15-70347582-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347582
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347582
    reference: chr 15
allele count: 1
allele frequency: 8.527330092947898e-6
allele num: 117270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1384C>A
  hgvsp: ENSP00000394717.2:p.His462Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1393C>A
  hgvsp: ENSP00000452871.1:p.His465Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1363C>A
  hgvsp: ENSP00000415057.3:p.His455Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1357C>A
  hgvsp: ENSP00000319233.8:p.His453Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1369C>A
  hgvsp: ENSP00000390007.2:p.His457Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.136C>A
  hgvsp: ENSP00000454029.1:p.His46Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.*29C>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1605C>A
  hgvsp: ENSP00000453219.1:p.His536Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1369C>A
  hgvsp: ENSP00000453083.1:p.His457Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1378C>A
  hgvsp: ENSP00000453435.1:p.His460Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1174C>A
  hgvsp: ENSP00000442594.1:p.His392Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1423C>A
  hgvsp: ENSP00000453081.1:p.His475Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1393C>A
  hgvsp: ENSP00000453760.1:p.His465Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000542329
  gene symbol: TLE3
  hgvsc: ENST00000542329.2:n.21C>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1411C>A
  hgvsp: ENSP00000452881.1:p.His471Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2449C>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.*29C>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1225C>A
  hgvsp: ENSP00000454141.1:p.His409Asn
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1399C>A
  hgvsp: ENSP00000452933.1:p.His467Asn
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.His465Asn
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

15-70347583-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347583
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347583
    reference: chr 15
allele count: 1
allele frequency: 8.535481998668465e-6
allele num: 117158
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1392C>T
  hgvsp: ENST00000558939.1:c.1392C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.135C>T
  hgvsp: ENST00000559191.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1398C>T
  hgvsp: ENST00000560939.1:c.1398C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1224C>T
  hgvsp: ENST00000560589.1:c.1224C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.*28C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1368C>T
  hgvsp: ENST00000557997.1:c.1368C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1422C>T
  hgvsp: ENST00000559929.1:c.1422C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1368C>T
  hgvsp: ENST00000442299.2:c.1368C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1383C>T
  hgvsp: ENST00000451782.2:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1362C>T
  hgvsp: ENST00000440567.3:c.1362C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2448C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1392C>T
  hgvsp: ENST00000559048.1:c.1392C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1410C>T
  hgvsp: ENST00000558201.1:c.1410C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1604C>T
  hgvsp: ENST00000560525.1:c.1604C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000542329
  gene symbol: TLE3
  hgvsc: ENST00000542329.2:n.20C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1368C>T
  hgvsp: ENST00000557907.1:c.1368C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.*28C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1356C>T
  hgvsp: ENST00000317509.8:c.1356C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1173C>T
  hgvsp: ENST00000539550.1:c.1173C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro464Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

15-70347583-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347583
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347583
    reference: chr 15
allele count: 19
allele frequency: 1.621741579747008e-4
allele num: 117158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1368C>G
  hgvsp: ENST00000557907.1:c.1368C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1356C>G
  hgvsp: ENST00000317509.8:c.1356C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1604C>G
  hgvsp: ENST00000560525.1:c.1604C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1410C>G
  hgvsp: ENST00000558201.1:c.1410C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.135C>G
  hgvsp: ENST00000559191.1:c.135C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.*28C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1173C>G
  hgvsp: ENST00000539550.1:c.1173C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1422C>G
  hgvsp: ENST00000559929.1:c.1422C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1224C>G
  hgvsp: ENST00000560589.1:c.1224C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1383C>G
  hgvsp: ENST00000451782.2:c.1383C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1368C>G
  hgvsp: ENST00000442299.2:c.1368C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1362C>G
  hgvsp: ENST00000440567.3:c.1362C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1392C>G
  hgvsp: ENST00000559048.1:c.1392C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1377C>G
  hgvsp: ENST00000558379.1:c.1377C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1398C>G
  hgvsp: ENST00000560939.1:c.1398C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.*28C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1392C>G
  hgvsp: ENST00000558939.1:c.1392C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000542329
  gene symbol: TLE3
  hgvsc: ENST00000542329.2:n.20C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2448C>G
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro464Pro
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

15-70347586-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347586
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347586
    reference: chr 15
allele count: 1
allele frequency: 8.585459665510492e-6
allele num: 116476
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1407C>A
  hgvsp: ENSP00000452881.1:p.Phe469Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1419C>A
  hgvsp: ENSP00000453081.1:p.Phe473Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2445C>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1359C>A
  hgvsp: ENSP00000415057.3:p.Phe453Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1389C>A
  hgvsp: ENSP00000453760.1:p.Phe463Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1365C>A
  hgvsp: ENSP00000390007.2:p.Phe455Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1395C>A
  hgvsp: ENSP00000452933.1:p.Phe465Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.*25C>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1353C>A
  hgvsp: ENSP00000319233.8:p.Phe451Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1170C>A
  hgvsp: ENSP00000442594.1:p.Phe390Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1601C>A
  hgvsp: ENSP00000453219.1:p.Phe534Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1389C>A
  hgvsp: ENSP00000452871.1:p.Phe463Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.132C>A
  hgvsp: ENSP00000454029.1:p.Phe44Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1365C>A
  hgvsp: ENSP00000453083.1:p.Phe455Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.*25C>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000542329
  gene symbol: TLE3
  hgvsc: ENST00000542329.2:n.17C>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1365C>A
  hgvsp: ENSP00000453107.1:p.Phe455Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1374C>A
  hgvsp: ENSP00000453435.1:p.Phe458Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1221C>A
  hgvsp: ENSP00000454141.1:p.Phe407Leu
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Phe463Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

15-70347589-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347589
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347589
    reference: chr 15
allele count: 1
allele frequency: 8.601114704465699e-6
allele num: 116264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1362C>G
  hgvsp: ENST00000442299.2:c.1362C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1392C>G
  hgvsp: ENST00000560939.1:c.1392C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.129C>G
  hgvsp: ENST00000559191.1:c.129C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1362C>G
  hgvsp: ENST00000557907.1:c.1362C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1356C>G
  hgvsp: ENST00000440567.3:c.1356C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1350C>G
  hgvsp: ENST00000317509.8:c.1350C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1598C>G
  hgvsp: ENST00000560525.1:c.1598C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1218C>G
  hgvsp: ENST00000560589.1:c.1218C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1386C>G
  hgvsp: ENST00000559048.1:c.1386C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1167C>G
  hgvsp: ENST00000539550.1:c.1167C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1362C>G
  hgvsp: ENST00000557997.1:c.1362C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1416C>G
  hgvsp: ENST00000559929.1:c.1416C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1386C>G
  hgvsp: ENST00000558939.1:c.1386C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2442C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000542329
  gene symbol: TLE3
  hgvsc: ENST00000542329.2:n.14C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.*22C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.*22C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1377C>G
  hgvsp: ENST00000451782.2:c.1377C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1371C>G
  hgvsp: ENST00000558379.1:c.1371C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro462Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

15-70347595-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347595
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347595
    reference: chr 15
allele count: 3
allele frequency: 2.600464616344787e-5
allele num: 115364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1371C>T
  hgvsp: ENST00000451782.2:c.1371C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1365C>T
  hgvsp: ENST00000558379.1:c.1365C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1212C>T
  hgvsp: ENST00000560589.1:c.1212C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1161C>T
  hgvsp: ENST00000539550.1:c.1161C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1386C>T
  hgvsp: ENST00000560939.1:c.1386C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.*16C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1344C>T
  hgvsp: ENST00000317509.8:c.1344C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1398C>T
  hgvsp: ENST00000558201.1:c.1398C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1592C>T
  hgvsp: ENST00000560525.1:c.1592C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1356C>T
  hgvsp: ENST00000557997.1:c.1356C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.123C>T
  hgvsp: ENST00000559191.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1356C>T
  hgvsp: ENST00000557907.1:c.1356C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1410C>T
  hgvsp: ENST00000559929.1:c.1410C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1380C>T
  hgvsp: ENST00000559048.1:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2436C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.*16C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000542329
  gene symbol: TLE3
  hgvsc: ENST00000542329.2:n.8C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1356C>T
  hgvsp: ENST00000442299.2:c.1356C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1380C>T
  hgvsp: ENST00000558939.1:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro460Pro
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

15-70347613-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347613
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347613
    reference: chr 15
allele count: 3
allele frequency: 2.648585655260091e-5
allele num: 113268
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1338T>A
  hgvsp: ENST00000557997.1:c.1338T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1362T>A
  hgvsp: ENST00000558939.1:c.1362T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1332T>A
  hgvsp: ENST00000440567.3:c.1332T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: stop_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1336T>A
  hgvsp: ENSP00000452803.1:p.Ter446ArgextTer88
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: stop_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1345T>A
  hgvsp: ENSP00000453373.1:p.Ter449ArgextTer88
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1326T>A
  hgvsp: ENST00000317509.8:c.1326T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1347T>A
  hgvsp: ENST00000558379.1:c.1347T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1338T>A
  hgvsp: ENST00000442299.2:c.1338T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1194T>A
  hgvsp: ENST00000560589.1:c.1194T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1353T>A
  hgvsp: ENST00000451782.2:c.1353T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2418T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1392T>A
  hgvsp: ENST00000559929.1:c.1392T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1368T>A
  hgvsp: ENST00000560939.1:c.1368T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1338T>A
  hgvsp: ENST00000557907.1:c.1338T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1380T>A
  hgvsp: ENST00000558201.1:c.1380T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1574T>A
  hgvsp: ENST00000560525.1:c.1574T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1143T>A
  hgvsp: ENST00000539550.1:c.1143T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1362T>A
  hgvsp: ENST00000559048.1:c.1362T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.105T>A
  hgvsp: ENST00000559191.1:c.105T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ter449ArgextTer88
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

15-70347622-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347622
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347622
    reference: chr 15
allele count: 19
allele frequency: 1.695611044674889e-4
allele num: 112054
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1338T>C
  hgvsp: ENST00000558379.1:c.1338T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1565T>C
  hgvsp: ENST00000560525.1:c.1565T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1353T>C
  hgvsp: ENST00000558939.1:c.1353T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1329T>C
  hgvsp: ENST00000442299.2:c.1329T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1344T>C
  hgvsp: ENST00000451782.2:c.1344T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1327T>C
  hgvsp: ENSP00000452803.1:p.Cys443Arg
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1359T>C
  hgvsp: ENST00000560939.1:c.1359T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1185T>C
  hgvsp: ENST00000560589.1:c.1185T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1371T>C
  hgvsp: ENST00000558201.1:c.1371T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1317T>C
  hgvsp: ENST00000317509.8:c.1317T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1134T>C
  hgvsp: ENST00000539550.1:c.1134T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1353T>C
  hgvsp: ENST00000559048.1:c.1353T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.96T>C
  hgvsp: ENST00000559191.1:c.96T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1336T>C
  hgvsp: ENSP00000453373.1:p.Cys446Arg
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1323T>C
  hgvsp: ENST00000440567.3:c.1323T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1329T>C
  hgvsp: ENST00000557907.1:c.1329T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2409T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1383T>C
  hgvsp: ENST00000559929.1:c.1383T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1329T>C
  hgvsp: ENST00000557997.1:c.1329T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Cys446Arg
num of homozygotes: 1
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP

15-70347634-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347634
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347634
    reference: chr 15
allele count: 3
allele frequency: 2.7214340142966e-5
allele num: 110236
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1332G>A
  hgvsp: ENST00000451782.2:c.1332G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1173G>A
  hgvsp: ENST00000560589.1:c.1173G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1553G>A
  hgvsp: ENST00000560525.1:c.1553G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1347G>A
  hgvsp: ENST00000560939.1:c.1347G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1317G>A
  hgvsp: ENST00000442299.2:c.1317G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1315G>A
  hgvsp: ENSP00000452803.1:p.Val439Ile
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1311G>A
  hgvsp: ENST00000440567.3:c.1311G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1317G>A
  hgvsp: ENST00000557997.1:c.1317G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1371G>A
  hgvsp: ENST00000559929.1:c.1371G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1326G>A
  hgvsp: ENST00000558379.1:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1324G>A
  hgvsp: ENSP00000453373.1:p.Val442Ile
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1317G>A
  hgvsp: ENST00000557907.1:c.1317G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1341G>A
  hgvsp: ENST00000558939.1:c.1341G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1305G>A
  hgvsp: ENST00000317509.8:c.1305G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2397G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.84G>A
  hgvsp: ENST00000559191.1:c.84G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1359G>A
  hgvsp: ENST00000558201.1:c.1359G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1341G>A
  hgvsp: ENST00000559048.1:c.1341G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1122G>A
  hgvsp: ENST00000539550.1:c.1122G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Val442Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/15-70347636-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347636
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347636
    reference: chr 15
allele count: 2
allele frequency: 1.81804959639299e-5
allele num: 110008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-1G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1330G>T
  hgvsp: ENSP00000394717.2:p.Ala444Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1309G>T
  hgvsp: ENSP00000415057.3:p.Ala437Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1551G>T
  hgvsp: ENSP00000453219.1:p.Ala518Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1345G>T
  hgvsp: ENSP00000452933.1:p.Ala449Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1324G>T
  hgvsp: ENSP00000453435.1:p.Ala442Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1315G>T
  hgvsp: ENSP00000453083.1:p.Ala439Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.82G>T
  hgvsp: ENSP00000454029.1:p.Ala28Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1120G>T
  hgvsp: ENSP00000442594.1:p.Ala374Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1369G>T
  hgvsp: ENSP00000453081.1:p.Ala457Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1303G>T
  hgvsp: ENSP00000319233.8:p.Ala435Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1315G>T
  hgvsp: ENSP00000390007.2:p.Ala439Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-1G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1171G>T
  hgvsp: ENSP00000454141.1:p.Ala391Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1315G>T
  hgvsp: ENSP00000453107.1:p.Ala439Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2395G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1357G>T
  hgvsp: ENSP00000452881.1:p.Ala453Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1339G>T
  hgvsp: ENSP00000453760.1:p.Ala447Ser
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.1323-1G>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

15-70347640-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347640
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347640
    reference: chr 15
allele count: 15
allele frequency: 1.374482278341825e-4
allele num: 109132
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1119-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1550-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-5C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1344-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1314-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1356-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1314-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1308-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.81-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2391C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1338-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1170-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1314-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-5C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1323-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1329-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1302-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1368-3C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1338-3C>T
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.1338-3C>T
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/15-70347644-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347644
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347644
    reference: chr 15
allele count: 1
allele frequency: 9.163551059306502e-6
allele num: 109128
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1329-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1314-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1550-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1368-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1308-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.81-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1314-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1344-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-9T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1338-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1314-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1170-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1119-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1323-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1302-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1338-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1356-7T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-9T>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2387T>G
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.1338-7T>G
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

15-70347646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347646
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347646
    reference: chr 15
allele count: 1
allele frequency: 9.198447302095407e-6
allele num: 108714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1344-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1170-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1314-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2385C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1119-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1356-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1338-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1368-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1329-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1550-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1308-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1314-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1314-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1338-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1323-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1302-9C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.81-9C>T
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

15-70347648-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347648
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347648
    reference: chr 15
allele count: 1
allele frequency: 9.200647725599883e-6
allele num: 108688
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1338-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-13C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1338-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1550-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-13C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2383C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1314-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1308-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1119-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1356-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1344-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1170-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.81-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1368-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1323-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1314-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1302-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1314-11C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1329-11C>T
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

15-70347655-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347655
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347655
    reference: chr 15
allele count: 37
allele frequency: 3.422186869901404e-4
allele num: 108118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1344-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1314-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1308-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1170-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1550-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1356-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-20G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1314-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2376G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1368-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1338-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1314-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1119-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1323-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1302-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.81-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-20G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1329-18G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1338-18G>A
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD

15-70347656-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347656
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347656
    reference: chr 15
allele count: 3
allele frequency: 2.776697950796912e-5
allele num: 108042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1308-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1314-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1302-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2375C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1344-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1329-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1338-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1550-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1119-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1314-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1368-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1314-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1356-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1338-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1170-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1323-19C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.81-19C>T
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37554
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

15-70347675-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347675
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347675
    reference: chr 15
allele count: 1
allele frequency: 9.338114447930673e-6
allele num: 107088
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1368-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-40G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1314-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1356-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1550-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1314-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1323-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2356G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1314-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1170-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1344-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.81-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1119-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-40G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1302-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1338-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1329-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1338-38G>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1308-38G>C
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

15-70347676-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347676
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347676
    reference: chr 15
allele count: 147
allele frequency: 1.373190098085007e-3
allele num: 107050
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1323-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.81-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1338-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1550-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1329-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-41G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1368-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-41G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1356-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1119-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1302-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1344-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1314-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2355G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1170-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1314-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1314-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1308-39G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1338-39G>A
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 7.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

15-70347677-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347677
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347677
    reference: chr 15
allele count: 4
allele frequency: 3.738038277511962e-5
allele num: 107008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1314-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1314-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-42C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1550-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1338-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1329-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1368-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-42C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1314-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1338-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1356-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2354C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1344-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1170-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1323-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.81-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1119-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1308-40C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1302-40C>T
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4179
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

15-70347684-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70347684
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70347684
    reference: chr 15
allele count: 1
allele frequency: 9.35698779848791e-6
allele num: 106872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1329-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1368-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1308-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1302-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1356-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1550-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1170-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1314-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1338-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.81-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.2347G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1344-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1314-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1119-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1314-49G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1323-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1314-47G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1323-49G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1338-47G>A
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum

15-70348593-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348593
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348593
    reference: chr 15
allele count: 1
allele frequency: 8.346966712296751e-6
allele num: 119804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1438G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+44G>A
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9257
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-70348598-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348598
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348598
    reference: chr 15
allele count: 2
allele frequency: 1.669588446447951e-5
allele num: 119790
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1433G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+39G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+39G>T
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/15-70348602-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348602
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348602
    reference: chr 15
allele count: 1
allele frequency: 8.346827370916315e-6
allele num: 119806
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1429G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+35G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+35G>T
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

15-70348616-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348616
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348616
    reference: chr 15
allele count: 3
allele frequency: 2.502627759147104e-5
allele num: 119874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1415C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+21C>T
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

15-70348617-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348617
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348617
    reference: chr 15
allele count: 1
allele frequency: 8.341953351796856e-6
allele num: 119876
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1414A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+20A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+20A>G
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ

15-70348618-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348618
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348618
    reference: chr 15
allele count: 1
allele frequency: 8.342231713828083e-6
allele num: 119872
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1413T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+19T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+19T>C
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

15-70348623-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348623
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348623
    reference: chr 15
allele count: 3
allele frequency: 2.502794787512722e-5
allele num: 119866
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1408A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+14A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+14A>G
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

15-70348625-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348625
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348625
    reference: chr 15
allele count: 531
allele frequency: 4.429651133690374e-3
allele num: 119874
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1406C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+12C>G
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7392
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
num of homozygotes: 18
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

15-70348626-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348626
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348626
    reference: chr 15
allele count: 2
allele frequency: 1.66841850609807e-5
allele num: 119874
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1405G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+11G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+11G>A
  variant of: http://identifiers.org/hgnc/11839
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

15-70348629-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348629
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348629
    reference: chr 15
allele count: 1
allele frequency: 8.340561820244212e-6
allele num: 119896
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1402T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+8T>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+8T>A
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.1337+8T>A
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

15-70348634-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348634
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348634
    reference: chr 15
allele count: 3
allele frequency: 2.502001601281025e-5
allele num: 119904
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1397A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1307+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1322+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1322+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.80+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1118+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1313+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1169+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1313+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1313+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1337+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1343+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1313+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1301+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1355+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1337+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1367+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1549+3A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1328+3A>G
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.1337+3A>G
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

15-70348653-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348653
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348653
    reference: chr 15
allele count: 1
allele frequency: 8.347106058329577e-6
allele num: 119802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1297A>G
  hgvsp: ENSP00000453107.1:p.Ile433Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1312A>G
  hgvsp: ENSP00000394717.2:p.Ile438Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1297A>G
  hgvsp: ENSP00000390007.2:p.Ile433Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1339A>G
  hgvsp: ENSP00000452881.1:p.Ile447Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1153A>G
  hgvsp: ENSP00000454141.1:p.Ile385Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1321A>G
  hgvsp: ENSP00000453760.1:p.Ile441Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1285A>G
  hgvsp: ENSP00000319233.8:p.Ile429Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1102A>G
  hgvsp: ENSP00000442594.1:p.Ile368Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.64A>G
  hgvsp: ENSP00000454029.1:p.Ile22Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1291A>G
  hgvsp: ENSP00000415057.3:p.Ile431Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1297A>G
  hgvsp: ENSP00000453083.1:p.Ile433Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1351A>G
  hgvsp: ENSP00000453081.1:p.Ile451Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1327A>G
  hgvsp: ENSP00000452933.1:p.Ile443Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1306A>G
  hgvsp: ENSP00000453373.1:p.Ile436Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1306A>G
  hgvsp: ENSP00000453435.1:p.Ile436Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1378A>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1321A>G
  hgvsp: ENSP00000452871.1:p.Ile441Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1533A>G
  hgvsp: ENSP00000453219.1:p.Ile512Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1297A>G
  hgvsp: ENSP00000452803.1:p.Ile433Val
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ile441Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP

