12-62928603-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928603
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928603
    reference: chr 12
allele count: 3
allele frequency: 2.578870454740824e-5
allele num: 116330
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-22T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-22T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-22T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-22T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-22T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-22T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-22T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-22T>C
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1600
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8822
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29903
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2571
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8226
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

12-62928607-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928607
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928607
    reference: chr 12
allele count: 1
allele frequency: 8.428150021070375e-6
allele num: 118650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-18A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-18A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-18A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-18A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-18A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-18A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-18A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-18A>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8977
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

12-62928607-ATG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928607
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928605
    reference: chr 12
allele count: 1
allele frequency: 8.428150021070375e-6
allele num: 118650
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-16_1634-15delGT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-16_1634-15delGT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-16_1634-15delGT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-16_1634-15delGT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-16_1634-15delGT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-16_*1580-15delGT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-16_1634-15delGT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-16_1634-15delGT
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30956
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: ATG
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

12-62928608-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928608
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928607
    reference: chr 12
allele count: 1
allele frequency: 8.390810384466932e-6
allele num: 119178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-16delG
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-16delG
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-16delG
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-16delG
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-16delG
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-16delG
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-16delG
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-16delG
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4259
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2290
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31222
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: TG
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

12-62928609-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928609
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928610
    reference: chr 12
allele count: 2
allele frequency: 1.675322499581169e-5
allele num: 119380
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-9dupT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-9dupT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-9dupT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-9dupT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-9dupT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-9dupT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-9dupT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-9dupT
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26491
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

12-62928609-G-GTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928609
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928611
    reference: chr 12
allele count: 1
allele frequency: 8.376612497905846e-6
allele num: 119380
alternate allele: GTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-10_1634-9dupTT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-10_1634-9dupTT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-10_1634-9dupTT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-10_1634-9dupTT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-10_*1580-9dupTT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-10_1634-9dupTT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-10_1634-9dupTT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-10_1634-9dupTT
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8986
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8272
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2277
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

12-62928609-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928609
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928608
    reference: chr 12
allele count: 1
allele frequency: 8.376612497905846e-6
allele num: 119380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-9delT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-9delT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-9delT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-9delT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-9delT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-9delT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-9delT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-9delT
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9445
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: GT
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

12-62928612-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928612
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928612
    reference: chr 12
allele count: 1
allele frequency: 8.31766839119658e-6
allele num: 120226
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-13T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-13T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-13T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-13T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-13T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-13T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-13T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-13T>C
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26779
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7664
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2670
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

12-62928616-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928616
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928615
    reference: chr 12
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-7delC
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-7delC
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-7delC
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-7delC
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-7delC
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-7delC
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-7delC
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-7delC
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2974
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31865
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1634-7delC
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: TC
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

12-62928620-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928620
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928620
    reference: chr 12
allele count: 27
allele frequency: 2.231368076560718e-4
allele num: 121002
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-5T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-5T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-5T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-5T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-5T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-5T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-5T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-5T>C
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27086
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4345
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3309
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: c.1634-5T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

12-62928621-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928621
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928621
    reference: chr 12
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-4T>C
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27108
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2983
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1042
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9167
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1634-4T>C
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

12-62928622-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928622
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928622
    reference: chr 12
allele count: 27
allele frequency: 2.230483271375465e-4
allele num: 121050
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-3A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-3A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-3A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-3A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-3A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-3A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-3A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-3A>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 9454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1040
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2678
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 2
hgvs: c.1634-3A>T
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

12-62928623-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928623
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928623
    reference: chr 12
allele count: 2
allele frequency: 1.651145895251304e-5
allele num: 121128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1634-2A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1580-2A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1634-2A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1634-2A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1634-2A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1634-2A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1634-2A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1634-2A>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2353
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9166
  bin: 6.75e1
  variant carriers: 0
hgvs: c.1634-2A>T
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

