reference: chr 11
allele count: 3
allele frequency: 2.472880741204788e-5
allele num: 121316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.461-44A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.176-44A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.176-44A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.232-44A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.77-44A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.461-44A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-44A>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7821
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2357
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2703
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43609
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

11-45936285-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936285
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936285
    reference: chr 11
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.176-50G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-50G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.461-50G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.176-50G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.461-50G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.77-50G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.232-50G>C
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6782
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5438
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2268
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1922
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2340
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

11-45936285-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936285
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936285
    reference: chr 11
allele count: 182
allele frequency: 1.500758625239132e-3
allele num: 121272
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.461-50G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-50G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.176-50G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.77-50G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.232-50G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.176-50G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.461-50G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5438
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7743
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6782
  bin: 5.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 7806
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 6.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43638
  bin: 9.75e1
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2340
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

11-45936286-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936286
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936286
    reference: chr 11
allele count: 8
allele frequency: 6.596958801992281e-5
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.232-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.77-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.461-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.176-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.176-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.461-51C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7805
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4849
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2697
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3110
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

11-45936287-G-GTTCTGGACAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936287
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936297
    reference: chr 11
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: GTTCTGGACAC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 7737
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3787
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/11-45936979-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936979
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936979
    reference: chr 11
allele count: 2
allele frequency: 1.655958137378287e-5
allele num: 120776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.231+40G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.175+40G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-744G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.175+40G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.76+40G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.460+40G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.460+40G>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9178
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2798
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

11-45936987-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936987
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936987
    reference: chr 11
allele count: 1
allele frequency: 8.274720728175424e-6
allele num: 120850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.76+32T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-752T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.175+32T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.460+32T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.460+32T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.231+32T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.175+32T>C
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2600
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2856
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

11-45936992-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936992
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936992
    reference: chr 11
allele count: 1
allele frequency: 8.272256506129742e-6
allele num: 120886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.460+27C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.76+27C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-757C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.231+27C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.175+27C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.175+27C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.460+27C>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4436
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7529
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29605
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4164
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

11-45936999-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45936999
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45936999
    reference: chr 11
allele count: 1
allele frequency: 8.268836409340477e-6
allele num: 120936
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.460+20C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.175+20C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-764C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.175+20C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.231+20C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.460+20C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.76+20C>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9247
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5665
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3924
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

11-45937020-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937020
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937020
    reference: chr 11
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-785G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.459G>A
  hgvsp: ENST00000378750.5:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.230G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*412G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.459G>A
  hgvsp: ENST00000241041.3:c.459G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.174G>A
  hgvsp: ENST00000525192.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.174G>A
  hgvsp: ENST00000532681.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.75G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7969
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29623
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2621
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
hgvs: c.459G>A
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

11-45937021-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937021
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937021
    reference: chr 11
allele count: 4
allele frequency: 3.302673514209752e-5
allele num: 121114
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.74C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.229C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.173C>T
  hgvsp: ENSP00000434654.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.458C>T
  hgvsp: ENSP00000368024.5:p.Pro153Leu
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.458C>T
  hgvsp: ENSP00000241041.3:p.Pro153Leu
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*411C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.173C>T
  hgvsp: ENSP00000431309.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-786C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4574
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29625
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4218
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro153Leu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

11-45937024-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937024
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937024
    reference: chr 11
allele count: 1
allele frequency: 8.254775387561705e-6
allele num: 121142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*408C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-789C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.226C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.455C>T
  hgvsp: ENSP00000241041.3:p.Pro152Leu
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.170C>T
  hgvsp: ENSP00000434654.1:p.Pro57Leu
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.71C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.455C>T
  hgvsp: ENSP00000368024.5:p.Pro152Leu
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.170C>T
  hgvsp: ENSP00000431309.1:p.Pro57Leu
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5665
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9282
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2954
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3931
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro152Leu
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/11-45937031-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937031
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937031
    reference: chr 11
allele count: 2
allele frequency: 1.650382888830209e-5
allele num: 121184
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.448G>T
  hgvsp: ENSP00000241041.3:p.Ala150Ser
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*401G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.219G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.448G>T
  hgvsp: ENSP00000368024.5:p.Ala150Ser
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.163G>T
  hgvsp: ENSP00000431309.1:p.Ala55Ser
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.64G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-796G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.163G>T
  hgvsp: ENSP00000434654.1:p.Ala55Ser
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4230
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala150Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

