14-62211393-TATTTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211393
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211387
    reference: chr 14
allele count: 1
allele frequency: 1.29269112438274e-5
allele num: 77358
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2166-25_2166-20delTCATTT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2094-25_2094-20delTCATTT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2094-25_2094-20delTCATTT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1917-25_1917-20delTCATTT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2097-25_2097-20delTCATTT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19867
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13760
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6600
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: TATTTTC
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ

14-62211399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211399
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211399
    reference: chr 14
allele count: 1
allele frequency: 1.20531301979124e-5
allele num: 82966
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1917-24C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2094-24C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2094-24C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2097-24C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10396C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2166-24C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6204G>A
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3487
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16987
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

14-62211403-TAGAATTTTTTTCTTTTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211403
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211386
    reference: chr 14
allele count: 1
allele frequency: 1.128489854876205e-5
allele num: 88614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15590
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32286
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15064
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2708
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
hgvs: c.2166-15_2167delTTTTTTTCTTTTCAGAA
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: TAGAATTTTTTTCTTTTC
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

14-62211405-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211405
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211405
    reference: chr 14
allele count: 1
allele frequency: 1.093421973407978e-5
allele num: 91456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1917-18G>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2166-18G>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2094-18G>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10402G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2094-18G>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2097-18G>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6198C>G
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2507
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

14-62211411-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211411
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211411
    reference: chr 14
allele count: 1
allele frequency: 1.000420176474119e-5
allele num: 99958
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6192A>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2094-12T>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1917-12T>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10408T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2097-12T>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2094-12T>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2166-12T>G
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41418
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD

14-62211424-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211424
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211424
    reference: chr 14
allele count: 1
allele frequency: 8.636175210722675e-6
allele num: 115792
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1918A>G
  hgvsp: ENSP00000451696.1:p.Thr640Ala
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10421A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6179T>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2095A>G
  hgvsp: ENSP00000338018.4:p.Thr699Ala
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2167A>G
  hgvsp: ENSP00000437955.1:p.Thr723Ala
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2098A>G
  hgvsp: ENSP00000378446.1:p.Thr700Ala
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2095A>G
  hgvsp: ENSP00000323326.6:p.Thr699Ala
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47200
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr723Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-62211428-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211428
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211428
    reference: chr 14
allele count: 3
allele frequency: 2.54911290870777e-5
allele num: 117688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2099C>T
  hgvsp: ENSP00000323326.6:p.Thr700Ile
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2171C>T
  hgvsp: ENSP00000437955.1:p.Thr724Ile
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1922C>T
  hgvsp: ENSP00000451696.1:p.Thr641Ile
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2102C>T
  hgvsp: ENSP00000378446.1:p.Thr701Ile
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10425C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2099C>T
  hgvsp: ENSP00000338018.4:p.Thr700Ile
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6175G>A
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47843
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr724Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD

14-62211435-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211435
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211435
    reference: chr 14
allele count: 3
allele frequency: 2.51475321888412e-5
allele num: 119296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1929T>C
  hgvsp: ENST00000557538.1:c.1929T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2106T>C
  hgvsp: ENST00000337138.4:c.2106T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2106T>C
  hgvsp: ENST00000323441.6:c.2106T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2178T>C
  hgvsp: ENST00000539097.1:c.2178T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6168A>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2109T>C
  hgvsp: ENST00000394997.1:c.2109T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10432T>C
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48324
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3086
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54070
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro726Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

14-62211440-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211440
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211440
    reference: chr 14
allele count: 1
allele frequency: 8.335834083558401e-6
allele num: 119964
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2183A>T
  hgvsp: ENSP00000437955.1:p.Glu728Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2111A>T
  hgvsp: ENSP00000338018.4:p.Glu704Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6163T>A
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10437A>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2111A>T
  hgvsp: ENSP00000323326.6:p.Glu704Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1934A>T
  hgvsp: ENSP00000451696.1:p.Glu645Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2114A>T
  hgvsp: ENSP00000378446.1:p.Glu705Val
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54455
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu728Val
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD

14-62211457-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211457
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211457
    reference: chr 14
allele count: 1
allele frequency: 8.27034090345204e-6
allele num: 120914
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2128A>G
  hgvsp: ENSP00000338018.4:p.Ile710Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2131A>G
  hgvsp: ENSP00000378446.1:p.Ile711Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2128A>G
  hgvsp: ENSP00000323326.6:p.Ile710Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6146T>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1951A>G
  hgvsp: ENSP00000451696.1:p.Ile651Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2200A>G
  hgvsp: ENSP00000437955.1:p.Ile734Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10454A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile734Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

14-62211458-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211458
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211458
    reference: chr 14
allele count: 1
allele frequency: 8.269656974628692e-6
allele num: 120924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1952T>C
  hgvsp: ENSP00000451696.1:p.Ile651Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2129T>C
  hgvsp: ENSP00000338018.4:p.Ile710Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2129T>C
  hgvsp: ENSP00000323326.6:p.Ile710Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2132T>C
  hgvsp: ENSP00000378446.1:p.Ile711Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2201T>C
  hgvsp: ENSP00000437955.1:p.Ile734Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6145A>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10455T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile734Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/14-62211460-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211460
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211460
    reference: chr 14
allele count: 1
allele frequency: 8.267059076404159e-6
allele num: 120962
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2131C>A
  hgvsp: ENSP00000323326.6:p.Leu711Ile
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1954C>A
  hgvsp: ENSP00000451696.1:p.Leu652Ile
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2131C>A
  hgvsp: ENSP00000338018.4:p.Leu711Ile
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2203C>A
  hgvsp: ENSP00000437955.1:p.Leu735Ile
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2134C>A
  hgvsp: ENSP00000378446.1:p.Leu712Ile
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6143G>T
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10457C>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55058
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu735Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

14-62211464-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211464
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211464
    reference: chr 14
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2135C>G
  hgvsp: ENSP00000323326.6:p.Ala712Gly
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6139G>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2135C>G
  hgvsp: ENSP00000338018.4:p.Ala712Gly
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1958C>G
  hgvsp: ENSP00000451696.1:p.Ala653Gly
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2138C>G
  hgvsp: ENSP00000378446.1:p.Ala713Gly
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2207C>G
  hgvsp: ENSP00000437955.1:p.Ala736Gly
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10461C>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48539
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55127
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala736Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS

14-62211471-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211471
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211471
    reference: chr 14
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2214G>C
  hgvsp: ENSP00000437955.1:p.Gln738His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10468G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2142G>C
  hgvsp: ENSP00000323326.6:p.Gln714His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1965G>C
  hgvsp: ENSP00000451696.1:p.Gln655His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2145G>C
  hgvsp: ENSP00000378446.1:p.Gln715His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2142G>C
  hgvsp: ENSP00000338018.4:p.Gln714His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6132C>G
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln738His
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

14-62211471-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211471
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211471
    reference: chr 14
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2214G>T
  hgvsp: ENSP00000437955.1:p.Gln738His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6132C>A
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2142G>T
  hgvsp: ENSP00000323326.6:p.Gln714His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1965G>T
  hgvsp: ENSP00000451696.1:p.Gln655His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2142G>T
  hgvsp: ENSP00000338018.4:p.Gln714His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2145G>T
  hgvsp: ENSP00000378446.1:p.Gln715His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10468G>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln738His
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

14-62211473-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211473
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211473
    reference: chr 14
allele count: 1
allele frequency: 8.25559316436886e-6
allele num: 121130
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2144A>G
  hgvsp: ENSP00000323326.6:p.Asn715Ser
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10470A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6130T>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1967A>G
  hgvsp: ENSP00000451696.1:p.Asn656Ser
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2216A>G
  hgvsp: ENSP00000437955.1:p.Asn739Ser
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2147A>G
  hgvsp: ENSP00000378446.1:p.Asn716Ser
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2144A>G
  hgvsp: ENSP00000338018.4:p.Asn715Ser
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3211
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn739Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-62211475-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211475
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211475
    reference: chr 14
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6128C>T
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1969G>A
  hgvsp: ENSP00000451696.1:p.Ala657Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2146G>A
  hgvsp: ENSP00000323326.6:p.Ala716Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2149G>A
  hgvsp: ENSP00000378446.1:p.Ala717Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2146G>A
  hgvsp: ENSP00000338018.4:p.Ala716Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2218G>A
  hgvsp: ENSP00000437955.1:p.Ala740Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10472G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3206
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala740Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