12-62928627-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928627
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928627
    reference: chr 12
allele count: 1
allele frequency: 8.248647221855616e-6
allele num: 121232
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1636A>G
  hgvsp: ENSP00000377250.3:p.Ser546Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1582A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1636A>G
  hgvsp: ENSP00000377252.2:p.Ser546Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1636A>G
  hgvsp: ENSP00000449215.1:p.Ser546Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1636A>G
  hgvsp: ENSP00000377249.2:p.Ser546Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1636A>G
  hgvsp: ENSP00000447407.1:p.Ser546Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1636A>G
  hgvsp: ENSP00000280379.6:p.Ser546Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1636A>G
  hgvsp: ENSP00000446635.1:p.Ser546Gly
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser546Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: A
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

12-62928633-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928633
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928633
    reference: chr 12
allele count: 41768
allele frequency: 3.441888061177401e-1
allele num: 121352
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1642G>A
  hgvsp: ENSP00000446635.1:p.Ala548Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1642G>A
  hgvsp: ENSP00000449215.1:p.Ala548Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1642G>A
  hgvsp: ENSP00000280379.6:p.Ala548Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1588G>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1642G>A
  hgvsp: ENSP00000377249.2:p.Ala548Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1642G>A
  hgvsp: ENSP00000377252.2:p.Ala548Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1642G>A
  hgvsp: ENSP00000377250.3:p.Ala548Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1642G>A
  hgvsp: ENSP00000447407.1:p.Ala548Thr
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 6.25e1
  variant carriers: 1021
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 5.25e1
  variant carriers: 632
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 8.75e1
  variant carriers: 1884
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 2.75e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 8.25e1
  variant carriers: 1802
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 5.75e1
  variant carriers: 799
genotype depth: GenotypeDepth
  all individuals: 11082
  bin: 2.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.25e1
  variant carriers: 338
genotype depth: GenotypeDepth
  all individuals: 1814
  bin: 7.75e1
  variant carriers: 1673
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 7.25e1
  variant carriers: 1435
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 3.25e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 20877
  bin: 9.75e1
  variant carriers: 20365
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 6.75e1
  variant carriers: 1204
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 4.75e1
  variant carriers: 499
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 9.25e1
  variant carriers: 2072
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 7.75e1
  variant carriers: 18
hgvs: p.Ala548Thr
num of homozygotes: 7357
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

12-62928639-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928639
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928639
    reference: chr 12
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1648T>A
  hgvsp: ENSP00000377250.3:p.Trp550Arg
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1648T>A
  hgvsp: ENSP00000377249.2:p.Trp550Arg
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1648T>A
  hgvsp: ENSP00000447407.1:p.Trp550Arg
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1648T>A
  hgvsp: ENSP00000449215.1:p.Trp550Arg
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1648T>A
  hgvsp: ENSP00000446635.1:p.Trp550Arg
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1648T>A
  hgvsp: ENSP00000280379.6:p.Trp550Arg
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1648T>A
  hgvsp: ENSP00000377252.2:p.Trp550Arg
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1594T>A
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Trp550Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

12-62928650-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928650
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928650
    reference: chr 12
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1659G>A
  hgvsp: ENSP00000449215.1:p.Met553Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1659G>A
  hgvsp: ENSP00000377249.2:p.Met553Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1659G>A
  hgvsp: ENSP00000377250.3:p.Met553Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1659G>A
  hgvsp: ENSP00000446635.1:p.Met553Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1659G>A
  hgvsp: ENSP00000447407.1:p.Met553Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1659G>A
  hgvsp: ENSP00000280379.6:p.Met553Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1659G>A
  hgvsp: ENSP00000377252.2:p.Met553Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1605G>A
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11073
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Met553Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

12-62928662-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928662
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928662
    reference: chr 12
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1671C>T
  hgvsp: ENST00000280379.6:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1671C>T
  hgvsp: ENST00000552115.1:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1671C>T
  hgvsp: ENST00000546600.1:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1671C>T
  hgvsp: ENST00000393629.2:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1671C>T
  hgvsp: ENST00000393632.2:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1671C>T
  hgvsp: ENST00000552738.1:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1671C>T
  hgvsp: ENST00000393630.3:c.1671C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1617C>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36346
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Cys557Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

