10-135088524-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135088524
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135088524
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 66
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.150+464C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.189+464C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.201+464C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.393+464C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.47-785C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.151-30C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.47-785C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.150+464C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6554
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4958
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

10-135088942-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135088942
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135088942
    reference: chr 10
allele count: 58
allele frequency: 3.300705668108354e-3
allele num: 17572
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.201+46C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.150+46C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.47-1203C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.393+46C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.150+46C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.47-1203C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.150+46C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.189+46C>G
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 32316
  bin: 2.5e0
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 7.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 10060
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1314
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 1.75e1
  variant carriers: 2
num of homozygotes: 1
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

10-135088954-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135088954
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135088954
    reference: chr 10
allele count: 1
allele frequency: 5.656748500961647e-5
allele num: 17678
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.201+34C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.150+34C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.393+34C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.150+34C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.150+34C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.47-1215C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.47-1215C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.189+34C>A
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33784
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27595
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5503
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

10-135088995-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135088995
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135088995
    reference: chr 10
allele count: 5
allele frequency: 2.721829069134459e-4
allele num: 18370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.143C>T
  hgvsp: ENSP00000453855.1:p.Ser48Phe
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.143C>T
  hgvsp: ENSP00000453302.1:p.Ser48Phe
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.143C>T
  hgvsp: ENSP00000453735.1:p.Ser48Phe
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.182C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.386C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.194C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.47-1256C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.47-1256C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34666
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4742
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32593
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser48Phe
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

10-135089010-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089010
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089010
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 18708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.167G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.128G>A
  hgvsp: ENSP00000453855.1:p.Arg43His
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.179G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.371G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.128G>A
  hgvsp: ENSP00000453302.1:p.Arg43His
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.128G>A
  hgvsp: ENSP00000453735.1:p.Arg43His
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1266G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1266G>A
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10860
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4738
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8384
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg43His
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

10-135089011-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089011
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089011
    reference: chr 10
allele count: 1
allele frequency: 5.327650506126798e-5
allele num: 18770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1265C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1265C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.370C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.127C>T
  hgvsp: ENSP00000453855.1:p.Arg43Cys
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.166C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.127C>T
  hgvsp: ENSP00000453302.1:p.Arg43Cys
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.127C>T
  hgvsp: ENSP00000453735.1:p.Arg43Cys
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.178C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32908
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11016
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30946
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1300
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg43Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

10-135089017-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089017
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089017
    reference: chr 10
allele count: 3
allele frequency: 1.58999364002544e-4
allele num: 18868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.121C>T
  hgvsp: ENSP00000453855.1:p.Arg41Ter
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.121C>T
  hgvsp: ENSP00000453302.1:p.Arg41Ter
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.172C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.364C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.121C>T
  hgvsp: ENSP00000453735.1:p.Arg41Ter
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1259C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1259C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.160C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32083
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12053
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30563
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg41Ter
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

10-135089017-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089017
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089017
    reference: chr 10
allele count: 1
allele frequency: 5.2999788000848e-5
allele num: 18868
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.172C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.121C>G
  hgvsp: ENSP00000453855.1:p.Arg41Gly
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1259C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.121C>G
  hgvsp: ENSP00000453735.1:p.Arg41Gly
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1259C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.364C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.160C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.121C>G
  hgvsp: ENSP00000453302.1:p.Arg41Gly
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12053
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32083
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8961
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg41Gly
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

10-135089019-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089019
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089019
    reference: chr 10
allele count: 1
allele frequency: 5.277044854881267e-5
allele num: 18950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.119C>T
  hgvsp: ENSP00000453735.1:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.119C>T
  hgvsp: ENSP00000453855.1:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.119C>T
  hgvsp: ENSP00000453302.1:p.Pro40Leu
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1257C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.362C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.158C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1257C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.170C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31651
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.75e1
  variant carriers: 1
hgvs: p.Pro40Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

10-135089025-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089025
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089025
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 19172
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.152C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1251C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.164C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.356C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.113C>A
  hgvsp: ENSP00000453302.1:p.Pro38Gln
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1251C>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.113C>A
  hgvsp: ENSP00000453855.1:p.Pro38Gln
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.113C>A
  hgvsp: ENSP00000453735.1:p.Pro38Gln
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30392
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4736
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8405
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29198
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro38Gln
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

10-135089027-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089027
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089027
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 19238
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1249G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.111G>A
  hgvsp: ENST00000415217.3:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.162G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.111G>A
  hgvsp: ENST00000445355.3:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.111G>A
  hgvsp: ENST00000486609.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.354G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.150G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1249G>A
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13412
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30018
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28922
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu37Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

10-135089031-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089031
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089031
    reference: chr 10
allele count: 28
allele frequency: 1.439588688946015e-3
allele num: 19450
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.107G>A
  hgvsp: ENSP00000453302.1:p.Arg36His
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.350G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.146G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.158G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.107G>A
  hgvsp: ENSP00000453855.1:p.Arg36His
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.107G>A
  hgvsp: ENSP00000453735.1:p.Arg36His
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1245G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1245G>A
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29412
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13889
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 28603
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4754
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.75e1
  variant carriers: 3
hgvs: p.Arg36His
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD

10-135089032-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089032
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089032
    reference: chr 10
allele count: 1
allele frequency: 5.136106831022085e-5
allele num: 19470
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1244C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.157C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.349C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.106C>T
  hgvsp: ENSP00000453735.1:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.145C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.106C>T
  hgvsp: ENSP00000453855.1:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.106C>T
  hgvsp: ENSP00000453302.1:p.Arg36Cys
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1244C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14038
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29226
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8842
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg36Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/10-135089034-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089034
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089034
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 19584
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1242G>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.104G>T
  hgvsp: ENSP00000453855.1:p.Trp35Leu
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.347G>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1242G>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.104G>T
  hgvsp: ENSP00000453735.1:p.Trp35Leu
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.143G>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.155G>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.104G>T
  hgvsp: ENSP00000453302.1:p.Trp35Leu
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28455
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2279
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4251
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Trp35Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

10-135089034-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089034
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089034
    reference: chr 10
allele count: 8
allele frequency: 4.084967320261438e-4
allele num: 19584
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.143G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1242G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.104G>A
  hgvsp: ENSP00000453735.1:p.Trp35Ter
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.347G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1242G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.104G>A
  hgvsp: ENSP00000453855.1:p.Trp35Ter
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.104G>A
  hgvsp: ENSP00000453302.1:p.Trp35Ter
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.155G>A
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28455
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14242
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2279
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Trp35Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

10-135089035-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089035
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089035
    reference: chr 10
allele count: 22954
allele frequency: 9.016419200251394e-1
allele num: 25458
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.103T>C
  hgvsp: ENSP00000453735.1:p.Trp35Arg
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.346T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.103T>C
  hgvsp: ENSP00000453302.1:p.Trp35Arg
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.142T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.103T>C
  hgvsp: ENSP00000453855.1:p.Trp35Arg
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1241T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.154T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1241T>C
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 417
genotype depth: GenotypeDepth
  all individuals: 3567
  bin: 1.25e1
  variant carriers: 3494
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 9.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.75e1
  variant carriers: 880
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 5.75e1
  variant carriers: 776
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 2.75e1
  variant carriers: 595
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 2.25e1
  variant carriers: 538
genotype depth: GenotypeDepth
  all individuals: 14569
  bin: 2.5e0
  variant carriers: 12203
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.75e1
  variant carriers: 530
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 6.25e1
  variant carriers: 512
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.75e1
  variant carriers: 816
genotype depth: GenotypeDepth
  all individuals: 19924
  bin: 7.5e0
  variant carriers: 18432
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.25e1
  variant carriers: 663
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.25e1
  variant carriers: 831
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.25e1
  variant carriers: 882
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 323
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 4.75e1
  variant carriers: 875
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 218
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 160
genotype quality: GenotypeQuality
  all individuals: 9477
  bin: 1.75e1
  variant carriers: 9441
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 6.75e1
  variant carriers: 392
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 7.25e1
  variant carriers: 210
genotype quality: GenotypeQuality
  all individuals: 2710
  bin: 2.5e0
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 2.75e1
  variant carriers: 1803
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 3.75e1
  variant carriers: 845
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.25e1
  variant carriers: 349
hgvs: p.Trp35Arg
num of homozygotes: 10318
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