14-62211480-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211480
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211480
    reference: chr 14
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2223G>C
  hgvsp: ENSP00000437955.1:p.Gln741His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6123C>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10477G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2151G>C
  hgvsp: ENSP00000323326.6:p.Gln717His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2151G>C
  hgvsp: ENSP00000338018.4:p.Gln717His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2154G>C
  hgvsp: ENSP00000378446.1:p.Gln718His
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1974G>C
  hgvsp: ENSP00000451696.1:p.Gln658His
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8101
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gln741His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

14-62211502-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211502
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211502
    reference: chr 14
allele count: 1
allele frequency: 8.257638315441784e-6
allele num: 121100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2173G>T
  hgvsp: ENSP00000338018.4:p.Asp725Tyr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6101C>A
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2176G>T
  hgvsp: ENSP00000378446.1:p.Asp726Tyr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2173G>T
  hgvsp: ENSP00000323326.6:p.Asp725Tyr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10499G>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2245G>T
  hgvsp: ENSP00000437955.1:p.Asp749Tyr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.1996G>T
  hgvsp: ENSP00000451696.1:p.Asp666Tyr
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8160
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54930
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3168
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp749Tyr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD

14-62211509-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211509
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211509
    reference: chr 14
allele count: 1
allele frequency: 8.26255081468751e-6
allele num: 121028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2003C>T
  hgvsp: ENSP00000451696.1:p.Ser668Leu
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2180C>T
  hgvsp: ENSP00000338018.4:p.Ser727Leu
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2180C>T
  hgvsp: ENSP00000323326.6:p.Ser727Leu
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2183C>T
  hgvsp: ENSP00000378446.1:p.Ser728Leu
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6094G>A
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2252C>T
  hgvsp: ENSP00000437955.1:p.Ser751Leu
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10506C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8193
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54761
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser751Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

14-62211510-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211510
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211510
    reference: chr 14
allele count: 1
allele frequency: 8.263779852904718e-6
allele num: 121010
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2253A>G
  hgvsp: ENST00000539097.1:c.2253A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2184A>G
  hgvsp: ENST00000394997.1:c.2184A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6093T>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10507A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2181A>G
  hgvsp: ENST00000337138.4:c.2181A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2181A>G
  hgvsp: ENST00000323441.6:c.2181A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2004A>G
  hgvsp: ENST00000557538.1:c.2004A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3163
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser751Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/14-62211510-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211510
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211510
    reference: chr 14
allele count: 1
allele frequency: 8.263779852904718e-6
allele num: 121010
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2181A>C
  hgvsp: ENST00000337138.4:c.2181A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6093T>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2184A>C
  hgvsp: ENST00000394997.1:c.2184A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2004A>C
  hgvsp: ENST00000557538.1:c.2004A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2181A>C
  hgvsp: ENST00000323441.6:c.2181A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10507A>C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2253A>C
  hgvsp: ENST00000539097.1:c.2253A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser751Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

14-62211521-C-CAGTAGGAATTGTAAGTATGAGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211521
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211543
    reference: chr 14
allele count: 4
allele frequency: 3.308902602451897e-5
allele num: 120886
alternate allele: CAGTAGGAATTGTAAGTATGAGT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47055
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8254
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3141
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53948
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP

14-62211521-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211521
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211521
    reference: chr 14
allele count: 1
allele frequency: 8.272256506129742e-6
allele num: 120886
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2264C>T
  hgvsp: ENSP00000437955.1:p.Ala755Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10518C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6082G>A
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2192C>T
  hgvsp: ENSP00000338018.4:p.Ala731Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2192C>T
  hgvsp: ENSP00000323326.6:p.Ala731Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2195C>T
  hgvsp: ENSP00000378446.1:p.Ala732Val
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2015C>T
  hgvsp: ENSP00000451696.1:p.Ala672Val
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53948
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala755Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-62211530-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211530
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211530
    reference: chr 14
allele count: 1
allele frequency: 8.283357078956959e-6
allele num: 120724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2204T>C
  hgvsp: ENSP00000378446.1:p.Ile735Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2273T>C
  hgvsp: ENSP00000437955.1:p.Ile758Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10527T>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2201T>C
  hgvsp: ENSP00000338018.4:p.Ile734Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2024T>C
  hgvsp: ENSP00000451696.1:p.Ile675Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2201T>C
  hgvsp: ENSP00000323326.6:p.Ile734Thr
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6073A>G
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8207
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile758Thr
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

14-62211546-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211546
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211546
    reference: chr 14
allele count: 1
allele frequency: 8.318913882603488e-6
allele num: 120208
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+15T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6057A>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+15T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+15T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+15T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10543T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+15T>C
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44649
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7926
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

14-62211564-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211564
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211564
    reference: chr 14
allele count: 1
allele frequency: 8.594166279929183e-6
allele num: 116358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+33C>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+33C>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10561C>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6039G>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+33C>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+33C>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+33C>G
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27884
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14677
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4810
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4150
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/14-62211566-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211566
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211566
    reference: chr 14
allele count: 3
allele frequency: 2.600419534351542e-5
allele num: 115366
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10563A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+35A>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+35A>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+35A>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+35A>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6037T>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+35A>C
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6269
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7223
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26837
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5348
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1624
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25759
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

14-62211572-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211572
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211572
    reference: chr 14
allele count: 1
allele frequency: 9.857849805800359e-6
allele num: 101442
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10569C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+41C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+41C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+41C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6031G>A
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+41C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+41C>T
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7515
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13944
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10143
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4228
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22412
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5807
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7526
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2477
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

14-62211574-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211574
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211574
    reference: chr 14
allele count: 6
allele frequency: 6.421782686873876e-5
allele num: 93432
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+43A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+43A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+43A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10571A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+43A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+43A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6029T>C
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14051
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4804
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17656
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7540
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3535
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4238
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4555
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum

14-62211576-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211576
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211576
    reference: chr 14
allele count: 1
allele frequency: 1.238083446824316e-5
allele num: 80770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+45T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+45T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+45T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6027A>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10573T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+45T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+45T>C
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16423
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4839
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4245
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5266
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4826
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12709
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10152
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1672
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

14-62211577-T-TTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211577
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211579
    reference: chr 14
allele count: 9
allele frequency: 1.148193508879363e-4
allele num: 78384
alternate allele: TTG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+46_2202+47insTG
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+46_2202+47insTG
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+46_2025+47insTG
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10574_148+10575insTG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+46_2205+47insTG
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+46_2274+47insTG
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6025_213+6026insCA
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9541
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4328
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4791
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

14-62211577-TCGTG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211577
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211573
    reference: chr 14
allele count: 1
allele frequency: 1.275770565421515e-5
allele num: 78384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+47_2025+50delCGTG
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10575_148+10578delCGTG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+47_2202+50delCGTG
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+47_2205+50delCGTG
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+47_2202+50delCGTG
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+47_2274+50delCGTG
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6022_213+6025delCACG
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14151
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16319
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4572
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4328
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12270
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7348
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: TCGTG
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

14-62211578-C-CGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211578
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211580
    reference: chr 14
allele count: 745
allele frequency: 1.29601280356273e-2
allele num: 57484
alternate allele: CGT
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10608_148+10609dupGT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+80_2274+81dupGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6023_213+6024dupAC
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+80_2202+81dupGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+80_2202+81dupGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+80_2205+81dupGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+80_2025+81dupGT
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 2.25e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 1.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 20901
  bin: 1.25e1
  variant carriers: 360
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21561
  bin: 7.5e0
  variant carriers: 297
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 2.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 4224
  bin: 2.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 6.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 8.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 8304
  bin: 2.5e0
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 6.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 7.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 5.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 3.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.5e0
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 2.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.75e1
  variant carriers: 58
num of homozygotes: 3
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