12-62928670-GTCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928670
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928667
    reference: chr 12
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1684_1686delCTT
  hgvsp: ENSP00000377250.3:p.Leu562del
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1684_1686delCTT
  hgvsp: ENSP00000280379.6:p.Leu562del
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1630_*1632delCTT
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1684_1686delCTT
  hgvsp: ENSP00000377249.2:p.Leu562del
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1684_1686delCTT
  hgvsp: ENSP00000377252.2:p.Leu562del
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1684_1686delCTT
  hgvsp: ENSP00000447407.1:p.Leu562del
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1684_1686delCTT
  hgvsp: ENSP00000446635.1:p.Leu562del
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1684_1686delCTT
  hgvsp: ENSP00000449215.1:p.Leu562del
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3503
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu562del
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: GTCT
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

12-62928676-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928676
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928676
    reference: chr 12
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1685T>C
  hgvsp: ENSP00000280379.6:p.Leu562Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1631T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1685T>C
  hgvsp: ENSP00000446635.1:p.Leu562Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1685T>C
  hgvsp: ENSP00000377249.2:p.Leu562Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1685T>C
  hgvsp: ENSP00000447407.1:p.Leu562Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1685T>C
  hgvsp: ENSP00000377250.3:p.Leu562Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1685T>C
  hgvsp: ENSP00000449215.1:p.Leu562Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1685T>C
  hgvsp: ENSP00000377252.2:p.Leu562Pro
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36358
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu562Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ

12-62928680-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928680
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928680
    reference: chr 12
allele count: 4
allele frequency: 3.295001482750667e-5
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1689T>C
  hgvsp: ENST00000393632.2:c.1689T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1689T>C
  hgvsp: ENST00000552115.1:c.1689T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1689T>C
  hgvsp: ENST00000280379.6:c.1689T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1689T>C
  hgvsp: ENST00000552738.1:c.1689T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1689T>C
  hgvsp: ENST00000393630.3:c.1689T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1689T>C
  hgvsp: ENST00000546600.1:c.1689T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1689T>C
  hgvsp: ENST00000393629.2:c.1689T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1635T>C
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11071
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3504
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala563Ala
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD

12-62928686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928686
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928686
    reference: chr 12
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1695C>T
  hgvsp: ENST00000280379.6:c.1695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1695C>T
  hgvsp: ENST00000552115.1:c.1695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1695C>T
  hgvsp: ENST00000393630.3:c.1695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1695C>T
  hgvsp: ENST00000546600.1:c.1695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1695C>T
  hgvsp: ENST00000552738.1:c.1695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1695C>T
  hgvsp: ENST00000393629.2:c.1695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1695C>T
  hgvsp: ENST00000393632.2:c.1695C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1641C>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3501
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu565Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD

12-62928690-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928690
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928690
    reference: chr 12
allele count: 2
allele frequency: 1.647500741375333e-5
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1699C>T
  hgvsp: ENSP00000280379.6:p.Leu567Phe
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1699C>T
  hgvsp: ENSP00000377250.3:p.Leu567Phe
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1699C>T
  hgvsp: ENSP00000447407.1:p.Leu567Phe
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1645C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1699C>T
  hgvsp: ENSP00000449215.1:p.Leu567Phe
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1699C>T
  hgvsp: ENSP00000377252.2:p.Leu567Phe
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1699C>T
  hgvsp: ENSP00000446635.1:p.Leu567Phe
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1699C>T
  hgvsp: ENSP00000377249.2:p.Leu567Phe
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11057
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6249
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu567Phe
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