10-135089036-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089036
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089036
    reference: chr 10
allele count: 3
allele frequency: 1.454898157129001e-4
allele num: 20620
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.102G>C
  hgvsp: ENST00000445355.3:c.102G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.153G>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.141G>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1240G>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.102G>C
  hgvsp: ENST00000486609.1:c.102G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1240G>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.102G>C
  hgvsp: ENST00000415217.3:c.102G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.345G>C
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13986
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28742
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3913
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro34Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

10-135089036-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089036
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089036
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 20620
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.102G>A
  hgvsp: ENST00000486609.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.345G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1240G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1240G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.102G>A
  hgvsp: ENST00000445355.3:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.153G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.141G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.102G>A
  hgvsp: ENST00000415217.3:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: synonymous
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13986
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28742
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5422
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9615
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27833
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3913
  bin: 1.75e1
  variant carriers: 1
hgvs: p.Pro34Pro
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

10-135089037-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089037
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089037
    reference: chr 10
allele count: 4
allele frequency: 1.946850968558357e-4
allele num: 20546
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1239C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.140C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.152C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1239C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.344C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.101C>T
  hgvsp: ENSP00000453302.1:p.Pro34Leu
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.101C>T
  hgvsp: ENSP00000453735.1:p.Pro34Leu
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.101C>T
  hgvsp: ENSP00000453855.1:p.Pro34Leu
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29064
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13912
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3594
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro34Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD

10-135089038-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089038
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089038
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 20422
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.100C>T
  hgvsp: ENSP00000453855.1:p.Pro34Ser
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1238C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.100C>T
  hgvsp: ENSP00000453735.1:p.Pro34Ser
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.343C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.139C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.100C>T
  hgvsp: ENSP00000453302.1:p.Pro34Ser
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1238C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.151C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29392
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5454
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28323
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro34Ser
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/10-135089041-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089041
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089041
    reference: chr 10
allele count: 1
allele frequency: 4.938759383642829e-5
allele num: 20248
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1235T>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1235T>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.148T>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.136T>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.97T>G
  hgvsp: ENSP00000453735.1:p.Leu33Val
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.97T>G
  hgvsp: ENSP00000453855.1:p.Leu33Val
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.340T>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.97T>G
  hgvsp: ENSP00000453302.1:p.Leu33Val
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5408
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2148
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu33Val
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

10-135089045-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089045
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089045
    reference: chr 10
allele count: 13
allele frequency: 6.510416666666666e-4
allele num: 19968
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.132C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.93C>T
  hgvsp: ENST00000415217.3:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1231C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.93C>T
  hgvsp: ENST00000445355.3:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.144C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.93C>T
  hgvsp: ENST00000486609.1:c.93C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1231C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.336C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12847
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 30949
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1222
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val31Val
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

10-135089057-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089057
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089057
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 19106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.324G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.81G>A
  hgvsp: ENST00000445355.3:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1219G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.132G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1219G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.120G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.81G>A
  hgvsp: ENST00000415217.3:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.81G>A
  hgvsp: ENST00000486609.1:c.81G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32688
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11426
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1666
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1370
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31395
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu27Glu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

10-135089060-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089060
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089060
    reference: chr 10
allele count: 1
allele frequency: 5.396071659831642e-5
allele num: 18532
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.78G>A
  hgvsp: ENSP00000453302.1:p.Met26Ile
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1216G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.321G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.78G>A
  hgvsp: ENSP00000453855.1:p.Met26Ile
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.117G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.129G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1216G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.78G>A
  hgvsp: ENSP00000453735.1:p.Met26Ile
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10877
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33054
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1549
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met26Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

10-135089066-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089066
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089066
    reference: chr 10
allele count: 31
allele frequency: 1.722796487718128e-3
allele num: 17994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1210C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.123C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.72C>T
  hgvsp: ENST00000486609.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.72C>T
  hgvsp: ENST00000445355.3:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.111C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1210C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.315C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.72C>T
  hgvsp: ENST00000415217.3:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33482
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10242
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 9.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Ala24Ala
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP

10-135089077-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089077
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089077
    reference: chr 10
allele count: 415
allele frequency: 2.43658994833255e-2
allele num: 17032
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.304C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.100C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.112C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1199C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.61C>T
  hgvsp: ENSP00000453855.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.61C>T
  hgvsp: ENSP00000453302.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.61C>T
  hgvsp: ENSP00000453735.1:p.Arg21Trp
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1199C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 3.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 33657
  bin: 2.5e0
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 3.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 8957
  bin: 7.5e0
  variant carriers: 442
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 1.25e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 2.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 2.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 4477
  bin: 6.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 1.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 28
hgvs: p.Arg21Trp
num of homozygotes: 5
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

10-135089090-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089090
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089090
    reference: chr 10
allele count: 2
allele frequency: 1.303441084462982e-4
allele num: 15344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.291G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.87G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.48G>A
  hgvsp: ENST00000486609.1:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.99G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1186G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.48G>A
  hgvsp: ENST00000445355.3:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.48G>A
  hgvsp: ENST00000415217.3:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1186G>A
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34636
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
hgvs: c.48G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

10-135089091-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089091
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089091
    reference: chr 10
allele count: 1
allele frequency: 6.640106241699867e-5
allele num: 15060
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.47C>T
  hgvsp: ENSP00000453855.1:p.Ala16Val
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.47C>T
  hgvsp: ENSP00000453735.1:p.Ala16Val
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1185C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.47C>T
  hgvsp: ENSP00000453302.1:p.Ala16Val
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1185C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.86C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.290C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.98C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34564
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3459
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala16Val
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

10-135089116-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089116
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089116
    reference: chr 10
allele count: 11
allele frequency: 9.174311926605505e-4
allele num: 11990
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.98-25T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.47-25T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.86-25T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1160T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1160T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.290-25T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.47-25T>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.47-25T>C
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30750
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4734
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26491
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

10-135089125-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089125
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089126
    reference: chr 10
allele count: 3
allele frequency: 2.900232018561485e-4
allele num: 10344
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.290-35dupC
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1150dupC
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.47-35dupC
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.86-35dupC
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.47-35dupC
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.47-35dupC
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.98-35dupC
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1150dupC
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22881
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4090
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6771
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

10-135089126-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089126
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089126
    reference: chr 10
allele count: 1
allele frequency: 9.873617693522907e-5
allele num: 10128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.290-35C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.98-35C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.86-35C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1150C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.47-35C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1150C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.47-35C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.47-35C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28997
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22645
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6890
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