14-62211578-CGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211578
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211576
    reference: chr 14
allele count: 4229
allele frequency: 7.3568297265326e-2
allele num: 57484
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10608_148+10609delGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+80_2205+81delGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6023_213+6024delAC
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+80_2274+81delGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+80_2025+81delGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+80_2202+81delGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+80_2202+81delGT
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 20901
  bin: 1.25e1
  variant carriers: 2420
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 1.75e1
  variant carriers: 980
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.5e0
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 21561
  bin: 7.5e0
  variant carriers: 1993
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 2.25e1
  variant carriers: 434
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 2.75e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 2.25e1
  variant carriers: 357
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 6.75e1
  variant carriers: 287
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 6.25e1
  variant carriers: 208
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.5e0
  variant carriers: 166
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.75e1
  variant carriers: 375
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 5.25e1
  variant carriers: 114
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 4.25e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 3.25e1
  variant carriers: 145
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 1.25e1
  variant carriers: 211
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 230
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 3.75e1
  variant carriers: 130
num of homozygotes: 86
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: CGT
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

14-62211578-CGTGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211578
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211574
    reference: chr 14
allele count: 30728
allele frequency: 5.3454874399833e-1
allele num: 57484
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6021_213+6024delACAC
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+78_2274+81delGTGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+78_2025+81delGTGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+78_2205+81delGTGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+78_2202+81delGTGT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10606_148+10609delGTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+78_2202+81delGTGT
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 1.75e1
  variant carriers: 5667
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 671
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 256
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.5e0
  variant carriers: 1472
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 2.75e1
  variant carriers: 1120
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 2.25e1
  variant carriers: 2174
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 275
genotype depth: GenotypeDepth
  all individuals: 21561
  bin: 7.5e0
  variant carriers: 16246
genotype depth: GenotypeDepth
  all individuals: 20901
  bin: 1.25e1
  variant carriers: 15416
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 441
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 85
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 5.25e1
  variant carriers: 856
genotype quality: GenotypeQuality
  all individuals: 4224
  bin: 2.75e1
  variant carriers: 3525
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 6.75e1
  variant carriers: 1128
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.75e1
  variant carriers: 1349
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 4.75e1
  variant carriers: 937
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 2.25e1
  variant carriers: 3899
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 6.25e1
  variant carriers: 914
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 1.75e1
  variant carriers: 2805
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 3.25e1
  variant carriers: 3110
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.5e0
  variant carriers: 829
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 935
num of homozygotes: 5560
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: CGTGT
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

14-62211578-CGTGTGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211578
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211572
    reference: chr 14
allele count: 13222
allele frequency: 2.300118293786097e-1
allele num: 57484
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 364
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 2.25e1
  variant carriers: 1207
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 2.75e1
  variant carriers: 582
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 146
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.5e0
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 251
genotype depth: GenotypeDepth
  all individuals: 20901
  bin: 1.25e1
  variant carriers: 7237
genotype depth: GenotypeDepth
  all individuals: 21561
  bin: 7.5e0
  variant carriers: 4345
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 190
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 1.75e1
  variant carriers: 3261
genotype quality: GenotypeQuality
  all individuals: 4224
  bin: 2.75e1
  variant carriers: 523
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 1.75e1
  variant carriers: 367
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 4.25e1
  variant carriers: 267
genotype quality: GenotypeQuality
  all individuals: 8304
  bin: 2.5e0
  variant carriers: 511
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 2.25e1
  variant carriers: 484
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 6.75e1
  variant carriers: 790
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 6.25e1
  variant carriers: 555
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 7.25e1
  variant carriers: 867
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 3.25e1
  variant carriers: 401
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 8.25e1
  variant carriers: 642
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 4.75e1
  variant carriers: 307
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.5e0
  variant carriers: 380
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.75e1
  variant carriers: 951
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 5.75e1
  variant carriers: 418
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 5.25e1
  variant carriers: 349
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 701
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 3.75e1
  variant carriers: 326
genotype quality: GenotypeQuality
  all individuals: 16671
  bin: 9.75e1
  variant carriers: 8340
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 7.75e1
  variant carriers: 822
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 1.25e1
  variant carriers: 259
num of homozygotes: 236
population: South Asian
  type: Population
  allele count: 1811
  allele frequency: 3.086230402181322e-1
  allele num: 5868
  num of homozygotes: 103
population: Latino
  type: Population
  allele count: 1106
  allele frequency: 2.271980279375514e-1
  allele num: 4868
  num of homozygotes: 5
population: East Asian
  type: Population
  allele count: 1433
  allele frequency: 3.62968591691996e-1
  allele num: 3948
  num of homozygotes: 72
population: African
  type: Population
  allele count: 841
  allele frequency: 1.460069444444445e-1
  allele num: 5760
  num of homozygotes: 9
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: CGTGTGT
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

14-62211578-CGTGTGTGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211578
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211570
    reference: chr 14
allele count: 1311
allele frequency: 2.28063461137012e-2
allele num: 57484
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 2.25e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 1.75e1
  variant carriers: 363
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 2.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 21561
  bin: 7.5e0
  variant carriers: 479
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20901
  bin: 1.25e1
  variant carriers: 879
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 6.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 1.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 6.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 4.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 1.25e1
  variant carriers: 74
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 2.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 4224
  bin: 2.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.5e0
  variant carriers: 90
genotype quality: GenotypeQuality
  all individuals: 8304
  bin: 2.5e0
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 5.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 7.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 7.25e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 16671
  bin: 9.75e1
  variant carriers: 1077
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 3.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 4.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 5.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 3.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 8.25e1
  variant carriers: 34
num of homozygotes: 21
population: African
  type: Population
  allele count: 462
  allele frequency: 8.020833333333334e-2
  allele num: 5760
  num of homozygotes: 19
population: Other
  type: Population
  allele count: 4
  allele frequency: 8.298755186721992e-3
  allele num: 482
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 208
  allele frequency: 3.54464894342195e-2
  allele num: 5868
  num of homozygotes: 1
population: East Asian
  type: Population
  allele count: 146
  allele frequency: 3.69807497467072e-2
  allele num: 3948
  num of homozygotes: 1
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: CGTGTGTGT
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

14-62211578-CGTGTGTGTGTGTGTGTGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211578
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211560
    reference: chr 14
allele count: 193
allele frequency: 3.357455987753114e-3
allele num: 57484
alternate allele: C
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 1.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20901
  bin: 1.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 21561
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3089
  bin: 2.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4224
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8304
  bin: 2.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16671
  bin: 9.75e1
  variant carriers: 188
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 2
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3948
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4238
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 12
  allele frequency: 3.712871287128713e-4
  allele num: 32320
  num of homozygotes: 0
population: African
  type: Population
  allele count: 160
  allele frequency: 2.777777777777778e-2
  allele num: 5760
  num of homozygotes: 2
population: Latino
population: South Asian
population: Other
reference allele: CGTGTGTGTGTGTGTGTGT
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

14-62211581-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211581
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211581
    reference: chr 14
allele count: 6
allele frequency: 7.142857142857143e-3
allele num: 840
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6022C>T
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10578G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+50G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+50G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+50G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+50G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+50G>A
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3475
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9049
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 3
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD

14-62211583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62211583
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62211583
    reference: chr 14
allele count: 5
allele frequency: 1.481920569057498e-3
allele num: 3374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2202+52G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+10580G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2274+52G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2025+52G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+6020C>T
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+52G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2205+52G>A
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9242
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

14-62212254-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212254
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212254
    reference: chr 14
allele count: 2
allele frequency: 3.928655614048873e-5
allele num: 50908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+723G>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5349C>A
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-155G>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-155G>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-155G>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-155G>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11251G>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25749
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3665
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5514
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4041
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3876
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1837
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

14-62212259-CAAAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212259
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212255
    reference: chr 14
allele count: 0
allele frequency: 0.0e0
allele num: 51364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+731_2202+734delATAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-147_2275-144delATAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-147_2203-144delATAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-147_2026-144delATAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5340_213+5343delATTT
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11259_148+11262delATAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-147_2206-144delATAA
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26036
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6184
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6719
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: CAAAT
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

