16-71885541-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885541
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885541
    reference: chr 16
allele count: 1
allele frequency: 7.489514679448772e-5
allele num: 13352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3567G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3567G>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.1898G>A
  hgvsp: ENSP00000415822.2:p.Arg633His
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4204
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3002
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg633His
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

16-71885570-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885570
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885570
    reference: chr 16
allele count: 1
allele frequency: 9.061254077564335e-5
allele num: 11036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3596G>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.1927G>C
  hgvsp: ENSP00000415822.2:p.Gly643Arg
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3596G>C
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3656
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly643Arg
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

16-71885583-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885583
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885583
    reference: chr 16
allele count: 2
allele frequency: 1.950838860710105e-4
allele num: 10252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3609G>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3609G>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.1940G>T
  hgvsp: ENSP00000415822.2:p.Cys647Phe
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Cys647Phe
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-71885641-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885641
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885641
    reference: chr 16
allele count: 3
allele frequency: 3.783102143757881e-4
allele num: 7930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3667G>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3667G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.1998G>A
  hgvsp: ENST00000427980.2:c.1998G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala666Ala
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/16-71885683-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885683
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885683
    reference: chr 16
allele count: 1
allele frequency: 1.323451561672843e-4
allele num: 7556
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.2040C>A
  hgvsp: ENST00000427980.2:c.2040C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3709C>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3709C>A
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3801
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1219
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser680Ser
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/16-71885715-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885715
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885715
    reference: chr 16
allele count: 1
allele frequency: 1.423284941645317e-4
allele num: 7026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3741C>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.*2C>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3741C>A
  variant of: http://identifiers.org/hgnc/28977
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-71885716-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885716
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885716
    reference: chr 16
allele count: 1
allele frequency: 1.423284941645317e-4
allele num: 7026
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3742C>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.*3C>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3742C>G
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2784
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 416
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 50
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 227
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 335
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 101
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

16-71885718-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885718
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885718
    reference: chr 16
allele count: 2
allele frequency: 2.857142857142857e-4
allele num: 7000
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.*5C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3744C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3744C>T
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 604
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1493
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1116
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 338
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 63
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 52
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genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-71885728-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885728
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885728
    reference: chr 16
allele count: 1
allele frequency: 1.474491300501327e-4
allele num: 6782
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3754C>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.*15C>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3754C>G
  variant of: http://identifiers.org/hgnc/28977
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2723
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

16-71885751-A-AGCCTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885751
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885756
    reference: chr 16
allele count: 1
allele frequency: 1.622323166774821e-4
allele num: 6164
alternate allele: AGCCTC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3786_-16+3790dupTCGCC
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.*47_*51dupTCGCC
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3786_119+3790dupTCGCC
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2803
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 772
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

16-71885756-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71885756
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71885756
    reference: chr 16
allele count: 1
allele frequency: 1.890359168241966e-4
allele num: 5290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+3782C>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+3782C>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000224470
  ensembl protein: ENSP00000415822
  ensembl transcript: ENST00000427980
  gene symbol: ATXN1L
  hgvsc: ENST00000427980.2:c.*43C>G
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

16-71893876-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893876
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893876
    reference: chr 16
allele count: 1
allele frequency: 2.533056385835149e-5
allele num: 39478
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11902G>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.*45C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1114C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*949C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*697C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.*45C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11902G>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.*45C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.*45C>G
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11978
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3109
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4935
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19964
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

16-71893877-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893877
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893877
    reference: chr 16
allele count: 2
allele frequency: 5.025125628140704e-5
allele num: 39800
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.*44C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1113C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11903G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.*44C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.*44C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*696C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11903G>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*948C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.*44C>T
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14244
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27578
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11826
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4733
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9337
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

16-71893887-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893887
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893887
    reference: chr 16
allele count: 1
allele frequency: 2.271281911510857e-5
allele num: 44028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11913T>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.*34A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1103A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.*34A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.*34A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*938A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*686A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11913T>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.*34A>G
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2247
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5551
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

16-71893898-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893898
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893898
    reference: chr 16
allele count: 0
allele frequency: 0.0e0
allele num: 54228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*927C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11924G>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.*23C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*675C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.*23C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.*23C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1092C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11924G>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.*23C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1092C>G
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4569
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28178
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

16-71893901-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893901
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893901
    reference: chr 16
allele count: 1
allele frequency: 1.760501390796099e-5
allele num: 56802
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.*20C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11927G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.*20C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1089C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.*20C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1089C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.*20C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*924C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*672C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11927G>A
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11885
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4688
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27191
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

16-71893905-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893905
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893905
    reference: chr 16
allele count: 1
allele frequency: 1.633826749011535e-5
allele num: 61206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.*16C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*668C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11931G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.*16C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1085C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.*16C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.*16C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1085C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*920C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11931G>A
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26175
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

16-71893910-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893910
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893910
    reference: chr 16
allele count: 1
allele frequency: 1.460109800256979e-5
allele num: 68488
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.*11C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*915C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11936G>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*663C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.*11C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1080C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1080C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.*11C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.*11C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11936G>C
  variant of: http://identifiers.org/hgnc/28977
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19278
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24244
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3400
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

16-71893921-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893921
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893921
    reference: chr 16
allele count: 1
allele frequency: 1.177107611177814e-5
allele num: 84954
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1069A>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1239A>C
  hgvsp: ENSP00000455648.1:p.Ter413CysextTer57
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1113A>C
  hgvsp: ENSP00000405908.2:p.Ter371CysextTer57
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: stop_lost
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1239A>C
  hgvsp: ENSP00000398089.1:p.Ter413CysextTer57
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*652A>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*904A>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1113A>C
  hgvsp: ENSP00000313822.6:p.Ter371CysextTer57
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1069A>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11947T>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11947T>G
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27982
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6033
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29546
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ter413CysextTer57
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

16-71893929-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893929
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893929
    reference: chr 16
allele count: 1
allele frequency: 1.043231513937573e-5
allele num: 95856
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1231C>G
  hgvsp: ENSP00000455648.1:p.Leu411Val
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*644C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11955G>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*896C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1105C>G
  hgvsp: ENSP00000405908.2:p.Leu369Val
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1231C>G
  hgvsp: ENSP00000398089.1:p.Leu411Val
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1061C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1061C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11955G>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1105C>G
  hgvsp: ENSP00000313822.6:p.Leu369Val
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33832
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu411Val
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS

16-71893937-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893937
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893937
    reference: chr 16
allele count: 2
allele frequency: 1.925261354228837e-5
allele num: 103882
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1097G>A
  hgvsp: ENSP00000405908.2:p.Ser366Asn
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1053G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1097G>A
  hgvsp: ENSP00000313822.6:p.Ser366Asn
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1223G>A
  hgvsp: ENSP00000398089.1:p.Ser408Asn
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11963C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*888G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1223G>A
  hgvsp: ENSP00000455648.1:p.Ser408Asn
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1053G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11963C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*636G>A
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8547
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser408Asn
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

16-71893941-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893941
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893941
    reference: chr 16
allele count: 1
allele frequency: 9.31619154089808e-6
allele num: 107340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1093A>G
  hgvsp: ENSP00000313822.6:p.Asn365Asp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1093A>G
  hgvsp: ENSP00000405908.2:p.Asn365Asp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*884A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1219A>G
  hgvsp: ENSP00000455648.1:p.Asn407Asp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11967T>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1219A>G
  hgvsp: ENSP00000398089.1:p.Asn407Asp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1049A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1049A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*632A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11967T>C
  variant of: http://identifiers.org/hgnc/28977
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn407Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