15-70348657-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348657
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348657
    reference: chr 15
allele count: 1
allele frequency: 8.349057391420508e-6
allele num: 119774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.60C>T
  hgvsp: ENST00000559191.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1293C>T
  hgvsp: ENST00000557907.1:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1098C>T
  hgvsp: ENST00000539550.1:c.1098C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1302C>T
  hgvsp: ENST00000558379.1:c.1302C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1302C>T
  hgvsp: ENST00000561453.1:c.1302C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1347C>T
  hgvsp: ENST00000559929.1:c.1347C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1317C>T
  hgvsp: ENST00000559048.1:c.1317C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1308C>T
  hgvsp: ENST00000451782.2:c.1308C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1317C>T
  hgvsp: ENST00000558939.1:c.1317C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1293C>T
  hgvsp: ENST00000557997.1:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1323C>T
  hgvsp: ENST00000560939.1:c.1323C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1293C>T
  hgvsp: ENST00000557919.1:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1529C>T
  hgvsp: ENST00000560525.1:c.1529C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1374C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1281C>T
  hgvsp: ENST00000317509.8:c.1281C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1287C>T
  hgvsp: ENST00000440567.3:c.1287C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1293C>T
  hgvsp: ENST00000442299.2:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1149C>T
  hgvsp: ENST00000560589.1:c.1149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1335C>T
  hgvsp: ENST00000558201.1:c.1335C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala439Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

15-70348659-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348659
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348659
    reference: chr 15
allele count: 3
allele frequency: 2.505219206680585e-5
allele num: 119750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1372G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1527G>A
  hgvsp: ENSP00000453219.1:p.Ala510Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1291G>A
  hgvsp: ENSP00000453107.1:p.Ala431Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1315G>A
  hgvsp: ENSP00000453760.1:p.Ala439Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1321G>A
  hgvsp: ENSP00000452933.1:p.Ala441Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1300G>A
  hgvsp: ENSP00000453435.1:p.Ala434Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1096G>A
  hgvsp: ENSP00000442594.1:p.Ala366Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1291G>A
  hgvsp: ENSP00000452803.1:p.Ala431Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1306G>A
  hgvsp: ENSP00000394717.2:p.Ala436Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1291G>A
  hgvsp: ENSP00000453083.1:p.Ala431Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.58G>A
  hgvsp: ENSP00000454029.1:p.Ala20Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1291G>A
  hgvsp: ENSP00000390007.2:p.Ala431Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1345G>A
  hgvsp: ENSP00000453081.1:p.Ala449Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1285G>A
  hgvsp: ENSP00000415057.3:p.Ala429Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1315G>A
  hgvsp: ENSP00000452871.1:p.Ala439Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1279G>A
  hgvsp: ENSP00000319233.8:p.Ala427Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1333G>A
  hgvsp: ENSP00000452881.1:p.Ala445Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1300G>A
  hgvsp: ENSP00000453373.1:p.Ala434Thr
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1147G>A
  hgvsp: ENSP00000454141.1:p.Ala383Thr
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala439Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

15-70348665-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348665
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348665
    reference: chr 15
allele count: 4
allele frequency: 3.341408403642135e-5
allele num: 119710
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1285A>G
  hgvsp: ENSP00000453107.1:p.Ser429Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1521A>G
  hgvsp: ENSP00000453219.1:p.Ser508Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1285A>G
  hgvsp: ENSP00000390007.2:p.Ser429Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1294A>G
  hgvsp: ENSP00000453373.1:p.Ser432Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1090A>G
  hgvsp: ENSP00000442594.1:p.Ser364Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1309A>G
  hgvsp: ENSP00000453760.1:p.Ser437Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1339A>G
  hgvsp: ENSP00000453081.1:p.Ser447Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1141A>G
  hgvsp: ENSP00000454141.1:p.Ser381Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1285A>G
  hgvsp: ENSP00000452803.1:p.Ser429Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1327A>G
  hgvsp: ENSP00000452881.1:p.Ser443Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.52A>G
  hgvsp: ENSP00000454029.1:p.Ser18Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1309A>G
  hgvsp: ENSP00000452871.1:p.Ser437Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1294A>G
  hgvsp: ENSP00000453435.1:p.Ser432Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1285A>G
  hgvsp: ENSP00000453083.1:p.Ser429Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1279A>G
  hgvsp: ENSP00000415057.3:p.Ser427Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1273A>G
  hgvsp: ENSP00000319233.8:p.Ser425Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1300A>G
  hgvsp: ENSP00000394717.2:p.Ser434Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1315A>G
  hgvsp: ENSP00000452933.1:p.Ser439Gly
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1366A>G
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser437Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

15-70348671-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348671
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348671
    reference: chr 15
allele count: 1
allele frequency: 8.360085607276618e-6
allele num: 119616
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1294C>T
  hgvsp: ENSP00000394717.2:p.Pro432Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1321C>T
  hgvsp: ENSP00000452881.1:p.Pro441Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1288C>T
  hgvsp: ENSP00000453435.1:p.Pro430Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1135C>T
  hgvsp: ENSP00000454141.1:p.Pro379Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1303C>T
  hgvsp: ENSP00000452871.1:p.Pro435Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1084C>T
  hgvsp: ENSP00000442594.1:p.Pro362Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1279C>T
  hgvsp: ENSP00000390007.2:p.Pro427Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1279C>T
  hgvsp: ENSP00000453107.1:p.Pro427Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1515C>T
  hgvsp: ENSP00000453219.1:p.Pro506Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.46C>T
  hgvsp: ENSP00000454029.1:p.Pro16Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1288C>T
  hgvsp: ENSP00000453373.1:p.Pro430Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1333C>T
  hgvsp: ENSP00000453081.1:p.Pro445Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1279C>T
  hgvsp: ENSP00000453083.1:p.Pro427Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1303C>T
  hgvsp: ENSP00000453760.1:p.Pro435Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1360C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1273C>T
  hgvsp: ENSP00000415057.3:p.Pro425Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1267C>T
  hgvsp: ENSP00000319233.8:p.Pro423Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1309C>T
  hgvsp: ENSP00000452933.1:p.Pro437Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1279C>T
  hgvsp: ENSP00000452803.1:p.Pro427Ser
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro435Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

15-70348672-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348672
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348672
    reference: chr 15
allele count: 4
allele frequency: 3.344090156670624e-5
allele num: 119614
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1302C>T
  hgvsp: ENST00000558939.1:c.1302C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1083C>T
  hgvsp: ENST00000539550.1:c.1083C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1320C>T
  hgvsp: ENST00000558201.1:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1278C>T
  hgvsp: ENST00000557919.1:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1278C>T
  hgvsp: ENST00000442299.2:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1272C>T
  hgvsp: ENST00000440567.3:c.1272C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1302C>T
  hgvsp: ENST00000559048.1:c.1302C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1287C>T
  hgvsp: ENST00000561453.1:c.1287C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1278C>T
  hgvsp: ENST00000557997.1:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1278C>T
  hgvsp: ENST00000557907.1:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1134C>T
  hgvsp: ENST00000560589.1:c.1134C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1332C>T
  hgvsp: ENST00000559929.1:c.1332C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1359C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1293C>T
  hgvsp: ENST00000451782.2:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1514C>T
  hgvsp: ENST00000560525.1:c.1514C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1308C>T
  hgvsp: ENST00000560939.1:c.1308C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1287C>T
  hgvsp: ENST00000558379.1:c.1287C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.45C>T
  hgvsp: ENST00000559191.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1266C>T
  hgvsp: ENST00000317509.8:c.1266C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu434Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

15-70348674-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348674
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348674
    reference: chr 15
allele count: 1
allele frequency: 8.360924383799873e-6
allele num: 119604
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1276C>T
  hgvsp: ENSP00000390007.2:p.Leu426Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1132C>T
  hgvsp: ENSP00000454141.1:p.Leu378Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1357C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1512C>T
  hgvsp: ENSP00000453219.1:p.Leu505Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1300C>T
  hgvsp: ENSP00000453760.1:p.Leu434Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1276C>T
  hgvsp: ENSP00000452803.1:p.Leu426Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1330C>T
  hgvsp: ENSP00000453081.1:p.Leu444Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1318C>T
  hgvsp: ENSP00000452881.1:p.Leu440Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.43C>T
  hgvsp: ENSP00000454029.1:p.Leu15Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1300C>T
  hgvsp: ENSP00000452871.1:p.Leu434Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1285C>T
  hgvsp: ENSP00000453373.1:p.Leu429Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1276C>T
  hgvsp: ENSP00000453083.1:p.Leu426Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1291C>T
  hgvsp: ENSP00000394717.2:p.Leu431Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1264C>T
  hgvsp: ENSP00000319233.8:p.Leu422Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1081C>T
  hgvsp: ENSP00000442594.1:p.Leu361Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1276C>T
  hgvsp: ENSP00000453107.1:p.Leu426Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1285C>T
  hgvsp: ENSP00000453435.1:p.Leu429Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1270C>T
  hgvsp: ENSP00000415057.3:p.Leu424Phe
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1306C>T
  hgvsp: ENSP00000452933.1:p.Leu436Phe
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu434Phe
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

15-70348677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348677
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348677
    reference: chr 15
allele count: 1
allele frequency: 8.366100560528738e-6
allele num: 119530
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1273G>A
  hgvsp: ENSP00000453107.1:p.Gly425Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1282G>A
  hgvsp: ENSP00000453435.1:p.Gly428Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1288G>A
  hgvsp: ENSP00000394717.2:p.Gly430Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1315G>A
  hgvsp: ENSP00000452881.1:p.Gly439Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1267G>A
  hgvsp: ENSP00000415057.3:p.Gly423Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1297G>A
  hgvsp: ENSP00000453760.1:p.Gly433Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1327G>A
  hgvsp: ENSP00000453081.1:p.Gly443Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1078G>A
  hgvsp: ENSP00000442594.1:p.Gly360Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1297G>A
  hgvsp: ENSP00000452871.1:p.Gly433Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1273G>A
  hgvsp: ENSP00000453083.1:p.Gly425Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1129G>A
  hgvsp: ENSP00000454141.1:p.Gly377Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1261G>A
  hgvsp: ENSP00000319233.8:p.Gly421Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1509G>A
  hgvsp: ENSP00000453219.1:p.Gly504Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1273G>A
  hgvsp: ENSP00000390007.2:p.Gly425Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1273G>A
  hgvsp: ENSP00000452803.1:p.Gly425Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1354G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1282G>A
  hgvsp: ENSP00000453373.1:p.Gly428Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.40G>A
  hgvsp: ENSP00000454029.1:p.Gly14Ser
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1303G>A
  hgvsp: ENSP00000452933.1:p.Gly435Ser
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gly433Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD

15-70348682-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348682
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348682
    reference: chr 15
allele count: 3
allele frequency: 2.51226824325456e-5
allele num: 119414
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1292C>T
  hgvsp: ENSP00000452871.1:p.Ala431Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1124C>T
  hgvsp: ENSP00000454141.1:p.Ala375Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1073C>T
  hgvsp: ENSP00000442594.1:p.Ala358Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.35C>T
  hgvsp: ENSP00000454029.1:p.Ala12Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1262C>T
  hgvsp: ENSP00000415057.3:p.Ala421Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1504C>T
  hgvsp: ENSP00000453219.1:p.Ala502Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1268C>T
  hgvsp: ENSP00000390007.2:p.Ala423Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1268C>T
  hgvsp: ENSP00000453107.1:p.Ala423Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1292C>T
  hgvsp: ENSP00000453760.1:p.Ala431Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1322C>T
  hgvsp: ENSP00000453081.1:p.Ala441Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1268C>T
  hgvsp: ENSP00000453083.1:p.Ala423Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1310C>T
  hgvsp: ENSP00000452881.1:p.Ala437Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1298C>T
  hgvsp: ENSP00000452933.1:p.Ala433Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1268C>T
  hgvsp: ENSP00000452803.1:p.Ala423Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1277C>T
  hgvsp: ENSP00000453435.1:p.Ala426Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1256C>T
  hgvsp: ENSP00000319233.8:p.Ala419Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1283C>T
  hgvsp: ENSP00000394717.2:p.Ala428Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1349C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1277C>T
  hgvsp: ENSP00000453373.1:p.Ala426Val
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala431Val
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

15-70348685-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348685
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348685
    reference: chr 15
allele count: 1
allele frequency: 8.376191513242758e-6
allele num: 119386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1274G>A
  hgvsp: ENSP00000453373.1:p.Arg425Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1501G>A
  hgvsp: ENSP00000453219.1:p.Arg501Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1307G>A
  hgvsp: ENSP00000452881.1:p.Arg436Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1280G>A
  hgvsp: ENSP00000394717.2:p.Arg427Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1319G>A
  hgvsp: ENSP00000453081.1:p.Arg440Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1289G>A
  hgvsp: ENSP00000452871.1:p.Arg430Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1289G>A
  hgvsp: ENSP00000453760.1:p.Arg430Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1259G>A
  hgvsp: ENSP00000415057.3:p.Arg420Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1265G>A
  hgvsp: ENSP00000453083.1:p.Arg422Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1265G>A
  hgvsp: ENSP00000453107.1:p.Arg422Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1253G>A
  hgvsp: ENSP00000319233.8:p.Arg418Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1265G>A
  hgvsp: ENSP00000390007.2:p.Arg422Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1070G>A
  hgvsp: ENSP00000442594.1:p.Arg357Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1265G>A
  hgvsp: ENSP00000452803.1:p.Arg422Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1295G>A
  hgvsp: ENSP00000452933.1:p.Arg432Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.32G>A
  hgvsp: ENSP00000454029.1:p.Arg11Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1274G>A
  hgvsp: ENSP00000453435.1:p.Arg425Gln
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1346G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1121G>A
  hgvsp: ENSP00000454141.1:p.Arg374Gln
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg430Gln
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

15-70348690-C-CG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348690
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348691
    reference: chr 15
allele count: 2
allele frequency: 1.678810059429876e-5
allele num: 119132
alternate allele: CG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1259dupC
  hgvsp: ENSP00000453107.1:p.Met421AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1268dupC
  hgvsp: ENSP00000453435.1:p.Met424AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1259dupC
  hgvsp: ENSP00000452803.1:p.Met421AspfsTer24
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1253dupC
  hgvsp: ENSP00000415057.3:p.Met419AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.26dupC
  hgvsp: ENSP00000454029.1:p.Met10AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1301dupC
  hgvsp: ENSP00000452881.1:p.Met435AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1268dupC
  hgvsp: ENSP00000453373.1:p.Met424AspfsTer24
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1283dupC
  hgvsp: ENSP00000453760.1:p.Met429AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1340dupC
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1064dupC
  hgvsp: ENSP00000442594.1:p.Met356AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1289dupC
  hgvsp: ENSP00000452933.1:p.Met431AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1115dupC
  hgvsp: ENSP00000454141.1:p.Met373AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1495dupC
  hgvsp: ENSP00000453219.1:p.Met500AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1313dupC
  hgvsp: ENSP00000453081.1:p.Met439AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1283dupC
  hgvsp: ENSP00000452871.1:p.Met429AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1259dupC
  hgvsp: ENSP00000453083.1:p.Met421AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1247dupC
  hgvsp: ENSP00000319233.8:p.Met417AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1259dupC
  hgvsp: ENSP00000390007.2:p.Met421AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1274dupC
  hgvsp: ENSP00000394717.2:p.Met426AspfsTer27
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Met429AspfsTer27
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

15-70348690-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348690
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348690
    reference: chr 15
allele count: 4
allele frequency: 3.357620118859753e-5
allele num: 119132
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1269G>A
  hgvsp: ENST00000561453.1:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1260G>A
  hgvsp: ENST00000442299.2:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1269G>A
  hgvsp: ENST00000558379.1:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1116G>A
  hgvsp: ENST00000560589.1:c.1116G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1284G>A
  hgvsp: ENST00000559048.1:c.1284G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1248G>A
  hgvsp: ENST00000317509.8:c.1248G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1254G>A
  hgvsp: ENST00000440567.3:c.1254G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1275G>A
  hgvsp: ENST00000451782.2:c.1275G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1065G>A
  hgvsp: ENST00000539550.1:c.1065G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1496G>A
  hgvsp: ENST00000560525.1:c.1496G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1302G>A
  hgvsp: ENST00000558201.1:c.1302G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1284G>A
  hgvsp: ENST00000558939.1:c.1284G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1314G>A
  hgvsp: ENST00000559929.1:c.1314G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1260G>A
  hgvsp: ENST00000557997.1:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1290G>A
  hgvsp: ENST00000560939.1:c.1290G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1260G>A
  hgvsp: ENST00000557919.1:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1260G>A
  hgvsp: ENST00000557907.1:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1341G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.27G>A
  hgvsp: ENST00000559191.1:c.27G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro428Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

15-70348693-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348693
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348693
    reference: chr 15
allele count: 1
allele frequency: 8.392641332080031e-6
allele num: 119152
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1257C>G
  hgvsp: ENST00000557997.1:c.1257C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1281C>G
  hgvsp: ENST00000558939.1:c.1281C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1245C>G
  hgvsp: ENST00000317509.8:c.1245C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.24C>G
  hgvsp: ENST00000559191.1:c.24C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1266C>G
  hgvsp: ENST00000558379.1:c.1266C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1257C>G
  hgvsp: ENST00000557919.1:c.1257C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1311C>G
  hgvsp: ENST00000559929.1:c.1311C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1299C>G
  hgvsp: ENST00000558201.1:c.1299C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1257C>G
  hgvsp: ENST00000557907.1:c.1257C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1062C>G
  hgvsp: ENST00000539550.1:c.1062C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1272C>G
  hgvsp: ENST00000451782.2:c.1272C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1493C>G
  hgvsp: ENST00000560525.1:c.1493C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1266C>G
  hgvsp: ENST00000561453.1:c.1266C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1281C>G
  hgvsp: ENST00000559048.1:c.1281C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1113C>G
  hgvsp: ENST00000560589.1:c.1113C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1338C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1257C>G
  hgvsp: ENST00000442299.2:c.1257C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1251C>G
  hgvsp: ENST00000440567.3:c.1251C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1287C>G
  hgvsp: ENST00000560939.1:c.1287C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro427Pro
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

15-70348693-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348693
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348693
    reference: chr 15
allele count: 42
allele frequency: 3.524909359473613e-4
allele num: 119152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1281C>A
  hgvsp: ENST00000559048.1:c.1281C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1245C>A
  hgvsp: ENST00000317509.8:c.1245C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.24C>A
  hgvsp: ENST00000559191.1:c.24C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1266C>A
  hgvsp: ENST00000561453.1:c.1266C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1113C>A
  hgvsp: ENST00000560589.1:c.1113C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1257C>A
  hgvsp: ENST00000557997.1:c.1257C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1257C>A
  hgvsp: ENST00000557907.1:c.1257C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1272C>A
  hgvsp: ENST00000451782.2:c.1272C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1338C>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1062C>A
  hgvsp: ENST00000539550.1:c.1062C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1257C>A
  hgvsp: ENST00000442299.2:c.1257C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1251C>A
  hgvsp: ENST00000440567.3:c.1251C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1287C>A
  hgvsp: ENST00000560939.1:c.1287C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1311C>A
  hgvsp: ENST00000559929.1:c.1311C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1493C>A
  hgvsp: ENST00000560525.1:c.1493C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1266C>A
  hgvsp: ENST00000558379.1:c.1266C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1299C>A
  hgvsp: ENST00000558201.1:c.1299C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1257C>A
  hgvsp: ENST00000557919.1:c.1257C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1281C>A
  hgvsp: ENST00000558939.1:c.1281C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro427Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ

15-70348695-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348695
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348695
    reference: chr 15
allele count: 1
allele frequency: 8.397433744247758e-6
allele num: 119084
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1060C>G
  hgvsp: ENSP00000442594.1:p.Pro354Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1243C>G
  hgvsp: ENSP00000319233.8:p.Pro415Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1255C>G
  hgvsp: ENSP00000452803.1:p.Pro419Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1255C>G
  hgvsp: ENSP00000453083.1:p.Pro419Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1264C>G
  hgvsp: ENSP00000453373.1:p.Pro422Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1255C>G
  hgvsp: ENSP00000390007.2:p.Pro419Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.22C>G
  hgvsp: ENSP00000454029.1:p.Pro8Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1336C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1309C>G
  hgvsp: ENSP00000453081.1:p.Pro437Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1285C>G
  hgvsp: ENSP00000452933.1:p.Pro429Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1491C>G
  hgvsp: ENSP00000453219.1:p.Pro498Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1279C>G
  hgvsp: ENSP00000453760.1:p.Pro427Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1264C>G
  hgvsp: ENSP00000453435.1:p.Pro422Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1111C>G
  hgvsp: ENSP00000454141.1:p.Pro371Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1270C>G
  hgvsp: ENSP00000394717.2:p.Pro424Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1255C>G
  hgvsp: ENSP00000453107.1:p.Pro419Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1279C>G
  hgvsp: ENSP00000452871.1:p.Pro427Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1249C>G
  hgvsp: ENSP00000415057.3:p.Pro417Ala
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1297C>G
  hgvsp: ENSP00000452881.1:p.Pro433Ala
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro427Ala
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