11-45937043-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937043
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937043
    reference: chr 11
allele count: 1
allele frequency: 8.249463784853985e-6
allele num: 121220
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.436A>G
  hgvsp: ENSP00000241041.3:p.Arg146Gly
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.151A>G
  hgvsp: ENSP00000434654.1:p.Arg51Gly
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*389A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.151A>G
  hgvsp: ENSP00000431309.1:p.Arg51Gly
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.436A>G
  hgvsp: ENSP00000368024.5:p.Arg146Gly
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-808A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.52A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.207A>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9291
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29629
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg146Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

11-45937047-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937047
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937047
    reference: chr 11
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-812G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*331G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*385G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.48G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.432G>A
  hgvsp: ENST00000241041.3:c.432G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.147G>A
  hgvsp: ENST00000525192.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.432G>A
  hgvsp: ENST00000378750.5:c.432G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.203G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.147G>A
  hgvsp: ENST00000532681.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4152
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4624
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu144Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

11-45937055-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937055
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937055
    reference: chr 11
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.139G>A
  hgvsp: ENSP00000431309.1:p.Val47Ile
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.40G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.424G>A
  hgvsp: ENSP00000241041.3:p.Val142Ile
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.424G>A
  hgvsp: ENSP00000368024.5:p.Val142Ile
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.139G>A
  hgvsp: ENSP00000434654.1:p.Val47Ile
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*323G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-820G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*377G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.195G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2960
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Val142Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum

11-45937056-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937056
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937056
    reference: chr 11
allele count: 3
allele frequency: 2.474349246148263e-5
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.138C>T
  hgvsp: ENST00000532681.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.138C>T
  hgvsp: ENST00000525192.1:c.138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*322C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.194C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.423C>T
  hgvsp: ENST00000378750.5:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-821C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.423C>T
  hgvsp: ENST00000241041.3:c.423C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*376C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.39C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4631
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4153
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ile141Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

11-45937058-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937058
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937058
    reference: chr 11
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.421A>G
  hgvsp: ENSP00000241041.3:p.Ile141Val
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.136A>G
  hgvsp: ENSP00000431309.1:p.Ile46Val
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.192A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*320A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.421A>G
  hgvsp: ENSP00000368024.5:p.Ile141Val
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.136A>G
  hgvsp: ENSP00000434654.1:p.Ile46Val
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*374A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.37A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-823A>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2630
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile141Val
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

11-45937060-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937060
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937060
    reference: chr 11
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.35C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.190C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.134C>G
  hgvsp: ENSP00000434654.1:p.Pro45Arg
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*372C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.134C>G
  hgvsp: ENSP00000431309.1:p.Pro45Arg
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*318C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.419C>G
  hgvsp: ENSP00000241041.3:p.Pro140Arg
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-825C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.419C>G
  hgvsp: ENSP00000368024.5:p.Pro140Arg
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4151
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro140Arg
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

11-45937061-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937061
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937061
    reference: chr 11
allele count: 2
allele frequency: 1.649185302460584e-5
allele num: 121272
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*371C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*317C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.133C>G
  hgvsp: ENSP00000434654.1:p.Pro45Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.418C>G
  hgvsp: ENSP00000241041.3:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.34C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.418C>G
  hgvsp: ENSP00000368024.5:p.Pro140Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.133C>G
  hgvsp: ENSP00000431309.1:p.Pro45Ala
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.189C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-826C>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9449
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2628
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4151
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro140Ala
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-45937074-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937074
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937074
    reference: chr 11
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*304C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000527371
  gene symbol: PEX16
  hgvsc: ENST00000527371.1:n.21C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.120C>G
  hgvsp: ENST00000525192.1:c.120C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*358C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.176C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.120C>G
  hgvsp: ENST00000532681.1:c.120C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.405C>G
  hgvsp: ENST00000241041.3:c.405C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.405C>G
  hgvsp: ENST00000378750.5:c.405C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-839C>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29630
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2632
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu135Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-45937100-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937100
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937100
    reference: chr 11
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.94C>T
  hgvsp: ENST00000525192.1:c.94C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*332C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.150C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.379C>T
  hgvsp: ENST00000241041.3:c.379C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.379C>T
  hgvsp: ENST00000378750.5:c.379C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-865C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*278C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.94C>T
  hgvsp: ENST00000532681.1:c.94C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7505
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4152
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4253
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu127Leu
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

11-45937108-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937108
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937108
    reference: chr 11
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.371G>A
  hgvsp: ENSP00000241041.3:p.Arg124Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.86G>A
  hgvsp: ENSP00000434654.1:p.Arg29Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.142G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.371G>A
  hgvsp: ENSP00000368024.5:p.Arg124Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.86G>A
  hgvsp: ENSP00000431309.1:p.Arg29Gln
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*324G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*270G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-873G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3940
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7946
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29630
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg124Gln
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