12-62928703-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928703
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928703
    reference: chr 12
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1712C>T
  hgvsp: ENSP00000377249.2:p.Ala571Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1712C>T
  hgvsp: ENSP00000446635.1:p.Ala571Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1658C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1712C>T
  hgvsp: ENSP00000447407.1:p.Ala571Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1712C>T
  hgvsp: ENSP00000449215.1:p.Ala571Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1712C>T
  hgvsp: ENSP00000377250.3:p.Ala571Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1712C>T
  hgvsp: ENSP00000280379.6:p.Ala571Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1712C>T
  hgvsp: ENSP00000377252.2:p.Ala571Val
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala571Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ

12-62928720-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928720
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928720
    reference: chr 12
allele count: 2
allele frequency: 1.647582173160887e-5
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1715+14G>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1661+14G>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1715+14G>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1715+14G>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1715+14G>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1715+14G>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1715+14G>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1715+14G>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3510
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

12-62928729-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928729
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928729
    reference: chr 12
allele count: 2
allele frequency: 1.648206751054852e-5
allele num: 121344
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1715+23A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1715+23A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1715+23A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1715+23A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1715+23A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1715+23A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1715+23A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1661+23A>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3481
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

12-62928735-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928735
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928735
    reference: chr 12
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1715+29A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1715+29A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1661+29A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1715+29A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1715+29A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1715+29A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1715+29A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1715+29A>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30351
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

12-62928735-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928735
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928735
    reference: chr 12
allele count: 1
allele frequency: 8.255047961828658e-6
allele num: 121138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1715+29A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1715+29A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1715+29A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1715+29A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1715+29A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1715+29A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1661+29A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1715+29A>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6250
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3180
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4650
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9492
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30351
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

12-62928739-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928739
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928739
    reference: chr 12
allele count: 174
allele frequency: 1.457677099390121e-3
allele num: 119368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1715+33G>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1715+33G>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1715+33G>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1715+33G>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1715+33G>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1715+33G>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1661+33G>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1715+33G>A
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4962
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6292
  bin: 9.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 2476
  bin: 7.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 1152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 4
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/12-62928744-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928744
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928744
    reference: chr 12
allele count: 1
allele frequency: 6.172839506172839e-3
allele num: 162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1715+38A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1715+38A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1715+38A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1715+38A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1661+38A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1715+38A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1715+38A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1715+38A>C
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

12-62928747-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928747
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928746
    reference: chr 12
allele count: 121154
allele frequency: 9.993566055166953e-1
allele num: 121232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1715+49delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1715+49delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1715+49delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1715+49delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1715+49delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1715+49delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1715+49delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1661+49delA
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 1.75e1
  variant carriers: 798
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 6.75e1
  variant carriers: 2304
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 4.25e1
  variant carriers: 7660
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 2.25e1
  variant carriers: 1854
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 8.75e1
  variant carriers: 715
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 5.25e1
  variant carriers: 6093
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3580
  bin: 2.75e1
  variant carriers: 3580
genotype depth: GenotypeDepth
  all individuals: 7276
  bin: 4.75e1
  variant carriers: 7276
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 7.25e1
  variant carriers: 1604
genotype depth: GenotypeDepth
  all individuals: 4545
  bin: 5.75e1
  variant carriers: 4545
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 8.25e1
  variant carriers: 879
genotype depth: GenotypeDepth
  all individuals: 5645
  bin: 3.25e1
  variant carriers: 5645
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.25e1
  variant carriers: 293
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 9.25e1
  variant carriers: 553
genotype depth: GenotypeDepth
  all individuals: 5133
  bin: 9.75e1
  variant carriers: 5133
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 7.75e1
  variant carriers: 1220
genotype depth: GenotypeDepth
  all individuals: 7132
  bin: 3.75e1
  variant carriers: 7132
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 6.25e1
  variant carriers: 3339
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 6.25e1
  variant carriers: 491
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 8.75e1
  variant carriers: 1702
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 5.25e1
  variant carriers: 171
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 27
num of homozygotes: 60538
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: TA
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

12-62928748-A-AAAAAAACTGTGTCAGTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928748
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928765
    reference: chr 12
allele count: 23
allele frequency: 6.647398843930635e-2
allele num: 346
alternate allele: AAAAAAACTGTGTCAGTT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 9.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 2.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 14
num of homozygotes: 10
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