10-135089134-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135089134
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135089134
    reference: chr 10
allele count: 1
allele frequency: 1.075500107550011e-4
allele num: 9298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.86-43C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+1142C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000537099
  gene symbol: ADAM8
  hgvsc: ENST00000537099.1:n.290-43C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+1142C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.98-43C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.47-43C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.47-43C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.47-43C>G
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28002
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3490
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8892
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ

10-135090264-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135090264
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135090265
    reference: chr 10
allele count: 65
allele frequency: 5.647263249348393e-3
allele num: 11510
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.46+11_46+12insG
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.46+11_46+12insG
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.97+11_97+12insG
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.46+11_46+12insG
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.46+11_46+12insG
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.85+11_85+12insG
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.46+11_46+12insG
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13886
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 7.5e0
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 9.75e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 3
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

10-135090294-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135090294
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135090294
    reference: chr 10
allele count: 2
allele frequency: 1.70590242238144e-4
allele num: 11724
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.79G>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.28G>C
  hgvsp: ENSP00000453855.1:p.Gly10Arg
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.67G>C
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.28G>C
  hgvsp: ENSP00000453302.1:p.Gly10Arg
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.28G>C
  hgvsp: ENSP00000453043.1:p.Gly10Arg
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.28G>C
  hgvsp: ENSP00000453735.1:p.Gly10Arg
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.28G>C
  hgvsp: ENSP00000452994.1:p.Gly10Arg
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14635
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13508
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly10Arg
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

10-135090301-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135090301
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135090301
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 11716
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.21G>A
  hgvsp: ENSP00000453302.1:p.Trp7Ter
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.21G>A
  hgvsp: ENSP00000453043.1:p.Trp7Ter
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.60G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.72G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.21G>A
  hgvsp: ENSP00000453855.1:p.Trp7Ter
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.21G>A
  hgvsp: ENSP00000452994.1:p.Trp7Ter
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.21G>A
  hgvsp: ENSP00000453735.1:p.Trp7Ter
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: stop gained
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14505
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Trp7Ter
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

10-135090322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135090322
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135090322
    reference: chr 10
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.-1C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.51C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.-1C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.-1C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.39C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3256
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-135090325-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135090325
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135090325
    reference: chr 10
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.36G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.-4G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.48G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.-4G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.-4G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.-4G>A
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

10-135090332-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135090332
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135090332
    reference: chr 10
allele count: 19
allele frequency: 1.648160999306038e-3
allele num: 11528
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.-11C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.41C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453855
  ensembl transcript: ENST00000415217
  gene symbol: ADAM8
  hgvsc: ENST00000415217.3:c.-11C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.-11C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.29C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.-11C>G
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.-11C>G
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10207
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

10-135090360-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135090360
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135090360
    reference: chr 10
allele count: 1
allele frequency: 8.947745168217609e-5
allele num: 11176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.-39G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.-39G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453735
  ensembl transcript: ENST00000486609
  gene symbol: ADAM8
  hgvsc: ENST00000486609.1:c.-39G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000463298
  gene symbol: ADAM8
  hgvsc: ENST00000463298.1:n.1G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000452994
  ensembl transcript: ENST00000560135
  gene symbol: ADAM8
  hgvsc: ENST00000560135.1:c.-39G>A
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.13G>A
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1881
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6645
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3801
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

10-135090369-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135090369
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135090369
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 11106
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453043
  ensembl transcript: ENST00000485491
  gene symbol: ADAM8
  hgvsc: ENST00000485491.2:c.-48C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000151651
  ensembl transcript: ENST00000559180
  gene symbol: ADAM8
  hgvsc: ENST00000559180.1:n.4C>T
  variant of: http://identifiers.org/hgnc/215
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000151651
  ensembl protein: ENSP00000453302
  ensembl transcript: ENST00000445355
  gene symbol: ADAM8
  hgvsc: ENST00000445355.3:c.-48C>T
  variant of: http://identifiers.org/hgnc/215
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10358
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5768
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4674
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

10-135093238-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093238
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093238
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 15630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.*32G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.418G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*538G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.*32G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.*32G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.*32G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.*32G>A
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36783
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31758
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP

10-135093244-CCCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093244
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093240
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 15914
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.408_411delAAGG
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.*22_*25delAAGG
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.*22_*25delAAGG
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*528_*531delAAGG
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.*22_*25delAAGG
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.*22_*25delAAGG
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.*22_*25delAAGG
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 11826
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2929
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31931
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: CCCTT
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

10-135093247-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093247
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093247
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 16062
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.*23A>C
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.*23A>C
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.*23A>C
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.*23A>C
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.409A>C
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.*23A>C
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*529A>C
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12515
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35670
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31886
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9069
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3066
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

10-135093253-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093253
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093253
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 16262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.*17G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.403G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.*17G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*523G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.*17G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.*17G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.*17G>A
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34515
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10447
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2672
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

10-135093258-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093258
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093258
    reference: chr 10
allele count: 1
allele frequency: 6.074596039363382e-5
allele num: 16462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.*12G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.*12G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*518G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.*12G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.*12G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.398G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.*12G>A
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15696
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3222
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1734
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30786
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

10-135093268-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093268
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093268
    reference: chr 10
allele count: 1
allele frequency: 5.887894488930759e-5
allele num: 16984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*508C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.388C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.*2C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.*2C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.*2C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.*2C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.*2C>T
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19131
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30416
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28533
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3285
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD

10-135093279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093279
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093279
    reference: chr 10
allele count: 1
allele frequency: 5.579734404642339e-5
allele num: 17922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2700C>T
  hgvsp: ENST00000368563.2:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2784C>T
  hgvsp: ENST00000543663.1:c.2784C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*497C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1479C>T
  hgvsp: ENST00000368562.1:c.1479C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2310C>T
  hgvsp: ENST00000417178.2:c.2310C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2700C>T
  hgvsp: ENST00000252936.3:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.377C>T
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22766
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26871
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18112
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2816
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 8.75e1
  variant carriers: 1
hgvs: p.Thr928Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

10-135093284-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093284
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093284
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 18412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.372G>C
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2779G>C
  hgvsp: ENSP00000446093.1:p.Val927Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2695G>C
  hgvsp: ENSP00000252936.3:p.Val899Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2305G>C
  hgvsp: ENSP00000395666.2:p.Val769Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*492G>C
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1474G>C
  hgvsp: ENSP00000357550.1:p.Val492Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2695G>C
  hgvsp: ENSP00000357551.2:p.Val899Leu
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24151
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25471
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24252
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3400
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18762
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val927Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

10-135093287-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093287
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093287
    reference: chr 10
allele count: 41
allele frequency: 2.189235369500214e-3
allele num: 18728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.369G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2692G>A
  hgvsp: ENSP00000357551.2:p.Ala898Thr
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2776G>A
  hgvsp: ENSP00000446093.1:p.Ala926Thr
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1471G>A
  hgvsp: ENSP00000357550.1:p.Ala491Thr
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2692G>A
  hgvsp: ENSP00000252936.3:p.Ala898Thr
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*489G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2302G>A
  hgvsp: ENSP00000395666.2:p.Ala768Thr
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24330
  bin: 2.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25144
  bin: 7.5e0
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 2.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 3416
  bin: 6.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23162
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 4
hgvs: p.Ala926Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-135093288-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093288
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093288
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 18938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2301C>T
  hgvsp: ENST00000417178.2:c.2301C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2691C>T
  hgvsp: ENST00000252936.3:c.2691C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2691C>T
  hgvsp: ENST00000368563.2:c.2691C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2775C>T
  hgvsp: ENST00000543663.1:c.2775C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*488C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.368C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1470C>T
  hgvsp: ENST00000368562.1:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25803
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23696
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3419
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20420
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3446
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val925Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