15-70348700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348700
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348700
    reference: chr 15
allele count: 1
allele frequency: 8.410287463625507e-6
allele num: 118902
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1055C>T
  hgvsp: ENSP00000442594.1:p.Pro352Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1244C>T
  hgvsp: ENSP00000415057.3:p.Pro415Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1280C>T
  hgvsp: ENSP00000452933.1:p.Pro427Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1250C>T
  hgvsp: ENSP00000453107.1:p.Pro417Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1238C>T
  hgvsp: ENSP00000319233.8:p.Pro413Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1292C>T
  hgvsp: ENSP00000452881.1:p.Pro431Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1274C>T
  hgvsp: ENSP00000452871.1:p.Pro425Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1265C>T
  hgvsp: ENSP00000394717.2:p.Pro422Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1259C>T
  hgvsp: ENSP00000453435.1:p.Pro420Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1486C>T
  hgvsp: ENSP00000453219.1:p.Pro496Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1250C>T
  hgvsp: ENSP00000452803.1:p.Pro417Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1250C>T
  hgvsp: ENSP00000453083.1:p.Pro417Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1304C>T
  hgvsp: ENSP00000453081.1:p.Pro435Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1106C>T
  hgvsp: ENSP00000454141.1:p.Pro369Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1274C>T
  hgvsp: ENSP00000453760.1:p.Pro425Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1250C>T
  hgvsp: ENSP00000390007.2:p.Pro417Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1331C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.17C>T
  hgvsp: ENSP00000454029.1:p.Pro6Leu
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1259C>T
  hgvsp: ENSP00000453373.1:p.Pro420Leu
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro425Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/15-70348709-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348709
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348709
    reference: chr 15
allele count: 1
allele frequency: 8.440385556812235e-6
allele num: 118478
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1295G>T
  hgvsp: ENSP00000453081.1:p.Gly432Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1241G>T
  hgvsp: ENSP00000453107.1:p.Gly414Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1250G>T
  hgvsp: ENSP00000453373.1:p.Gly417Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1477G>T
  hgvsp: ENSP00000453219.1:p.Gly493Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1283G>T
  hgvsp: ENSP00000452881.1:p.Gly428Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1265G>T
  hgvsp: ENSP00000453760.1:p.Gly422Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1241G>T
  hgvsp: ENSP00000452803.1:p.Gly414Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1271G>T
  hgvsp: ENSP00000452933.1:p.Gly424Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1250G>T
  hgvsp: ENSP00000453435.1:p.Gly417Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1235G>T
  hgvsp: ENSP00000415057.3:p.Gly412Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1241G>T
  hgvsp: ENSP00000390007.2:p.Gly414Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1322G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1046G>T
  hgvsp: ENSP00000442594.1:p.Gly349Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1241G>T
  hgvsp: ENSP00000453083.1:p.Gly414Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1265G>T
  hgvsp: ENSP00000452871.1:p.Gly422Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.8G>T
  hgvsp: ENSP00000454029.1:p.Gly3Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1256G>T
  hgvsp: ENSP00000394717.2:p.Gly419Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1097G>T
  hgvsp: ENSP00000454141.1:p.Gly366Val
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1229G>T
  hgvsp: ENSP00000319233.8:p.Gly410Val
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gly422Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

15-70348717-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348717
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348717
    reference: chr 15
allele count: 1
allele frequency: 8.484210883545722e-6
allele num: 117866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-4A>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-4A>T
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.1261-4A>T
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-70348722-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348722
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348722
    reference: chr 15
allele count: 1
allele frequency: 8.526166805927391e-6
allele num: 117286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-9G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-9G>T
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4773
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

15-70348722-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348722
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348722
    reference: chr 15
allele count: 4
allele frequency: 3.410466722370956e-5
allele num: 117286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-9G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-9G>A
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4773
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

15-70348725-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348725
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348725
    reference: chr 15
allele count: 1
allele frequency: 8.529948649709128e-6
allele num: 117234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-12C>G
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-12C>G
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ

15-70348734-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348734
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348734
    reference: chr 15
allele count: 1
allele frequency: 8.576917798819816e-6
allele num: 116592
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-21C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-21C>T
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

15-70348744-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348744
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348744
    reference: chr 15
allele count: 1
allele frequency: 8.671823511047903e-6
allele num: 115316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-31T>C
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-31T>C
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5799
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

15-70348747-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348747
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348747
    reference: chr 15
allele count: 4
allele frequency: 3.486081818340276e-5
allele num: 114742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-34G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-34G>A
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

15-70348748-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348748
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348748
    reference: chr 15
allele count: 2
allele frequency: 1.742980147456121e-5
allele num: 114746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-35C>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-35C>T
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

15-70348757-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348757
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348757
    reference: chr 15
allele count: 3
allele frequency: 2.64844536257217e-5
allele num: 113274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-44G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-44G>A
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7323
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/15-70348759-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348759
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348759
    reference: chr 15
allele count: 1
allele frequency: 8.869022278983965e-6
allele num: 112752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-46G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-46G>T
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/15-70348760-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348760
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348759
    reference: chr 15
allele count: 1
allele frequency: 8.896163974094371e-6
allele num: 112408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-48delG
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-48delG
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4852
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: AC
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/15-70348761-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348761
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348761
    reference: chr 15
allele count: 1
allele frequency: 8.861006255870417e-6
allele num: 112854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-48G>T
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-48G>T
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

15-70348761-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 70348761
    reference: chr 15
  end: Position
    type: ExactPosition
    position: 70348761
    reference: chr 15
allele count: 1
allele frequency: 8.861006255870417e-6
allele num: 112854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453219
  ensembl transcript: ENST00000560525
  gene symbol: TLE3
  hgvsc: ENST00000560525.1:c.1473-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452803
  ensembl transcript: ENST00000557919
  gene symbol: TLE3
  hgvsc: ENST00000557919.1:c.1237-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452933
  ensembl transcript: ENST00000560939
  gene symbol: TLE3
  hgvsc: ENST00000560939.1:c.1267-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453760
  ensembl transcript: ENST00000559048
  gene symbol: TLE3
  hgvsc: ENST00000559048.1:c.1261-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl transcript: ENST00000557815
  gene symbol: TLE3
  hgvsc: ENST00000557815.1:n.1318-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000394717
  ensembl transcript: ENST00000451782
  gene symbol: TLE3
  hgvsc: ENST00000451782.2:c.1252-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453083
  ensembl transcript: ENST00000557997
  gene symbol: TLE3
  hgvsc: ENST00000557997.1:c.1237-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000319233
  ensembl transcript: ENST00000317509
  gene symbol: TLE3
  hgvsc: ENST00000317509.8:c.1225-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000415057
  ensembl transcript: ENST00000440567
  gene symbol: TLE3
  hgvsc: ENST00000440567.3:c.1231-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000390007
  ensembl transcript: ENST00000442299
  gene symbol: TLE3
  hgvsc: ENST00000442299.2:c.1237-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452881
  ensembl transcript: ENST00000558201
  gene symbol: TLE3
  hgvsc: ENST00000558201.1:c.1279-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453081
  ensembl transcript: ENST00000559929
  gene symbol: TLE3
  hgvsc: ENST00000559929.1:c.1291-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000442594
  ensembl transcript: ENST00000539550
  gene symbol: TLE3
  hgvsc: ENST00000539550.1:c.1042-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453373
  ensembl transcript: ENST00000561453
  gene symbol: TLE3
  hgvsc: ENST00000561453.1:c.1246-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000452871
  ensembl transcript: ENST00000558939
  gene symbol: TLE3
  hgvsc: ENST00000558939.1:c.1261-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453435
  ensembl transcript: ENST00000558379
  gene symbol: TLE3
  hgvsc: ENST00000558379.1:c.1246-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454029
  ensembl transcript: ENST00000559191
  gene symbol: TLE3
  hgvsc: ENST00000559191.1:c.4-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000453107
  ensembl transcript: ENST00000557907
  gene symbol: TLE3
  hgvsc: ENST00000557907.1:c.1237-48G>A
  variant of: http://identifiers.org/hgnc/11839
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000140332
  ensembl protein: ENSP00000454141
  ensembl transcript: ENST00000560589
  gene symbol: TLE3
  hgvsc: ENST00000560589.1:c.1093-48G>A
  variant of: http://identifiers.org/hgnc/11839
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4922
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000140332
ensembl protein: ENSP00000453107
ensembl transcript: ENST00000557907
gene symbol: TLE3
hgvsc: ENST00000557907.1:c.1369C>A
hgvsp: ENSP00000453107.1:p.His457Asn
variant of: http://identifiers.org/hgnc/11839

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 10846
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 719
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4519
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 598
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1809
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 39584
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1770
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 230
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 124
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2616
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3052
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6516
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.902263942573165e-5
allele num: 14488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

FS
type: SiteQuality
SIO_000300: 2.8056e1

VQSLOD
type: SiteQuality
SIO_000300: -3.16e0

QD
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 1.394001e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000140332
ensembl protein: ENSP00000453435
ensembl transcript: ENST00000558379
gene symbol: TLE3
hgvsc: ENST00000558379.1:c.1377C>T
hgvsp: ENST00000558379.1:c.1377C>T(p.%3D)
variant of: http://identifiers.org/hgnc/11839

GenotypeDepth
all individuals: 10816
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4520
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 716
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 248
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 124
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1810
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 614
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 229
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1856
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 39478
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6507
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 40556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529613313754283e-5
allele num: 65376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14416
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

FS
type: SiteQuality
SIO_000300: 5.25e-1

DP
type: SiteQuality
SIO_000300: 1.393563e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

QD
type: SiteQuality
SIO_000300: 1.068e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000140332
ensembl protein: ENSP00000453083
ensembl transcript: ENST00000557997
gene symbol: TLE3
hgvsc: ENST00000557997.1:c.1368C>G
hgvsp: ENST00000557997.1:c.1368C>G(p.%3D)
variant of: http://identifiers.org/hgnc/11839

GenotypeDepth
all individuals: 4520
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1856
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 9.75e1
variant carriers: 6

GenotypeDepth
all individuals: 39478
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1810
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 248
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 10816
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 124
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 716
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 614
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 229
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 23
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 3

GenotypeDepth
all individuals: 39
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1786
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6507
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 9.75e1
variant carriers: 19

South Asian
type: Population
allele count: 2
allele frequency: 1.387347391786903e-4
allele num: 14416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.059226627508566e-5
allele num: 65376
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.760150199483689e-3
allele num: 8522
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 5.25e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 1.393563e6

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

QD
type: SiteQuality
SIO_000300: 1.068e1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000140332
ensembl protein: ENSP00000394717
ensembl transcript: ENST00000451782
gene symbol: TLE3
hgvsc: ENST00000451782.2:c.1380C>A
hgvsp: ENSP00000394717.2:p.Phe460Leu
variant of: http://identifiers.org/hgnc/11839

GenotypeDepth
all individuals: 2163
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2056
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4489
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 318
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 709
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10533
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 39079
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 714
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6402
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39907
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2612
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3548
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533977603926983e-5
allele num: 65190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -9.423e-1

DP
type: SiteQuality
SIO_000300: 1.382399e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.406e0

MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 7.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000140332
ensembl protein: ENSP00000452881
ensembl transcript: ENST00000558201
gene symbol: TLE3
hgvsc: ENST00000558201.1:c.1404C>G
hgvsp: ENST00000558201.1:c.1404C>G(p.%3D)
variant of: http://identifiers.org/hgnc/11839

GenotypeDepth
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 704
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4470
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 343
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10467
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2235
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2155
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38973
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 712
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3711
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39802
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 860
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2614
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6401
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1789
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535202186127913e-5
allele num: 65138
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13852
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 1.324e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.413e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.56e0

FS
type: SiteQuality
SIO_000300: 6.74e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.392e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.066e0

DP
type: SiteQuality
SIO_000300: 1.379372e6

MQ
type: SiteQuality
SIO_000300: 5.95e1

Annotation
canonical: false
consequence: synonymous_variant
ensembl gene: ENSG00000140332
ensembl protein: ENSP00000415057
ensembl transcript: ENST00000440567
gene symbol: TLE3
hgvsc: ENST00000440567.3:c.1350C>T
hgvsp: ENST00000440567.3:c.1350C>T(p.%3D)
variant of: http://identifiers.org/hgnc/11839

GenotypeDepth
all individuals: 2434
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 4412
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 615
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 474
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 38827
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 44
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 712
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10265
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2310
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3990
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39431
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2167
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1789
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 9.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.074400491904078e-4
allele num: 9758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.370978e6

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

FS
type: SiteQuality
SIO_000300: 2.476e0

QD
type: SiteQuality
SIO_000300: 1.252e1

MQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

GenotypeDepth
all individuals: 232
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1031
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38444
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 712
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2259
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 267
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4380
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10002
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2932
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1084
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4389
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6305
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1792
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2599
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38927
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 743
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.666065262699474e-5
allele num: 64294
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.63e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.041e0

FS
type: SiteQuality
SIO_000300: 5.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.325e1

DP
type: SiteQuality
SIO_000300: 1.352853e6

GenotypeDepth
all individuals: 4366
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2939
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38273
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 179
bin: 1.75e1
variant carriers: 2

GenotypeDepth
all individuals: 9940
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1976
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 21
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 64
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1604
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 9.75e1
variant carriers: 5

GenotypeDepth
all individuals: 41
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 233
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 713
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2591
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6274
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1717
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4100
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38727
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2156
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 744
bin: 9.25e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 8.843296781039972e-5
allele num: 11308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 18
allele frequency: 2.142347060223756e-3
allele num: 8402
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.98e0

QD
type: SiteQuality
SIO_000300: 1.231e1

MQ
type: SiteQuality
SIO_000300: 5.947e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.33e-1

FS
type: SiteQuality
SIO_000300: 1.107e0

DP
type: SiteQuality
SIO_000300: 1.344542e6

GenotypeDepth
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 169
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9826
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4354
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2718
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2606
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38043
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 714
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1463
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 42
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3145
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6234
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2741
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2146
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38418
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.153977165205324e-5
allele num: 63412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.055966209081309e-4
allele num: 9470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.330287e6

VQSLOD
type: SiteQuality
SIO_000300: -9.032e-1

MQ
type: SiteQuality
SIO_000300: 5.881e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

QD
type: SiteQuality
SIO_000300: 1.115e1

Annotation
canonical: true
consequence: missense_variant
consequence: splice_region_variant
ensembl gene: ENSG00000140332
ensembl protein: ENSP00000452871
ensembl transcript: ENST00000558939
gene symbol: TLE3
hgvsc: ENST00000558939.1:c.1339G>T
hgvsp: ENSP00000452871.1:p.Ala447Ser
variant of: http://identifiers.org/hgnc/11839

GenotypeDepth
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2786
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4338
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2658
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 38016
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9809
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 24
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 715
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1397
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6229
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3080
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2145
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2584
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38399
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2912
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.157861496194777e-5
allele num: 63334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10070
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9460
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.179e0

QD
type: SiteQuality
SIO_000300: 9.91e0

FS
type: SiteQuality
SIO_000300: 4.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQ
type: SiteQuality
SIO_000300: 5.985e1

DP
type: SiteQuality
SIO_000300: 1.327895e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.72e-1

GenotypeDepth
all individuals: 4327
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 48
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1203
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9717
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 37860
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 711
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 22
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 3393
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2352
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 233
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 180
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3453
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2579
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6189
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38108
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2403
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1783
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2138
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 9.75e1
variant carriers: 15

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 10
allele frequency: 1.516990291262136e-3
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.929962570576667e-5
allele num: 63052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.272e1

DP
type: SiteQuality
SIO_000300: 1.31973e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.377e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

GenotypeDepth
all individuals: 25
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37858
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3433
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4320
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2362
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1171
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 717
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 236
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9729
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6188
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3529
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2136
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38208
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2578
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1785
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.586395075829685e-5
allele num: 63036
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9592
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.004e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.217e0

DP
type: SiteQuality
SIO_000300: 1.318851e6

QD
type: SiteQuality
SIO_000300: 1.199e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQ
type: SiteQuality
SIO_000300: 4.47e1

FS
type: SiteQuality
SIO_000300: 3.005e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.85e-1

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 225
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3679
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2197
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9611
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1174
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 235
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 717
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1785
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37917
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2232
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3733
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6158
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2574
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.06315118009781e-4
allele num: 9406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.04e0

QD
type: SiteQuality
SIO_000300: 1.088e1

FS
type: SiteQuality
SIO_000300: 4.788e0

DP
type: SiteQuality
SIO_000300: 1.31305e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.482e0

GenotypeDepth
all individuals: 43
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 717
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1162
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 37735
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9611
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3706
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2192
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 216
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 128
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4304
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2265
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3757
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2573
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37957
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.590431961320695e-5
allele num: 62876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9388
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.062e0

QD
type: SiteQuality
SIO_000300: 9.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.84e-1

DP
type: SiteQuality
SIO_000300: 1.312913e6

FS
type: SiteQuality
SIO_000300: 2.654e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

GenotypeDepth
all individuals: 327
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 9.75e1
variant carriers: 6

GenotypeDepth
all individuals: 1148
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 54
bin: 5.75e1
variant carriers: 4

GenotypeDepth
all individuals: 4009
bin: 2.5e0
variant carriers: 2

GenotypeDepth
all individuals: 713
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 9402
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 48
bin: 6.75e1
variant carriers: 5

GenotypeDepth
all individuals: 1957
bin: 7.5e0
variant carriers: 5

GenotypeDepth
all individuals: 235
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 37580
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 66
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 49
bin: 6.25e1
variant carriers: 3

GenotypeDepth
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 5

GenotypeDepth
all individuals: 4265
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 9.75e1
variant carriers: 37

GenotypeQuality
all individuals: 1940
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2566
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37566
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 324
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 282
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3926
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2118
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.394483110912458e-4
allele num: 62644
num of homozygotes: 0

East Asian
type: Population
allele count: 20
allele frequency: 2.416626389560174e-3
allele num: 8276
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.756543123133673e-4
allele num: 11386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9150
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

QD
type: SiteQuality
SIO_000300: 1.057e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

FS
type: SiteQuality
SIO_000300: 3.594e0

DP
type: SiteQuality
SIO_000300: 1.305768e6

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

GenotypeDepth
all individuals: 4046
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 48
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 712
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1931
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 344
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4257
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 241
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3943
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37528
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2117
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9130
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.208605269518975e-4
allele num: 8274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.194888178913738e-5
allele num: 62600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.303398e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.94e-1

FS
type: SiteQuality
SIO_000300: 3.851e0

VQSLOD
type: SiteQuality
SIO_000300: 5.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.523e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

QD
type: SiteQuality
SIO_000300: 1.249e1

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1082
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4236
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 248
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1627
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8939
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 48
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 715
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36246
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1309
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3590
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 403
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5967
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2092
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2566
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1774
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8992
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.613007290792954e-5
allele num: 61996
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

DP
type: SiteQuality
SIO_000300: 1.283752e6

VQSLOD
type: SiteQuality
SIO_000300: -6.616e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

QD
type: SiteQuality
SIO_000300: 1.371e1

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 1.063e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.193e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.577e0

GenotypeDepth
all individuals: 8885
bin: 2.75e1
variant carriers: 7

GenotypeDepth
all individuals: 12
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9
bin: 9.25e1
variant carriers: 4

GenotypeDepth
all individuals: 4243
bin: 2.5e0
variant carriers: 4

GenotypeDepth
all individuals: 60
bin: 6.25e1
variant carriers: 11

GenotypeDepth
all individuals: 70
bin: 5.75e1
variant carriers: 13

GenotypeDepth
all individuals: 29
bin: 7.75e1
variant carriers: 4

GenotypeDepth
all individuals: 28
bin: 7.25e1
variant carriers: 8

GenotypeDepth
all individuals: 1150
bin: 1.25e1
variant carriers: 6

GenotypeDepth
all individuals: 36708
bin: 2.25e1
variant carriers: 10

GenotypeDepth
all individuals: 264
bin: 4.25e1
variant carriers: 11

GenotypeDepth
all individuals: 1143
bin: 1.75e1
variant carriers: 7

GenotypeDepth
all individuals: 57
bin: 6.75e1
variant carriers: 11

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 4

GenotypeDepth
all individuals: 152
bin: 4.75e1
variant carriers: 6

GenotypeDepth
all individuals: 16
bin: 9.75e1
variant carriers: 11

GenotypeDepth
all individuals: 4174
bin: 3.25e1
variant carriers: 13

GenotypeQuality
all individuals: 859
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1058
bin: 9.75e1
variant carriers: 145

GenotypeQuality
all individuals: 748
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1771
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 436
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2087
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5934
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1271
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 370
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3522
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 491
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 36049
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 203
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

African
type: Population
allele count: 125
allele frequency: 1.366120218579235e-2
allele num: 9150
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.034822370735139e-4
allele num: 11372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.259084747950687e-4
allele num: 61972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

FS
type: SiteQuality
SIO_000300: 3.984e0

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

VQSLOD
type: SiteQuality
SIO_000300: 2.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

DP
type: SiteQuality
SIO_000300: 1.287632e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeDepth
all individuals: 729
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 36696
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1632
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1139
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 155
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1165
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8877
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4248
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5945
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36026
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2569
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 754
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2096
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8978
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.189141856392294e-4
allele num: 9136
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.22809735941636e-5
allele num: 61956
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-1

QD
type: SiteQuality
SIO_000300: 1.411e1

DP
type: SiteQuality
SIO_000300: 1.285829e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

GenotypeDepth
all individuals: 36693
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1093
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 153
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 83
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 273
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1139
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1670
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8824
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 748
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2108
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3181
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1078
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35157
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2582
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.21654501216545e-4
allele num: 8220
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.665e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 1.286045e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.299e0

QD
type: SiteQuality
SIO_000300: 5.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.142e0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e0