12-62928750-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928750
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928750
    reference: chr 12
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1715+44A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1715+44A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1715+44A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1715+44A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1715+44A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1715+44A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1661+44A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1715+44A>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4634
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5341
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3383
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3330
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD

12-62928755-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62928755
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62928755
    reference: chr 12
allele count: 1
allele frequency: 8.336390009670212e-6
allele num: 119956
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1715+49A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1715+49A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1715+49A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1715+49A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1715+49A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1661+49A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1715+49A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1715+49A>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5329
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1909
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2617
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3316
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ

12-62929254-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929254
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929254
    reference: chr 12
allele count: 1
allele frequency: 1.059928348843618e-5
allele num: 94346
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-51A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-51A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-51A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-51A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-51A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-51A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-51A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-51A>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10535
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4501
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2667
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4189
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3999
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS

12-62929255-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929255
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929255
    reference: chr 12
allele count: 2
allele frequency: 2.118285036434503e-5
allele num: 94416
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-50A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-50A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-50A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-50A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-50A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-50A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-50A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-50A>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11336
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10370
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2655
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4188
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2571
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1740
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

12-62929267-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929267
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929267
    reference: chr 12
allele count: 2
allele frequency: 2.097491400285259e-5
allele num: 95352
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-38A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-38A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-38A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-38A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-38A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-38A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-38A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-38A>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20178
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3701
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18255
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1828
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2745
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4223
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP

12-62929273-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929273
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929273
    reference: chr 12
allele count: 1
allele frequency: 1.031778786628147e-5
allele num: 96920
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-32T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-32T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-32T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-32T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-32T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-32T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-32T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-32T>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6018
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10679
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21784
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2062
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/12-62929275-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929275
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929275
    reference: chr 12
allele count: 1
allele frequency: 1.023206319322228e-5
allele num: 97732
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-30A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-30A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-30A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-30A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-30A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-30A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-30A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-30A>C
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4103
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4257
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

12-62929276-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929276
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929276
    reference: chr 12
allele count: 1
allele frequency: 1.017770268894905e-5
allele num: 98254
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-29T>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-29T>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-29T>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-29T>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-29T>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-29T>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-29T>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-29T>A
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4260
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

12-62929277-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929277
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929277
    reference: chr 12
allele count: 6
allele frequency: 6.069802731411229e-5
allele num: 98850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-28C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-28C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-28C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-28C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-28C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-28C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-28C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-28C>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8956
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4215
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26569
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24754
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

12-62929286-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929286
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929285
    reference: chr 12
allele count: 6
allele frequency: 5.678914191606565e-5
allele num: 105654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-15delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-15delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-15delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-15delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-15delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-15delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-15delA
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-15delA
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4582
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31119
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9699
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7372
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: TA
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

12-62929295-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929295
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929295
    reference: chr 12
allele count: 0
allele frequency: 0.0e0
allele num: 111598
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-10T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-10T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-10T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-10T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-10T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-10T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-10T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-10T>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 10132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34468
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4679
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4790
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3365
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP

12-62929296-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929296
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929296
    reference: chr 12
allele count: 9
allele frequency: 8.015104018238815e-5
allele num: 112288
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-9T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-9T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-9T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-9T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-9T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-9T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-9T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-9T>C
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4805
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10165
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD

12-62929301-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929301
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929301
    reference: chr 12
allele count: 7
allele frequency: 6.057459328487366e-5
allele num: 115560
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1716-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1716-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1716-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1716-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1716-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1662-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1716-4T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1716-4T>C
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10373
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3419
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 7.25e1
  variant carriers: 0
hgvs: c.1716-4T>C
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