11-45937109-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937109
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937109
    reference: chr 11
allele count: 2
allele frequency: 1.649675014022238e-5
allele num: 121236
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*323C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.85C>T
  hgvsp: ENSP00000431309.1:p.Arg29Trp
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-874C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.141C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.85C>T
  hgvsp: ENSP00000434654.1:p.Arg29Trp
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.370C>T
  hgvsp: ENSP00000368024.5:p.Arg124Trp
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.370C>T
  hgvsp: ENSP00000241041.3:p.Arg124Trp
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*269C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10631
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9314
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7992
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg124Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

11-45937109-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937109
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937109
    reference: chr 11
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*269C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.370C>A
  hgvsp: ENST00000241041.3:c.370C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.85C>A
  hgvsp: ENST00000532681.1:c.85C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.141C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*323C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-874C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.370C>A
  hgvsp: ENST00000378750.5:c.370C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.85C>A
  hgvsp: ENST00000525192.1:c.85C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7992
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg124Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

11-45937124-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937124
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937124
    reference: chr 11
allele count: 1
allele frequency: 8.251778258214646e-6
allele num: 121186
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-889C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-5C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-5C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-5C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-5C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-5C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-5C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-5C>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7511
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.25e1
  variant carriers: 0
hgvs: c.360-5C>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

11-45937126-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937126
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937126
    reference: chr 11
allele count: 4
allele frequency: 3.301256127956687e-5
allele num: 121166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-7G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-7G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-7G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-7G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-7G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-7G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-7G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-891G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9445
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10592
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4586
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7566
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4160
  bin: 8.25e1
  variant carriers: 0
hgvs: c.360-7G>A
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

11-45937130-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937130
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937130
    reference: chr 11
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-895C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-11C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-11C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-11C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-11C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-11C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-11C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-11C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9403
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7573
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP

11-45937132-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937132
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937132
    reference: chr 11
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-13C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-897C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-13C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-13C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-13C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-13C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-13C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-13C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9334
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4588
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2962
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7468
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

11-45937137-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937137
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937137
    reference: chr 11
allele count: 8
allele frequency: 6.602730228949671e-5
allele num: 121162
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-18A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-18A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-18A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-18A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-18A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-18A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-18A>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-902A>C
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7517
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3915
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9346
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3944
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7583
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

11-45937141-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937141
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937141
    reference: chr 11
allele count: 8
allele frequency: 6.604038369462926e-5
allele num: 121138
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-22C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-22C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-22C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-22C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-22C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-906C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-22C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-22C>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9358
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7526
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

11-45937143-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937143
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937143
    reference: chr 11
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-24A>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-908A>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-24A>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-24A>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-24A>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-24A>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-24A>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-24A>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9359
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4181
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3943
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-45937143-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937143
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937143
    reference: chr 11
allele count: 2
allele frequency: 1.650927821435647e-5
allele num: 121144
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-24A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-24A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-24A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-908A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-24A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-24A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-24A>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-24A>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10609
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9359
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29651
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2974
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

11-45937156-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937156
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937156
    reference: chr 11
allele count: 1
allele frequency: 8.25722920416825e-6
allele num: 121106
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-37C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-37C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-37C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-37C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-37C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-37C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-921C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-37C>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5672
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4198
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4263
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

11-45937162-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937162
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937162
    reference: chr 11
allele count: 4
allele frequency: 3.30310987795009e-5
allele num: 121098
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-43G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-43G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-927G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-43G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-43G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-43G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-43G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-43G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3926
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10725
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6968
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2661
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

11-45937163-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937163
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937163
    reference: chr 11
allele count: 4
allele frequency: 3.302946228035408e-5
allele num: 121104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-44C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-44C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-928C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-44C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-44C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-44C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-44C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-44C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2666
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2999
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4326
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7087
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

11-45937166-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937166
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937166
    reference: chr 11
allele count: 11
allele frequency: 9.083852213982526e-5
allele num: 121094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-47C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-47C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-47C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-931C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-47C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-47C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-47C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-47C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10755
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5698
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7617
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3001
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29725
  bin: 9.75e1
  variant carriers: 11
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

11-45937167-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937167
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937167
    reference: chr 11
allele count: 3
allele frequency: 2.476964232636481e-5
allele num: 121116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-48C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-932C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-48C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-48C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-48C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-48C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-48C>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-48C>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3982
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4358
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/11-45937169-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937169
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937169
    reference: chr 11
allele count: 1
allele frequency: 8.255865792645674e-6
allele num: 121126
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-50T>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-50T>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-50T>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-50T>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-50T>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-50T>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-50T>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-934T>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29749
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3988
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6941
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3014
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

11-45937170-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937170
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937170
    reference: chr 11
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*259-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.75-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.360-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.75-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.360-51C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-935C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*313-51C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9482
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6815
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3990
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