16-71893942-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893942
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893942
    reference: chr 16
allele count: 1
allele frequency: 9.268527787046306e-6
allele num: 107892
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1048G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1092G>C
  hgvsp: ENSP00000405908.2:p.Gln364His
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1218G>C
  hgvsp: ENSP00000398089.1:p.Gln406His
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11968C>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1218G>C
  hgvsp: ENSP00000455648.1:p.Gln406His
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*883G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*631G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1092G>C
  hgvsp: ENSP00000313822.6:p.Gln364His
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11968C>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1048G>C
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40257
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6476
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44846
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln406His
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

16-71893954-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893954
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893954
    reference: chr 16
allele count: 1
allele frequency: 8.750284384242488e-6
allele num: 114282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1206C>G
  hgvsp: ENST00000565601.1:c.1206C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11980G>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1206C>G
  hgvsp: ENST00000568666.1:c.1206C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1036C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1080C>G
  hgvsp: ENST00000313565.6:c.1080C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*871C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*619C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1080C>G
  hgvsp: ENST00000446827.2:c.1080C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11980G>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1206C>G
  hgvsp: ENST00000425432.1:c.1206C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1036C>G
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10255
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala402Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

16-71893957-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893957
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893957
    reference: chr 16
allele count: 1
allele frequency: 8.670319761392799e-6
allele num: 115336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1077G>A
  hgvsp: ENSP00000313822.6:p.Met359Ile
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1203G>A
  hgvsp: ENSP00000398089.1:p.Met401Ile
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1033G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+11983C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1203G>A
  hgvsp: ENSP00000455648.1:p.Met401Ile
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*868G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1203G>A
  hgvsp: ENSP00000456563.1:p.Met401Ile
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1033G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1077G>A
  hgvsp: ENSP00000405908.2:p.Met359Ile
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+11983C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*616G>A
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met401Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

16-71893981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893981
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893981
    reference: chr 16
allele count: 1146
allele frequency: 9.549840835986067e-3
allele num: 120002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*844G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1009G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12007C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*592G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1053G>A
  hgvsp: ENST00000313565.6:c.1053G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1179G>A
  hgvsp: ENST00000565601.1:c.1179G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1179G>A
  hgvsp: ENST00000568666.1:c.1179G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1053G>A
  hgvsp: ENST00000446827.2:c.1053G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1179G>A
  hgvsp: ENST00000425432.1:c.1179G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12007C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1009G>A
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.25e1
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12539
  bin: 2.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.75e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 42880
  bin: 2.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 3.25e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.25e1
  variant carriers: 128
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 4.75e1
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
hgvs: p.Leu393Leu
num of homozygotes: 13
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

16-71893982-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893982
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893982
    reference: chr 16
allele count: 1
allele frequency: 8.322375538873816e-6
allele num: 120158
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1008T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1008T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*843T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1052T>C
  hgvsp: ENSP00000405908.2:p.Leu351Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*591T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1052T>C
  hgvsp: ENSP00000313822.6:p.Leu351Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1178T>C
  hgvsp: ENSP00000456563.1:p.Leu393Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1178T>C
  hgvsp: ENSP00000398089.1:p.Leu393Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1178T>C
  hgvsp: ENSP00000455648.1:p.Leu393Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12008A>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12008A>G
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu393Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

16-71893987-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893987
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893987
    reference: chr 16
allele count: 1
allele frequency: 8.300821781356355e-6
allele num: 120470
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1173G>A
  hgvsp: ENST00000425432.1:c.1173G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1173G>A
  hgvsp: ENST00000568666.1:c.1173G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12013C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12013C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*586G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1047G>A
  hgvsp: ENST00000446827.2:c.1047G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1003G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*838G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1003G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1173G>A
  hgvsp: ENST00000565601.1:c.1173G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1047G>A
  hgvsp: ENST00000313565.6:c.1047G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val391Val
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-71893989-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893989
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893989
    reference: chr 16
allele count: 38
allele frequency: 3.14981515558429e-4
allele num: 120642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1045G>T
  hgvsp: ENSP00000313822.6:p.Val349Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1171G>T
  hgvsp: ENSP00000456563.1:p.Val391Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1001G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12015C>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1171G>T
  hgvsp: ENSP00000455648.1:p.Val391Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*836G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1001G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12015C>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1045G>T
  hgvsp: ENSP00000405908.2:p.Val349Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*584G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1171G>T
  hgvsp: ENSP00000398089.1:p.Val391Leu
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43006
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13435
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val391Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

16-71893989-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893989
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893989
    reference: chr 16
allele count: 1
allele frequency: 8.288987251537607e-6
allele num: 120642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1045G>A
  hgvsp: ENSP00000405908.2:p.Val349Met
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1171G>A
  hgvsp: ENSP00000398089.1:p.Val391Met
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*1001G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1171G>A
  hgvsp: ENSP00000456563.1:p.Val391Met
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1045G>A
  hgvsp: ENSP00000313822.6:p.Val349Met
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1171G>A
  hgvsp: ENSP00000455648.1:p.Val391Met
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12015C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*836G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*584G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*1001G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12015C>T
  variant of: http://identifiers.org/hgnc/28977
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val391Met
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

16-71893993-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893993
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893993
    reference: chr 16
allele count: 1
allele frequency: 8.271982794275789e-6
allele num: 120890
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1167T>C
  hgvsp: ENST00000425432.1:c.1167T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12019A>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1167T>C
  hgvsp: ENST00000568666.1:c.1167T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*997T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12019A>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1041T>C
  hgvsp: ENST00000446827.2:c.1041T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*580T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1167T>C
  hgvsp: ENST00000565601.1:c.1167T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*997T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1041T>C
  hgvsp: ENST00000313565.6:c.1041T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*832T>C
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42973
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser389Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/16-71893999-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71893999
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71893999
    reference: chr 16
allele count: 1
allele frequency: 8.260230295220631e-6
allele num: 121062
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*574T>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1161T>G
  hgvsp: ENST00000425432.1:c.1161T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1035T>G
  hgvsp: ENST00000313565.6:c.1035T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1035T>G
  hgvsp: ENST00000446827.2:c.1035T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1161T>G
  hgvsp: ENST00000565601.1:c.1161T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*991T>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*826T>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*991T>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1161T>G
  hgvsp: ENST00000568666.1:c.1161T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12025A>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12025A>C
  variant of: http://identifiers.org/hgnc/28977
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro387Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

16-71894002-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894002
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894002
    reference: chr 16
allele count: 1
allele frequency: 8.256820133430213e-6
allele num: 121112
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*571G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1158G>A
  hgvsp: ENST00000565601.1:c.1158G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12028C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1158G>A
  hgvsp: ENST00000425432.1:c.1158G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*823G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1158G>A
  hgvsp: ENST00000568666.1:c.1158G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1032G>A
  hgvsp: ENST00000313565.6:c.1032G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*988G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1032G>A
  hgvsp: ENST00000446827.2:c.1032G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12028C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*988G>A
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu386Leu
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

16-71894008-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894008
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894008
    reference: chr 16
allele count: 1
allele frequency: 8.250280509537325e-6
allele num: 121208
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1152C>A
  hgvsp: ENSP00000398089.1:p.Phe384Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12034G>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*565C>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*817C>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1152C>A
  hgvsp: ENSP00000456563.1:p.Phe384Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.1026C>A
  hgvsp: ENSP00000313822.6:p.Phe342Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*982C>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1152C>A
  hgvsp: ENSP00000455648.1:p.Phe384Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*982C>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12034G>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.1026C>A
  hgvsp: ENSP00000405908.2:p.Phe342Leu
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13952
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe384Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

16-71894035-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894035
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894035
    reference: chr 16
allele count: 2
allele frequency: 1.649185302460584e-5
allele num: 121272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12061T>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*790A>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.999A>T
  hgvsp: ENST00000313565.6:c.999A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1125A>T
  hgvsp: ENST00000568666.1:c.1125A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.999A>T
  hgvsp: ENST00000446827.2:c.999A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12061T>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*955A>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1125A>T
  hgvsp: ENST00000565601.1:c.1125A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1125A>T
  hgvsp: ENST00000425432.1:c.1125A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*955A>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*538A>T
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala375Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

