12-65720617-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720617
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720617
    reference: chr 12
allele count: 1
allele frequency: 8.585901948999742e-6
allele num: 116470
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18182G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.88G>A
  hgvsp: ENSP00000442620.1:p.Asp30Asn
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.88G>A
  hgvsp: ENSP00000441650.1:p.Asp30Asn
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.134G>A
  hgvsp: ENSP00000440722.1:p.Asp46Asn
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.88G>A
  hgvsp: ENSP00000312274.5:p.Asp30Asn
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.88G>A
  hgvsp: ENSP00000445843.1:p.Asp30Asn
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.109G>A
  hgvsp: ENSP00000437623.1:p.Asp37Asn
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.109G>A
  hgvsp: ENSP00000347324.3:p.Asp37Asn
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2613
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp37Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

12-65720619-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720619
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720619
    reference: chr 12
allele count: 2
allele frequency: 1.712768690588336e-5
allele num: 116770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.90T>C
  hgvsp: ENST00000308259.5:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.90T>C
  hgvsp: ENST00000535664.1:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.90T>C
  hgvsp: ENST00000535239.1:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.136T>C
  hgvsp: ENST00000541189.1:c.136T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.111T>C
  hgvsp: ENST00000355192.3:c.111T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18184T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.90T>C
  hgvsp: ENST00000538045.1:c.90T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.111T>C
  hgvsp: ENST00000540804.1:c.111T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3188
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp37Asp
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

12-65720620-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720620
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720620
    reference: chr 12
allele count: 2
allele frequency: 1.710249525405757e-5
allele num: 116942
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.112A>G
  hgvsp: ENSP00000437623.1:p.Lys38Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.91A>G
  hgvsp: ENSP00000442620.1:p.Lys31Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18185A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.91A>G
  hgvsp: ENSP00000441650.1:p.Lys31Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.91A>G
  hgvsp: ENSP00000312274.5:p.Lys31Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.137A>G
  hgvsp: ENSP00000440722.1:p.Lys47Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.91A>G
  hgvsp: ENSP00000445843.1:p.Lys31Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.112A>G
  hgvsp: ENSP00000347324.3:p.Lys38Glu
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys38Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

12-65720622-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720622
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720622
    reference: chr 12
allele count: 4
allele frequency: 3.411281106619591e-5
allele num: 117258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.93A>G
  hgvsp: ENST00000535664.1:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.93A>G
  hgvsp: ENST00000308259.5:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.139A>G
  hgvsp: ENST00000541189.1:c.139A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.93A>G
  hgvsp: ENST00000535239.1:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.114A>G
  hgvsp: ENST00000540804.1:c.114A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18187A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.114A>G
  hgvsp: ENST00000355192.3:c.114A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.93A>G
  hgvsp: ENST00000538045.1:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8561
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys38Lys
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

12-65720639-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720639
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720639
    reference: chr 12
allele count: 1
allele frequency: 8.436113313874031e-6
allele num: 118538
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18204T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.131T>C
  hgvsp: ENSP00000347324.3:p.Val44Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.110T>C
  hgvsp: ENSP00000442620.1:p.Val37Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.156T>C
  hgvsp: ENSP00000440722.1:p.Val53Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.131T>C
  hgvsp: ENSP00000437623.1:p.Val44Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.110T>C
  hgvsp: ENSP00000312274.5:p.Val37Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.110T>C
  hgvsp: ENSP00000445843.1:p.Val37Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.110T>C
  hgvsp: ENSP00000441650.1:p.Val37Ala
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2097
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val44Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

12-65720643-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720643
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720643
    reference: chr 12
allele count: 30
allele frequency: 2.527167045741723e-4
allele num: 118710
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.114T>C
  hgvsp: ENST00000538045.1:c.114T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18208T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.114T>C
  hgvsp: ENST00000535664.1:c.114T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.114T>C
  hgvsp: ENST00000535239.1:c.114T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.135T>C
  hgvsp: ENST00000540804.1:c.135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.114T>C
  hgvsp: ENST00000308259.5:c.114T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.135T>C
  hgvsp: ENST00000355192.3:c.135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.160T>C
  hgvsp: ENST00000541189.1:c.160T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40557
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3361
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4791
  bin: 9.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe45Phe
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

12-65720664-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720664
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720664
    reference: chr 12
allele count: 1
allele frequency: 8.463387386167439e-6
allele num: 118156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.135G>A
  hgvsp: ENST00000535664.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.156G>A
  hgvsp: ENST00000540804.1:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.135G>A
  hgvsp: ENST00000538045.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.10G>A
  hgvsp: ENST00000446731.2:c.10G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.181G>A
  hgvsp: ENST00000541189.1:c.181G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.156G>A
  hgvsp: ENST00000355192.3:c.156G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.135G>A
  hgvsp: ENST00000535239.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.135G>A
  hgvsp: ENST00000308259.5:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18229G>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys52Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

12-65720665-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720665
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720665
    reference: chr 12
allele count: 5
allele frequency: 4.235852253473399e-5
allele num: 118040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.157C>T
  hgvsp: ENSP00000437623.1:p.Arg53Trp
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.136C>T
  hgvsp: ENSP00000442620.1:p.Arg46Trp
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.157C>T
  hgvsp: ENSP00000347324.3:p.Arg53Trp
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.136C>T
  hgvsp: ENSP00000312274.5:p.Arg46Trp
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.11C>T
  hgvsp: ENSP00000404903.2:p.Arg5Trp
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.136C>T
  hgvsp: ENSP00000441650.1:p.Arg46Trp
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.136C>T
  hgvsp: ENSP00000445843.1:p.Arg46Trp
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18230C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.182C>T
  hgvsp: ENSP00000440722.1:p.Arg62Trp
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39270
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg53Trp
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

12-65720666-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720666
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720666
    reference: chr 12
allele count: 1
allele frequency: 8.471560969824299e-6
allele num: 118042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.137G>A
  hgvsp: ENSP00000442620.1:p.Arg46Gln
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.12G>A
  hgvsp: ENSP00000404903.2:p.Arg5Gln
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.183G>A
  hgvsp: ENSP00000440722.1:p.Arg62Gln
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.137G>A
  hgvsp: ENSP00000312274.5:p.Arg46Gln
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18231G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.137G>A
  hgvsp: ENSP00000441650.1:p.Arg46Gln
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.158G>A
  hgvsp: ENSP00000437623.1:p.Arg53Gln
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.137G>A
  hgvsp: ENSP00000445843.1:p.Arg46Gln
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.158G>A
  hgvsp: ENSP00000347324.3:p.Arg53Gln
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39239
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg53Gln
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/12-65720671-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720671
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720671
    reference: chr 12
allele count: 1
allele frequency: 8.50152177239726e-6
allele num: 117626
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.163A>C
  hgvsp: ENSP00000347324.3:p.Thr55Pro
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.142A>C
  hgvsp: ENSP00000441650.1:p.Thr48Pro
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.142A>C
  hgvsp: ENSP00000312274.5:p.Thr48Pro
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.163A>C
  hgvsp: ENSP00000437623.1:p.Thr55Pro
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18236A>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.17A>C
  hgvsp: ENSP00000404903.2:p.Thr7Pro
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.142A>C
  hgvsp: ENSP00000442620.1:p.Thr48Pro
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.188A>C
  hgvsp: ENSP00000440722.1:p.Thr64Pro
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.142A>C
  hgvsp: ENSP00000445843.1:p.Thr48Pro
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9723
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3302
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2855
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr55Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