11-45937205-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937205
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937205
    reference: chr 11
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+49G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-970G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-86G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+49G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+49G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+49G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+49G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+49G>C
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25841
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54838
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-45937213-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937213
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937213
    reference: chr 11
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+41G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+41G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-978G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+41G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+41G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-94G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+41G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+41G>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25842
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

11-45937213-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937213
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937213
    reference: chr 11
allele count: 1
allele frequency: 8.248239000973292e-6
allele num: 121238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+41G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+41G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-94G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+41G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-978G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+41G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+41G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+41G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25842
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

11-45937214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937214
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937214
    reference: chr 11
allele count: 199
allele frequency: 1.640777019227598e-3
allele num: 121284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-979C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+40C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-95C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+40C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+40C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+40C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+40C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+40C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3220
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 25861
  bin: 9.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 9.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 3
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

11-45937222-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937222
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937222
    reference: chr 11
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+32G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+32G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+32G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+32G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-987G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-103G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+32G>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+32G>C
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25864
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2740
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-45937227-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937227
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937227
    reference: chr 11
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+27T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+27T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+27T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-992T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+27T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+27T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-108T>C
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+27T>C
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2740
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25864
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ

11-45937229-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937229
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937229
    reference: chr 11
allele count: 4
allele frequency: 3.296848213108268e-5
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+25C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+25C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-994C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+25C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-110C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+25C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+25C>G
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+25C>G
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25867
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2740
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54901
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-45937240-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937240
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937240
    reference: chr 11
allele count: 1
allele frequency: 8.240897928238261e-6
allele num: 121346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-1005G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+14G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+14G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-121G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+14G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+14G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+14G>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+14G>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3614
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25893
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-45937240-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937240
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937239
    reference: chr 11
allele count: 59
allele frequency: 4.862129777660574e-4
allele num: 121346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+13delT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+13delT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+13delT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-1006delT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+13delT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+13delT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-122delT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+13delT
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25893
  bin: 9.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2253
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3614
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54925
  bin: 9.75e1
  variant carriers: 58
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 1
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: CA
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-45937246-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937246
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937247
    reference: chr 11
allele count: 3
allele frequency: 2.472269378471478e-5
allele num: 121346
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+7dupT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-1012dupT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-128dupT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+7dupT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+7dupT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+7dupT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+7dupT
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+7dupT
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2255
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25894
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 7.25e1
  variant carriers: 0
hgvs: c.359+7dupT
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

11-45937253-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937253
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937253
    reference: chr 11
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*312+1G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.74+1G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.359+1G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-1018G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.359+1G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.74+1G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*258+1G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-134G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25895
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3930
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54940
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
hgvs: c.359+1G>A
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

11-45937267-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937267
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937267
    reference: chr 11
allele count: 121390
allele frequency: 1.0e0
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*299G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-1032G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000432486
  ensembl transcript: ENST00000529030
  gene symbol: PEX16
  hgvsc: ENST00000529030.1:c.*331G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.61G>A
  hgvsp: ENSP00000431309.1:p.Val21Ile
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-148G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.346G>A
  hgvsp: ENSP00000241041.3:p.Val116Ile
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.61G>A
  hgvsp: ENSP00000434654.1:p.Val21Ile
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*245G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.346G>A
  hgvsp: ENSP00000368024.5:p.Val116Ile
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 3.25e1
  variant carriers: 207
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 6.75e1
  variant carriers: 926
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.75e1
  variant carriers: 796
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 3.75e1
  variant carriers: 358
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 8.25e1
  variant carriers: 750
genotype depth: GenotypeDepth
  all individuals: 51193
  bin: 9.75e1
  variant carriers: 51193
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 8.75e1
  variant carriers: 781
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 5.25e1
  variant carriers: 752
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 6.25e1
  variant carriers: 915
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 9.25e1
  variant carriers: 873
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.75e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 557
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.75e1
  variant carriers: 650
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 5.75e1
  variant carriers: 850
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 7.25e1
  variant carriers: 882
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 6.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 7
hgvs: p.Val116Ile
num of homozygotes: 60695
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

11-45937268-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937268
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937268
    reference: chr 11
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.60C>T
  hgvsp: ENST00000525192.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-1033C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.345C>T
  hgvsp: ENST00000241041.3:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.345C>T
  hgvsp: ENST00000378750.5:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*244C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*298C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000432486
  ensembl transcript: ENST00000529030
  gene symbol: PEX16
  hgvsc: ENST00000529030.1:c.*330C>T
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.60C>T
  hgvsp: ENST00000532681.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-149C>T
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26482
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3746
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu115Leu
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