16-71894037-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894037
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894037
    reference: chr 16
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.997G>A
  hgvsp: ENSP00000313822.6:p.Ala333Thr
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*953G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*536G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12063C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.997G>A
  hgvsp: ENSP00000405908.2:p.Ala333Thr
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1123G>A
  hgvsp: ENSP00000456563.1:p.Ala375Thr
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*953G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1123G>A
  hgvsp: ENSP00000455648.1:p.Ala375Thr
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1123G>A
  hgvsp: ENSP00000398089.1:p.Ala375Thr
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*788G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12063C>T
  variant of: http://identifiers.org/hgnc/28977
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala375Thr
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/16-71894038-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894038
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894038
    reference: chr 16
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*952G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.996G>T
  hgvsp: ENSP00000405908.2:p.Met332Ile
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*952G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*535G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.996G>T
  hgvsp: ENSP00000313822.6:p.Met332Ile
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12064C>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1122G>T
  hgvsp: ENSP00000455648.1:p.Met374Ile
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1122G>T
  hgvsp: ENSP00000398089.1:p.Met374Ile
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1122G>T
  hgvsp: ENSP00000456563.1:p.Met374Ile
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*787G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12064C>A
  variant of: http://identifiers.org/hgnc/28977
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met374Ile
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-71894044-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894044
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894044
    reference: chr 16
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*946T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.990T>C
  hgvsp: ENST00000313565.6:c.990T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*529T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.990T>C
  hgvsp: ENST00000446827.2:c.990T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1116T>C
  hgvsp: ENST00000568666.1:c.1116T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1116T>C
  hgvsp: ENST00000565601.1:c.1116T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*946T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1116T>C
  hgvsp: ENST00000425432.1:c.1116T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12070A>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12070A>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*781T>C
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser372Ser
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

16-71894049-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894049
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894049
    reference: chr 16
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*776C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12075G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1111C>T
  hgvsp: ENSP00000455648.1:p.Pro371Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1111C>T
  hgvsp: ENSP00000398089.1:p.Pro371Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*941C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.985C>T
  hgvsp: ENSP00000313822.6:p.Pro329Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12075G>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.985C>T
  hgvsp: ENSP00000405908.2:p.Pro329Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1111C>T
  hgvsp: ENSP00000456563.1:p.Pro371Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*941C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*524C>T
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42798
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro371Ser
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-71894050-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894050
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894050
    reference: chr 16
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1110C>G
  hgvsp: ENSP00000398089.1:p.Asp370Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12076G>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1110C>G
  hgvsp: ENSP00000456563.1:p.Asp370Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12076G>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.984C>G
  hgvsp: ENSP00000405908.2:p.Asp328Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.984C>G
  hgvsp: ENSP00000313822.6:p.Asp328Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*523C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1110C>G
  hgvsp: ENSP00000455648.1:p.Asp370Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*775C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*940C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*940C>G
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp370Glu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ

16-71894053-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894053
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894053
    reference: chr 16
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*937G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*520G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12079C>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12079C>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1107G>C
  hgvsp: ENSP00000456563.1:p.Gln369His
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1107G>C
  hgvsp: ENSP00000455648.1:p.Gln369His
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.981G>C
  hgvsp: ENSP00000405908.2:p.Gln327His
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1107G>C
  hgvsp: ENSP00000398089.1:p.Gln369His
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*772G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*937G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.981G>C
  hgvsp: ENSP00000313822.6:p.Gln327His
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gln369His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

16-71894055-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894055
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894055
    reference: chr 16
allele count: 28
allele frequency: 2.309125995810586e-4
allele num: 121258
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*935C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.979C>G
  hgvsp: ENSP00000405908.2:p.Gln327Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1105C>G
  hgvsp: ENSP00000398089.1:p.Gln369Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*518C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12081G>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*770C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1105C>G
  hgvsp: ENSP00000455648.1:p.Gln369Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.979C>G
  hgvsp: ENSP00000313822.6:p.Gln327Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1105C>G
  hgvsp: ENSP00000456563.1:p.Gln369Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12081G>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*935C>G
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gln369Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

16-71894070-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894070
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894070
    reference: chr 16
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12096G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.964C>T
  hgvsp: ENSP00000313822.6:p.Arg322Ter
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.964C>T
  hgvsp: ENSP00000405908.2:p.Arg322Ter
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*755C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12096G>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*920C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1090C>T
  hgvsp: ENSP00000398089.1:p.Arg364Ter
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1090C>T
  hgvsp: ENSP00000456563.1:p.Arg364Ter
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1090C>T
  hgvsp: ENSP00000455648.1:p.Arg364Ter
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*920C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*503C>T
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg364Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

16-71894079-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894079
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894079
    reference: chr 16
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.955A>G
  hgvsp: ENSP00000405908.2:p.Met319Val
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1081A>G
  hgvsp: ENSP00000456563.1:p.Met361Val
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*746A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12105T>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1081A>G
  hgvsp: ENSP00000455648.1:p.Met361Val
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*494A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.955A>G
  hgvsp: ENSP00000313822.6:p.Met319Val
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1081A>G
  hgvsp: ENSP00000398089.1:p.Met361Val
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*911A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*911A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12105T>C
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met361Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

16-71894086-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894086
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894086
    reference: chr 16
allele count: 5
allele frequency: 4.125616779708567e-5
allele num: 121194
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*487A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1074A>G
  hgvsp: ENST00000425432.1:c.1074A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*904A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12112T>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.948A>G
  hgvsp: ENST00000313565.6:c.948A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12112T>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*904A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.948A>G
  hgvsp: ENST00000446827.2:c.948A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1074A>G
  hgvsp: ENST00000568666.1:c.1074A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*739A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1074A>G
  hgvsp: ENST00000565601.1:c.1074A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42641
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys358Lys
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

16-71894094-GCCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894094
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894091
    reference: chr 16
allele count: 1
allele frequency: 8.253140319891718e-6
allele num: 121166
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1063_1065delAGG
  hgvsp: ENSP00000398089.1:p.Arg355del
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1063_1065delAGG
  hgvsp: ENSP00000456563.1:p.Arg355del
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.937_939delAGG
  hgvsp: ENSP00000405908.2:p.Arg313del
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1063_1065delAGG
  hgvsp: ENSP00000455648.1:p.Arg355del
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*476_*478delAGG
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*893_*895delAGG
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*728_*730delAGG
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*893_*895delAGG
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.937_939delAGG
  hgvsp: ENSP00000313822.6:p.Arg313del
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12125_119+12127delCTC
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12125_-16+12127delCTC
  variant of: http://identifiers.org/hgnc/28977
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg355del
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: GCCT
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

16-71894097-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894097
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894097
    reference: chr 16
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.937A>C
  hgvsp: ENST00000446827.2:c.937A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.937A>C
  hgvsp: ENST00000313565.6:c.937A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1063A>C
  hgvsp: ENST00000565601.1:c.1063A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1063A>C
  hgvsp: ENST00000568666.1:c.1063A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*728A>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1063A>C
  hgvsp: ENST00000425432.1:c.1063A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12123T>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12123T>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*893A>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*893A>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*476A>C
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14099
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg355Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ

16-71894099-CTCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894099
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894096
    reference: chr 16
allele count: 1
allele frequency: 8.255320554097116e-6
allele num: 121134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1058_1060delAGA
  hgvsp: ENSP00000455648.1:p.Lys353del
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1058_1060delAGA
  hgvsp: ENSP00000456563.1:p.Lys353del
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12127_-16+12129delCTT
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.932_934delAGA
  hgvsp: ENSP00000405908.2:p.Lys311del
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.932_934delAGA
  hgvsp: ENSP00000313822.6:p.Lys311del
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*888_*890delAGA
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1058_1060delAGA
  hgvsp: ENSP00000398089.1:p.Lys353del
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*471_*473delAGA
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*723_*725delAGA
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*888_*890delAGA
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12127_119+12129delCTT
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys353del
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: CTCT
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