14-62212262-ATAACT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212262
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212257
    reference: chr 14
allele count: 54
allele frequency: 1.034641324340895e-3
allele num: 52192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-143_2206-139delCTTAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-143_2275-139delCTTAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5336_213+5340delAGTTA
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-143_2026-139delCTTAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-143_2203-139delCTTAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+735_2202+739delCTTAA
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7344
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3265
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 26369
  bin: 7.5e0
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16264
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2705
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5920
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2955
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22990
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6751
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: ATAACT
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

14-62212268-TAAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212268
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212265
    reference: chr 14
allele count: 16
allele frequency: 3.03156618287923e-4
allele num: 52778
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5332_213+5334delCTT
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11268_148+11270delGAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-138_2026-136delGAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-138_2275-136delGAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+740_2202+742delGAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-138_2203-136delGAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-138_2206-136delGAA
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 27036
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15826
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5376
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3442
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4037
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5505
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: TAAG
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

14-62212268-TAAGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212268
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212264
    reference: chr 14
allele count: 5
allele frequency: 9.473644321497593e-5
allele num: 52778
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-135_2026-132delAGAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-135_2206-132delAGAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11271_148+11274delAGAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+743_2202+746delAGAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-135_2203-132delAGAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5331_213+5334delTCTT
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-135_2275-132delAGAA
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27036
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15826
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5376
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3442
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5505
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1865
  bin: 9.75e1
  variant carriers: 5
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: TAAGA
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

14-62212293-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212293
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212293
    reference: chr 14
allele count: 1
allele frequency: 1.575944778894947e-5
allele num: 63454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-116G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11290G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-116G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5310C>T
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+762G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-116G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-116G>A
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2504
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4302
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12993
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4192
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

14-62212294-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212294
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212294
    reference: chr 14
allele count: 5
allele frequency: 7.784524365561264e-5
allele num: 64230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-115G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+763G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11291G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-115G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-115G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-115G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5309C>T
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14759
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25517
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13334
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25959
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

14-62212296-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212296
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212296
    reference: chr 14
allele count: 1955
allele frequency: 2.901368317948413e-2
allele num: 67382
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11293A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-113A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+765A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5307T>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-113A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-113A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-113A>G
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24143
  bin: 7.5e0
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 1.75e1
  variant carriers: 547
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15239
  bin: 2.25e1
  variant carriers: 371
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 3.25e1
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 2.75e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 10669
  bin: 1.25e1
  variant carriers: 507
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 8.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 5.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 8.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 7.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 3877
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 7.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 3659
  bin: 9.75e1
  variant carriers: 1862
genotype quality: GenotypeQuality
  all individuals: 3997
  bin: 3.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1863
  bin: 3.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 4.75e1
  variant carriers: 13
num of homozygotes: 26
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

14-62212302-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212302
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212301
    reference: chr 14
allele count: 1
allele frequency: 1.376765702012831e-5
allele num: 72634
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-105delA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+773delA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5300delT
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-105delA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-105delA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11301delA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-105delA
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3498
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3614
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22742
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: TA
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

14-62212314-TATA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212314
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212311
    reference: chr 14
allele count: 238
allele frequency: 2.799143791310893e-3
allele num: 85026
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-92_2275-90delAAT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11314_148+11316delAAT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-92_2203-90delAAT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-92_2206-90delAAT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+786_2202+788delAAT
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5286_213+5288delTAT
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-92_2026-90delAAT
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 1.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 2.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 16687
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6425
  bin: 1.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26607
  bin: 2.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 17334
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 2
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: TATA
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

14-62212317-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212317
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212317
    reference: chr 14
allele count: 1
allele frequency: 1.145265472536534e-5
allele num: 87316
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-92A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-92A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+786A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11314A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-92A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5286T>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-92A>G
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28217
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15445
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2318
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16000
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25746
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

14-62212319-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212319
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212319
    reference: chr 14
allele count: 3
allele frequency: 3.329264232604594e-5
allele num: 90110
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5284A>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-90T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+788T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-90T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-90T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11316T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-90T>C
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5336
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29646
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14530
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28184
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum

14-62212321-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212321
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212321
    reference: chr 14
allele count: 12
allele frequency: 1.303695978097908e-4
allele num: 92046
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+790T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5282A>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-88T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-88T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-88T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11318T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-88T>C
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4970
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13638
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30741
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3173
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14231
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1782
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

14-62212324-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212324
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212324
    reference: chr 14
allele count: 1
allele frequency: 1.057060104437538e-5
allele num: 94602
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+793T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-85T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-85T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-85T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11321T>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5279A>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-85T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.2T>C
  variant of: http://identifiers.org/hgnc/4910
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3357
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12976
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1747
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

14-62212333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212333
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212333
    reference: chr 14
allele count: 1
allele frequency: 9.83477576711251e-6
allele num: 101680
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-76C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-76C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-76C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.11C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-76C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11330C>T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5270G>A
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+802C>T
  variant of: http://identifiers.org/hgnc/4910
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3867
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34829
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9573
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

14-62212341-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212341
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212341
    reference: chr 14
allele count: 4
allele frequency: 3.713744568648568e-5
allele num: 107708
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-68T>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-68T>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.19T>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+810T>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5262A>T
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-68T>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-68T>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11338T>A
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38175
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37549
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

14-62212359-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212359
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212360
    reference: chr 14
allele count: 161
allele frequency: 1.53283698611878e-3
allele num: 105034
alternate allele: TA
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5243dupT
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+838dupA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-40dupA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.47dupA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-40dupA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-40dupA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-40dupA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11366dupA
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 2.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 9017
  bin: 3.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 1.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 10466
  bin: 3.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 2.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3579
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 3.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 1.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4630
  bin: 2.5e0
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 8979
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 2.25e1
  variant carriers: 36
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

14-62212359-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212359
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212358
    reference: chr 14
allele count: 319
allele frequency: 3.037111792371994e-3
allele num: 105034
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-40delA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11366delA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-40delA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-40delA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+838delA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5243delT
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.47delA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-40delA
  variant of: http://identifiers.org/hgnc/4910
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 1.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 9017
  bin: 3.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 2.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 10466
  bin: 3.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 4.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 4.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 2.25e1
  variant carriers: 98
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 9.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 3.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 7.5e0
  variant carriers: 56
genotype quality: GenotypeQuality
  all individuals: 12145
  bin: 9.75e1
  variant carriers: 62
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 1.25e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1754
  bin: 4.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 8979
  bin: 6.25e1
  variant carriers: 8
num of homozygotes: 1
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: TA
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

14-62212359-TAAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212359
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212356
    reference: chr 14
allele count: 1
allele frequency: 9.52072662185578e-6
allele num: 105034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.45_47delAAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-42_2206-40delAAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11364_148+11366delAAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-42_2026-40delAAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5241_213+5243delTTT
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-42_2275-40delAAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+836_2202+838delAAA
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-42_2203-40delAAA
  variant of: http://identifiers.org/hgnc/4910
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4838
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1754
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: TAAA
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

14-62212361-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212361
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212361
    reference: chr 14
allele count: 1
allele frequency: 8.687795385043092e-6
allele num: 115104
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.39A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5242T>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+830A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-48A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-48A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-48A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-48A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11358A>G
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2730
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6535
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

14-62212366-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212366
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212366
    reference: chr 14
allele count: 1
allele frequency: 8.279653579294243e-6
allele num: 120778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+835A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-43A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.44A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-43A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-43A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-43A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11363A>G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5237T>C
  variant of: http://identifiers.org/hgnc/43015
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3053
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4346
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

14-62212375-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212375
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212375
    reference: chr 14
allele count: 3
allele frequency: 2.483320364882539e-5
allele num: 120806
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-34C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-34C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5228G>A
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-34C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+844C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.53C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-34C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11372C>T
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8665
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3881
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4329
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