10-135093294-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093294
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093294
    reference: chr 10
allele count: 3
allele frequency: 1.522997258604935e-4
allele num: 19698
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*482C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2685C>T
  hgvsp: ENST00000252936.3:c.2685C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.362C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1464C>T
  hgvsp: ENST00000368562.1:c.1464C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2769C>T
  hgvsp: ENST00000543663.1:c.2769C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2295C>T
  hgvsp: ENST00000417178.2:c.2295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2685C>T
  hgvsp: ENST00000368563.2:c.2685C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28189
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21112
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22875
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20348
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro923Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

10-135093296-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093296
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093296
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 20070
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2683C>T
  hgvsp: ENSP00000357551.2:p.Pro895Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1462C>T
  hgvsp: ENSP00000357550.1:p.Pro488Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*480C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2683C>T
  hgvsp: ENSP00000252936.3:p.Pro895Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2767C>T
  hgvsp: ENSP00000446093.1:p.Pro923Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2293C>T
  hgvsp: ENSP00000395666.2:p.Pro765Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.360C>T
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28665
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3303
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2340
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23491
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro923Ser
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

10-135093300-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093300
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093300
    reference: chr 10
allele count: 1
allele frequency: 4.78102887741442e-5
allele num: 20916
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1458T>C
  hgvsp: ENST00000368562.1:c.1458T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2679T>C
  hgvsp: ENST00000368563.2:c.2679T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2289T>C
  hgvsp: ENST00000417178.2:c.2289T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2763T>C
  hgvsp: ENST00000543663.1:c.2763T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2679T>C
  hgvsp: ENST00000252936.3:c.2679T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*476T>C
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.356T>C
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18967
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29881
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18404
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24544
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro921Pro
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-135093302-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093302
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093302
    reference: chr 10
allele count: 8
allele frequency: 3.757632691404415e-4
allele num: 21290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2677C>T
  hgvsp: ENSP00000252936.3:p.Pro893Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2287C>T
  hgvsp: ENSP00000395666.2:p.Pro763Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.354C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1456C>T
  hgvsp: ENSP00000357550.1:p.Pro486Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2677C>T
  hgvsp: ENSP00000357551.2:p.Pro893Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2761C>T
  hgvsp: ENSP00000446093.1:p.Pro921Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*474C>T
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2756
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30542
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25256
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2267
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro921Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

10-135093306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093306
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093306
    reference: chr 10
allele count: 1
allele frequency: 4.502070952638214e-5
allele num: 22212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2673G>A
  hgvsp: ENST00000252936.3:c.2673G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*470G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2673G>A
  hgvsp: ENST00000368563.2:c.2673G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1452G>A
  hgvsp: ENST00000368562.1:c.1452G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2283G>A
  hgvsp: ENST00000417178.2:c.2283G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2757G>A
  hgvsp: ENST00000543663.1:c.2757G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.350G>A
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 31662
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3599
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1684
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro919Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

10-135093306-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093306
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093305
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 22212
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2756delC
  hgvsp: ENSP00000446093.1:p.Pro919ArgfsTer17
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2672delC
  hgvsp: ENSP00000357551.2:p.Pro891ArgfsTer17
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1451delC
  hgvsp: ENSP00000357550.1:p.Pro484ArgfsTer17
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.349delC
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2672delC
  hgvsp: ENSP00000252936.3:p.Pro891ArgfsTer17
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*469delC
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2282delC
  hgvsp: ENSP00000395666.2:p.Pro761ArgfsTer17
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 31662
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16215
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3531
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26283
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1684
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro919ArgfsTer17
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: CG
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-135093307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093307
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093307
    reference: chr 10
allele count: 1
allele frequency: 4.363763309478094e-5
allele num: 22916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2672C>T
  hgvsp: ENSP00000252936.3:p.Pro891Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2672C>T
  hgvsp: ENSP00000357551.2:p.Pro891Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.349C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2756C>T
  hgvsp: ENSP00000446093.1:p.Pro919Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2282C>T
  hgvsp: ENSP00000395666.2:p.Pro761Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1451C>T
  hgvsp: ENSP00000357550.1:p.Pro484Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*469C>T
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32445
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28270
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2545
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14857
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1992
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro919Leu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-135093308-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093308
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093308
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 23614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*468C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2281C>T
  hgvsp: ENSP00000395666.2:p.Pro761Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2755C>T
  hgvsp: ENSP00000446093.1:p.Pro919Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2671C>T
  hgvsp: ENSP00000252936.3:p.Pro891Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1450C>T
  hgvsp: ENSP00000357550.1:p.Pro484Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2671C>T
  hgvsp: ENSP00000357551.2:p.Pro891Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.348C>T
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14692
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32762
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2302
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14470
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3762
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro919Ser
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

10-135093311-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093311
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093310
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 25064
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*464delG
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.344delG
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1446delG
  hgvsp: ENSP00000357550.1:p.Pro484ArgfsTer17
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2667delG
  hgvsp: ENSP00000357551.2:p.Pro891ArgfsTer17
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2667delG
  hgvsp: ENSP00000252936.3:p.Pro891ArgfsTer17
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2751delG
  hgvsp: ENSP00000446093.1:p.Pro919ArgfsTer17
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2277delG
  hgvsp: ENSP00000395666.2:p.Pro761ArgfsTer17
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33484
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13210
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29655
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro919ArgfsTer17
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: GC
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

10-135093312-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093312
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093312
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 25454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1446G>A
  hgvsp: ENST00000368562.1:c.1446G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2667G>A
  hgvsp: ENST00000252936.3:c.2667G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*464G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.344G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2667G>A
  hgvsp: ENST00000368563.2:c.2667G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2277G>A
  hgvsp: ENST00000417178.2:c.2277G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2751G>A
  hgvsp: ENST00000543663.1:c.2751G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13044
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33708
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1706
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1402
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly917Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP

10-135093316-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093316
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093316
    reference: chr 10
allele count: 1
allele frequency: 3.664345914254306e-5
allele num: 27290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1442G>A
  hgvsp: ENSP00000357550.1:p.Arg481Gln
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.340G>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2273G>A
  hgvsp: ENSP00000395666.2:p.Arg758Gln
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2663G>A
  hgvsp: ENSP00000357551.2:p.Arg888Gln
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2747G>A
  hgvsp: ENSP00000446093.1:p.Arg916Gln
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2663G>A
  hgvsp: ENSP00000252936.3:p.Arg888Gln
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*460G>A
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11053
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4608
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10899
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32333
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg916Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

10-135093317-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093317
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093317
    reference: chr 10
allele count: 3
allele frequency: 1.076271794503839e-4
allele num: 27874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2662C>T
  hgvsp: ENSP00000357551.2:p.Arg888Trp
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2272C>T
  hgvsp: ENSP00000395666.2:p.Arg758Trp
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.339C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2746C>T
  hgvsp: ENSP00000446093.1:p.Arg916Trp
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1441C>T
  hgvsp: ENSP00000357550.1:p.Arg481Trp
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2662C>T
  hgvsp: ENSP00000252936.3:p.Arg888Trp
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*459C>T
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4400
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10357
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2742
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4205
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Arg916Trp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