16-71894110-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894110
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894110
    reference: chr 16
allele count: 1
allele frequency: 8.259684480052863e-6
allele num: 121070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1050G>A
  hgvsp: ENST00000568666.1:c.1050G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1050G>A
  hgvsp: ENST00000565601.1:c.1050G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.924G>A
  hgvsp: ENST00000446827.2:c.924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1050G>A
  hgvsp: ENST00000425432.1:c.1050G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12136C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.924G>A
  hgvsp: ENST00000313565.6:c.924G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*463G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*880G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*880G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*715G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12136C>T
  variant of: http://identifiers.org/hgnc/28977
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys350Lys
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-71894121-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894121
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894121
    reference: chr 16
allele count: 1
allele frequency: 8.269930532583527e-6
allele num: 120920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*869C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*452C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12147G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12147G>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1039C>T
  hgvsp: ENSP00000455648.1:p.Arg347Ter
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*869C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1039C>T
  hgvsp: ENSP00000456563.1:p.Arg347Ter
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.913C>T
  hgvsp: ENSP00000313822.6:p.Arg305Ter
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.913C>T
  hgvsp: ENSP00000405908.2:p.Arg305Ter
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*704C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1039C>T
  hgvsp: ENSP00000398089.1:p.Arg347Ter
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg347Ter
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

16-71894122-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894122
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894122
    reference: chr 16
allele count: 1
allele frequency: 8.269246671628215e-6
allele num: 120930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12148C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*868G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*451G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.912G>A
  hgvsp: ENST00000446827.2:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1038G>A
  hgvsp: ENST00000568666.1:c.1038G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*703G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12148C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.912G>A
  hgvsp: ENST00000313565.6:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*868G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1038G>A
  hgvsp: ENST00000425432.1:c.1038G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1038G>A
  hgvsp: ENST00000565601.1:c.1038G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41860
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu346Glu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

16-71894131-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894131
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894131
    reference: chr 16
allele count: 1
allele frequency: 8.29737802854298e-6
allele num: 120520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*694C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.903C>T
  hgvsp: ENST00000313565.6:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12157G>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1029C>T
  hgvsp: ENST00000425432.1:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12157G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1029C>T
  hgvsp: ENST00000565601.1:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1029C>T
  hgvsp: ENST00000568666.1:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*859C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.903C>T
  hgvsp: ENST00000446827.2:c.903C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*859C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*442C>T
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu343Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

16-71894136-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894136
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894136
    reference: chr 16
allele count: 1
allele frequency: 8.325978718798394e-6
allele num: 120106
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.898C>T
  hgvsp: ENSP00000313822.6:p.Arg300Trp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.898C>T
  hgvsp: ENSP00000405908.2:p.Arg300Trp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1024C>T
  hgvsp: ENSP00000456563.1:p.Arg342Trp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*689C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1024C>T
  hgvsp: ENSP00000455648.1:p.Arg342Trp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1024C>T
  hgvsp: ENSP00000398089.1:p.Arg342Trp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*854C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12162G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*437C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*854C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12162G>A
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg342Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

16-71894145-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894145
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894145
    reference: chr 16
allele count: 1
allele frequency: 8.310203267571925e-6
allele num: 120334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*845C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1015C>T
  hgvsp: ENSP00000456563.1:p.Arg339Trp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*845C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12171G>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1015C>T
  hgvsp: ENSP00000455648.1:p.Arg339Trp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*428C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*680C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.889C>T
  hgvsp: ENSP00000313822.6:p.Arg297Trp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12171G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1015C>T
  hgvsp: ENSP00000398089.1:p.Arg339Trp
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.889C>T
  hgvsp: ENSP00000405908.2:p.Arg297Trp
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg339Trp
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-71894152-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894152
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894152
    reference: chr 16
allele count: 3
allele frequency: 2.493765586034913e-5
allele num: 120300
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.1008G>A
  hgvsp: ENST00000565601.1:c.1008G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*421G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.1008G>A
  hgvsp: ENST00000568666.1:c.1008G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*838G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.1008G>A
  hgvsp: ENST00000425432.1:c.1008G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.882G>A
  hgvsp: ENST00000446827.2:c.882G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12178C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*838G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12178C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.882G>A
  hgvsp: ENST00000313565.6:c.882G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*673G>A
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40446
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro336Pro
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-71894162-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894162
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894162
    reference: chr 16
allele count: 1
allele frequency: 8.320852055250457e-6
allele num: 120180
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*663A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.872A>G
  hgvsp: ENSP00000405908.2:p.Asn291Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*411A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.998A>G
  hgvsp: ENSP00000456563.1:p.Asn333Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.998A>G
  hgvsp: ENSP00000398089.1:p.Asn333Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.872A>G
  hgvsp: ENSP00000313822.6:p.Asn291Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12188T>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*828A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*828A>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12188T>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.998A>G
  hgvsp: ENSP00000455648.1:p.Asn333Ser
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn333Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/16-71894168-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894168
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894168
    reference: chr 16
allele count: 1
allele frequency: 8.326810664979099e-6
allele num: 120094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*822G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.866G>T
  hgvsp: ENSP00000405908.2:p.Arg289Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.992G>T
  hgvsp: ENSP00000456563.1:p.Arg331Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12194C>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.992G>T
  hgvsp: ENSP00000455648.1:p.Arg331Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12194C>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*657G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.866G>T
  hgvsp: ENSP00000313822.6:p.Arg289Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.992G>T
  hgvsp: ENSP00000398089.1:p.Arg331Leu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*405G>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*822G>T
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14208
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3040
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg331Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

16-71894170-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894170
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894170
    reference: chr 16
allele count: 1
allele frequency: 8.326810664979099e-6
allele num: 120094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.864G>A
  hgvsp: ENST00000313565.6:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.990G>A
  hgvsp: ENST00000568666.1:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.864G>A
  hgvsp: ENST00000446827.2:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*820G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.990G>A
  hgvsp: ENST00000565601.1:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.990G>A
  hgvsp: ENST00000425432.1:c.990G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*655G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*820G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12196C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12196C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*403G>A
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40076
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys330Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

16-71894175-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894175
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894175
    reference: chr 16
allele count: 1
allele frequency: 8.334444592612349e-6
allele num: 119984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.859C>T
  hgvsp: ENST00000446827.2:c.859C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*815C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12201G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.985C>T
  hgvsp: ENST00000425432.1:c.985C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12201G>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*398C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.859C>T
  hgvsp: ENST00000313565.6:c.859C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.985C>T
  hgvsp: ENST00000565601.1:c.985C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*650C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*815C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.985C>T
  hgvsp: ENST00000568666.1:c.985C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14212
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu329Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/16-71894188-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894188
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894189
    reference: chr 16
allele count: 1
allele frequency: 8.362322718758362e-6
allele num: 119584
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.845_846insT
  hgvsp: ENSP00000313822.6:p.Glu283GlyfsTer10
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.971_972insT
  hgvsp: ENSP00000398089.1:p.Glu325GlyfsTer10
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.845_846insT
  hgvsp: ENSP00000405908.2:p.Glu283GlyfsTer10
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*801_*802insT
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.971_972insT
  hgvsp: ENSP00000456563.1:p.Glu325GlyfsTer10
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.971_972insT
  hgvsp: ENSP00000455648.1:p.Glu325GlyfsTer10
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12214_-16+12215insA
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*384_*385insT
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12214_119+12215insA
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*801_*802insT
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*636_*637insT
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu325GlyfsTer10
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