GenotypeDepth
all individuals: 8298
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8974
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 566
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 138
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 639
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7458
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3188
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 421
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 667
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 292
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1092
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6062
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4777
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2575
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3603
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3971
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5649
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12055
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3928
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2641
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24368
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.097e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 2.48872e6

QD
type: SiteQuality
SIO_000300: 1.539e1

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.42e-1

GenotypeDepth
all individuals: 121
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1699
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3655
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6061
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9300
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 639
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4778
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1093
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9061
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 525
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8304
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7460
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2574
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2639
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24363
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 221
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3598
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12415
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3950
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3919
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9686
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.289e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.74e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.03e-1

DP
type: SiteQuality
SIO_000300: 2.491023e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.419e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

QD
type: SiteQuality
SIO_000300: 1.56e1

GenotypeDepth
all individuals: 113
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9322
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6064
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9123
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1092
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8301
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7456
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1698
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 314
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3400
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 293
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2575
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 639
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4778
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24362
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2652
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5670
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3916
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2148
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3953
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12639
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.032631144155308e-4
allele num: 9684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.061e1

FS
type: SiteQuality
SIO_000300: 9.488e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.731e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.85e-1

DP
type: SiteQuality
SIO_000300: 2.492463e6

VQSLOD
type: SiteQuality
SIO_000300: -1.881e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 138
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8299
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 427
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 640
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3656
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4779
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6062
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9249
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 292
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7453
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9337
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2575
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1698
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1092
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13023
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3597
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3920
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3946
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2647
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24364
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9692
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817961459217065e-4
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

DP
type: SiteQuality
SIO_000300: 2.495416e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 5.73e-1

QD
type: SiteQuality
SIO_000300: 1.284e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 3.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.53e-1

GenotypeDepth
all individuals: 101
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 392
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3564
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8300
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2575
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 425
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3655
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1092
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 640
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9338
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7453
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1698
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 292
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6062
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4778
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24361
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3596
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13024
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3946
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512127260630255e-5
allele num: 66132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.67e-1

QD
type: SiteQuality
SIO_000300: 1.554e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 2.715e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 2.495535e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeDepth
all individuals: 8301
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3558
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 389
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 640
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2574
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3655
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9256
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 430
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4779
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6062
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9335
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1092
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7453
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3596
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5720
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3946
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24362
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2648
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512127260630255e-5
allele num: 66132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

FS
type: SiteQuality
SIO_000300: 6.395e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.67e-1

QD
type: SiteQuality
SIO_000300: 1.336e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.91e0

DP
type: SiteQuality
SIO_000300: 2.495437e6

GenotypeDepth
all individuals: 8300
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 99
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6063
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9264
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1698
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 639
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3655
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1092
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 362
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3589
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2574
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 398
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7452
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9340
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 293
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13067
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3946
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2149
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3596
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24362
bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.536793394428818e-5
allele num: 66126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

FS
type: SiteQuality
SIO_000300: 3.305e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

DP
type: SiteQuality
SIO_000300: 2.496e6

VQSLOD
type: SiteQuality
SIO_000300: 9.320000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.503e1

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

GenotypeDepth
all individuals: 3576
bin: 2.25e1
variant carriers: 4

GenotypeDepth
all individuals: 353
bin: 1.25e1
variant carriers: 5

GenotypeDepth
all individuals: 3631
bin: 5.75e1
variant carriers: 9

GenotypeDepth
all individuals: 527
bin: 9.75e1
variant carriers: 259

GenotypeDepth
all individuals: 117
bin: 1.75e1
variant carriers: 3

GenotypeDepth
all individuals: 8240
bin: 3.75e1
variant carriers: 3

GenotypeDepth
all individuals: 9248
bin: 2.75e1
variant carriers: 3

GenotypeDepth
all individuals: 241
bin: 8.75e1
variant carriers: 35

GenotypeDepth
all individuals: 93
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1101
bin: 7.25e1
variant carriers: 28

GenotypeDepth
all individuals: 4742
bin: 5.25e1
variant carriers: 11

GenotypeDepth
all individuals: 6001
bin: 4.75e1
variant carriers: 3

GenotypeDepth
all individuals: 1696
bin: 6.75e1
variant carriers: 26

GenotypeDepth
all individuals: 150
bin: 9.25e1
variant carriers: 34

GenotypeDepth
all individuals: 663
bin: 7.75e1
variant carriers: 34

GenotypeDepth
all individuals: 2566
bin: 6.25e1
variant carriers: 19

GenotypeDepth
all individuals: 422
bin: 8.25e1
variant carriers: 31

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2134
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3923
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5703
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13063
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3897
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 24489
bin: 9.75e1
variant carriers: 511

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.131221719457014e-3
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 22
allele frequency: 1.333333333333333e-3
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732501732501733e-4
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 504
allele frequency: 5.918271488961954e-2
allele num: 8516
num of homozygotes: 18

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.02416306287235e-5
allele num: 66134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

FS
type: SiteQuality
SIO_000300: 1.344e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.31e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

DP
type: SiteQuality
SIO_000300: 2.52214e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.372e1

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

GenotypeDepth
all individuals: 3649
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7465
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 422
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 273
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 3585
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8309
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4782
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9372
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6050
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2562
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3614
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24181
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5762
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3934
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13132
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.023980162690133e-5
allele num: 66138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.93e-2

FS
type: SiteQuality
SIO_000300: 9.544e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

QD
type: SiteQuality
SIO_000300: 1.062e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.27e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.011e0

DP
type: SiteQuality
SIO_000300: 2.492777e6

GenotypeDepth
all individuals: 4782
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2561
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3649
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 93
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7465
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 8309
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3593
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9323
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9374
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 416
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6051
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13178
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3934
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3615
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2663
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24180
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5753
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3966
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511578692786746e-5
allele num: 66156
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 1.376e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.628e0

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

QD
type: SiteQuality
SIO_000300: 1.067e1

VQSLOD
type: SiteQuality
SIO_000300: 7.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
SIO_000300: 5.934e1

DP
type: SiteQuality
SIO_000300: 2.492975e6

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9381
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3602
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9324
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 327
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1075
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3648
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 411
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8311
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7464
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6052
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 4782
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2561
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5751
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3618
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13194
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3968
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2664
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3936
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24180
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.525264394829612e-4
allele num: 8510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66172
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

DP
type: SiteQuality
SIO_000300: 2.493374e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 3.921e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e0

QD
type: SiteQuality
SIO_000300: 1.555e1

MQ
type: SiteQuality
SIO_000300: 5.955e1

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9328
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7465
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9386
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6051
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3647
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3582
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4784
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8310
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 451
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 307
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 81
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 98
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2561
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 108
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5748
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13205
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3957
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3614
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24178
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3942
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66114
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.178689297501179e-4
allele num: 8484
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.249e1

VQSLOD
type: SiteQuality
SIO_000300: -1.868e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 1.192e0

MQ
type: SiteQuality
SIO_000300: 5.833e1

DP
type: SiteQuality
SIO_000300: 2.492853e6

GenotypeDepth
all individuals: 467
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9383
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 328
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 118
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3538
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 637
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6051
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4785
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2561
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8310
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3647
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9314
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7465
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2651
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24179
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3955
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3614
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5751
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3940
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512813530604218e-5
allele num: 66102
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.708e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

FS
type: SiteQuality
SIO_000300: 4.84e0

MQRankSum
type: SiteQuality
SIO_000300: -3.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.376e0

DP
type: SiteQuality
SIO_000300: 2.492055e6

QD
type: SiteQuality
SIO_000300: 1.037e1

GenotypeDepth
all individuals: 7465
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9318
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3533
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3647
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8307
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6052
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9382
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4785
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 469
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 334
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2560
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 111
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 273
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2648
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5749
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3940
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24178
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3956
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3614
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.026268006294638e-5
allele num: 66088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.821e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.87e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 1.257e1

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

FS
type: SiteQuality
SIO_000300: 5.027e0

DP
type: SiteQuality
SIO_000300: 2.49214e6

VQSLOD
type: SiteQuality
SIO_000300: 9.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

GenotypeDepth
all individuals: 4783
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3647
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 497
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6052
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 127
bin: 1.75e1
variant carriers: 2

GenotypeDepth
all individuals: 7464
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3490
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8307
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9309
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 355
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2560
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9371
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3932
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24176
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5734
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3957
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13074
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3615
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.069108214359611e-4
allele num: 9666
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514004542013626e-5
allele num: 66050
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-2

FS
type: SiteQuality
SIO_000300: 5.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.236e1

DP
type: SiteQuality
SIO_000300: 2.491084e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.06e-1

GenotypeDepth
all individuals: 9369
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7464
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 148
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 101
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4783
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3430
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8304
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9279
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 530
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2560
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3647
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 389
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6052
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24174
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3954
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12969
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5722
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3615
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3931
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515335192144502e-5
allele num: 65992
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

FS
type: SiteQuality
SIO_000300: 7.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.16e-1

DP
type: SiteQuality
SIO_000300: 2.489789e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.737e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-2

QD
type: SiteQuality
SIO_000300: 1.446e1

GenotypeDepth
all individuals: 3647
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3429
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 534
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6051
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 385
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2560
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7464
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 102
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9368
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8305
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9282
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4781
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3931
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24174
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12991
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3953
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2642
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3615
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515381118351265e-5
allele num: 65990
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.363507445048452e-4
allele num: 8462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.799e0

FS
type: SiteQuality
SIO_000300: 4.052e0

DP
type: SiteQuality
SIO_000300: 2.490056e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.98e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.65e-1

GenotypeDepth
all individuals: 404
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2561
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1077
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 145
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 541
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3420
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9267
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7463
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3647
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9368
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8306
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6051
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4782
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3929
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12965
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24173
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5719
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3951
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3615
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65986
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9654
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514233797698365e-4
allele num: 6604
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.016e0

FS
type: SiteQuality
SIO_000300: 1.994e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.093e0

QD
type: SiteQuality
SIO_000300: 1.213e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

DP
type: SiteQuality
SIO_000300: 2.489343e6

VQSLOD
type: SiteQuality
SIO_000300: -1.687e-1

GenotypeDepth
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4783
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9362
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9240
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3647
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7462
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8309
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3390
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 566
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 425
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6050
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 107
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2561
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5710
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12849
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24169
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3930
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3949
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3613
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2635
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516438189979376e-5
allele num: 65944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.169e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: -4.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

DP
type: SiteQuality
SIO_000300: 2.488411e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.113e0

FS
type: SiteQuality
SIO_000300: 7.86e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

GenotypeDepth
all individuals: 2561
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8293
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 609
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9210
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9339
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6048
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 486
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3647
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7464
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4781
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3327
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3928
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3612
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5669
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24168
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 809
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2616
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3941
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12692
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.821714840903571e-4
allele num: 16468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65866
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