10-135093319-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093319
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093318
    reference: chr 10
allele count: 1
allele frequency: 3.391440005426304e-5
allele num: 29486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2269delC
  hgvsp: ENSP00000395666.2:p.Leu757CysfsTer21
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.336delC
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*456delC
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2659delC
  hgvsp: ENSP00000357551.2:p.Leu887CysfsTer21
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1438delC
  hgvsp: ENSP00000357550.1:p.Leu480CysfsTer21
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2659delC
  hgvsp: ENSP00000252936.3:p.Leu887CysfsTer21
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2743delC
  hgvsp: ENSP00000446093.1:p.Leu915CysfsTer21
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4983
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35957
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9193
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1160
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34355
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu915CysfsTer21
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: AG
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

10-135093320-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093320
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093320
    reference: chr 10
allele count: 49
allele frequency: 1.625530785562633e-3
allele num: 30144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2269C>T
  hgvsp: ENST00000417178.2:c.2269C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*456C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2659C>T
  hgvsp: ENST00000252936.3:c.2659C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2743C>T
  hgvsp: ENST00000543663.1:c.2743C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.336C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1438C>T
  hgvsp: ENST00000368562.1:c.1438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2659C>T
  hgvsp: ENST00000368563.2:c.2659C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36051
  bin: 7.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 1.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 1.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8716
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34528
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 9.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1672
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.75e1
  variant carriers: 1
hgvs: p.Leu915Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

10-135093325-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093325
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093325
    reference: chr 10
allele count: 2
allele frequency: 6.071645415907711e-5
allele num: 32940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2654C>T
  hgvsp: ENSP00000357551.2:p.Pro885Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2738C>T
  hgvsp: ENSP00000446093.1:p.Pro913Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2654C>T
  hgvsp: ENSP00000252936.3:p.Pro885Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.331C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2264C>T
  hgvsp: ENSP00000395666.2:p.Pro755Leu
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*451C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1433C>T
  hgvsp: ENSP00000357550.1:p.Pro478Leu
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6987
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6885
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 7.25e1
  variant carriers: 1
hgvs: p.Pro913Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

10-135093326-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093326
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093326
    reference: chr 10
allele count: 1
allele frequency: 2.99007295778017e-5
allele num: 33444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2653C>T
  hgvsp: ENSP00000357551.2:p.Pro885Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*450C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2263C>T
  hgvsp: ENSP00000395666.2:p.Pro755Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2653C>T
  hgvsp: ENSP00000252936.3:p.Pro885Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1432C>T
  hgvsp: ENSP00000357550.1:p.Pro478Ser
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.330C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2737C>T
  hgvsp: ENSP00000446093.1:p.Pro913Ser
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6760
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5628
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5441
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34746
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro913Ser
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

10-135093332-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093332
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093332
    reference: chr 10
allele count: 2
allele frequency: 5.460601758313766e-5
allele num: 36626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2647C>A
  hgvsp: ENSP00000252936.3:p.Gln883Lys
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*444C>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.324C>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2257C>A
  hgvsp: ENSP00000395666.2:p.Gln753Lys
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1426C>A
  hgvsp: ENSP00000357550.1:p.Gln476Lys
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2647C>A
  hgvsp: ENSP00000357551.2:p.Gln883Lys
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2731C>A
  hgvsp: ENSP00000446093.1:p.Gln911Lys
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2237
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5197
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln911Lys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

10-135093333-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093333
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093333
    reference: chr 10
allele count: 1
allele frequency: 2.669656682150675e-5
allele num: 37458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2646C>T
  hgvsp: ENST00000252936.3:c.2646C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2646C>T
  hgvsp: ENST00000368563.2:c.2646C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2730C>T
  hgvsp: ENST00000543663.1:c.2730C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*443C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.323C>T
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2256C>T
  hgvsp: ENST00000417178.2:c.2256C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1425C>T
  hgvsp: ENST00000368562.1:c.1425C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4911
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro910Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ

10-135093333-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093333
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093333
    reference: chr 10
allele count: 1
allele frequency: 2.669656682150675e-5
allele num: 37458
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2730C>G
  hgvsp: ENST00000543663.1:c.2730C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*443C>G
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2256C>G
  hgvsp: ENST00000417178.2:c.2256C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2646C>G
  hgvsp: ENST00000368563.2:c.2646C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2646C>G
  hgvsp: ENST00000252936.3:c.2646C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1425C>G
  hgvsp: ENST00000368562.1:c.1425C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.323C>G
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4911
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36095
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35539
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7020
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro910Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

10-135093336-G-GGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093336
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093338
    reference: chr 10
allele count: 1
allele frequency: 2.50300360432519e-5
allele num: 39952
alternate allele: GGT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.318_319dupAC
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2725_2726dupAC
  hgvsp: ENSP00000446093.1:p.Gln911ProfsTer26
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2641_2642dupAC
  hgvsp: ENSP00000252936.3:p.Gln883ProfsTer26
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2641_2642dupAC
  hgvsp: ENSP00000357551.2:p.Gln883ProfsTer26
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2251_2252dupAC
  hgvsp: ENSP00000395666.2:p.Gln753ProfsTer26
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*438_*439dupAC
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1420_1421dupAC
  hgvsp: ENSP00000357550.1:p.Gln476ProfsTer26
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4372
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7653
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln911ProfsTer26
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

10-135093337-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093337
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093337
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 40608
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000395666
  ensembl transcript: ENST00000417178
  gene symbol: TUBGCP2
  hgvsc: ENST00000417178.2:c.2252C>A
  hgvsp: ENSP00000395666.2:p.Thr751Asn
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000252936
  ensembl transcript: ENST00000252936
  gene symbol: TUBGCP2
  hgvsc: ENST00000252936.3:c.2642C>A
  hgvsp: ENSP00000252936.3:p.Thr881Asn
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1421C>A
  hgvsp: ENSP00000357550.1:p.Thr474Asn
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000130640
  ensembl transcript: ENST00000477923
  gene symbol: TUBGCP2
  hgvsc: ENST00000477923.1:n.319C>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357551
  ensembl transcript: ENST00000368563
  gene symbol: TUBGCP2
  hgvsc: ENST00000368563.2:c.2642C>A
  hgvsp: ENSP00000357551.2:p.Thr881Asn
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000436438
  ensembl transcript: ENST00000482278
  gene symbol: TUBGCP2
  hgvsc: ENST00000482278.1:c.*439C>A
  variant of: http://identifiers.org/hgnc/18599
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000446093
  ensembl transcript: ENST00000543663
  gene symbol: TUBGCP2
  hgvsc: ENST00000543663.1:c.2726C>A
  hgvsp: ENSP00000446093.1:p.Thr909Asn
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35548
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34882
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr909Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

10-135093339-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135093339
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 135093339
    reference: chr 10
allele count: 1
allele frequency: 2.373154872086952e-5
allele num: 42138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000130640
  ensembl protein: ENSP00000357550
  ensembl transcript: ENST00000368562
  gene symbol: TUBGCP2
  hgvsc: ENST00000368562.1:c.1419C>T
  hgvsp: ENST00000368562.1:c.1419C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18599
canonical: true
consequence: synonymous
filter: PASS
hgvs: p.Ala908Ala
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 8.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.77e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.088e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.169e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.88e-1

DP
type: SiteQuality
SIO_000300: 1.9826e4

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1201
bin: 2.25e1
variant carriers: 7

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21406
bin: 7.5e0
variant carriers: 16