16-71894189-C-CTTCATTTGCTAGAATGACATTGAGAGAAAAGCAAGAAAGGGGCAGTAAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894189
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894238
    reference: chr 16
allele count: 1
allele frequency: 8.365680631776201e-6
allele num: 119536
alternate allele: CTTCATTTGCTAGAATGACATTGAGAGAAAAGCAAGAAAGGGGCAGTAAA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsp: ENSP00000405908.2:p.Arg282LeufsTer14
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsp: ENSP00000313822.6:p.Arg282LeufsTer14
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsp: ENSP00000398089.1:p.Arg324LeufsTer14
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsp: ENSP00000456563.1:p.Arg324LeufsTer14
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsp: ENSP00000455648.1:p.Arg324LeufsTer14
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: stop gained
filter: VQSRTrancheINDEL99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39511
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg324LeufsTer14
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

16-71894208-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894208
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894208
    reference: chr 16
allele count: 2
allele frequency: 1.678274733573886e-5
allele num: 119170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.952C>T
  hgvsp: ENSP00000456563.1:p.Arg318Cys
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*617C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.826C>T
  hgvsp: ENSP00000313822.6:p.Arg276Cys
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.952C>T
  hgvsp: ENSP00000455648.1:p.Arg318Cys
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12234G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.826C>T
  hgvsp: ENSP00000405908.2:p.Arg276Cys
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456087
  ensembl transcript: ENST00000563827
  gene symbol: ZNF821
  hgvsc: ENST00000563827.1:c.*457C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.952C>T
  hgvsp: ENSP00000398089.1:p.Arg318Cys
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*782C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*782C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12234G>A
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*365C>T
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg318Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

16-71894213-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894213
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894213
    reference: chr 16
allele count: 1
allele frequency: 8.391937026904549e-6
allele num: 119162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.947G>A
  hgvsp: ENSP00000455648.1:p.Arg316Gln
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*777G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456087
  ensembl transcript: ENST00000563827
  gene symbol: ZNF821
  hgvsc: ENST00000563827.1:c.*452G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.821G>A
  hgvsp: ENSP00000313822.6:p.Arg274Gln
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.947G>A
  hgvsp: ENSP00000456563.1:p.Arg316Gln
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12239C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*360G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.821G>A
  hgvsp: ENSP00000405908.2:p.Arg274Gln
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*777G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.947G>A
  hgvsp: ENSP00000398089.1:p.Arg316Gln
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12239C>T
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*612G>A
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14642
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg316Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

16-71894220-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894220
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894220
    reference: chr 16
allele count: 1
allele frequency: 8.388558006878617e-6
allele num: 119210
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12246C>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12246C>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*770G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.940G>C
  hgvsp: ENSP00000455648.1:p.Glu314Gln
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*605G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.940G>C
  hgvsp: ENSP00000456563.1:p.Glu314Gln
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456087
  ensembl transcript: ENST00000563827
  gene symbol: ZNF821
  hgvsc: ENST00000563827.1:c.*445G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.814G>C
  hgvsp: ENSP00000313822.6:p.Glu272Gln
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*770G>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.814G>C
  hgvsp: ENSP00000405908.2:p.Glu272Gln
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.940G>C
  hgvsp: ENSP00000398089.1:p.Glu314Gln
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*353G>C
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu314Gln
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

16-71894221-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894221
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894221
    reference: chr 16
allele count: 4
allele frequency: 3.354579000335458e-5
allele num: 119240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12247G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*769C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*769C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*352C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.939C>T
  hgvsp: ENST00000568666.1:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*604C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.813C>T
  hgvsp: ENST00000446827.2:c.813C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.939C>T
  hgvsp: ENST00000425432.1:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456087
  ensembl transcript: ENST00000563827
  gene symbol: ZNF821
  hgvsc: ENST00000563827.1:c.*444C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.813C>T
  hgvsp: ENST00000313565.6:c.813C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.939C>T
  hgvsp: ENST00000565601.1:c.939C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12247G>A
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp313Asp
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

16-71894221-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894221
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894221
    reference: chr 16
allele count: 1
allele frequency: 8.386447500838645e-6
allele num: 119240
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.939C>G
  hgvsp: ENSP00000398089.1:p.Asp313Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12247G>C
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.813C>G
  hgvsp: ENSP00000405908.2:p.Asp271Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*352C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*769C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12247G>C
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456087
  ensembl transcript: ENST00000563827
  gene symbol: ZNF821
  hgvsc: ENST00000563827.1:c.*444C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.939C>G
  hgvsp: ENSP00000455648.1:p.Asp313Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*769C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.939C>G
  hgvsp: ENSP00000456563.1:p.Asp313Glu
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*604C>G
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.813C>G
  hgvsp: ENSP00000313822.6:p.Asp271Glu
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp313Glu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

16-71894238-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894238
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894238
    reference: chr 16
allele count: 1
allele frequency: 8.377033524888167e-6
allele num: 119374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.922C>T
  hgvsp: ENSP00000455648.1:p.Arg308Cys
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.796C>T
  hgvsp: ENSP00000313822.6:p.Arg266Cys
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.922C>T
  hgvsp: ENSP00000456563.1:p.Arg308Cys
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456087
  ensembl transcript: ENST00000563827
  gene symbol: ZNF821
  hgvsc: ENST00000563827.1:c.*427C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*587C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.922C>T
  hgvsp: ENSP00000398089.1:p.Arg308Cys
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12264G>A
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*335C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.796C>T
  hgvsp: ENSP00000405908.2:p.Arg266Cys
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*752C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*752C>T
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12264G>A
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39465
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg308Cys
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

16-71894239-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894239
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894239
    reference: chr 16
allele count: 21
allele frequency: 1.758411066266977e-4
allele num: 119426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*586G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456087
  ensembl transcript: ENST00000563827
  gene symbol: ZNF821
  hgvsc: ENST00000563827.1:c.*426G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*334G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12265C>T
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*751G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*751G>A
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.921G>A
  hgvsp: ENST00000425432.1:c.921G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.795G>A
  hgvsp: ENST00000313565.6:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.795G>A
  hgvsp: ENST00000446827.2:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.921G>A
  hgvsp: ENST00000568666.1:c.921G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.921G>A
  hgvsp: ENST00000565601.1:c.921G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12265C>T
  variant of: http://identifiers.org/hgnc/33279
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39474
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln307Gln
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-71894243-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71894243
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 71894243
    reference: chr 16
allele count: 1
allele frequency: 8.367500627562547e-6
allele num: 119510
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000405908
  ensembl transcript: ENST00000446827
  gene symbol: ZNF821
  hgvsc: ENST00000446827.2:c.791T>C
  hgvsp: ENSP00000405908.2:p.Leu264Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457985
  ensembl transcript: ENST00000566987
  gene symbol: ZNF821
  hgvsc: ENST00000566987.1:c.*747T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000398089
  ensembl transcript: ENST00000425432
  gene symbol: ZNF821
  hgvsc: ENST00000425432.1:c.917T>C
  hgvsp: ENSP00000398089.1:p.Leu306Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000182149
  ensembl protein: ENSP00000456200
  ensembl transcript: ENST00000568581
  gene symbol: IST1
  hgvsc: ENST00000568581.1:c.-16+12269A>G
  variant of: http://identifiers.org/hgnc/28977
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456087
  ensembl transcript: ENST00000563827
  gene symbol: ZNF821
  hgvsc: ENST00000563827.1:c.*422T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455648
  ensembl transcript: ENST00000565601
  gene symbol: ZNF821
  hgvsc: ENST00000565601.1:c.917T>C
  hgvsp: ENSP00000455648.1:p.Leu306Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000313822
  ensembl transcript: ENST00000313565
  gene symbol: ZNF821
  hgvsc: ENST00000313565.6:c.791T>C
  hgvsp: ENSP00000313822.6:p.Leu264Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000456563
  ensembl transcript: ENST00000568666
  gene symbol: ZNF821
  hgvsc: ENST00000568666.1:c.917T>C
  hgvsp: ENSP00000456563.1:p.Leu306Ser
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455454
  ensembl transcript: ENST00000562808
  gene symbol: ZNF821
  hgvsc: ENST00000562808.1:c.*747T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000224470
  ensembl transcript: ENST00000569119
  gene symbol: ATXN1L
  hgvsc: ENST00000569119.1:n.119+12269A>G
  variant of: http://identifiers.org/hgnc/33279
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000457396
  ensembl transcript: ENST00000568961
  gene symbol: ZNF821
  hgvsc: ENST00000568961.1:c.*582T>C
  variant of: http://identifiers.org/hgnc/28043
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000102984
  ensembl protein: ENSP00000455738
  ensembl transcript: ENST00000564134
  gene symbol: ZNF821
  hgvsc: ENST00000564134.1:c.*330T>C
  variant of: http://identifiers.org/hgnc/28043
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu306Ser
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A