14-62212378-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212378
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212378
    reference: chr 14
allele count: 1
allele frequency: 8.269246671628215e-6
allele num: 120930
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11375A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-31A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-31A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-31A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5225T>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-31A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.56A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+847A>G
  variant of: http://identifiers.org/hgnc/4910
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11743
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3054
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14408
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18605
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

14-62212379-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212379
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212379
    reference: chr 14
allele count: 1
allele frequency: 8.269930532583527e-6
allele num: 120920
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11376C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+848C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-30C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-30C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5224G>A
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.57C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-30C>T
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-30C>T
  variant of: http://identifiers.org/hgnc/4910
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14407
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4331
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7853
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

14-62212383-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212383
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212383
    reference: chr 14
allele count: 2
allele frequency: 1.652755970580944e-5
allele num: 121010
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+852A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.61A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-26A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-26A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5220T>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-26A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-26A>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11380A>G
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13741
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7881
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

14-62212386-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212386
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212386
    reference: chr 14
allele count: 1
allele frequency: 8.261731658955718e-6
allele num: 121040
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-23T>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-23T>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+855T>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5217A>C
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-23T>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.64T>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-23T>G
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11383T>G
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6571
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7893
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19032
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3888
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14405
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

14-62212395-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212395
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212395
    reference: chr 14
allele count: 1
allele frequency: 8.253549026081216e-6
allele num: 121160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-14T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-14T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+864T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.73T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-14T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-14T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11392T>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5208A>G
  variant of: http://identifiers.org/hgnc/43015
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13837
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11778
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3054
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5157
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum

14-62212402-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212402
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212402
    reference: chr 14
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11399T>C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2206-7T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.80T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2275-7T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5201A>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2026-7T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2203-7T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+871T>C
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3887
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: c.2275-7T>C
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

14-62212410-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212410
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212410
    reference: chr 14
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+879G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2276G>A
  hgvsp: ENSP00000437955.1:p.Gly759Glu
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2204G>A
  hgvsp: ENSP00000338018.4:p.Gly735Glu
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.88G>A
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2207G>A
  hgvsp: ENSP00000378446.1:p.Gly736Glu
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2027G>A
  hgvsp: ENSP00000451696.1:p.Gly676Glu
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11407G>A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5193C>T
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4332
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly759Glu
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/14-62212412-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212412
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212412
    reference: chr 14
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+881A>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2278A>C
  hgvsp: ENSP00000437955.1:p.Thr760Pro
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2206A>C
  hgvsp: ENSP00000338018.4:p.Thr736Pro
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2209A>C
  hgvsp: ENSP00000378446.1:p.Thr737Pro
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.90A>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2029A>C
  hgvsp: ENSP00000451696.1:p.Thr677Pro
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11409A>C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5191T>G
  variant of: http://identifiers.org/hgnc/43015
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13866
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4332
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19394
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr760Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

14-62212418-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62212418
    reference: chr 14
  end: Position
    type: ExactPosition
    position: 62212418
    reference: chr 14
allele count: 6
allele frequency: 4.944538756942956e-5
allele num: 121346
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000451696
  ensembl transcript: ENST00000557538
  gene symbol: HIF1A
  hgvsc: ENST00000557538.1:c.2035T>C
  hgvsp: ENST00000557538.1:c.2035T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000338018
  ensembl transcript: ENST00000337138
  gene symbol: HIF1A
  hgvsc: ENST00000337138.4:c.2212T>C
  hgvsp: ENST00000337138.4:c.2212T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258667
  ensembl transcript: ENST00000554254
  gene symbol: HIF1A-AS2
  hgvsc: ENST00000554254.1:n.213+5185A>G
  variant of: http://identifiers.org/hgnc/43015
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000378446
  ensembl transcript: ENST00000394997
  gene symbol: HIF1A
  hgvsc: ENST00000394997.1:c.2215T>C
  hgvsp: ENST00000394997.1:c.2215T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000437955
  ensembl transcript: ENST00000539097
  gene symbol: HIF1A
  hgvsc: ENST00000539097.1:c.2284T>C
  hgvsp: ENST00000539097.1:c.2284T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000100644
  ensembl protein: ENSP00000323326
  ensembl transcript: ENST00000323441
  gene symbol: HIF1A
  hgvsc: ENST00000323441.6:c.2202+887T>C
  variant of: http://identifiers.org/hgnc/4910
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000258964
  ensembl transcript: ENST00000555937
  gene symbol: RP11-618G20.1
  hgvsc: ENST00000555937.1:n.148+11415T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000100644
  ensembl transcript: ENST00000556827
  gene symbol: HIF1A
  hgvsc: ENST00000556827.1:n.96T>C
  variant of: http://identifiers.org/hgnc/4910
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Leu762Leu
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 18359
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4678
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18402
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3682
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41756
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6174
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.340556697179151e-5
allele num: 10706
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 658
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8058
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.19051e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.545e0

QD
type: SiteQuality
SIO_000300: 4.21e0

MQ
type: SiteQuality
SIO_000300: 5.245e1

GenotypeQuality
all individuals: 4310
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2115
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26896
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5140
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11196
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.519295047098146e-4
allele num: 6582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8764
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 1.7558e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

QD
type: SiteQuality
SIO_000300: 2.533e1

DP
type: SiteQuality
SIO_000300: 1.019336e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.86e0

VQSLOD
type: SiteQuality
SIO_000300: -3.002e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.132e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1445
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 8.457374830852504e-5
allele num: 11824
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7056
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5706
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

QD
type: SiteQuality
SIO_000300: 3.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQRankSum
type: SiteQuality
SIO_000300: -2.016e0

MQ
type: SiteQuality
SIO_000300: 5.309e1

DP
type: SiteQuality
SIO_000300: 1.086842e6

GenotypeQuality
all individuals: 328
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13771
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 352
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9654
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5970
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.665001665001665e-4
allele num: 6006
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7280
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 49650
num of homozygotes: 0

VQSLOD
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -9.5e-2

DP
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MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -2.7e-3

MQRankSum
type: SiteQuality
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FS
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ReadPosRankSum
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QD
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SIO_000300: 1.114e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6894
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54452
num of homozygotes: 0

South Asian
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allele frequency: 7.562008469449486e-5
allele num: 13224
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6230
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8026
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: 3.52e0

ReadPosRankSum
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FS
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQ
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.76e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 6.413545407901488e-5
allele num: 15592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63396
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9670
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8386
num of homozygotes: 0

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.796e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.33e-1

FS
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QD
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VQSLOD
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.376e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64490
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.525264394829612e-4
allele num: 8510
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African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.878e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.235e0

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.02e-1

DP
type: SiteQuality
SIO_000300: 1.386197e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

FS
type: SiteQuality
SIO_000300: 1.923e0

QD
type: SiteQuality
SIO_000300: 1.139e1

VQSLOD
type: SiteQuality
SIO_000300: -5.741000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.58687542046358e-5
allele num: 65404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.402075e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 4.074e0

MQ
type: SiteQuality
SIO_000300: 5.862e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.204e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10268
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520218911523259e-5
allele num: 65780
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.409431e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.815e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.47e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.771e0

FS
type: SiteQuality
SIO_000300: 3.71e0

QD
type: SiteQuality
SIO_000300: 1.269e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.506160195198361e-5
allele num: 66394
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.623e1

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.34e-1

VQSLOD
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FS
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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DP
type: SiteQuality
SIO_000300: 1.419872e6

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.72e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66402
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6606
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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ClippingRankSum
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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Latino
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African
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East Asian
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InbreedingCoeff
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VQSLOD
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QD
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ReadPosRankSum
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MQ
type: SiteQuality
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