FS
type: SiteQuality
SIO_000300: 3.913e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

QD
type: SiteQuality
SIO_000300: 1.163e1

DP
type: SiteQuality
SIO_000300: 2.486274e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.751e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.65e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeDepth
all individuals: 395
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 182
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3647
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 618
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 117
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8282
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4782
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 511
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9325
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9209
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6044
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3314
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1683
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7461
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2561
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5663
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3932
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3608
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24162
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2615
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12710
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.184553423359394e-4
allele num: 8442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65850
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.903e1

MQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

QD
type: SiteQuality
SIO_000300: 1.364e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.267e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.713e0

FS
type: SiteQuality
SIO_000300: 9.227e0

DP
type: SiteQuality
SIO_000300: 2.48527e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.18e-1

GenotypeDepth
all individuals: 9176
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 562
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9247
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 128
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8275
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6052
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1079
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2564
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 638
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3269
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4790
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 676
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7455
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3649
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1684
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 273
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12628
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 24142
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 904
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3602
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3906
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3912
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2598
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5596
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.045252451428223e-5
allele num: 65676
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 6.14e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.24e-1

DP
type: SiteQuality
SIO_000300: 2.483775e6

FS
type: SiteQuality
SIO_000300: 5.91e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

GenotypeDepth
all individuals: 1079
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9247
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 562
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6052
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1684
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9176
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7455
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 128
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8275
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3649
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2564
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 638
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 676
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4790
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 397
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3269
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 273
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 119
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3912
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3906
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5596
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2598
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3602
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 904
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2143
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24142
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12628
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.567878677142335e-5
allele num: 65676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.090133982947625e-5
allele num: 16420
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 5.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

QD
type: SiteQuality
SIO_000300: 6.14e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.24e-1

DP
type: SiteQuality
SIO_000300: 2.483775e6

GenotypeDepth
all individuals: 9192
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6034
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 638
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2557
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8238
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3338
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 724
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3639
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 288
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 596
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4774
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9192
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7428
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3906
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2597
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5587
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12793
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24152
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.101281269066504e-5
allele num: 16390
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

FS
type: SiteQuality
SIO_000300: 3.519e0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

QD
type: SiteQuality
SIO_000300: 1.267e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.303e0

DP
type: SiteQuality
SIO_000300: 2.481111e6

GenotypeDepth
all individuals: 141
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 724
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7428
bin: 4.25e1
variant carriers: 4

GenotypeDepth
all individuals: 4774
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9192
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 596
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2557
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 3338
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6034
bin: 4.75e1
variant carriers: 3

GenotypeDepth
all individuals: 8238
bin: 3.75e1
variant carriers: 4

GenotypeDepth
all individuals: 3639
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 396
bin: 8.25e1
variant carriers: 2

GenotypeDepth
all individuals: 288
bin: 9.75e1
variant carriers: 19

GenotypeDepth
all individuals: 9192
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 638
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5587
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3906
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2597
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12793
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24152
bin: 9.75e1
variant carriers: 41

GenotypeQuality
all individuals: 151
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 5.781929947354007e-4
allele num: 65722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.545454545454545e-4
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9618
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

QD
type: SiteQuality
SIO_000300: 1.267e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

FS
type: SiteQuality
SIO_000300: 3.519e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.303e0

DP
type: SiteQuality
SIO_000300: 2.481111e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9160
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2558
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 270
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8241
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 151
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 750
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9168
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7427
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3343
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3639
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6033
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4775
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12758
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5590
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1013
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24118
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3907
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2600
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3908
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.187084520417854e-4
allele num: 8424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 7.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.821e0

QD
type: SiteQuality
SIO_000300: 2.543e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.491e0

MQRankSum
type: SiteQuality
SIO_000300: 5.26e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

DP
type: SiteQuality
SIO_000300: 2.477315e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeDepth
all individuals: 3346
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8230
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7425
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8999
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 203
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3639
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 761
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9113
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6033
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2559
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4774
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 835
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 269
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5559
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12566
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3598
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1209
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3901
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3908
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24115
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524390243902439e-5
allele num: 65600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.396e0

VQSLOD
type: SiteQuality
SIO_000300: -1.083e0

MQRankSum
type: SiteQuality
SIO_000300: -7.92e-1

QD
type: SiteQuality
SIO_000300: 1.851e1

DP
type: SiteQuality
SIO_000300: 2.472873e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.124e0

GenotypeDepth
all individuals: 192
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1134
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1021
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 270
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4774
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6030
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8965
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8213
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3639
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8705
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3204
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 237
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7419
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2557
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12105
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2129
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3867
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5432
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3590
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2548
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24109
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1684
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528023959415684e-5
allele num: 65444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

FS
type: SiteQuality
SIO_000300: 8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.462395e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.856e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.992e1

QD
type: SiteQuality
SIO_000300: 1.295e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.17e-1

GenotypeDepth
all individuals: 1289
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3639
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 269
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6028
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4773
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8185
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8785
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2557
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2917
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 377
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1751
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8147
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7414
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11323
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2377
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5285
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3589
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24106
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3839
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3873
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533460099368214e-5
allele num: 65212
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.928e1

MQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

QD
type: SiteQuality
SIO_000300: 1.192e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 3.642e0

DP
type: SiteQuality
SIO_000300: 2.445642e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.62e-1

GenotypeDepth
all individuals: 2391
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7410
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8510
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 610
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7528
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6029
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3638
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2702
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 296
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 121
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1077
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1492
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3824
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24106
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10309
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5077
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3865
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537941004583064e-5
allele num: 65022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

DP
type: SiteQuality
SIO_000300: 2.427874e6

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

FS
type: SiteQuality
SIO_000300: 1.376e0

QD
type: SiteQuality
SIO_000300: 1.232e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.038e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeDepth
all individuals: 1077
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 121
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 296
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8510
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2556
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7528
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8165
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6029
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2391
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1492
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 3638
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 610
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7410
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24106
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3865
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3824
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10309
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5077
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537941004583064e-5
allele num: 65022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.549590536851683e-4
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.376e0

DP
type: SiteQuality
SIO_000300: 2.427874e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.038e0

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

QD
type: SiteQuality
SIO_000300: 1.232e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.37e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8449
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2468
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 269
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3638
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7449
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6029
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1539
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 614
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7408
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8161
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4774
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10334
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24104
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5080
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3822
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3862
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3114
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3587
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.047120418848168e-4
allele num: 9550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65012
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.92e-1

QD
type: SiteQuality
SIO_000300: 8.859999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

FS
type: SiteQuality
SIO_000300: 4.752e0

DP
type: SiteQuality
SIO_000300: 2.424906e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.876e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6719
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 425
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3211
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 270
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3638
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4774
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1707
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7406
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2363
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8264
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6030
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2556
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24100
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4953
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2457
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3859
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3586
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9186
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2122
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3809
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3638
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14950
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543400419804914e-5
allele num: 64792
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.14e1

DP
type: SiteQuality
SIO_000300: 2.405601e6

VQSLOD
type: SiteQuality
SIO_000300: 5.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.401e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

FS
type: SiteQuality
SIO_000300: 7.184e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-2

GenotypeDepth
all individuals: 2556
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8083
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1542
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7956
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3743
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7385
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1860
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4774
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3637
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 676
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 269
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6020
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1076
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3585
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7660
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4637
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3874
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3777
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24099
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3846
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2117
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.037297677691766e-5
allele num: 14210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

VQSLOD
type: SiteQuality
SIO_000300: 5.639999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.376896e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

QD
type: SiteQuality
SIO_000300: 1.181e1

GenotypeDepth
all individuals: 3661
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1077
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 720
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2235
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1825
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7379
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8040
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5604
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1868
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4772
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2557
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7778
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 269
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3768
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24096
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3846
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2406
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3791
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7275
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3580
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.729050279329609e-5
allele num: 11456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.676976802195061e-5
allele num: 64144
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.36919e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e0

QD
type: SiteQuality
SIO_000300: 1.359e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.068e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

FS
type: SiteQuality
SIO_000300: 2.049e0

VQSLOD
type: SiteQuality
SIO_000300: 9.01e-1

GenotypeDepth
all individuals: 4773
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2559
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7750
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5618
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 723
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2254
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3690
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7376
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8034
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6016
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 269
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3636
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3845
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3854
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2400
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4559
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3578
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7346
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24095
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3763
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.195314367678699e-4
allele num: 8366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559478510386127e-5
allele num: 64124
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13910
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.368203e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

QD
type: SiteQuality
SIO_000300: 1.131e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.838e0

FS
type: SiteQuality
SIO_000300: 3.282e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e0

VQSLOD
type: SiteQuality
SIO_000300: -2.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 3277
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4840
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6007
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 765
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4768
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2558
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2736
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3635
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2424
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7835
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 269
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3788
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3947
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3264
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 806
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3569
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5623
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3624
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2227
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24089
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 427
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.621951219512195e-5
allele num: 13120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.144060869018425e-5
allele num: 63612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 2.343457e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.055e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.91e0

QD
type: SiteQuality
SIO_000300: 1.105e1

GenotypeDepth
all individuals: 4765
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3634
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3038
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7288
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2970
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6833
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6003
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 771
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2557
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3199
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4845
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1076
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7759
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2190
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2905
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3782
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4627
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3567
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3687
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24086
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3600
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.577834579822651e-5
allele num: 63378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.032e0

QD
type: SiteQuality
SIO_000300: 1.497e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.841e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.0e0

DP
type: SiteQuality
SIO_000300: 2.338316e6

VQSLOD
type: SiteQuality
SIO_000300: -2.695e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.244e0

GenotypeDepth
all individuals: 7262
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3635
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2994
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4761
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 767
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2436
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6003
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3205
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3097
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1075
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2556
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6786
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 269
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3537
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2101
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4411
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2803
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2083
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3533
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3717
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3511
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24039
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1302
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.581177661122004e-5
allele num: 63244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.336071e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

QD
type: SiteQuality
SIO_000300: 1.413e1

GenotypeDepth
all individuals: 269
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4922
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4763
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 766
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6857
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7280
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3225
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2376
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2557
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1075
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6009
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2966
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2975
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3026
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5179
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3770
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3610
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2167
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24088
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3561
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2099
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.717240314863405e-5
allele num: 12958
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.338935e6

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e0

QD
type: SiteQuality
SIO_000300: 1.309e1

GenotypeDepth
all individuals: 2966
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1075
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3225
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4763
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 766
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7280
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7744
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2376
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6857
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3636
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6009
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1681
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2557
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 269
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3770
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 681
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2167
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24088
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 652
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3561
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3610
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5179
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2099
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3026
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.073883161512027e-4
allele num: 9312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12958
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.87e0