12-65720673-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720673
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720673
    reference: chr 12
allele count: 1
allele frequency: 8.50933474021001e-6
allele num: 117518
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18238A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.165A>G
  hgvsp: ENST00000540804.1:c.165A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.144A>G
  hgvsp: ENST00000535664.1:c.144A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.144A>G
  hgvsp: ENST00000538045.1:c.144A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.165A>G
  hgvsp: ENST00000355192.3:c.165A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.144A>G
  hgvsp: ENST00000308259.5:c.144A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.190A>G
  hgvsp: ENST00000541189.1:c.190A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.19A>G
  hgvsp: ENST00000446731.2:c.19A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.144A>G
  hgvsp: ENST00000535239.1:c.144A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9767
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2946
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr55Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

12-65720674-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720674
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720674
    reference: chr 12
allele count: 1
allele frequency: 8.517452259680084e-6
allele num: 117406
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.166C>G
  hgvsp: ENSP00000347324.3:p.Pro56Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.166C>G
  hgvsp: ENSP00000437623.1:p.Pro56Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18239C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.145C>G
  hgvsp: ENSP00000445843.1:p.Pro49Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.145C>G
  hgvsp: ENSP00000441650.1:p.Pro49Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.145C>G
  hgvsp: ENSP00000442620.1:p.Pro49Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.191C>G
  hgvsp: ENSP00000440722.1:p.Pro65Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.145C>G
  hgvsp: ENSP00000312274.5:p.Pro49Ala
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.20C>G
  hgvsp: ENSP00000404903.2:p.Pro8Ala
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38455
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3289
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro56Ala
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS

http://identifiers.org/exac.variant/12-65720675-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720675
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720675
    reference: chr 12
allele count: 1
allele frequency: 8.545839885143913e-6
allele num: 117016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.146C>A
  hgvsp: ENSP00000441650.1:p.Pro49His
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.146C>A
  hgvsp: ENSP00000445843.1:p.Pro49His
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.192C>A
  hgvsp: ENSP00000440722.1:p.Pro65His
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.146C>A
  hgvsp: ENSP00000442620.1:p.Pro49His
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18240C>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.167C>A
  hgvsp: ENSP00000347324.3:p.Pro56His
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.146C>A
  hgvsp: ENSP00000312274.5:p.Pro49His
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.21C>A
  hgvsp: ENSP00000404903.2:p.Pro8His
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.167C>A
  hgvsp: ENSP00000437623.1:p.Pro56His
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro56His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ

12-65720675-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720675
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720675
    reference: chr 12
allele count: 2
allele frequency: 1.709167977028783e-5
allele num: 117016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18240C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.146C>T
  hgvsp: ENSP00000312274.5:p.Pro49Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.167C>T
  hgvsp: ENSP00000437623.1:p.Pro56Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.146C>T
  hgvsp: ENSP00000445843.1:p.Pro49Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.146C>T
  hgvsp: ENSP00000442620.1:p.Pro49Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.146C>T
  hgvsp: ENSP00000441650.1:p.Pro49Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.192C>T
  hgvsp: ENSP00000440722.1:p.Pro65Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.21C>T
  hgvsp: ENSP00000404903.2:p.Pro8Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.167C>T
  hgvsp: ENSP00000347324.3:p.Pro56Leu
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 755
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro56Leu
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/12-65720709-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720709
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720709
    reference: chr 12
allele count: 2
allele frequency: 1.918023668412068e-5
allele num: 104274
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.55C>A
  hgvsp: ENST00000446731.2:c.55C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.201C>A
  hgvsp: ENST00000540804.1:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.180C>A
  hgvsp: ENST00000535664.1:c.180C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.226C>A
  hgvsp: ENST00000541189.1:c.226C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.180C>A
  hgvsp: ENST00000308259.5:c.180C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.201C>A
  hgvsp: ENST00000355192.3:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.180C>A
  hgvsp: ENST00000535239.1:c.180C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.180C>A
  hgvsp: ENST00000538045.1:c.180C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18274C>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24468
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4850
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr67Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

12-65720709-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720709
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720709
    reference: chr 12
allele count: 119
allele frequency: 1.141224082705181e-3
allele num: 104274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.226C>T
  hgvsp: ENST00000541189.1:c.226C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.201C>T
  hgvsp: ENST00000355192.3:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.180C>T
  hgvsp: ENST00000538045.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.55C>T
  hgvsp: ENST00000446731.2:c.55C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.180C>T
  hgvsp: ENST00000308259.5:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.180C>T
  hgvsp: ENST00000535239.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.180C>T
  hgvsp: ENST00000535664.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18274C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.201C>T
  hgvsp: ENST00000540804.1:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8239
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 24468
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 1.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 8201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr67Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

12-65720710-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720710
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720710
    reference: chr 12
allele count: 2
allele frequency: 1.955110659263314e-5
allele num: 102296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.227G>A
  hgvsp: ENSP00000440722.1:p.Glu77Lys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.202G>A
  hgvsp: ENSP00000347324.3:p.Glu68Lys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18275G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.181G>A
  hgvsp: ENSP00000445843.1:p.Glu61Lys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.202G>A
  hgvsp: ENSP00000437623.1:p.Glu68Lys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.181G>A
  hgvsp: ENSP00000312274.5:p.Glu61Lys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.181G>A
  hgvsp: ENSP00000441650.1:p.Glu61Lys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.56G>A
  hgvsp: ENSP00000404903.2:p.Glu20Lys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.181G>A
  hgvsp: ENSP00000442620.1:p.Glu61Lys
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22622
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1943
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9065
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu68Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

12-65720720-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720720
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720720
    reference: chr 12
allele count: 2
allele frequency: 2.135976247944123e-5
allele num: 93634
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+6G>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+6G>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+6G>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+6G>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+6G>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+6G>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+6G>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+6G>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18285G>T
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2920
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 5.25e1
  variant carriers: 0
hgvs: c.206+6G>T
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

12-65720723-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720723
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720723
    reference: chr 12
allele count: 1
allele frequency: 1.102049812651532e-5
allele num: 90740
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18288A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+9A>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4460
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11825
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1098
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3327
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