African
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Other
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East Asian
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South Asian
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Latino
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allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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VQSLOD
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MQ
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MQRankSum
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BaseQRankSum
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DP
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QD
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66522
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South Asian
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Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6606
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Latino
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allele num: 11562
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East Asian
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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DP
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MQRankSum
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FS
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QD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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Other
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FS
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QD
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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MQ
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 8.647526807333103e-5
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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South Asian
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European (Finnish)
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VQSLOD
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ClippingRankSum
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MQRankSum
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FS
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MQ
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QD
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DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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Other
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African
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European (Finnish)
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BaseQRankSum
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ClippingRankSum
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FS
type: SiteQuality
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VQSLOD
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MQ
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6608
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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allele num: 66558
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African
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Latino
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VQSLOD
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MQ
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DP
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ReadPosRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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African
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South Asian
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European (Finnish)
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Other
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InbreedingCoeff
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VQSLOD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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FS
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Latino
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African
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European (Non-Finnish)
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Other
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BaseQRankSum
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MQRankSum
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DP
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VQSLOD
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MQ
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InbreedingCoeff
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QD
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ClippingRankSum
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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European (Finnish)
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South Asian
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European (Non-Finnish)
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ClippingRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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MQRankSum
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DP
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QD
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InbreedingCoeff
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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European (Non-Finnish)
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East Asian
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European (Finnish)
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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QD
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FS
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VQSLOD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.022463789936463e-5
allele num: 66418
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e-1

QD
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InbreedingCoeff
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SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 8.198e0

MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.414797e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66418
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

DP
type: SiteQuality
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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QD
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.12369871402327e-5
allele num: 16330
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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DP
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MQ
type: SiteQuality
SIO_000300: 5.86e1

QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 3.99e-1

ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.513912859175826e-5
allele num: 66054
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.924573243350536e-5
allele num: 10076
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63992
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.46e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.66e-1

QD
type: SiteQuality
SIO_000300: 1.402e1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.822e1

DP
type: SiteQuality
SIO_000300: 1.299962e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 11204
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63530
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South Asian
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allele frequency: 1.988335100742312e-4
allele num: 15088
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9998
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East Asian
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allele frequency: 0.0e0
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BaseQRankSum
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QD
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DP
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MQ
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.399384270920795e-4
allele num: 7146
num of homozygotes: 0

European (Finnish)
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African
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Latino
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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FS
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BaseQRankSum
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DP
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QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Other
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European (Non-Finnish)
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Latino
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allele frequency: 6.665185514330149e-4
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African
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European (Finnish)
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allele frequency: 0.0e0
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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FS
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MQ
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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African
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East Asian
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European (Finnish)
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Other
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South Asian
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allele num: 8174
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DP
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MQ
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QD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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European (Non-Finnish)
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allele num: 44942
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African
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South Asian
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Other
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East Asian
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Latino
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InbreedingCoeff
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VQSLOD
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MQ
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ReadPosRankSum
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DP
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MQRankSum
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FS
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 611
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 647
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2617
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.225090116149704e-5
allele num: 44942
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7928
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.763e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.8e-1

FS
type: SiteQuality
SIO_000300: 2.567e0

MQRankSum
type: SiteQuality
SIO_000300: 4.12e-1

QD
type: SiteQuality
SIO_000300: 1.153e1

DP
type: SiteQuality
SIO_000300: 1.40622e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.75e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

GenotypeQuality
all individuals: 1864
bin: 1.25e1
variant carriers: 33

GenotypeQuality
all individuals: 1552
bin: 4.25e1
variant carriers: 28

GenotypeQuality
all individuals: 1372
bin: 7.25e1
variant carriers: 24

GenotypeQuality
all individuals: 3513
bin: 1.75e1
variant carriers: 24

GenotypeQuality
all individuals: 16671
bin: 9.75e1
variant carriers: 455

GenotypeQuality
all individuals: 1089
bin: 4.75e1
variant carriers: 28

GenotypeQuality
all individuals: 3566
bin: 3.25e1
variant carriers: 20

GenotypeQuality
all individuals: 1075
bin: 9.25e1
variant carriers: 21

GenotypeQuality
all individuals: 1071
bin: 5.75e1
variant carriers: 66

European (Finnish)
type: Population
allele count: 15
allele frequency: 3.539405379896177e-3
allele num: 4238
num of homozygotes: 0

African
type: Population
allele count: 186
allele frequency: 3.229166666666667e-2
allele num: 5760
num of homozygotes: 0

Latino
type: Population
allele count: 41
allele frequency: 8.422350041084634e-3
allele num: 4868
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 454
allele frequency: 1.40470297029703e-2
allele num: 32320
num of homozygotes: 2

Other
type: Population
allele count: 5
allele frequency: 1.037344398340249e-2
allele num: 482
num of homozygotes: 0

South Asian
type: Population
allele count: 41
allele frequency: 6.987048398091343e-3
allele num: 5868
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 7.598784194528875e-4
allele num: 3948
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.828e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.676e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

DP
type: SiteQuality
SIO_000300: 8.19865e5

QD
type: SiteQuality
SIO_000300: 1.75e1

GenotypeQuality
all individuals: 8304
bin: 2.5e0
variant carriers: 209

GenotypeQuality
all individuals: 1050
bin: 8.25e1
variant carriers: 159

GenotypeQuality
all individuals: 3513
bin: 1.75e1
variant carriers: 298

GenotypeQuality
all individuals: 1243
bin: 7.75e1
variant carriers: 147

GenotypeQuality
all individuals: 16671
bin: 9.75e1
variant carriers: 2663

GenotypeQuality
all individuals: 1071
bin: 5.75e1
variant carriers: 215

GenotypeQuality
all individuals: 4224
bin: 2.75e1
variant carriers: 274

GenotypeQuality
all individuals: 1372
bin: 7.25e1
variant carriers: 233

GenotypeQuality
all individuals: 1089
bin: 4.75e1
variant carriers: 79

Latino
type: Population
allele count: 331
allele frequency: 6.799506984387839e-2
allele num: 4868
num of homozygotes: 10

South Asian
type: Population
allele count: 246
allele frequency: 4.192229038854806e-2
allele num: 5868
num of homozygotes: 2

African
type: Population
allele count: 363
allele frequency: 6.302083333333333e-2
allele num: 5760
num of homozygotes: 3

East Asian
type: Population
allele count: 116
allele frequency: 2.938196555217832e-2
allele num: 3948
num of homozygotes: 0

Other
type: Population
allele count: 42
allele frequency: 8.713692946058091e-2
allele num: 482
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 2704
allele frequency: 8.366336633663367e-2
allele num: 32320
num of homozygotes: 57

European (Finnish)
type: Population
allele count: 427
allele frequency: 1.007550731477112e-1
allele num: 4238
num of homozygotes: 13

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.19865e5

MQ
type: SiteQuality
SIO_000300: 5.676e1

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

QD
type: SiteQuality
SIO_000300: 1.75e1

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.828e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1552
bin: 4.25e1
variant carriers: 1346

GenotypeQuality
all individuals: 8304
bin: 2.5e0
variant carriers: 959

GenotypeQuality
all individuals: 1864
bin: 1.25e1
variant carriers: 1230

GenotypeQuality
all individuals: 1050
bin: 8.25e1
variant carriers: 934

GenotypeQuality
all individuals: 2319
bin: 3.75e1
variant carriers: 1981

GenotypeQuality
all individuals: 1243
bin: 7.75e1
variant carriers: 1113

GenotypeQuality
all individuals: 1372
bin: 7.25e1
variant carriers: 1228

GenotypeQuality
all individuals: 1071
bin: 5.75e1
variant carriers: 945

GenotypeQuality
all individuals: 16671
bin: 9.75e1
variant carriers: 14654

East Asian
type: Population
allele count: 2016
allele frequency: 5.106382978723404e-1
allele num: 3948
num of homozygotes: 343

African
type: Population
allele count: 2342
allele frequency: 4.065972222222222e-1
allele num: 5760
num of homozygotes: 271

European (Non-Finnish)
type: Population
allele count: 17785
allele frequency: 5.502784653465347e-1
allele num: 32320
num of homozygotes: 3122

South Asian
type: Population
allele count: 2803
allele frequency: 4.776755282890252e-1
allele num: 5868
num of homozygotes: 507

Latino
type: Population
allele count: 2863
allele frequency: 5.88126540673788e-1
allele num: 4868
num of homozygotes: 640

Other
type: Population
allele count: 256
allele frequency: 5.311203319502075e-1
allele num: 482
num of homozygotes: 47