GenotypeQuality
all individuals: 414
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 770
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 4766
bin: 9.75e1
variant carriers: 51

GenotypeQuality
all individuals: 265
bin: 7.25e1
variant carriers: 7

GenotypeQuality
all individuals: 274
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 354
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 8.75e1
variant carriers: 2

Other
type: Population
allele count: 1
allele frequency: 5.813953488372093e-3
allele num: 172
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.058168942842691e-4
allele num: 7908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.179245283018868e-3
allele num: 1696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 51
allele frequency: 7.486788021139166e-3
allele num: 6812
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 384
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.38e-2

QD
type: SiteQuality
SIO_000300: 1.379e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

FS
type: SiteQuality
SIO_000300: 6.42e-1

DP
type: SiteQuality
SIO_000300: 4.75052e5

GenotypeQuality
all individuals: 1935
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 220
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4738
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 364
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.456876456876457e-4
allele num: 6864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.88198e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 3.979e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.110000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.655e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.109e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 211
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1944
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6929
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7196
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.309944472488642e-4
allele num: 7924
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.482e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.04e-2

QD
type: SiteQuality
SIO_000300: 1.1e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

DP
type: SiteQuality
SIO_000300: 5.43538e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1319
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1446
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1897
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31324
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2044
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.64e-2

DP
type: SiteQuality
SIO_000300: 5.59278e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 7.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeQuality
all individuals: 2017
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8049
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1824
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4738
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 369
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.261352169525732e-4
allele num: 7928
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 1.3e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 5.59649e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

GenotypeQuality
all individuals: 1670
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8961
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4736
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 364
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.798464491362764e-4
allele num: 2084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.520161290322581e-4
allele num: 7936
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.358e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.91e-2

DP
type: SiteQuality
SIO_000300: 5.66724e5

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 5.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 30563
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1699
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1663
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4736
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 491
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2084
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.26008064516129e-4
allele num: 7936
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7514
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.66724e5

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.358e1

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.91e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.75e-1

GenotypeQuality
all individuals: 1273
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8544
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 4736
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.784688995215311e-4
allele num: 2090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7934
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 1.23e1

DP
type: SiteQuality
SIO_000300: 5.67708e5

VQSLOD
type: SiteQuality
SIO_000300: -1.601e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.36e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

GenotypeQuality
all individuals: 497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2930
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2114
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7718
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 2.707e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.15e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.168e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 5.73246e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3056
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7766
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2126
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.04e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.141e0

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.63e0

DP
type: SiteQuality
SIO_000300: 5.75295e5

QD
type: SiteQuality
SIO_000300: 3.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.25e1
variant carriers: 2

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 504
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3102
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 339
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8800
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1181
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 420
bin: 9.25e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 1.295097132284921e-2
allele num: 2162
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.8e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.80184e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.61e-2

QD
type: SiteQuality
SIO_000300: 1.406e1

GenotypeQuality
all individuals: 2276
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28509
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 3224
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4740
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 286
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7918
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2162
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.466275659824047e-3
allele num: 682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

DP
type: SiteQuality
SIO_000300: 5.81569e5

ClippingRankSum
type: SiteQuality
SIO_000300: -8.92e-1

FS
type: SiteQuality
SIO_000300: 7.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.76e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.115e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.414e1

GenotypeQuality
all individuals: 27813
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1029
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8138
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4745
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7998
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7960
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

QD
type: SiteQuality
SIO_000300: 1.505e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.85244e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.74e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

GenotypeQuality
all individuals: 27813
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 420
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 164
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 371
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8138
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4745
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 4251
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.250312578144536e-4
allele num: 7998
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 2.770083102493075e-3
allele num: 2166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.256281407035176e-4
allele num: 7960
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.38e-1

QD
type: SiteQuality
SIO_000300: 1.505e1

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 5.85244e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.74e-2

GenotypeQuality
all individuals: 285
bin: 4.25e1
variant carriers: 283

GenotypeQuality
all individuals: 249
bin: 7.75e1
variant carriers: 247

GenotypeQuality
all individuals: 6056
bin: 1.25e1
variant carriers: 6044

GenotypeQuality
all individuals: 454
bin: 5.25e1
variant carriers: 453

GenotypeQuality
all individuals: 7035
bin: 7.5e0
variant carriers: 5928

GenotypeQuality
all individuals: 322
bin: 8.75e1
variant carriers: 319

GenotypeQuality
all individuals: 455
bin: 4.75e1
variant carriers: 455

GenotypeQuality
all individuals: 415
bin: 5.75e1
variant carriers: 415

GenotypeQuality
all individuals: 7909
bin: 9.75e1
variant carriers: 7902

GenotypeQuality
all individuals: 5668
bin: 2.25e1
variant carriers: 5541

GenotypeQuality
all individuals: 1861
bin: 3.25e1
variant carriers: 1859

GenotypeQuality
all individuals: 466
bin: 6.25e1
variant carriers: 413

GenotypeQuality
all individuals: 385
bin: 9.25e1
variant carriers: 384

Latino
type: Population
allele count: 927
allele frequency: 8.411978221415608e-1
allele num: 1102
num of homozygotes: 380

South Asian
type: Population
allele count: 7349
allele frequency: 8.966569058077111e-1
allele num: 8196
num of homozygotes: 3299

European (Finnish)
type: Population
allele count: 180
allele frequency: 9.090909090909091e-1
allele num: 198
num of homozygotes: 81

Other
type: Population
allele count: 213
allele frequency: 9.342105263157895e-1
allele num: 228
num of homozygotes: 100

African
type: Population
allele count: 2576
allele frequency: 9.239598278335724e-1
allele num: 2788
num of homozygotes: 1185

European (Non-Finnish)
type: Population
allele count: 10735
allele frequency: 9.010407923451401e-1
allele num: 11914
num of homozygotes: 4813

East Asian
type: Population
allele count: 974
allele frequency: 9.437984496124031e-1
allele num: 1032
num of homozygotes: 460

DP
type: SiteQuality
SIO_000300: 7.03045e5

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

FS
type: SiteQuality
SIO_000300: 5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.271e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.48e-1

QD
type: SiteQuality
SIO_000300: 2.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5422
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27833
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 353
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GenotypeQuality
all individuals: 9615
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 7.25e1
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GenotypeQuality
all individuals: 341
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 157
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variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 9.25e1
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GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.773584905660377e-4
allele num: 7950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2270
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.431e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.45e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.33709e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

QD
type: SiteQuality
SIO_000300: 1.097e1

VQSLOD
type: SiteQuality
SIO_000300: -5.347e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

GenotypeQuality
all individuals: 515
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
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GenotypeQuality
all individuals: 309
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 6.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7950
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.45e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.347e-1

FS
type: SiteQuality
SIO_000300: 2.431e0

QD
type: SiteQuality
SIO_000300: 1.097e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 4.33709e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
all individuals: 1288
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28062
bin: 7.5e0
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.039052658100278e-4
allele num: 7938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2256
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8688
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 4.32816e5

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.2789e1

QD
type: SiteQuality
SIO_000300: 1.419e1

VQSLOD
type: SiteQuality
SIO_000300: -6.391e-1

GenotypeQuality
all individuals: 798
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3354
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.85e-1

DP
type: SiteQuality
SIO_000300: 4.31651e5

VQSLOD
type: SiteQuality
SIO_000300: -2.413e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.68e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.81e-1