12-65720724-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720724
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720724
    reference: chr 12
allele count: 1
allele frequency: 1.104899122710097e-5
allele num: 90506
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+10G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18289G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+10G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+10G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+10G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+10G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+10G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+10G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+10G>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11824
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4744
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

12-65720725-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720725
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720724
    reference: chr 12
allele count: 1
allele frequency: 1.115498739486424e-5
allele num: 89646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18293delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+14delT
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3394
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27522
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: CT
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

12-65720727-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720727
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720727
    reference: chr 12
allele count: 1
allele frequency: 1.128057034563668e-5
allele num: 88648
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+13T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18292T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+13T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+13T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+13T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+13T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+13T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+13T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+13T>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28344
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12943
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum

12-65720731-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720731
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720731
    reference: chr 12
allele count: 3
allele frequency: 3.522946122410634e-5
allele num: 85156
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+17T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+17T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+17T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+17T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18296T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+17T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+17T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+17T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+17T>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7168
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

12-65720731-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720731
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720732
    reference: chr 12
allele count: 1
allele frequency: 1.174315374136878e-5
allele num: 85156
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+22dupA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+22dupA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+22dupA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+22dupA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+22dupA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18301dupA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+22dupA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+22dupA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+22dupA
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7168
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3199
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2303
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

12-65720741-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720741
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720741
    reference: chr 12
allele count: 1
allele frequency: 1.285677552069941e-5
allele num: 77780
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+27T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+27T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18306T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+27T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+27T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+27T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+27T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+27T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+27T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22578
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1454
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4460
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5147
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4741
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

12-65720749-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720749
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720749
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 70808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+35T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+35T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+35T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+35T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+35T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+35T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18314T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+35T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+35T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19338
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3248
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4559
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP

12-65720756-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720756
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720756
    reference: chr 12
allele count: 1
allele frequency: 1.548083472660846e-5
allele num: 64596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+42C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+42C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+42C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+42C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+42C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+42C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+42C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18321C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+42C>T
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21990
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5603
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1778
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17564
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1829
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5296
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4454
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

12-65720763-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65720763
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65720763
    reference: chr 12
allele count: 1
allele frequency: 1.629089013423693e-5
allele num: 61384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.185+49C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.185+49C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.185+49C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.206+49C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.231+49C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.60+49C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.185+49C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.206+49C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+18328C>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23201
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5027
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4381
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7048
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2810
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

12-65722269-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722269
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722269
    reference: chr 12
allele count: 1
allele frequency: 8.401949252226517e-6
allele num: 119020
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.232-37T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19834T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.186-37T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.61-37T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.186-37T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.186-37T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.186-37T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.207-37T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.207-37T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2540
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20855
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/12-65722270-AAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722270
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722268
    reference: chr 12
allele count: 1
allele frequency: 8.398844319021702e-6
allele num: 119064
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.186-35_186-34delAC
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.207-35_207-34delAC
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.61-35_61-34delAC
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19836_*89+19837delAC
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.207-35_207-34delAC
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.186-35_186-34delAC
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.232-35_232-34delAC
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.186-35_186-34delAC
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.186-35_186-34delAC
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3408
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: AAC
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

12-65722280-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722280
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722280
    reference: chr 12
allele count: 1
allele frequency: 8.341953351796856e-6
allele num: 119876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.186-26T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19845T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.207-26T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.186-26T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.207-26T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.186-26T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.232-26T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.61-26T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.186-26T>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

12-65722291-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722291
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722291
    reference: chr 12
allele count: 2
allele frequency: 1.656726308813784e-5
allele num: 120720
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.232-15C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.186-15C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.186-15C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.61-15C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.186-15C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.207-15C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.207-15C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19856C>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.186-15C>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2420
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12679
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

12-65722291-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722291
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722290
    reference: chr 12
allele count: 1
allele frequency: 8.28363154406892e-6
allele num: 120720
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.232-14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.61-14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19857delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.186-14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.207-14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.186-14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.186-14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.186-14delT
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.207-14delT
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2449
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: CT
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

12-65722292-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722292
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722292
    reference: chr 12
allele count: 1
allele frequency: 8.279653579294243e-6
allele num: 120778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.186-14T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.207-14T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19857T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.207-14T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.232-14T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.186-14T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.186-14T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.61-14T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.186-14T>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2450
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS

12-65722293-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722293
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722293
    reference: chr 12
allele count: 1
allele frequency: 8.276912380605539e-6
allele num: 120818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.207-13G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.186-13G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19858G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.232-13G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.186-13G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.186-13G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.61-13G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.207-13G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.186-13G>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3458
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

12-65722297-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722297
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722297
    reference: chr 12
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.207-9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.186-9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.186-9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.186-9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.207-9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.61-9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19862A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.186-9A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.232-9A>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13711
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6536
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

12-65722309-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722309
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722309
    reference: chr 12
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.189C>T
  hgvsp: ENST00000535239.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.210C>T
  hgvsp: ENST00000355192.3:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19874C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.235C>T
  hgvsp: ENST00000541189.1:c.235C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.189C>T
  hgvsp: ENST00000308259.5:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.189C>T
  hgvsp: ENST00000538045.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.64C>T
  hgvsp: ENST00000446731.2:c.64C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.210C>T
  hgvsp: ENST00000540804.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.189C>T
  hgvsp: ENST00000535664.1:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12680
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala70Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-65722311-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722311
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722311
    reference: chr 12
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.237T>G
  hgvsp: ENSP00000440722.1:p.Phe80Cys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.212T>G
  hgvsp: ENSP00000347324.3:p.Phe71Cys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.191T>G
  hgvsp: ENSP00000441650.1:p.Phe64Cys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.191T>G
  hgvsp: ENSP00000442620.1:p.Phe64Cys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.191T>G
  hgvsp: ENSP00000445843.1:p.Phe64Cys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.191T>G
  hgvsp: ENSP00000312274.5:p.Phe64Cys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.66T>G
  hgvsp: ENSP00000404903.2:p.Phe23Cys
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19876T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.212T>G
  hgvsp: ENSP00000437623.1:p.Phe71Cys
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Phe71Cys
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/12-65722318-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722318
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722318
    reference: chr 12
allele count: 4
allele frequency: 3.299458888742246e-5
allele num: 121232
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.73A>C
  hgvsp: ENST00000446731.2:c.73A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.198A>C
  hgvsp: ENST00000308259.5:c.198A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.198A>C
  hgvsp: ENST00000535664.1:c.198A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.219A>C
  hgvsp: ENST00000540804.1:c.219A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.244A>C
  hgvsp: ENST00000541189.1:c.244A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19883A>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.198A>C
  hgvsp: ENST00000538045.1:c.198A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.219A>C
  hgvsp: ENST00000355192.3:c.219A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.198A>C
  hgvsp: ENST00000535239.1:c.198A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2461
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly73Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