European (Finnish)
type: Population
allele count: 2663
allele frequency: 6.283624351109014e-1
allele num: 4238
num of homozygotes: 630

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.828e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

DP
type: SiteQuality
SIO_000300: 8.19865e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.75e1

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

MQ
type: SiteQuality
SIO_000300: 5.676e1

European (Non-Finnish)
type: Population
allele count: 7075
allele frequency: 2.18904702970297e-1
allele num: 32320
num of homozygotes: 44

Other
type: Population
allele count: 115
allele frequency: 2.385892116182573e-1
allele num: 482
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 841
allele frequency: 1.984426616328457e-1
allele num: 4238
num of homozygotes: 1

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

DP
type: SiteQuality
SIO_000300: 8.19865e5

QD
type: SiteQuality
SIO_000300: 1.75e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.828e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

MQ
type: SiteQuality
SIO_000300: 5.676e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

European (Non-Finnish)
type: Population
allele count: 367
allele frequency: 1.135519801980198e-2
allele num: 32320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 37
allele frequency: 8.730533270410571e-3
allele num: 4238
num of homozygotes: 0

Latino
type: Population
allele count: 87
allele frequency: 1.787181594083813e-2
allele num: 4868
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

DP
type: SiteQuality
SIO_000300: 8.19865e5

MQ
type: SiteQuality
SIO_000300: 5.676e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.828e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

QD
type: SiteQuality
SIO_000300: 1.75e1

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

Latino
type: Population
allele count: 20
allele frequency: 4.108463434675432e-3
allele num: 4868
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.704158145875937e-4
allele num: 5868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.828e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.96e-1

QD
type: SiteQuality
SIO_000300: 1.75e1

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.19865e5

MQ
type: SiteQuality
SIO_000300: 5.676e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

GenotypeQuality
all individuals: 24
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 61
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 74
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 5.882352941176471e-2
allele num: 34
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.111111111111111e-2
allele num: 360
num of homozygotes: 2

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.73287e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.432e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.79e-1

QD
type: SiteQuality
SIO_000300: 1.326e1

MQ
type: SiteQuality
SIO_000300: 5.736e1

VQSLOD
type: SiteQuality
SIO_000300: 6.06e0

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28514
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 2.152852529601722e-3
allele num: 1858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.882352941176471e-3
allele num: 170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.5005e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.783e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.721e1

MQ
type: SiteQuality
SIO_000300: 5.329e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.78e-1

FS
type: SiteQuality
SIO_000300: 7.962e0

QD
type: SiteQuality
SIO_000300: 1.003e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.67e-1

GenotypeQuality
all individuals: 450
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20641
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6747
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6347
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1264
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4262
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4192
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.729257641921397e-4
allele num: 3664
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.697216564833673e-4
allele num: 5892
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.68322e5

FS
type: SiteQuality
SIO_000300: 3.395e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.43e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.331e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

QD
type: SiteQuality
SIO_000300: 1.157e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.16e-1

GenotypeQuality
all individuals: 22075
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2607
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5527
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3818
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28030
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4736
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5934
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.80052e5

ClippingRankSum
type: SiteQuality
SIO_000300: 5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.46e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.543e1

QD
type: SiteQuality
SIO_000300: 1.448e1

GenotypeQuality
all individuals: 1085
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2869
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1915
bin: 9.75e1
variant carriers: 76

GenotypeQuality
all individuals: 3756
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5558
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 206
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 523
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 5.270925574530887e-4
allele num: 28458
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 4.241781548250266e-3
allele num: 3772
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 1.155802126675913e-3
allele num: 4326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4334
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 2.709462275948312e-3
allele num: 4798
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.192982456140351e-3
allele num: 456
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 6.613756613756613e-4
allele num: 6048
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.88015e5

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.054e0

FS
type: SiteQuality
SIO_000300: 6.863e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.34e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

MQ
type: SiteQuality
SIO_000300: 5.104e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.33e-1

QD
type: SiteQuality
SIO_000300: 1.025e1

GenotypeQuality
all individuals: 24727
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6550
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1865
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 942
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4378
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.646903123345686e-4
allele num: 3778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.738404839719074e-4
allele num: 28762
num of homozygotes: 1

African
type: Population
allele count: 10
allele frequency: 2.059308072487644e-3
allele num: 4856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQ
type: SiteQuality
SIO_000300: 5.521e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.437e1

MQRankSum
type: SiteQuality
SIO_000300: -6.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.65e0

FS
type: SiteQuality
SIO_000300: 3.075e0

DP
type: SiteQuality
SIO_000300: 7.08319e5

GenotypeQuality
all individuals: 6550
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24727
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4037
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 6.177924217462932e-4
allele num: 4856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28762
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 4.582951420714941e-4
allele num: 4364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.075e0

MQ
type: SiteQuality
SIO_000300: 5.521e1

MQRankSum
type: SiteQuality
SIO_000300: -6.27e-1

QD
type: SiteQuality
SIO_000300: 1.437e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.65e0

DP
type: SiteQuality
SIO_000300: 7.08319e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

GenotypeQuality
all individuals: 403
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26181
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 698
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4544
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.327316166710911e-4
allele num: 7534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4930
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.14e-1

QD
type: SiteQuality
SIO_000300: 8.390000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.792e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.491e0

FS
type: SiteQuality
SIO_000300: 2.077e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

DP
type: SiteQuality
SIO_000300: 8.67247e5

GenotypeQuality
all individuals: 1906
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 680
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1866
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4220
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4972
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 1.084598698481562e-3
allele num: 4610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34958
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.674e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

QD
type: SiteQuality
SIO_000300: 1.069e1

DP
type: SiteQuality
SIO_000300: 8.74939e5

GenotypeQuality
all individuals: 24302
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 2158
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 550
bin: 4.25e1
variant carriers: 8

GenotypeQuality
all individuals: 434
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1402
bin: 6.75e1
variant carriers: 11

GenotypeQuality
all individuals: 748
bin: 1.75e1
variant carriers: 12

GenotypeQuality
all individuals: 870
bin: 5.25e1
variant carriers: 17

GenotypeQuality
all individuals: 185
bin: 9.25e1
variant carriers: 30

GenotypeQuality
all individuals: 13058
bin: 6.25e1
variant carriers: 16

East Asian
type: Population
allele count: 1
allele frequency: 2.11864406779661e-4
allele num: 4720
num of homozygotes: 0

South Asian
type: Population
allele count: 65
allele frequency: 8.26972010178117e-3
allele num: 7860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 125
allele frequency: 2.443315089913995e-2
allele num: 5116
num of homozygotes: 1

Latino
type: Population
allele count: 130
allele frequency: 2.133245815556285e-2
allele num: 6094
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 1094
allele frequency: 2.972341466065315e-2
allele num: 36806
num of homozygotes: 7

African
type: Population
allele count: 521
allele frequency: 8.395101514663229e-2
allele num: 6206
num of homozygotes: 15

Other
type: Population
allele count: 19
allele frequency: 3.275862068965518e-2
allele num: 580
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.505e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.434e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.25e0

DP
type: SiteQuality
SIO_000300: 9.04656e5

GenotypeQuality
all individuals: 582
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1726
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17193
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1847
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.516356316054353e-5
allele num: 39740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5356
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.60893e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.06e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

QD
type: SiteQuality
SIO_000300: 5.13e0

GenotypeQuality
all individuals: 1113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24566
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 605
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 9.75e1
variant carriers: 241

GenotypeQuality
all individuals: 2332
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.936400017212445e-4
allele num: 46478
num of homozygotes: 0

Latino
type: Population
allele count: 27
allele frequency: 3.178714386625854e-3
allele num: 8494
num of homozygotes: 1

African
type: Population
allele count: 202
allele frequency: 2.655099894847529e-2
allele num: 7608
num of homozygotes: 1

MQ
type: SiteQuality
SIO_000300: 5.529e1

MQRankSum
type: SiteQuality
SIO_000300: -9.51e-1

QD
type: SiteQuality
SIO_000300: 1.82e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.3e0