GenotypeQuality
all individuals: 111
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.831501831501832e-3
allele num: 546
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e0

VQSLOD
type: SiteQuality
SIO_000300: -3.836e-1

FS
type: SiteQuality
SIO_000300: 2.303e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

QD
type: SiteQuality
SIO_000300: 1.469e1

DP
type: SiteQuality
SIO_000300: 1.69069e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.725e0

MQRankSum
type: SiteQuality
SIO_000300: 7.06e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

GenotypeQuality
all individuals: 4360
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 96
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.758087201125176e-4
allele num: 5688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2588
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.22e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

DP
type: SiteQuality
SIO_000300: 1.54088e5

FS
type: SiteQuality
SIO_000300: 2.081e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.105e-1

QD
type: SiteQuality
SIO_000300: 1.086e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.68e-1

GenotypeQuality
all individuals: 4268
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.623188405797101e-4
allele num: 5520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2064
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1712
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 1.48711e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e-2

FS
type: SiteQuality
SIO_000300: 1.133e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 9.94e0

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.52e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.61e-1

GenotypeQuality
all individuals: 66
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 6.075334143377885e-4
allele num: 1646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.355704697986577e-3
allele num: 298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.018570851836899e-4
allele num: 4954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

QD
type: SiteQuality
SIO_000300: 1.336e1

FS
type: SiteQuality
SIO_000300: 5.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.824e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e0

VQSLOD
type: SiteQuality
SIO_000300: -1.037e0

DP
type: SiteQuality
SIO_000300: 1.2378e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 330
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.112378538234052e-4
allele num: 4734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.25e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.472e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.21e-1

DP
type: SiteQuality
SIO_000300: 1.11141e5

GenotypeQuality
all individuals: 50
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.307337332718043e-4
allele num: 4334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.819e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.98e0

DP
type: SiteQuality
SIO_000300: 9.8435e4

MQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e0

GenotypeQuality
all individuals: 270
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4338
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.369668246445498e-3
allele num: 422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQ
type: SiteQuality
SIO_000300: 5.915e1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.07e-1

FS
type: SiteQuality
SIO_000300: 2.851e0

VQSLOD
type: SiteQuality
SIO_000300: -1.427e0

QD
type: SiteQuality
SIO_000300: 1.067e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.68e-2

DP
type: SiteQuality
SIO_000300: 9.8021e4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.487e0

GenotypeQuality
all individuals: 52
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4310
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 5.076142131979695e-3
allele num: 394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

FS
type: SiteQuality
SIO_000300: 6.682e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.73e-2

QD
type: SiteQuality
SIO_000300: 1.239e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.01e-2

DP
type: SiteQuality
SIO_000300: 9.7145e4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.168e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.551020408163265e-3
allele num: 392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1454
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.958e1

MQRankSum
type: SiteQuality
SIO_000300: -1.071e0

DP
type: SiteQuality
SIO_000300: 9.4194e4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

VQSLOD
type: SiteQuality
SIO_000300: -2.924e0

FS
type: SiteQuality
SIO_000300: 5.125e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.66e-2

QD
type: SiteQuality
SIO_000300: 6.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.547e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 1332
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.71591526344378e-4
allele num: 3682
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.668e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.28e-2

FS
type: SiteQuality
SIO_000300: 3.522e0

QD
type: SiteQuality
SIO_000300: 7.14e0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.453e0

DP
type: SiteQuality
SIO_000300: 8.8029e4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.951e0

MQ
type: SiteQuality
SIO_000300: 5.281e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 34
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.223726627981947e-4
allele num: 3102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.11e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 8.5563e4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: -1.519e0

QD
type: SiteQuality
SIO_000300: 3.374e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.98215992354253e-5
allele num: 25112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2954
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1596
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.97e-1

QD
type: SiteQuality
SIO_000300: 1.4e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.16e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.931e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.228e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 5.39014e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 7.917029530520149e-5
allele num: 25262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2992
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2630
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.12e-2

DP
type: SiteQuality
SIO_000300: 5.42395e5

FS
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.15e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

GenotypeQuality
all individuals: 2526
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2882
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 4600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.602045962106476e-5
allele num: 27762
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.94e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.898e0

QD
type: SiteQuality
SIO_000300: 1.9e1

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33654
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4484
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2622
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5462
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.09e0

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.1e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 35142
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 2.346316283435007e-4
allele num: 4262
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2740
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South Asian
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allele count: 0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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QD
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.657736671450593e-5
allele num: 37626
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
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Other
type: Population
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South Asian
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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FS
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QD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 188
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5028
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.931993817619784e-4
allele num: 5176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

DP
type: SiteQuality
SIO_000300: 8.70731e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.55e-1

FS
type: SiteQuality
SIO_000300: 5.986e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.806e1

VQSLOD
type: SiteQuality
SIO_000300: -2.669e-1

GenotypeQuality
all individuals: 932
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 3.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
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variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.976440825361689e-5
allele num: 50596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

DP
type: SiteQuality
SIO_000300: 1.030199e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.232e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

QD
type: SiteQuality
SIO_000300: 1.245e1

GenotypeQuality
all individuals: 176
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 556
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 78
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GenotypeQuality
all individuals: 36448
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56136
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.181195369714151e-4
allele num: 8466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.895e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.85e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-1

QD
type: SiteQuality
SIO_000300: 1.789e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.402e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 1.141908e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.85e-1

FS
type: SiteQuality
SIO_000300: 2.205e0

GenotypeQuality
all individuals: 241
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41955
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 492
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.035830618892508e-4
allele num: 9824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60020
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.07e0

MQ
type: SiteQuality
SIO_000300: 5.739e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.720000000000001e0

DP
type: SiteQuality
SIO_000300: 1.225795e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.313e0

MQRankSum
type: SiteQuality
SIO_000300: 6.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.37e-1

GenotypeQuality
all individuals: 306
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
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variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 281
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variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 94
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GenotypeQuality
all individuals: 3280
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variant carriers: 0

GenotypeQuality
all individuals: 163
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GenotypeQuality
all individuals: 542
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GenotypeQuality
all individuals: 258
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variant carriers: 0

GenotypeQuality
all individuals: 324
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variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 6993
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44743
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.055966209081309e-4
allele num: 9470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.071e0

QD
type: SiteQuality
SIO_000300: 1.231e1

DP
type: SiteQuality
SIO_000300: 1.258921e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 3.524e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

GenotypeQuality
all individuals: 560
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 821
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variant carriers: 0

GenotypeQuality
all individuals: 50
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61754
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.160864785635764e-5
allele num: 10916
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5960
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.481e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.94e-1

DP
type: SiteQuality
SIO_000300: 1.266383e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.21e-1

GenotypeDepth
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 466
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GenotypeQuality
all individuals: 774
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variant carriers: 0

GenotypeQuality
all individuals: 315
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GenotypeQuality
all individuals: 96
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 336
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GenotypeQuality
all individuals: 328
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variant carriers: 0