12-65722336-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722336
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722336
    reference: chr 12
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.216A>G
  hgvsp: ENST00000308259.5:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.216A>G
  hgvsp: ENST00000535664.1:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.237A>G
  hgvsp: ENST00000355192.3:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.216A>G
  hgvsp: ENST00000535239.1:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19901A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.237A>G
  hgvsp: ENST00000540804.1:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.262A>G
  hgvsp: ENST00000541189.1:c.262A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.91A>G
  hgvsp: ENST00000446731.2:c.91A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.216A>G
  hgvsp: ENST00000538045.1:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30117
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys79Lys
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

12-65722342-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722342
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722342
    reference: chr 12
allele count: 7
allele frequency: 5.772243753607652e-5
allele num: 121270
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19907T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.268T>C
  hgvsp: ENST00000541189.1:c.268T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.222T>C
  hgvsp: ENST00000538045.1:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.222T>C
  hgvsp: ENST00000535239.1:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.97T>C
  hgvsp: ENST00000446731.2:c.97T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.243T>C
  hgvsp: ENST00000355192.3:c.243T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.243T>C
  hgvsp: ENST00000540804.1:c.243T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.222T>C
  hgvsp: ENST00000535664.1:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.222T>C
  hgvsp: ENST00000308259.5:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30120
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro81Pro
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

12-65722354-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722354
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722354
    reference: chr 12
allele count: 18
allele frequency: 1.484536082474227e-4
allele num: 121250
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.255A>G
  hgvsp: ENST00000540804.1:c.255A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.255A>G
  hgvsp: ENST00000355192.3:c.255A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.234A>G
  hgvsp: ENST00000538045.1:c.234A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.234A>G
  hgvsp: ENST00000535664.1:c.234A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.109A>G
  hgvsp: ENST00000446731.2:c.109A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.280A>G
  hgvsp: ENST00000541189.1:c.280A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19919A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.234A>G
  hgvsp: ENST00000535239.1:c.234A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.234A>G
  hgvsp: ENST00000308259.5:c.234A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7321
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys85Lys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

12-65722356-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722356
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722356
    reference: chr 12
allele count: 4
allele frequency: 3.299241174529858e-5
allele num: 121240
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.257G>A
  hgvsp: ENSP00000347324.3:p.Cys86Tyr
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.111G>A
  hgvsp: ENSP00000404903.2:p.Cys38Tyr
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.236G>A
  hgvsp: ENSP00000312274.5:p.Cys79Tyr
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.282G>A
  hgvsp: ENSP00000440722.1:p.Cys95Tyr
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.236G>A
  hgvsp: ENSP00000441650.1:p.Cys79Tyr
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19921G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.257G>A
  hgvsp: ENSP00000437623.1:p.Cys86Tyr
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.236G>A
  hgvsp: ENSP00000442620.1:p.Cys79Tyr
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.236G>A
  hgvsp: ENSP00000445843.1:p.Cys79Tyr
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Cys86Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

12-65722364-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722364
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722364
    reference: chr 12
allele count: 3
allele frequency: 2.474839135456195e-5
allele num: 121220
alternate allele: G
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.244T>G
  hgvsp: ENSP00000442620.1:p.Cys82Gly
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.244T>G
  hgvsp: ENSP00000312274.5:p.Cys82Gly
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.290T>G
  hgvsp: ENSP00000440722.1:p.Cys98Gly
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.265T>G
  hgvsp: ENSP00000437623.1:p.Cys89Gly
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19929T>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.244T>G
  hgvsp: ENSP00000445843.1:p.Cys82Gly
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.244T>G
  hgvsp: ENSP00000441650.1:p.Cys82Gly
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.119T>G
  hgvsp: ENSP00000404903.2:p.Cys41Gly
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  clinical significance: pathogenic
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.265T>G
  hgvsp: ENSP00000347324.3:p.Cys89Gly
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7323
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys89Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD

12-65722368-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722368
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722368
    reference: chr 12
allele count: 1
allele frequency: 8.250416646040625e-6
allele num: 121206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.269G>A
  hgvsp: ENSP00000437623.1:p.Gly90Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.294G>A
  hgvsp: ENSP00000440722.1:p.Gly99Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.248G>A
  hgvsp: ENSP00000441650.1:p.Gly83Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.248G>A
  hgvsp: ENSP00000442620.1:p.Gly83Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.248G>A
  hgvsp: ENSP00000312274.5:p.Gly83Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.123G>A
  hgvsp: ENSP00000404903.2:p.Gly42Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19933G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.248G>A
  hgvsp: ENSP00000445843.1:p.Gly83Glu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.269G>A
  hgvsp: ENSP00000347324.3:p.Gly90Glu
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23440
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13886
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly90Glu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

12-65722374-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722374
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722374
    reference: chr 12
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.254C>T
  hgvsp: ENSP00000445843.1:p.Pro85Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.254C>T
  hgvsp: ENSP00000442620.1:p.Pro85Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.300C>T
  hgvsp: ENSP00000440722.1:p.Pro101Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.254C>T
  hgvsp: ENSP00000441650.1:p.Pro85Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.275C>T
  hgvsp: ENSP00000437623.1:p.Pro92Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.275C>T
  hgvsp: ENSP00000347324.3:p.Pro92Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.254C>T
  hgvsp: ENSP00000312274.5:p.Pro85Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.129C>T
  hgvsp: ENSP00000404903.2:p.Pro44Leu
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19939C>T
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12678
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6541
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29849
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro92Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

12-65722395-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722395
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722395
    reference: chr 12
allele count: 2
allele frequency: 1.652728655009421e-5
allele num: 121012
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.284+12G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.263+12G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.263+12G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.138+12G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.309+12G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.284+12G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.263+12G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19960G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.263+12G>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13929
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22711
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3840
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6501
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

12-65722415-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722415
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722415
    reference: chr 12
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.263+32G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.309+32G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19980G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.284+32G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.263+32G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.263+32G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.263+32G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.284+32G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.138+32G>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19582
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25925
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

12-65722417-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722417
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722417
    reference: chr 12
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.263+34A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.263+34A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.284+34A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.138+34A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.263+34A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.309+34A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19982A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.284+34A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.263+34A>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18841
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

12-65722425-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722425
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722425
    reference: chr 12
allele count: 5
allele frequency: 4.1468309917561e-5
allele num: 120574
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.263+42T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.138+42T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.309+42T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.284+42T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.263+42T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.284+42T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.263+42T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19990T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.263+42T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7159
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16359
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12677
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2391
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5786
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