11-45937273-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45937273
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 45937273
    reference: chr 11
allele count: 14
allele frequency: 1.153573606235889e-4
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431309
  ensembl transcript: ENST00000525192
  gene symbol: PEX16
  hgvsc: ENST00000525192.1:c.55G>A
  hgvsp: ENSP00000431309.1:p.Ala19Thr
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000241041
  ensembl transcript: ENST00000241041
  gene symbol: PEX16
  hgvsc: ENST00000241041.3:c.340G>A
  hgvsp: ENSP00000241041.3:p.Ala114Thr
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl transcript: ENST00000532554
  gene symbol: PEX16
  hgvsc: ENST00000532554.1:n.131-154G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000433045
  ensembl transcript: ENST00000533151
  gene symbol: PEX16
  hgvsc: ENST00000533151.1:c.149-1038G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434654
  ensembl transcript: ENST00000532681
  gene symbol: PEX16
  hgvsc: ENST00000532681.1:c.55G>A
  hgvsp: ENSP00000434654.1:p.Ala19Thr
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000431132
  ensembl transcript: ENST00000525229
  gene symbol: PEX16
  hgvsc: ENST00000525229.1:c.*293G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000368024
  ensembl transcript: ENST00000378750
  gene symbol: PEX16
  hgvsc: ENST00000378750.5:c.340G>A
  hgvsp: ENSP00000368024.5:p.Ala114Thr
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000432486
  ensembl transcript: ENST00000529030
  gene symbol: PEX16
  hgvsc: ENST00000529030.1:c.*325G>A
  variant of: http://identifiers.org/hgnc/8857
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000121680
  ensembl protein: ENSP00000434060
  ensembl transcript: ENST00000528674
  gene symbol: PEX16
  hgvsc: ENST00000528674.1:c.*239G>A
  variant of: http://identifiers.org/hgnc/8857
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3746
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26481
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3176
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala114Thr
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 2725
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2389
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43613
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3113
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.094e0

VQSLOD
type: SiteQuality
SIO_000300: 6.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.62e-1

MQ
type: SiteQuality
SIO_000300: 5.912e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

QD
type: SiteQuality
SIO_000300: 1.203e1

DP
type: SiteQuality
SIO_000300: 3.226752e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: 5.84e0

FS
type: SiteQuality
SIO_000300: 3.206e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.03e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66706
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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African
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allele frequency: 0.0e0
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Other
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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SIO_000300: 2.1e-2

MQRankSum
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QD
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InbreedingCoeff
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.752e0

DP
type: SiteQuality
SIO_000300: 3.227099e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 906
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Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

DP
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQ
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ReadPosRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

FS
type: SiteQuality
SIO_000300: 8.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.41e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 5.994844433786943e-5
allele num: 66724
num of homozygotes: 0

South Asian
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allele num: 16512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.744e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.72e-1

QD
type: SiteQuality
SIO_000300: 1.247e1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

MQ
type: SiteQuality
SIO_000300: 5.95e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.0e-2

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.228055e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.159999999999999e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele num: 8650
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
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African
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Other
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allele frequency: 0.0e0
allele num: 906
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66726
num of homozygotes: 0

Latino
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VQSLOD
type: SiteQuality
SIO_000300: 8.090000000000001e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele num: 8650
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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Latino
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allele frequency: 2.591568762957844e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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DP
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
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QD
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele num: 11576
num of homozygotes: 0

African
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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MQRankSum
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QD
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DP
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InbreedingCoeff
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FS
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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South Asian
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Other
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African
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Latino
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East Asian
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European (Non-Finnish)
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allele frequency: 2.997332374186974e-5
allele num: 66726
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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MQRankSum
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DP
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ClippingRankSum
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MQ
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QD
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VQSLOD
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InbreedingCoeff
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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African
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Other
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European (Finnish)
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South Asian
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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FS
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DP
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BaseQRankSum
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InbreedingCoeff
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MQ
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3398
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.259e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 9.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.739e-1

FS
type: SiteQuality
SIO_000300: 2.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.617e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e0

DP
type: SiteQuality
SIO_000300: 3.226993e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 2720
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 10

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 9
allele frequency: 8.652182272639877e-4
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.17e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.09e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

DP
type: SiteQuality
SIO_000300: 3.227213e6

QD
type: SiteQuality
SIO_000300: 1.398e1

GenotypeQuality
all individuals: 2117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.453e1

VQSLOD
type: SiteQuality
SIO_000300: 4.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.276e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 3.191e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 3.226211e6

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1438
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
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GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43610
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3113
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.74e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.038e0