DP
type: SiteQuality
SIO_000300: 1.094596e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

GenotypeQuality
all individuals: 252
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1069
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.350986219940557e-4
allele num: 7402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48036
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.843e1

FS
type: SiteQuality
SIO_000300: 7.499e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.13e-1

DP
type: SiteQuality
SIO_000300: 1.117768e6

VQSLOD
type: SiteQuality
SIO_000300: -1.821e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e0

QD
type: SiteQuality
SIO_000300: 1.629e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.03e-1

GenotypeQuality
all individuals: 714
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15182
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1923
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6082
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.856598743096553e-4
allele num: 10502
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.49e0

DP
type: SiteQuality
SIO_000300: 1.146451e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.667e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

FS
type: SiteQuality
SIO_000300: 4.373e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.12e-1

GenotypeQuality
all individuals: 1170
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 28811
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1098
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2014
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8060
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 2.181847032688036e-4
allele num: 50416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.319664492078285e-5
allele num: 10730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6136
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.167052e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

QD
type: SiteQuality
SIO_000300: 1.486e1

FS
type: SiteQuality
SIO_000300: 7.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e0

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2068
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11036
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.928342782212966e-5
allele num: 51858
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.51e0

DP
type: SiteQuality
SIO_000300: 1.195958e6

FS
type: SiteQuality
SIO_000300: 3.074e0

VQSLOD
type: SiteQuality
SIO_000300: 2.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-2

QD
type: SiteQuality
SIO_000300: 1.689e1

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2082
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.787373990133696e-5
allele num: 55948
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.355e1

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-2

FS
type: SiteQuality
SIO_000300: 5.011e0

MQRankSum
type: SiteQuality
SIO_000300: 4.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

DP
type: SiteQuality
SIO_000300: 1.275279e6

MQ
type: SiteQuality
SIO_000300: 5.923e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.725e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.69e-1

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2129
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
all individuals: 1476
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6769
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.192501644376233e-4
allele num: 9122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.822489520685256e-4
allele num: 10974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13002
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.424e0

FS
type: SiteQuality
SIO_000300: 1.1003e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.685e0

DP
type: SiteQuality
SIO_000300: 1.34305e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

MQ
type: SiteQuality
SIO_000300: 5.896e1

QD
type: SiteQuality
SIO_000300: 1.325e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

GenotypeQuality
all individuals: 2293
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1152
bin: 7.5e0
variant carriers: 44

GenotypeQuality
all individuals: 1754
bin: 4.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1623
bin: 2.75e1
variant carriers: 30

GenotypeQuality
all individuals: 1626
bin: 4.25e1
variant carriers: 10

GenotypeQuality
all individuals: 12145
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1126
bin: 1.25e1
variant carriers: 42

GenotypeQuality
all individuals: 1688
bin: 3.75e1
variant carriers: 15

GenotypeQuality
all individuals: 4838
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1363
bin: 5.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1755
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2702
bin: 7.25e1
variant carriers: 2

African
type: Population
allele count: 4
allele frequency: 4.317789291882556e-4
allele num: 9264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 62
allele frequency: 1.05867085581586e-3
allele num: 58564
num of homozygotes: 0

South Asian
type: Population
allele count: 83
allele frequency: 6.844796305459344e-3
allele num: 12126
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.731343283582089e-3
allele num: 804
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.989834562487542e-4
allele num: 10034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.553277415346381e-4
allele num: 6438
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.406970784213224e-4
allele num: 7804
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.994e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.21e-2

DP
type: SiteQuality
SIO_000300: 2.440489e6

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e-1

QD
type: SiteQuality
SIO_000300: 9.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

GenotypeQuality
all individuals: 4630
bin: 2.5e0
variant carriers: 58

GenotypeQuality
all individuals: 4838
bin: 6.75e1
variant carriers: 11

GenotypeQuality
all individuals: 1847
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1704
bin: 2.25e1
variant carriers: 64

GenotypeQuality
all individuals: 1626
bin: 3.25e1
variant carriers: 35

GenotypeQuality
all individuals: 1626
bin: 4.25e1
variant carriers: 23

GenotypeQuality
all individuals: 1623
bin: 2.75e1
variant carriers: 40

GenotypeQuality
all individuals: 2702
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 3579
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1132
bin: 1.75e1
variant carriers: 61

GenotypeQuality
all individuals: 3140
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1363
bin: 5.75e1
variant carriers: 14

South Asian
type: Population
allele count: 95
allele frequency: 7.834405409863104e-3
allele num: 12126
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.553277415346381e-4
allele num: 6438
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.972892166633447e-4
allele num: 10034
num of homozygotes: 0

African
type: Population
allele count: 26
allele frequency: 2.806563039723662e-3
allele num: 9264
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.731343283582089e-3
allele num: 804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 170
allele frequency: 2.90280718530155e-3
allele num: 58564
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 2.050230650948232e-3
allele num: 7804
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.994e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

DP
type: SiteQuality
SIO_000300: 2.440489e6

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

QD
type: SiteQuality
SIO_000300: 9.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.21e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

GenotypeQuality
all individuals: 4630
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1126
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2702
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variant carriers: 0

GenotypeQuality
all individuals: 12145
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8979
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variant carriers: 0

GenotypeQuality
all individuals: 3140
bin: 8.25e1
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GenotypeQuality
all individuals: 1623
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12126
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7804
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.966115208291808e-5
allele num: 10034
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58564
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

DP
type: SiteQuality
SIO_000300: 2.440489e6

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

QD
type: SiteQuality
SIO_000300: 9.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

MQ
type: SiteQuality
SIO_000300: 5.994e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.21e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e-1

GenotypeQuality
all individuals: 989
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
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variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 2.5e0
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GenotypeQuality
all individuals: 1011
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
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variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13301
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variant carriers: 1

GenotypeQuality
all individuals: 1064
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4452
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3830
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13005
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.573762236001385e-5
allele num: 63542
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.3e-2

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 1.576e1

MQRankSum
type: SiteQuality
SIO_000300: -3.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.36477e6

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

GenotypeQuality
all individuals: 2435
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
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GenotypeQuality
all individuals: 413
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variant carriers: 0

GenotypeQuality
all individuals: 3939
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variant carriers: 0

GenotypeQuality
all individuals: 412
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 294
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variant carriers: 0

GenotypeQuality
all individuals: 16950
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variant carriers: 0

GenotypeQuality
all individuals: 292
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variant carriers: 0

GenotypeQuality
all individuals: 14408
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.669e1

DP
type: SiteQuality
SIO_000300: 2.325035e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.042e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.152e0

MQRankSum
type: SiteQuality
SIO_000300: 9.98e-1

QD
type: SiteQuality
SIO_000300: 1.137e1

GenotypeQuality
all individuals: 18170
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2431
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3052
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7799
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14407
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.593360995850622e-4
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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FS
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QD
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DP
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BaseQRankSum
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VQSLOD
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MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele num: 16456
num of homozygotes: 0

BaseQRankSum
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DP
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VQSLOD
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele num: 8652
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.543e0

FS
type: SiteQuality
SIO_000300: 1.0995e1

DP
type: SiteQuality
SIO_000300: 2.336039e6

MQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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ReadPosRankSum
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SIO_000300: -1.18e-1

QD
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.02e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.004266057802079e-5
allele num: 66572
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10234
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 2.337904e6

VQSLOD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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MQRankSum
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SIO_000300: -2.63e-1

FS
type: SiteQuality
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QD
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ClippingRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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Other
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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InbreedingCoeff
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MQ
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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European (Non-Finnish)
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allele num: 66654
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African
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European (Finnish)
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East Asian
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South Asian
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Other
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MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
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QD
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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Other
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East Asian
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European (Non-Finnish)
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European (Finnish)
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FS
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MQ
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Finnish)
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Other
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East Asian
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African
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European (Non-Finnish)
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South Asian
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BaseQRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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DP
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MQ
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ReadPosRankSum
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MQRankSum
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VQSLOD
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QD
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ClippingRankSum
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