12-65722426-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65722426
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65722426
    reference: chr 12
allele count: 2
allele frequency: 1.659723490066555e-5
allele num: 120502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.263+43G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.263+43G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*89+19991G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.263+43G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.263+43G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.309+43G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.284+43G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.284+43G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.138+43G>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6253
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2241
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19418
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

12-65762729-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762729
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762729
    reference: chr 12
allele count: 1
allele frequency: 9.857266777068055e-6
allele num: 101448
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-49T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-49T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-49T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-49T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-49T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-49T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-49T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-49T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-49T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-49T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12779
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17730
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9411
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3447
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

12-65762731-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762731
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762731
    reference: chr 12
allele count: 1
allele frequency: 9.659222625763078e-6
allele num: 103528
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-47T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-47T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-47T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-47T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-47T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-47T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-47T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-47T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-47T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-47T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17117
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11020
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3012
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5689
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2587
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

12-65762734-T-TACAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762734
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762738
    reference: chr 12
allele count: 2
allele frequency: 1.927265018212654e-5
allele num: 103774
alternate allele: TACAA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-40_*90-37dupAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-40_310-37dupAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-40_264-37dupAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-40_264-37dupAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-40_264-37dupAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-40_264-37dupAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-40_285-37dupAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-40_139-37dupAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-40_103-37dupAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-40_285-37dupAACA
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15960
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7160
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

12-65762734-TACAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762734
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762730
    reference: chr 12
allele count: 5
allele frequency: 4.818162545531636e-5
allele num: 103774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-40_264-37delAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-40_*90-37delAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-40_310-37delAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-40_264-37delAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-40_103-37delAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-40_285-37delAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-40_285-37delAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-40_139-37delAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-40_264-37delAACA
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-40_264-37delAACA
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7160
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16089
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15960
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: TACAA
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

12-65762748-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762748
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762748
    reference: chr 12
allele count: 2
allele frequency: 1.822389882091375e-5
allele num: 109746
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-30A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-30A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-30A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-30A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-30A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-30A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-30A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-30A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-30A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-30A>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29823
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10234
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5710
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31371
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

12-65762749-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762749
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762749
    reference: chr 12
allele count: 3
allele frequency: 2.705383713590044e-5
allele num: 110890
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-29T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-29T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-29T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-29T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-29T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-29T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-29T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-29T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-29T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-29T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3745
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1834
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

12-65762756-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762756
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762756
    reference: chr 12
allele count: 1
allele frequency: 8.701705534284719e-6
allele num: 114920
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-22A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-22A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-22A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-22A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-22A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-22A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-22A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-22A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-22A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-22A>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34448
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

12-65762759-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762759
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762759
    reference: chr 12
allele count: 1
allele frequency: 8.6071852782703e-6
allele num: 116182
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-19A>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-19A>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-19A>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-19A>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-19A>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-19A>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-19A>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-19A>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-19A>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-19A>T
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4044
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2572
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

12-65762763-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762763
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762763
    reference: chr 12
allele count: 2
allele frequency: 1.703316356946976e-5
allele num: 117418
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-15T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-15T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-15T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-15T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-15T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-15T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-15T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-15T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-15T>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-15T>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40815
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6459
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

12-65762763-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762763
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762763
    reference: chr 12
allele count: 2
allele frequency: 1.703316356946976e-5
allele num: 117418
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-15T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-15T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-15T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-15T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-15T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-15T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-15T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-15T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-15T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-15T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6459
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

12-65762765-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762765
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762765
    reference: chr 12
allele count: 3
allele frequency: 2.543580004069728e-5
allele num: 117944
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-13T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-13T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-13T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-13T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-13T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-13T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-13T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-13T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-13T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-13T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36304
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

12-65762766-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762766
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762766
    reference: chr 12
allele count: 1
allele frequency: 8.462814393554721e-6
allele num: 118164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-12T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-12T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-12T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-12T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-12T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-12T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-12T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-12T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-12T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-12T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12807
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41561
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6437
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

12-65762773-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762773
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762773
    reference: chr 12
allele count: 3
allele frequency: 2.515807658118511e-5
allele num: 119246
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-5T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-5T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-5T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-5T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-5T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-5T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-5T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-5T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-5T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-5T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: c.285-5T>C
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

12-65762777-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762777
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762777
    reference: chr 12
allele count: 1
allele frequency: 8.362043014349267e-6
allele num: 119588
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285-1G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103-1G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285-1G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264-1G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264-1G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264-1G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310-1G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90-1G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264-1G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139-1G>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37077
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 9.25e1
  variant carriers: 0
hgvs: c.285-1G>A
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD

12-65762778-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762778
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762778
    reference: chr 12
allele count: 1
allele frequency: 8.358548287333457e-6
allele num: 119638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.264G>A
  hgvsp: ENST00000538045.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.310G>A
  hgvsp: ENST00000541189.1:c.310G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.264G>A
  hgvsp: ENST00000535239.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.264G>A
  hgvsp: ENST00000308259.5:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.103G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.285G>A
  hgvsp: ENST00000540804.1:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.139G>A
  hgvsp: ENST00000446731.2:c.139G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.285G>A
  hgvsp: ENST00000355192.3:c.285G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*90G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.264G>A
  hgvsp: ENST00000535664.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.285G>A
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

12-65762799-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762799
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762799
    reference: chr 12
allele count: 5
allele frequency: 4.175504818532561e-5
allele num: 119746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.285C>T
  hgvsp: ENST00000308259.5:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.124C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.285C>T
  hgvsp: ENST00000538045.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*111C>T
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.306C>T
  hgvsp: ENST00000540804.1:c.306C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.331C>T
  hgvsp: ENST00000541189.1:c.331C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.285C>T
  hgvsp: ENST00000535239.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.306C>T
  hgvsp: ENST00000355192.3:c.306C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.160C>T
  hgvsp: ENST00000446731.2:c.160C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.285C>T
  hgvsp: ENST00000535664.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4276
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser102Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS

12-65762800-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762800
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762800
    reference: chr 12
allele count: 2
allele frequency: 1.670090351888037e-5
allele num: 119754
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.307G>A
  hgvsp: ENSP00000437623.1:p.Gly103Ser
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.307G>A
  hgvsp: ENSP00000347324.3:p.Gly103Ser
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.332G>A
  hgvsp: ENSP00000440722.1:p.Gly112Ser
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.286G>A
  hgvsp: ENSP00000312274.5:p.Gly96Ser
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.125G>A
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.286G>A
  hgvsp: ENSP00000445843.1:p.Gly96Ser
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.286G>A
  hgvsp: ENSP00000441650.1:p.Gly96Ser
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.286G>A
  hgvsp: ENSP00000442620.1:p.Gly96Ser
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.161G>A
  hgvsp: ENSP00000404903.2:p.Gly55Ser
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*112G>A
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4285
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly103Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD

12-65762814-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762814
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762814
    reference: chr 12
allele count: 2
allele frequency: 1.675294432996599e-5
allele num: 119382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.131+8T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.167+8T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.338+8T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.292+8T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.313+8T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.292+8T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.292+8T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.292+8T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*118+8T>C
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.313+8T>C
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4271
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: c.313+8T>C
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD

12-65762817-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 65762817
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 65762817
    reference: chr 12
allele count: 58
allele frequency: 4.864302727364219e-4
allele num: 119236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000312274
  ensembl transcript: ENST00000308259
  gene symbol: MSRB3
  hgvsc: ENST00000308259.5:c.292+11A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000404903
  ensembl transcript: ENST00000446731
  gene symbol: MSRB3
  hgvsc: ENST00000446731.2:c.167+11A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000441650
  ensembl transcript: ENST00000535664
  gene symbol: MSRB3
  hgvsc: ENST00000535664.1:c.292+11A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl transcript: ENST00000535143
  gene symbol: MSRB3
  hgvsc: ENST00000535143.1:n.131+11A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000437623
  ensembl transcript: ENST00000540804
  gene symbol: MSRB3
  hgvsc: ENST00000540804.1:c.313+11A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000347324
  ensembl transcript: ENST00000355192
  gene symbol: MSRB3
  hgvsc: ENST00000355192.3:c.313+11A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000440722
  ensembl transcript: ENST00000541189
  gene symbol: MSRB3
  hgvsc: ENST00000541189.1:c.338+11A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000442620
  ensembl transcript: ENST00000538045
  gene symbol: MSRB3
  hgvsc: ENST00000538045.1:c.292+11A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445051
  ensembl transcript: ENST00000541897
  gene symbol: MSRB3
  hgvsc: ENST00000541897.1:c.*118+11A>G
  variant of: http://identifiers.org/hgnc/27375
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000174099
  ensembl protein: ENSP00000445843
  ensembl transcript: ENST00000535239
  gene symbol: MSRB3
  hgvsc: ENST00000535239.1:c.292+11A>G
  variant of: http://identifiers.org/hgnc/27375
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 4.25e1
  variant carriers: 3
num of homozygotes: 1
reference allele: A

GenotypeQuality
all individuals: 396
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45375
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4762
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3164
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551349674216568e-5
allele num: 64460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10932
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.45e-1

QD
type: SiteQuality
SIO_000300: 1.031e1

VQSLOD
type: SiteQuality
SIO_000300: -3.32e-1

DP
type: SiteQuality
SIO_000300: 1.51475e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.639e0

MQ
type: SiteQuality
SIO_000300: 5.89e1

GenotypeQuality
all individuals: 741
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4763
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45351
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10966
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.386634844868735e-4
allele num: 8380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15716
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.859e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: -2.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.629999999999999e-1

QD
type: SiteQuality
SIO_000300: 9.15e0

DP
type: SiteQuality
SIO_000300: 1.518154e6

GenotypeQuality
all individuals: 4763
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 328
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45680
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3199
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 475
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10988
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.091572373709269e-5
allele num: 64692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6406
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.436e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.68e-1

FS
type: SiteQuality
SIO_000300: 1.617e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

DP
type: SiteQuality
SIO_000300: 1.520082e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.114e1

MQ
type: SiteQuality
SIO_000300: 5.909e1

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2268
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45692
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 753
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 811
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3239
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4765
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.744958481613286e-4
allele num: 8430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64838
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.522583e6

FS
type: SiteQuality
SIO_000300: 6.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.98e0

QD
type: SiteQuality
SIO_000300: 1.227e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

GenotypeQuality
all individuals: 242
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1679
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4765
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 520
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3363
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15966
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527650473571647e-5
allele num: 65460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.63e-1

QD
type: SiteQuality
SIO_000300: 8.6e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 6.691e0

MQRankSum
type: SiteQuality
SIO_000300: -1.358e0

DP
type: SiteQuality
SIO_000300: 1.539906e6

VQSLOD
type: SiteQuality
SIO_000300: -2.631e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 308
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46608
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15996
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11208
num of homozygotes: 0

African
type: Population
allele count: 30
allele frequency: 2.994609702535436e-3
allele num: 10018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0

QD
type: SiteQuality
SIO_000300: 1.378e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.4e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 1.542822e6

FS
type: SiteQuality
SIO_000300: 5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.35e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4760
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.290890790135883e-5
allele num: 15896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 1.536569e6

VQSLOD
type: SiteQuality
SIO_000300: 5.05e-1

QD
type: SiteQuality
SIO_000300: 1.236e1

FS
type: SiteQuality
SIO_000300: 6.481e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 45459
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.004823151125402e-4
allele num: 9952
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169043722235212e-4
allele num: 8554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15882
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.794687724335966e-4
allele num: 11144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534071733194244e-5
allele num: 65186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.83e0

MQRankSum
type: SiteQuality
SIO_000300: 6.73e-1

DP
type: SiteQuality
SIO_000300: 1.536122e6

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

FS
type: SiteQuality
SIO_000300: 3.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 776
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11146
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.299609424215698e-5
allele num: 15874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9956
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.546e0

VQSLOD
type: SiteQuality
SIO_000300: 2.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

QD
type: SiteQuality
SIO_000300: 1.19e1

DP
type: SiteQuality
SIO_000300: 1.536389e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.38e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 45014
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11094
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539693293096015e-5
allele num: 64948
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.505e0

MQRankSum
type: SiteQuality
SIO_000300: -5.28e-1

DP
type: SiteQuality
SIO_000300: 1.529184e6

VQSLOD
type: SiteQuality
SIO_000300: -7.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.967e0

QD
type: SiteQuality
SIO_000300: 1.288e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.91e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11076
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540879534038029e-5
allele num: 64898
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.077e0

MQRankSum
type: SiteQuality
SIO_000300: -7.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

MQ
type: SiteQuality
SIO_000300: 5.87e1

DP
type: SiteQuality
SIO_000300: 1.528794e6

QD
type: SiteQuality
SIO_000300: 5.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: -2.284e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.37e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15792
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64826
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.00928542591845e-4
allele num: 9908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.911e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -8.065e-1

DP
type: SiteQuality
SIO_000300: 1.527549e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.102e0

QD
type: SiteQuality
SIO_000300: 8.98e0

FS
type: SiteQuality
SIO_000300: 1.719e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15750
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.062896501721951e-5
allele num: 11034
num of homozygotes: 0

Other
type: Population
allele count: 0
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BaseQRankSum
type: SiteQuality
SIO_000300: -8.21e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.522564e6

MQRankSum
type: SiteQuality
SIO_000300: 6.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 4.455e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 23
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.26984126984127e-4
allele num: 15750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64572
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.68e-1