GenotypeQuality
all individuals: 3621
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3632
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171234481143125e-4
allele num: 8538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11164
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13042
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.022e0

QD
type: SiteQuality
SIO_000300: 1.282e1

DP
type: SiteQuality
SIO_000300: 1.334659e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.474e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.63e-1

GenotypeDepth
all individuals: 348
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
all individuals: 256
bin: 4.75e1
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GenotypeQuality
all individuals: 333
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 282
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GenotypeQuality
all individuals: 727
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GenotypeQuality
all individuals: 101
bin: 8.75e1
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GenotypeQuality
all individuals: 82
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169317118802619e-4
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64694
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.399999999999999e-3

FS
type: SiteQuality
SIO_000300: 4.168e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.347477e6

QD
type: SiteQuality
SIO_000300: 1.768e1

GenotypeDepth
all individuals: 60
bin: 6.75e1
variant carriers: 56

GenotypeQuality
all individuals: 68
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 684
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variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.25e1
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GenotypeQuality
all individuals: 119
bin: 3.75e1
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GenotypeQuality
all individuals: 3890
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variant carriers: 0

GenotypeQuality
all individuals: 51846
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 2.5e0
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GenotypeQuality
all individuals: 101
bin: 4.25e1
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GenotypeQuality
all individuals: 123
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GenotypeQuality
all individuals: 780
bin: 2.25e1
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GenotypeQuality
all individuals: 1294
bin: 9.75e1
variant carriers: 1130

GenotypeQuality
all individuals: 814
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 40
allele frequency: 6.110601894286587e-3
allele num: 6546
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 6.756756756756757e-3
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 25
allele frequency: 2.410800385728062e-3
allele num: 10370
num of homozygotes: 0

South Asian
type: Population
allele count: 69
allele frequency: 4.350018913125709e-3
allele num: 15862
num of homozygotes: 1

Latino
type: Population
allele count: 84
allele frequency: 7.309432648799165e-3
allele num: 11492
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 922
allele frequency: 1.392370654504817e-2
allele num: 66218
num of homozygotes: 11

DP
type: SiteQuality
SIO_000300: 1.434103e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 1.338e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

GenotypeDepth
all individuals: 3
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 75
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GenotypeQuality
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GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 107
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 52903
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GenotypeQuality
all individuals: 871
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variant carriers: 0

GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 4064
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.637625289128758e-5
allele num: 10376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15950
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.119e1

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.805e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.189e0

DP
type: SiteQuality
SIO_000300: 1.410533e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.645e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.263e0

GenotypeDepth
all individuals: 9
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 863
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 53080
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variant carriers: 0

GenotypeQuality
all individuals: 104
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 116
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variant carriers: 0

GenotypeQuality
all individuals: 184
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GenotypeQuality
all individuals: 75
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GenotypeQuality
all individuals: 4084
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16110
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.448e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.194e0

DP
type: SiteQuality
SIO_000300: 1.416003e6

QD
type: SiteQuality
SIO_000300: 1.609e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-2

GenotypeDepth
all individuals: 2767
bin: 3.25e1
variant carriers: 5

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4101
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 98
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GenotypeQuality
all individuals: 862
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variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 9.75e1
variant carriers: 38

GenotypeQuality
all individuals: 337
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variant carriers: 0

GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 29
allele frequency: 1.789460693570283e-3
allele num: 16206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.355217587712694e-4
allele num: 66410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.351e1

FS
type: SiteQuality
SIO_000300: 7.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-1

DP
type: SiteQuality
SIO_000300: 1.41858e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.74e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.001e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

GenotypeDepth
all individuals: 3
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 862
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variant carriers: 0

GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 53248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4101
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505797319680771e-5
allele num: 66410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-1

DP
type: SiteQuality
SIO_000300: 1.41858e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.74e-2

QD
type: SiteQuality
SIO_000300: 1.351e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.07e-1

FS
type: SiteQuality
SIO_000300: 7.49e-1

GenotypeDepth
all individuals: 405
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
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GenotypeQuality
all individuals: 183
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variant carriers: 1

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 0

GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 79
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 53468
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 854
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 328
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GenotypeQuality
all individuals: 110
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GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 4099
bin: 6.75e1
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GenotypeQuality
all individuals: 98
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.420813e6

VQSLOD
type: SiteQuality
SIO_000300: -2.556e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 1.65e1

MQRankSum
type: SiteQuality
SIO_000300: 6.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.353e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

GenotypeDepth
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 4090
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variant carriers: 0

GenotypeQuality
all individuals: 324
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GenotypeQuality
all individuals: 143
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GenotypeQuality
all individuals: 182
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GenotypeQuality
all individuals: 93
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GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 83
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GenotypeQuality
all individuals: 696
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 80
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GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 257
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GenotypeQuality
all individuals: 96
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GenotypeQuality
all individuals: 141
bin: 4.75e1
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GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 849
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 53471
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.187e0

MQ
type: SiteQuality
SIO_000300: 5.702e1

DP
type: SiteQuality
SIO_000300: 1.424797e6

VQSLOD
type: SiteQuality
SIO_000300: -1.267e0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e0

QD
type: SiteQuality
SIO_000300: 1.35e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

GenotypeDepth
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
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variant carriers: 0

GenotypeQuality
all individuals: 693
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GenotypeQuality
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GenotypeQuality
all individuals: 89
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GenotypeQuality
all individuals: 87
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GenotypeQuality
all individuals: 326
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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DP
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FS
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MQ
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MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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QD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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African
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Latino
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Other
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European (Non-Finnish)
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East Asian
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MQ
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ReadPosRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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DP
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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Other
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European (Finnish)
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Latino
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African
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South Asian
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MQRankSum
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BaseQRankSum
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FS
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QD
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ClippingRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

Other
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African
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
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MQRankSum
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DP
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VQSLOD
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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South Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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African
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ClippingRankSum
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MQRankSum
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MQ
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DP
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BaseQRankSum
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VQSLOD
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FS
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QD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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European (Non-Finnish)
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Other
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Latino
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European (Finnish)
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East Asian
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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DP
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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South Asian
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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FS
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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DP
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.0e-4

QD
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DP
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BaseQRankSum
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SIO_000300: -1.04e0

VQSLOD
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SIO_000300: 1.4e-1

ClippingRankSum
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SIO_000300: 4.0e-2

ReadPosRankSum
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SIO_000300: -5.1e-2

FS
type: SiteQuality
SIO_000300: 2.521e0

MQRankSum
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SIO_000300: -1.286e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
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allele num: 16512
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ClippingRankSum
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SIO_000300: -1.297e0

ReadPosRankSum
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SIO_000300: 1.05e0

MQ
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BaseQRankSum
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VQSLOD
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FS
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SIO_000300: 2.329e0

MQRankSum
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DP
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SIO_000300: 1.428763e6

QD
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SIO_000300: 1.01e1

InbreedingCoeff
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SIO_000300: -1.0e-4

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 28

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 28
allele frequency: 3.242241778601204e-3
allele num: 8636
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.431275e6

MQ
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SIO_000300: 5.945e1

ClippingRankSum
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SIO_000300: -2.11e-1

VQSLOD
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FS
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MQRankSum
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SIO_000300: 1.2e-2

InbreedingCoeff
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SIO_000300: -3.0e-4

BaseQRankSum
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SIO_000300: -1.818e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.74e-1

QD
type: SiteQuality
SIO_000300: 1.054e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

ClippingRankSum
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SIO_000300: 1.08e0

MQ
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SIO_000300: 6.0e1

MQRankSum
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InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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SIO_000300: 4.5e-2

DP
type: SiteQuality
SIO_000300: 1.428834e6

VQSLOD
type: SiteQuality
SIO_000300: 2.88e-1

BaseQRankSum
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SIO_000300: -1.117e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 681
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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num of homozygotes: 0