QD
type: SiteQuality
SIO_000300: 1.36e0

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28949
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 332
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.177578897786152e-4
allele num: 8492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7918
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.681e0

FS
type: SiteQuality
SIO_000300: 9.868e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.572e0

MQRankSum
type: SiteQuality
SIO_000300: -2.094e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.154e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.62e-2

DP
type: SiteQuality
SIO_000300: 4.26165e5

QD
type: SiteQuality
SIO_000300: 1.49e1

GenotypeQuality
all individuals: 1245
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5390
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 66
bin: 9.25e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29515
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variant carriers: 2

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 325
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2027
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 336
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9775
bin: 2.25e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 7.042253521126761e-3
allele num: 710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2192
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 1.013684744044602e-3
allele num: 7892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

FS
type: SiteQuality
SIO_000300: 1.306e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.21965e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.369e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.83e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e-1

GenotypeQuality
all individuals: 88
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9417
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5182
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2026
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 70
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7826
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-2

FS
type: SiteQuality
SIO_000300: 1.1119e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.756e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 4.0441e5

QD
type: SiteQuality
SIO_000300: 3.156e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

GenotypeQuality
all individuals: 1118
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31680
bin: 7.5e0
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 121
bin: 8.25e1
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GenotypeQuality
all individuals: 56
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 5009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
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variant carriers: 1

GenotypeQuality
all individuals: 1796
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7774
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.592356687898089e-3
allele num: 628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7522
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.94715e5

VQSLOD
type: SiteQuality
SIO_000300: -1.794e0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.68e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.25e-1

FS
type: SiteQuality
SIO_000300: 2.251e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 3.178e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

GenotypeQuality
all individuals: 4818
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 3

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1410
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 1032
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8188
bin: 2.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 31
allele frequency: 4.290063659009134e-3
allele num: 7226
num of homozygotes: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.79e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

QD
type: SiteQuality
SIO_000300: 1.391e1

DP
type: SiteQuality
SIO_000300: 3.83421e5

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 7

GenotypeQuality
all individuals: 56
bin: 4.75e1
variant carriers: 13

GenotypeQuality
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bin: 7.5e0
variant carriers: 53

GenotypeQuality
all individuals: 288
bin: 3.25e1
variant carriers: 43

GenotypeQuality
all individuals: 882
bin: 6.75e1
variant carriers: 51

GenotypeQuality
all individuals: 259
bin: 7.25e1
variant carriers: 32

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 26

GenotypeQuality
all individuals: 184
bin: 7.75e1
variant carriers: 16

GenotypeQuality
all individuals: 76
bin: 9.25e1
variant carriers: 43

GenotypeQuality
all individuals: 626
bin: 9.75e1
variant carriers: 414

GenotypeQuality
all individuals: 7210
bin: 2.25e1
variant carriers: 66

GenotypeQuality
all individuals: 886
bin: 1.25e1
variant carriers: 46

GenotypeQuality
all individuals: 97
bin: 8.25e1
variant carriers: 17

Latino
type: Population
allele count: 9
allele frequency: 2.064220183486239e-2
allele num: 436
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 7.556675062972292e-3
allele num: 1588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 8.928571428571429e-2
allele num: 56
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

South Asian
type: Population
allele count: 92
allele frequency: 1.226012793176972e-2
allele num: 7504
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 293
allele frequency: 4.362715902322811e-2
allele num: 6716
num of homozygotes: 4

Other
type: Population
allele count: 4
allele frequency: 2.439024390243903e-2
allele num: 164
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 1.433e1

DP
type: SiteQuality
SIO_000300: 3.59038e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.76e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.43e0

GenotypeQuality
all individuals: 3702
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 628
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33259
bin: 7.5e0
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GenotypeQuality
all individuals: 2030
bin: 2.5e0
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GenotypeQuality
all individuals: 223
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 371
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GenotypeQuality
all individuals: 39
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GenotypeQuality
all individuals: 642
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.86697247706422e-4
allele num: 6976
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5856
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.486e0

QD
type: SiteQuality
SIO_000300: 1.459e1

FS
type: SiteQuality
SIO_000300: 2.275e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.023e0

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.829999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
type: SiteQuality
SIO_000300: 3.0853e5

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 9.25e1
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GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 140
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.645502645502645e-3
allele num: 378
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 3.00595e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.9e-2

FS
type: SiteQuality
SIO_000300: 3.059e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

QD
type: SiteQuality
SIO_000300: 3.35e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 2.520623281393217e-3
allele num: 4364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 2.09178e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.66e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
SIO_000300: -5.548999999999999e-1

FS
type: SiteQuality
SIO_000300: 7.78e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.869884575026233e-4
allele num: 3812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 950
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4844
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 100
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.8621e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

FS
type: SiteQuality
SIO_000300: 2.602e0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.950000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.630000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 31
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GenotypeQuality
all individuals: 216
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 918
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.0e-1
allele num: 10
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3756
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.147e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

FS
type: SiteQuality
SIO_000300: 4.141e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.14e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.3e-1

DP
type: SiteQuality
SIO_000300: 1.84378e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e0

QD
type: SiteQuality
SIO_000300: 8.06e0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.373042240151875e-4
allele num: 4214
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.668e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.51e-1

DP
type: SiteQuality
SIO_000300: 1.72678e5

QD
type: SiteQuality
SIO_000300: 6.32e0

VQSLOD
type: SiteQuality
SIO_000300: -3.977e-1

MQ
type: SiteQuality
SIO_000300: 5.829e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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bin: 8.75e1
variant carriers: 5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

African
type: Population
allele count: 65
allele frequency: 1.173285198555957e-1
allele num: 554
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7434
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.94e-2

QD
type: SiteQuality
SIO_000300: 1.66e1

DP
type: SiteQuality
SIO_000300: 1.99077e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.63e0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.59e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7486
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 6.215040397762585e-4
allele num: 3218
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 616
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 156
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.988e-1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.02704e5

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 7.03e-1

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.36e-2

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 7490
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3210
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.924e0

FS
type: SiteQuality
SIO_000300: 3.352e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.340000000000001e-2

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.0211e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.942e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.2e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.342281879194631e-4
allele num: 7450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 150
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.89e-1

DP
type: SiteQuality
SIO_000300: 1.94602e5

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e-1

QD
type: SiteQuality
SIO_000300: 9.449999999999999e0

FS
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VQSLOD
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MQRankSum
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InbreedingCoeff
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SIO_000300: -7.140000000000001e-2

BaseQRankSum
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SIO_000300: -1.083e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 128
num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
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allele frequency: 8.333333333333333e-3
allele num: 120
num of homozygotes: 0

East Asian
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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VQSLOD
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QD
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DP
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
allele num: 0
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African
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allele frequency: 3.198653198653199e-2
allele num: 594
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South Asian
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ClippingRankSum
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MQ
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DP
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 120
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 140
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European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
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allele frequency: 1.377410468319559e-4
allele num: 7260
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BaseQRankSum
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MQRankSum
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QD
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Finnish)
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allele frequency: NaN
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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MQRankSum
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DP
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SIO_000300: 1.62388e5

ClippingRankSum
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 7558
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.64e-2

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
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SIO_000300: 0.0e0

DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 5718
num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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African
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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MQ
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ReadPosRankSum
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FS
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 5812
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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East Asian
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