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.455e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.522564e6

QD
type: SiteQuality
SIO_000300: 8.869999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

GenotypeQuality
all individuals: 254
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1961
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.498583073855088e-5
allele num: 57166
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

FS
type: SiteQuality
SIO_000300: 1.463e0

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

DP
type: SiteQuality
SIO_000300: 1.342371e6

QD
type: SiteQuality
SIO_000300: 1.22e1

GenotypeQuality
all individuals: 383
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4850
bin: 9.75e1
variant carriers: 117

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7616
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.088118605136772e-4
allele num: 9578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5736
num of homozygotes: 0

South Asian
type: Population
allele count: 34
allele frequency: 2.344180915609487e-3
allele num: 14504
num of homozygotes: 0

African
type: Population
allele count: 83
allele frequency: 9.332134022936811e-3
allele num: 8894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57166
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.463e0

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

QD
type: SiteQuality
SIO_000300: 1.22e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.14e-1

DP
type: SiteQuality
SIO_000300: 1.342371e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.144688644688645e-4
allele num: 8736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.785076758300607e-5
allele num: 56020
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7474
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.717e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.0132e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

QD
type: SiteQuality
SIO_000300: 1.24e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.137e0

DP
type: SiteQuality
SIO_000300: 1.311642e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.342143906020558e-5
allele num: 13620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5234
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.965022597759874e-5
allele num: 50890
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.724e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

DP
type: SiteQuality
SIO_000300: 1.167929e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e0

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

QD
type: SiteQuality
SIO_000300: 1.309e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.027903958468527e-5
allele num: 49312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5092
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7916
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7836
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.571e1

VQSLOD
type: SiteQuality
SIO_000300: -7.079e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

DP
type: SiteQuality
SIO_000300: 1.121467e6

QD
type: SiteQuality
SIO_000300: 1.956e1

GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7830
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.034091371384403e-5
allele num: 49162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13342
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.12077e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.163e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

QD
type: SiteQuality
SIO_000300: 1.378e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13250
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7842
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.055329469313931e-5
allele num: 48654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.29e-1

DP
type: SiteQuality
SIO_000300: 1.111028e6

QD
type: SiteQuality
SIO_000300: 9.27e0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.080472683393667e-5
allele num: 48066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7582
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.39e-1

QD
type: SiteQuality
SIO_000300: 2.19e1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.597e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.089343e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.381e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 335
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 321
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GenotypeQuality
all individuals: 457
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GenotypeQuality
all individuals: 462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.345558838866679e-5
allele num: 46024
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.8064012490242e-5
allele num: 12810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.334e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: 2.82e0

FS
type: SiteQuality
SIO_000300: 2.443e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.06e-1

DP
type: SiteQuality
SIO_000300: 1.039709e6

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.8064012490242e-5
allele num: 12810
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7228
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.443e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.56e-1

DP
type: SiteQuality
SIO_000300: 1.039709e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
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SIO_000300: 2.82e0

QD
type: SiteQuality
SIO_000300: 1.334e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.06e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.567889620570712e-4
allele num: 6378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6938
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41702
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.733e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.62392e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

FS
type: SiteQuality
SIO_000300: 4.472e0

MQRankSum
type: SiteQuality
SIO_000300: -5.33e-1

QD
type: SiteQuality
SIO_000300: 1.776e1

VQSLOD
type: SiteQuality
SIO_000300: -6.844e-1

GenotypeQuality
all individuals: 310
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5237
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variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4962
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

VQSLOD
type: SiteQuality
SIO_000300: -1.122e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.29e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

FS
type: SiteQuality
SIO_000300: 8.645e0

DP
type: SiteQuality
SIO_000300: 9.16292e5

GenotypeQuality
all individuals: 632
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 298
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variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3856
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.004141905276428e-5
allele num: 11106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33936
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4472
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.86699e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.49e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.099e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e0

FS
type: SiteQuality
SIO_000300: 5.016e0

QD
type: SiteQuality
SIO_000300: 1.459e1

MQRankSum
type: SiteQuality
SIO_000300: 5.44e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10820
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.377555872563005e-4
allele num: 4206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3708
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4226
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.77657e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.69e-2

QD
type: SiteQuality
SIO_000300: 1.256e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9982
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532191340054546e-5
allele num: 65266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.527e1

VQSLOD
type: SiteQuality
SIO_000300: 4.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.951136e6

MQ
type: SiteQuality
SIO_000300: 5.892e1

GenotypeQuality
all individuals: 883
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 1120
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531487380543984e-5
allele num: 65296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16366
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.93e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.122e0

MQ
type: SiteQuality
SIO_000300: 5.884e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65872
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.76e0

FS
type: SiteQuality
SIO_000300: 1.65e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-1

BaseQRankSum
type: SiteQuality
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GenotypeQuality
all individuals: 6515
bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010869237948996e-5
allele num: 66426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.78e-1

ClippingRankSum
type: SiteQuality
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QD
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SIO_000300: 1.285e1

DP
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SIO_000300: 1.994823e6

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

VQSLOD
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BaseQRankSum
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SIO_000300: 8.699999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.769441187964049e-5
allele num: 10236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66426
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.78e-1

ClippingRankSum
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SIO_000300: 4.24e-1

QD
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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SIO_000300: 1.994823e6

MQRankSum
type: SiteQuality
SIO_000300: 3.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504709741490866e-5
allele num: 66458
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: -8.110000000000001e-1

DP
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ReadPosRankSum
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MQ
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BaseQRankSum
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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FS
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SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.74089226573154e-5
allele num: 10266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.93e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.129e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-2

FS
type: SiteQuality
SIO_000300: 1.2026e1

MQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

QD
type: SiteQuality
SIO_000300: 1.334e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.996159e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503216884132043e-5
allele num: 66524
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
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SIO_000300: 1.997676e6

MQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.603e0

VQSLOD
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SIO_000300: -5.121e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.36e0

ReadPosRankSum
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SIO_000300: -1.989e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.97e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

East Asian
type: Population
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Other
type: Population
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.909e1

BaseQRankSum
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InbreedingCoeff
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SIO_000300: 4.9e-3

DP
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.35e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
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SIO_000300: 1.28e0

MQ
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FS
type: SiteQuality
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ReadPosRankSum
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MQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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South Asian
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Latino
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allele frequency: 2.597852441981296e-4
allele num: 11548
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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FS
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VQSLOD
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DP
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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BaseQRankSum
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ClippingRankSum
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FS
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DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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QD
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VQSLOD
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MQ
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SIO_000300: 5.833e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.050010500105001e-4
allele num: 66666
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQ
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DP
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele num: 904
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East Asian
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African
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allele frequency: 9.632055480639569e-5
allele num: 10382
num of homozygotes: 0