South Asian
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InbreedingCoeff
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MQRankSum
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FS
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MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502042778178322e-5
allele num: 66576
num of homozygotes: 0

European (Finnish)
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allele frequency: 6.047777441790142e-4
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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Other
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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MQRankSum
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DP
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FS
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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num of homozygotes: 0

African
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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ReadPosRankSum
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FS
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MQRankSum
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QD
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BaseQRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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South Asian
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East Asian
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Latino
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Other
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European (Non-Finnish)
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allele frequency: 1.502855425308085e-5
allele num: 66540
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DP
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VQSLOD
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MQRankSum
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ReadPosRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
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QD
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MQ
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SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.503036132988637e-5
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African
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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FS
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BaseQRankSum
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QD
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MQRankSum
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DP
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ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
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SIO_000300: -6.68e-1

InbreedingCoeff
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SIO_000300: 1.3e-3

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66490
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DP
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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QD
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MQRankSum
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MQ
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FS
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ReadPosRankSum
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SIO_000300: 7.59e-1

BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.506341698550899e-5
allele num: 66386
num of homozygotes: 0

South Asian
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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VQSLOD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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MQ
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DP
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8630
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European (Non-Finnish)
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Latino
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allele num: 11570
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Other
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ClippingRankSum
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FS
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DP
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MQ
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66140
num of homozygotes: 0

South Asian
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African
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European (Finnish)
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Other
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East Asian
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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QD
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MQRankSum
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FS
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.518556763651825e-5
allele num: 65852
num of homozygotes: 0

Other
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South Asian
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Latino
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European (Finnish)
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African
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East Asian
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQ
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ClippingRankSum
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QD
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MQRankSum
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FS
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DP
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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African
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Other
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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DP
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QD
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VQSLOD
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ClippingRankSum
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MQ
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FS
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -3.296e0

GenotypeDepth
all individuals: 3084
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3943
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52217
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.979022362952701e-4
allele num: 10106
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515197430225158e-5
allele num: 65998
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.417363e6

VQSLOD
type: SiteQuality
SIO_000300: -3.416e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.19e-1

FS
type: SiteQuality
SIO_000300: 1.824e0

MQ
type: SiteQuality
SIO_000300: 5.844e1

QD
type: SiteQuality
SIO_000300: 1.263e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

GenotypeDepth
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 322
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variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 94
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3910
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 674
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516990291262136e-5
allele num: 65920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.86e0

DP
type: SiteQuality
SIO_000300: 1.412891e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e0

QD
type: SiteQuality
SIO_000300: 1.704e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -8.54e-2

GenotypeDepth
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 139
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variant carriers: 1

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 316
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variant carriers: 0

GenotypeQuality
all individuals: 221
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variant carriers: 0

GenotypeQuality
all individuals: 3867
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variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
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variant carriers: 0

GenotypeQuality
all individuals: 1370
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variant carriers: 0

GenotypeQuality
all individuals: 163
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variant carriers: 0

GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 325
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variant carriers: 0

GenotypeQuality
all individuals: 832
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variant carriers: 0

GenotypeQuality
all individuals: 247
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variant carriers: 0

GenotypeQuality
all individuals: 664
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variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51604
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51851064475962e-5
allele num: 65854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.744e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.942e1

QD
type: SiteQuality
SIO_000300: 2.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.26e-1

DP
type: SiteQuality
SIO_000300: 1.411485e6

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

FS
type: SiteQuality
SIO_000300: 1.3646e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

GenotypeDepth
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
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variant carriers: 0

GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
all individuals: 51632
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variant carriers: 0

GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 659
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variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
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variant carriers: 1

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 129
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variant carriers: 0

GenotypeQuality
all individuals: 3859
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variant carriers: 0

GenotypeQuality
all individuals: 827
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variant carriers: 0

GenotypeQuality
all individuals: 315
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variant carriers: 0

GenotypeQuality
all individuals: 99
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variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65858
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 1.410868e6

MQRankSum
type: SiteQuality
SIO_000300: 5.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.22e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.516e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.5e-2

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 219
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variant carriers: 1

GenotypeQuality
all individuals: 241
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variant carriers: 0

GenotypeQuality
all individuals: 158
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variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 406
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variant carriers: 0

GenotypeQuality
all individuals: 186
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variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 310
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variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 809
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variant carriers: 0

GenotypeQuality
all individuals: 227
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GenotypeQuality
all individuals: 1454
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3813
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variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
all individuals: 51119
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variant carriers: 0

GenotypeQuality
all individuals: 360
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variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519987840097279e-5
allele num: 65790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

QD
type: SiteQuality
SIO_000300: 1.161e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.679999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

FS
type: SiteQuality
SIO_000300: 2.402e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 1.407831e6

VQSLOD
type: SiteQuality
SIO_000300: 9.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.26e0

MQRankSum
type: SiteQuality
SIO_000300: 6.41e-1

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 265
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variant carriers: 0

GenotypeQuality
all individuals: 235
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 218
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GenotypeQuality
all individuals: 405
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variant carriers: 0

GenotypeQuality
all individuals: 14
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GenotypeQuality
all individuals: 130
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 261
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GenotypeQuality
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GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 50851
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variant carriers: 0

GenotypeQuality
all individuals: 483
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variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.007861318282604e-4
allele num: 9922
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65566
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.402891e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.658e1

VQSLOD
type: SiteQuality
SIO_000300: -1.926e1

FS
type: SiteQuality
SIO_000300: 1.25424e2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.448e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

QD
type: SiteQuality
SIO_000300: 1.856e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 15
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 207
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GenotypeQuality
all individuals: 762
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.008064516129032e-4
allele num: 9920
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

DP
type: SiteQuality
SIO_000300: 1.403394e6

MQ
type: SiteQuality
SIO_000300: 4.671e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.297e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.38e0

VQSLOD
type: SiteQuality
SIO_000300: -2.233e1

FS
type: SiteQuality
SIO_000300: 1.26149e2

MQRankSum
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SIO_000300: -8.916e0

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.65e-1

GenotypeDepth
all individuals: 2
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variant carriers: 0

GenotypeDepth
all individuals: 1
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 763
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 2.34246896228625e-4
allele num: 8538
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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num of homozygotes: 0

Other
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num of homozygotes: 0

FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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MQ
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InbreedingCoeff
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ReadPosRankSum
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 65336
num of homozygotes: 0

Latino
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East Asian
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allele frequency: 0.0e0
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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QD
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BaseQRankSum
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MQ
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

East Asian
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allele num: 8532
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South Asian
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Latino
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African
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Other
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European (Non-Finnish)
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MQRankSum
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VQSLOD
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FS
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QD
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ReadPosRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
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allele frequency: 1.121076233183856e-3
allele num: 892
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele count: 2
allele frequency: 2.343566908835247e-4
allele num: 8534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65386
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.69414014953921e-5
allele num: 11502
num of homozygotes: 0

VQSLOD
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QD
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MQ
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SIO_000300: 6.0e1

ClippingRankSum
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ReadPosRankSum
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MQRankSum
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DP
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FS
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InbreedingCoeff
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SIO_000300: 2.0e-3

BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 65386
num of homozygotes: 0

Other
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African
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South Asian
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MQ
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FS
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QD
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 16464
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Latino
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Other
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allele frequency: 0.0e0
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European (Finnish)
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MQ
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DP
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BaseQRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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FS
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 21

Latino
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allele frequency: 1.738525730180807e-4
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.594706798131811e-4
allele num: 65518
num of homozygotes: 0

African
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allele frequency: 2.011667672500503e-4
allele num: 9942
num of homozygotes: 0

European (Finnish)
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Other
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South Asian
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East Asian
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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MQRankSum
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ClippingRankSum
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MQ
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3733
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52405
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9964
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.691117677733357e-5
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0