MQRankSum
type: SiteQuality
SIO_000300: -7.78e-1

FS
type: SiteQuality
SIO_000300: 1.457e0

DP
type: SiteQuality
SIO_000300: 3.225076e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 1.458e1

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3203
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variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.505703422053232e-4
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.544e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.63e-1

DP
type: SiteQuality
SIO_000300: 3.224553e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.255e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 2705
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43612
bin: 9.75e1
variant carriers: 4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.624277456647399e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.016e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.042e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

QD
type: SiteQuality
SIO_000300: 1.329e1

VQSLOD
type: SiteQuality
SIO_000300: 7.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.34e-1

DP
type: SiteQuality
SIO_000300: 3.220713e6

MQRankSum
type: SiteQuality
SIO_000300: -3.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 26
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 43612
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2360
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499925003749813e-5
allele num: 66670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.83e-1

FS
type: SiteQuality
SIO_000300: 5.016e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.29e-1

QD
type: SiteQuality
SIO_000300: 1.329e1

DP
type: SiteQuality
SIO_000300: 3.220713e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.042e0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 87
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2010
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GenotypeQuality
all individuals: 3114
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 199
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GenotypeQuality
all individuals: 2755
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.594706798131811e-4
allele num: 11562
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-1

DP
type: SiteQuality
SIO_000300: 3.219775e6

VQSLOD
type: SiteQuality
SIO_000300: 2.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-2

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.657e1

GenotypeQuality
all individuals: 2688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 130
bin: 4.25e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 223
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variant carriers: 0

GenotypeQuality
all individuals: 1399
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.21976e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.87e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.84e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.05e0

QD
type: SiteQuality
SIO_000300: 1.377e1

GenotypeQuality
all individuals: 3103
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 3.75e1
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GenotypeQuality
all individuals: 143
bin: 5.75e1
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GenotypeQuality
all individuals: 2688
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GenotypeQuality
all individuals: 83
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 2268
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GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 104
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GenotypeQuality
all individuals: 1922
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variant carriers: 0

Other
type: Population
allele count: 3
allele frequency: 3.311258278145695e-3
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.000900090009001e-5
allele num: 66660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.211240310077519e-3
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 151
allele frequency: 1.746068455134135e-2
allele num: 8648
num of homozygotes: 1

Latino
type: Population
allele count: 2
allele frequency: 1.731301939058172e-4
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.65e-1

QD
type: SiteQuality
SIO_000300: 1.377e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.87e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.05e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.21976e6

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1749
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.05010501050105e-4
allele num: 66660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.724e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

QD
type: SiteQuality
SIO_000300: 1.563e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

DP
type: SiteQuality
SIO_000300: 3.219261e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.22e0

GenotypeQuality
all individuals: 172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.15e-1

DP
type: SiteQuality
SIO_000300: 3.219284e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.22e-1

MQ
type: SiteQuality
SIO_000300: 5.078e1

MQRankSum
type: SiteQuality
SIO_000300: -3.581e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

QD
type: SiteQuality
SIO_000300: 3.55e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4271
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.011503945070168e-5
allele num: 66412
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.289e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.35902e6

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-1

FS
type: SiteQuality
SIO_000300: 1.694e0

QD
type: SiteQuality
SIO_000300: 9.220000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505208019748329e-5
allele num: 66436
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.95e-1

DP
type: SiteQuality
SIO_000300: 2.368914e6

VQSLOD
type: SiteQuality
SIO_000300: 5.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.551e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e-1

FS
type: SiteQuality
SIO_000300: 2.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.206e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.43e-1

FS
type: SiteQuality
SIO_000300: 2.065e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e0

VQSLOD
type: SiteQuality
SIO_000300: 3.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.562e0

DP
type: SiteQuality
SIO_000300: 2.374167e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.655e1

GenotypeQuality
all individuals: 123
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7852
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504392827055001e-5
allele num: 66472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.814e1

DP
type: SiteQuality
SIO_000300: 2.378222e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.576e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.113e0

FS
type: SiteQuality
SIO_000300: 1.898e0

VQSLOD
type: SiteQuality
SIO_000300: -1.962e0

QD
type: SiteQuality
SIO_000300: 1.079e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.98e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.043e0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 2.385476e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.47e-1

QD
type: SiteQuality
SIO_000300: 1.403e1

MQ
type: SiteQuality
SIO_000300: 5.949e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.506669871409686e-5
allele num: 66568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.35e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.288e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.986e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.51e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.386044e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.313208420078649e-4
allele num: 8646
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66604
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQ
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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SIO_000300: 7.98e-1

ReadPosRankSum
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VQSLOD
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SIO_000300: 4.68e-1

BaseQRankSum
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FS
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SIO_000300: 2.629e0