MQRankSum
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MQ
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BaseQRankSum
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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DP
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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Latino
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allele num: 420
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East Asian
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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FS
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QD
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MQRankSum
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ClippingRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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African
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European (Finnish)
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Latino
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Other
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ReadPosRankSum
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FS
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VQSLOD
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DP
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QD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQ
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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African
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ReadPosRankSum
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DP
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BaseQRankSum
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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MQ
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.851851851851852e-3
allele num: 540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8016
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.67496e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.29e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.880000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
all individuals: 203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3519
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2404
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1130
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7146
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.75e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.207e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

DP
type: SiteQuality
SIO_000300: 4.775e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.075e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

GenotypeQuality
all individuals: 455
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 19749
bin: 2.25e1
variant carriers: 3

GenotypeQuality
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bin: 3.25e1
variant carriers: 7

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 9

GenotypeQuality
all individuals: 199
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 3289
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2358
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 458
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1178
bin: 9.75e1
variant carriers: 52

GenotypeQuality
all individuals: 157
bin: 3.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

African
type: Population
allele count: 37
allele frequency: 2.415143603133159e-2
allele num: 1532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8096
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.74423710208562e-4
allele num: 7288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.215434083601286e-3
allele num: 622
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.56e-2

DP
type: SiteQuality
SIO_000300: 4.8629e5

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 677
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22660
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2406
bin: 1.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.9062e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.534e0

QD
type: SiteQuality
SIO_000300: 4.67e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.52e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

GenotypeQuality
all individuals: 624
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3407
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3467
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2338
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.36322869955157e-3
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1596
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 8.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.08e-2

FS
type: SiteQuality
SIO_000300: 6.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

DP
type: SiteQuality
SIO_000300: 5.08722e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.084e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 19850
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 610
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1137
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 920
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8218
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.075e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

DP
type: SiteQuality
SIO_000300: 5.13052e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.97e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -6.919999999999999e-1

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3492
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

QD
type: SiteQuality
SIO_000300: 1.196e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.387e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.75e-2

MQ
type: SiteQuality
SIO_000300: 5.866e1

FS
type: SiteQuality
SIO_000300: 6.64e0

DP
type: SiteQuality
SIO_000300: 5.25493e5

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

GenotypeQuality
all individuals: 781
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1148
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 633
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 965
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3533
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17642
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3502
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1061
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 207
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 7
allele frequency: 8.435767654856592e-4
allele num: 8298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1000
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.808988764044944e-3
allele num: 356
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.590000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.205e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.64e-2

QD
type: SiteQuality
SIO_000300: 1.27e1

MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

DP
type: SiteQuality
SIO_000300: 5.31814e5

GenotypeQuality
all individuals: 15709
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1146
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
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variant carriers: 0

GenotypeQuality
all individuals: 463
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variant carriers: 0

GenotypeQuality
all individuals: 26283
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3531
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.062925170068027e-4
allele num: 9408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.262e0

VQSLOD
type: SiteQuality
SIO_000300: 9.47e-1

QD
type: SiteQuality
SIO_000300: 1.528e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

DP
type: SiteQuality
SIO_000300: 5.50139e5

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 630
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3599
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2169
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15709
bin: 7.5e0
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GenotypeQuality
all individuals: 1146
bin: 9.75e1
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GenotypeQuality
all individuals: 458
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1084
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 5.50139e5

FS
type: SiteQuality
SIO_000300: 2.262e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-2

QD
type: SiteQuality
SIO_000300: 1.528e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
all individuals: 201
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1071
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3668
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1142
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.18962645729241e-4
allele num: 8406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.02e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.6093e5

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.46e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
all individuals: 1077
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 5.64708e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.751e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.294e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.28e-2

GenotypeQuality
all individuals: 1745
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1200
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 234
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.75927e5

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.92e-2

MQ
type: SiteQuality
SIO_000300: 6.351e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.238e-1

QD
type: SiteQuality
SIO_000300: 3.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30295
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1092
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12820
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.915e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.82e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 4.178e0

MQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

QD
type: SiteQuality
SIO_000300: 2.057e1

DP
type: SiteQuality
SIO_000300: 5.81067e5

GenotypeQuality
all individuals: 4219
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1506
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 638
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 7.22543352601156e-4
allele num: 1384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1486
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.25e-1

QD
type: SiteQuality
SIO_000300: 1.238e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.42e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.88e0

VQSLOD
type: SiteQuality
SIO_000300: 4.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

DP
type: SiteQuality
SIO_000300: 6.01035e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1408
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32159
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variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.41643059490085e-3
allele num: 706
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.954102920723226e-4
allele num: 1438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8776
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.508566275924256e-4
allele num: 2218
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.06548e5

BaseQRankSum
type: SiteQuality
SIO_000300: 9.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.33e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.65e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

GenotypeQuality
all individuals: 465
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4800
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.25e1
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GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 32
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variant carriers: 0

GenotypeQuality
all individuals: 481
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variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1664
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.160246312473149e-5
allele num: 13966
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8854
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

DP
type: SiteQuality
SIO_000300: 6.23081e5

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

QD
type: SiteQuality
SIO_000300: 1.464e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.04e-2

GenotypeQuality
all individuals: 1497
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 8656
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1592
bin: 1.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1139
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 483
bin: 7.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.20627261761158e-3
allele num: 1658
num of homozygotes: 0

African
type: Population
allele count: 47
allele frequency: 1.913680781758958e-2
allele num: 2456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14370
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.92e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.98e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-1

DP
type: SiteQuality
SIO_000300: 6.29737e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

QD
type: SiteQuality
SIO_000300: 1.215e1

GenotypeQuality
all individuals: 265
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 308
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 1162
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 290
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 936
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.238236750866766e-4
allele num: 16152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1864
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.61e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.325e0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.79e-1

QD
type: SiteQuality
SIO_000300: 5.83e0

DP
type: SiteQuality
SIO_000300: 6.53338e5

GenotypeQuality
all individuals: 6698
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2169
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GenotypeQuality
all individuals: 214
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GenotypeQuality
all individuals: 414
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GenotypeQuality
all individuals: 934
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
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variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1851
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.018e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.98e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

DP
type: SiteQuality
SIO_000300: 6.5756e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.59e-2

GenotypeQuality
all individuals: 1887
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35491
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1833
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6746
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9366
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 4.803073967339097e-4
allele num: 2082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.395489370885939e-5
allele num: 18534
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.521e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.44e-2

FS
type: SiteQuality
SIO_000300: 2.208e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

DP
type: SiteQuality
SIO_000300: 6.89883e5

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

QD
type: SiteQuality
SIO_000300: 1.279e1

GenotypeQuality
all individuals: 253
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1893
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4930
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7020
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35539
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1152
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.34001336005344e-4
allele num: 2994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2130
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

DP
type: SiteQuality
SIO_000300: 6.95519e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.513e1

VQSLOD
type: SiteQuality
SIO_000300: 7.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1893
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1877
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4930
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19130
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.064282673478076e-4
allele num: 9396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1152
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-2

DP
type: SiteQuality
SIO_000300: 6.95519e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.79e-1

QD
type: SiteQuality
SIO_000300: 1.513e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1969
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1069
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20722
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.045150501672241e-4
allele num: 9568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2570
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.18e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.766e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.268e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.668e0

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

DP
type: SiteQuality
SIO_000300: 7.10087e5

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
all individuals: 381
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 478
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1101
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7520
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2658
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1284
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.86e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

DP
type: SiteQuality
SIO_000300: 7.13308e5

VQSLOD
type: SiteQuality
SIO_000300: -2.361e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.881e0