Latino
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allele frequency: 7.794907327212888e-4
allele num: 11546
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South Asian
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allele frequency: 3.028834504482675e-4
allele num: 16508
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.00048007681229e-5
allele num: 66656
num of homozygotes: 0

MQ
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FS
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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VQSLOD
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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East Asian
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allele frequency: 4.626416840157298e-4
allele num: 8646
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South Asian
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Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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FS
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SIO_000300: 1.0959e1

ClippingRankSum
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SIO_000300: -2.93e-1

DP
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 1.817520901490367e-4
allele num: 16506
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African
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allele frequency: 0.0e0
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Other
type: Population
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MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
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QD
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ClippingRankSum
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FS
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DP
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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Other
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Latino
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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FS
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VQSLOD
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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DP
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FS
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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MQ
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.112e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.218e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

DP
type: SiteQuality
SIO_000300: 1.973151e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.584e0

VQSLOD
type: SiteQuality
SIO_000300: 6.64e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507431637975218e-5
allele num: 66338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

FS
type: SiteQuality
SIO_000300: 1.481e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.966003e6

QD
type: SiteQuality
SIO_000300: 1.378e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66218
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.359958144401814e-4
allele num: 11468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.941557e6

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.288e0

FS
type: SiteQuality
SIO_000300: 3.329e0

QD
type: SiteQuality
SIO_000300: 1.23e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.49e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2386
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.215214485356665e-4
allele num: 16458
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.81e-1

QD
type: SiteQuality
SIO_000300: 1.219e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

MQRankSum
type: SiteQuality
SIO_000300: 9.52e-1

DP
type: SiteQuality
SIO_000300: 1.939876e6

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 731
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.943480072212192e-5
allele num: 14402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7590
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.906e1

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

QD
type: SiteQuality
SIO_000300: 9.199999999999999e0

FS
type: SiteQuality
SIO_000300: 2.522e0

VQSLOD
type: SiteQuality
SIO_000300: -2.187e-1

DP
type: SiteQuality
SIO_000300: 1.169284e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.954e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8922
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.802321389950256e-5
allele num: 55484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14690
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.424e0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: 5.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.214e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.215758e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10010
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.594277909567968e-5
allele num: 55644
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.59e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.997002997002997e-4
allele num: 10010
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.594277909567968e-5
allele num: 55644
num of homozygotes: 0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.957e1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2077
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GenotypeQuality
all individuals: 1911
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6044
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8162
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.367343502710711e-5
allele num: 59394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15348
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQ
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VQSLOD
type: SiteQuality
SIO_000300: -3.899e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.585e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 15444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 60062
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10784
num of homozygotes: 0

African
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allele count: 3
allele frequency: 3.221649484536082e-4
allele num: 9312
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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FS
type: SiteQuality
SIO_000300: 2.293e0

BaseQRankSum
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SIO_000300: 2.21e0

InbreedingCoeff
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SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-1

ReadPosRankSum
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SIO_000300: 5.9e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.594794590456749e-5
allele num: 62704
num of homozygotes: 0

VQSLOD
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DP
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MQ
type: SiteQuality
SIO_000300: 5.682e1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.68e0

QD
type: SiteQuality
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MQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.37e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15984
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9658
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.574208173288836e-5
allele num: 63524
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.071e1

MQRankSum
type: SiteQuality
SIO_000300: 2.18e0

FS
type: SiteQuality
SIO_000300: 1.377e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.042e0

ClippingRankSum
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SIO_000300: -1.783e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.74e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16094
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.345765892563922e-4
allele num: 8526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64384
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.27e-1

MQ
type: SiteQuality
SIO_000300: 5.816e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.063e-1

QD
type: SiteQuality
SIO_000300: 1.38e1

MQRankSum
type: SiteQuality
SIO_000300: 6.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.376e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.580508e6

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 2
allele frequency: 2.052123948286476e-4
allele num: 9746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64384
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11286
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16094
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.816e1

MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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SIO_000300: -1.063e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.635352286773795e-5
allele num: 64720
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16166
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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QD
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FS
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 892
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.541592156379108e-5
allele num: 64868
num of homozygotes: 0

East Asian
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VQSLOD
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MQ
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InbreedingCoeff
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.575960951799878e-5
allele num: 65560
num of homozygotes: 0

African
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East Asian
type: Population
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allele frequency: 0.0e0
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Latino
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Other
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QD
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
type: SiteQuality
SIO_000300: 5.884e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.18e-1

DP
type: SiteQuality
SIO_000300: 1.60229e6

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

GenotypeQuality
all individuals: 6462
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42634
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3256
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2086
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65792
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.558e0

VQSLOD
type: SiteQuality
SIO_000300: -2.5e0

MQ
type: SiteQuality
SIO_000300: 5.775e1

MQRankSum
type: SiteQuality
SIO_000300: -2.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.286e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

DP
type: SiteQuality
SIO_000300: 1.60716e6

FS
type: SiteQuality
SIO_000300: 2.571e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 5.07e0

GenotypeDepth
all individuals: 714
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 661
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6465
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42696
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1379
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3255
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9950
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.88e-1

FS
type: SiteQuality
SIO_000300: 6.881e0

DP
type: SiteQuality
SIO_000300: 1.607572e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.612e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.359999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-1

QD
type: SiteQuality
SIO_000300: 1.439e1

VQSLOD
type: SiteQuality
SIO_000300: -1.483e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

GenotypeQuality
all individuals: 1006
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3260
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1376
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6454
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42291
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.016064257028113e-4
allele num: 9960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.730574471800244e-5
allele num: 11454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.68e-1

DP
type: SiteQuality
SIO_000300: 1.608211e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

MQ
type: SiteQuality
SIO_000300: 5.888e1

QD
type: SiteQuality
SIO_000300: 9.65e0

MQRankSum
type: SiteQuality
SIO_000300: 7.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 3.268e0

GenotypeQuality
all individuals: 2176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3257
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6464
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42297
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.729050279329609e-5
allele num: 11456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.003613006824568e-4
allele num: 9964
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.607971e6

VQSLOD
type: SiteQuality
SIO_000300: -5.864e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 5.885e1

FS
type: SiteQuality
SIO_000300: 7.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.87e-1

QD
type: SiteQuality
SIO_000300: 9.1e0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41269
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 6357
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1628
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
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variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2046
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3258
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 656
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.224589762429586e-4
allele num: 16332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65618
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.892e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
type: SiteQuality
SIO_000300: -5.057e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.057e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

FS
type: SiteQuality
SIO_000300: 4.464e0

MQRankSum
type: SiteQuality
SIO_000300: 9.72e-1

DP
type: SiteQuality
SIO_000300: 1.598342e6

QD
type: SiteQuality
SIO_000300: 1.084e1