DP
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SIO_000300: 2.387145e6

ClippingRankSum
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SIO_000300: -1.504e0

QD
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SIO_000300: 9.94e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66610
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
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allele frequency: 6.059871530723549e-5
allele num: 16502
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BaseQRankSum
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SIO_000300: -1.808e0

DP
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VQSLOD
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FS
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
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ReadPosRankSum
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QD
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MQ
type: SiteQuality
SIO_000300: 5.863e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66608
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.388519e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

MQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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ReadPosRankSum
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 5.34e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.388963e6

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
SIO_000300: 1.004e1

FS
type: SiteQuality
SIO_000300: 1.244e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.92492781520693e-4
allele num: 10390
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.169999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.36e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

ReadPosRankSum
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QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 5.39e-1

DP
type: SiteQuality
SIO_000300: 2.389117e6

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.02e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

BaseQRankSum
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ClippingRankSum
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DP
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VQSLOD
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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QD
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MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66636
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African
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South Asian
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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QD
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 16512
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Other
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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Latino
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QD
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BaseQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQ
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MQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

South Asian
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African
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Other
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East Asian
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allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.123e1

FS
type: SiteQuality
SIO_000300: 3.943e0

VQSLOD
type: SiteQuality
SIO_000300: -9.0e-2

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

BaseQRankSum
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SIO_000300: -2.806e0

FS
type: SiteQuality
SIO_000300: 3.703e0

ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
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DP
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

East Asian
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
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SIO_000300: 2.29e0

MQRankSum
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SIO_000300: 4.96e-1

QD
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VQSLOD
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ReadPosRankSum
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.238e0

DP
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InbreedingCoeff
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SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501140867058965e-5
allele num: 66616
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.38e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

DP
type: SiteQuality
SIO_000300: 2.389114e6

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.802e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.059e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501140867058965e-5
allele num: 66616
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.38e-1

ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.931e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.802e0

MQRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.035e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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ReadPosRankSum
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QD
type: SiteQuality
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DP
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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ClippingRankSum
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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European (Non-Finnish)
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allele frequency: 6.009976561091412e-5
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African
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Latino
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Other
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MQRankSum
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MQ
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ClippingRankSum
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QD
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VQSLOD
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FS
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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Latino
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East Asian
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Other
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South Asian
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European (Non-Finnish)
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MQRankSum
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MQ
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FS
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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QD
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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East Asian
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Other
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FS
type: SiteQuality
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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QD
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DP
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.202067556196658e-4
allele num: 66552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.49e1

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-3

FS
type: SiteQuality
SIO_000300: 2.505e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e0

DP
type: SiteQuality
SIO_000300: 2.387306e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 7521
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2635
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2972
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29649
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4260
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4177
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.202356618973188e-4
allele num: 66536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.359e1

FS
type: SiteQuality
SIO_000300: 5.19e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.387716e6

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2974
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4587
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29651
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4261
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502810255177181e-5
allele num: 66542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

DP
type: SiteQuality
SIO_000300: 2.387826e6

FS
type: SiteQuality
SIO_000300: 5.737e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.007e0

MQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.64e-1

QD
type: SiteQuality
SIO_000300: 1.47e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

GenotypeQuality
all individuals: 4587
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3943
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4261
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4181
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502810255177181e-5
allele num: 66542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.64e-1

DP
type: SiteQuality
SIO_000300: 2.387826e6

QD
type: SiteQuality
SIO_000300: 1.47e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.007e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.53e0

FS
type: SiteQuality
SIO_000300: 5.737e0

MQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.08e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6963
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2651
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29663
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3950
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2969
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503578516870151e-5
allele num: 66508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.669e1

DP
type: SiteQuality
SIO_000300: 2.389597e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 2.681e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: -1.867e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.54e-1

GenotypeQuality
all individuals: 4542
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4218
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3965
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2994
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29681
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4304
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503759398496241e-5
allele num: 66500
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

DP
type: SiteQuality
SIO_000300: 2.391971e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.711e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.43e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

VQSLOD
type: SiteQuality
SIO_000300: 3.74e0

GenotypeQuality
all individuals: 170
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4228
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3970
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4570
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29687
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.625346901017577e-4
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66506
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.146e1

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

FS
type: SiteQuality
SIO_000300: 3.606e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 2.392788e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2668
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6756
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4554
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4337
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4250
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.052568266570432e-4
allele num: 66504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818622696411251e-4
allele num: 16496
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.487e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

DP
type: SiteQuality
SIO_000300: 2.394941e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

GenotypeQuality
all individuals: 2682
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4259
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3010
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29743
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
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GenotypeQuality
all individuals: 229
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6823
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.891287586738628e-4
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.29e-1

QD
type: SiteQuality
SIO_000300: 1.244e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.312e0

FS
type: SiteQuality
SIO_000300: 1.7017e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

DP
type: SiteQuality
SIO_000300: 2.395263e6

GenotypeQuality
all individuals: 218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4589
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4363
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2683
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.171e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

MQRankSum
type: SiteQuality
SIO_000300: -3.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.57e-1

DP
type: SiteQuality
SIO_000300: 2.395899e6

QD
type: SiteQuality
SIO_000300: 1.43e1

MQ
type: SiteQuality
SIO_000300: 5.929e1

VQSLOD
type: SiteQuality
SIO_000300: -2.594e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.04e-1

FS
type: SiteQuality
SIO_000300: 2.581e0

VQSLOD
type: SiteQuality
SIO_000300: 6.54e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.308e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.88e-1

DP
type: SiteQuality
SIO_000300: 2.396317e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499970000599988e-5
allele num: 66668
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.574e0

DP
type: SiteQuality
SIO_000300: 5.438153e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.954e0

FS
type: SiteQuality
SIO_000300: 3.168e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: 7.08e-1

QD
type: SiteQuality
SIO_000300: 1.422e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.45e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.894e0

DP
type: SiteQuality
SIO_000300: 5.439388e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.533e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.192e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.97e-1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 586
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variant carriers: 0

GenotypeQuality
all individuals: 113
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 2.894e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.533e0

DP
type: SiteQuality
SIO_000300: 5.439388e6

MQRankSum
type: SiteQuality
SIO_000300: 6.97e-1

QD
type: SiteQuality
SIO_000300: 1.192e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

GenotypeQuality
all individuals: 126
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 195

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 143
allele frequency: 8.684562128021378e-3
allele num: 16466
num of homozygotes: 3

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 52
allele frequency: 7.799844003119938e-4
allele num: 66668
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 5.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.246e1

DP
type: SiteQuality
SIO_000300: 5.441324e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.04e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.881e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.103e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.622140050843541e-4
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.446291e6

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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VQSLOD
type: SiteQuality
SIO_000300: 3.63e0

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.984e1

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

DP
type: SiteQuality
SIO_000300: 5.450713e6

QD
type: SiteQuality
SIO_000300: 1.405e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.07e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.24e-1

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 24
allele frequency: 2.773284030506125e-3
allele num: 8654
num of homozygotes: 1

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.240882103477523e-4
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.2989443378119e-4
allele num: 66688
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.07e-2

MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 5.450713e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

QD
type: SiteQuality
SIO_000300: 1.405e1

FS
type: SiteQuality
SIO_000300: 6.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1477
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54932
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 453
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.498695378340282e-5
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.451779e6

MQ
type: SiteQuality
SIO_000300: 5.991e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

QD
type: SiteQuality
SIO_000300: 1.417e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.58e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 9.019e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.294e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

DP
type: SiteQuality
SIO_000300: 5.452621e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: -2.785e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

QD
type: SiteQuality
SIO_000300: 1.288e1

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 15
bin: 7.25e1
variant carriers: 15

GenotypeQuality
all individuals: 60415
bin: 9.75e1
variant carriers: 60415

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 16
bin: 6.25e1
variant carriers: 16

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 42
bin: 7.75e1
variant carriers: 42

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 65

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 8.25e1
variant carriers: 51

GenotypeQuality
all individuals: 37
bin: 8.75e1
variant carriers: 37

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 11

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 5

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 6614
allele frequency: 1.0e0
allele num: 6614
num of homozygotes: 3307

African
type: Population
allele count: 10404
allele frequency: 1.0e0
allele num: 10404
num of homozygotes: 5202

East Asian
type: Population
allele count: 8654
allele frequency: 1.0e0
allele num: 8654
num of homozygotes: 4327

Other
type: Population
allele count: 904
allele frequency: 1.0e0
allele num: 904
num of homozygotes: 452

Latino
type: Population
allele count: 11578
allele frequency: 1.0e0
allele num: 11578
num of homozygotes: 5789

European (Non-Finnish)
type: Population
allele count: 66724
allele frequency: 1.0e0
allele num: 66724
num of homozygotes: 33362

South Asian
type: Population
allele count: 16512
allele frequency: 1.0e0
allele num: 16512
num of homozygotes: 8256

MQRankSum
type: SiteQuality
SIO_000300: 7.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

FS
type: SiteQuality
SIO_000300: 2.939e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 9.265604e6

QD
type: SiteQuality
SIO_000300: 3.412e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

GenotypeQuality
all individuals: 518
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3564
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53035
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 782
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 5.624342e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.598e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.473e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-1

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3574
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 8.25e1
variant carriers: 0