12-62929311-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929311
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929311
    reference: chr 12
allele count: 1
allele frequency: 8.403926314374075e-6
allele num: 118992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1722T>A
  hgvsp: ENSP00000449215.1:p.Asp574Glu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1722T>A
  hgvsp: ENSP00000280379.6:p.Asp574Glu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1722T>A
  hgvsp: ENSP00000447407.1:p.Asp574Glu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1722T>A
  hgvsp: ENSP00000377250.3:p.Asp574Glu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1722T>A
  hgvsp: ENSP00000446635.1:p.Asp574Glu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1722T>A
  hgvsp: ENSP00000377252.2:p.Asp574Glu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1722T>A
  hgvsp: ENSP00000377249.2:p.Asp574Glu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1668T>A
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5045
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7138
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp574Glu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

12-62929315-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929315
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929315
    reference: chr 12
allele count: 3
allele frequency: 2.511679308785854e-5
allele num: 119442
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1726G>C
  hgvsp: ENSP00000447407.1:p.Ala576Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1726G>C
  hgvsp: ENSP00000377250.3:p.Ala576Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1672G>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1726G>C
  hgvsp: ENSP00000377252.2:p.Ala576Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1726G>C
  hgvsp: ENSP00000449215.1:p.Ala576Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1726G>C
  hgvsp: ENSP00000377249.2:p.Ala576Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1726G>C
  hgvsp: ENSP00000446635.1:p.Ala576Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1726G>C
  hgvsp: ENSP00000280379.6:p.Ala576Pro
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11069
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36889
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4339
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Ala576Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

12-62929340-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929340
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929340
    reference: chr 12
allele count: 1
allele frequency: 8.257774694875225e-6
allele num: 121098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1751C>T
  hgvsp: ENSP00000447407.1:p.Ala584Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1697C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1751C>T
  hgvsp: ENSP00000377250.3:p.Ala584Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1751C>T
  hgvsp: ENSP00000449215.1:p.Ala584Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1751C>T
  hgvsp: ENSP00000446635.1:p.Ala584Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1751C>T
  hgvsp: ENSP00000377252.2:p.Ala584Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1751C>T
  hgvsp: ENSP00000377249.2:p.Ala584Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1751C>T
  hgvsp: ENSP00000280379.6:p.Ala584Val
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38459
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37964
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala584Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

12-62929351-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929351
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929351
    reference: chr 12
allele count: 1
allele frequency: 8.24905548314718e-6
allele num: 121226
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1762A>G
  hgvsp: ENSP00000447407.1:p.Met588Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1708A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1762A>G
  hgvsp: ENSP00000377250.3:p.Met588Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1762A>G
  hgvsp: ENSP00000377249.2:p.Met588Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1762A>G
  hgvsp: ENSP00000446635.1:p.Met588Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1762A>G
  hgvsp: ENSP00000280379.6:p.Met588Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1762A>G
  hgvsp: ENSP00000449215.1:p.Met588Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1762A>G
  hgvsp: ENSP00000377252.2:p.Met588Val
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2393
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met588Val
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

12-62929357-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929357
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929357
    reference: chr 12
allele count: 5
allele frequency: 4.123711340206185e-5
allele num: 121250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1714G>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1768G>A
  hgvsp: ENSP00000377250.3:p.Ala590Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1768G>A
  hgvsp: ENSP00000446635.1:p.Ala590Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1768G>A
  hgvsp: ENSP00000377252.2:p.Ala590Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1768G>A
  hgvsp: ENSP00000377249.2:p.Ala590Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1768G>A
  hgvsp: ENSP00000447407.1:p.Ala590Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1768G>A
  hgvsp: ENSP00000449215.1:p.Ala590Thr
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1768G>A
  hgvsp: ENSP00000280379.6:p.Ala590Thr
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala590Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

12-62929358-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929358
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929358
    reference: chr 12
allele count: 52
allele frequency: 4.321593005667936e-4
allele num: 120326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1769C>G
  hgvsp: ENSP00000446635.1:p.Ala590Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1769C>G
  hgvsp: ENSP00000280379.6:p.Ala590Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1715C>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1769C>G
  hgvsp: ENSP00000377249.2:p.Ala590Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1769C>G
  hgvsp: ENSP00000447407.1:p.Ala590Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1769C>G
  hgvsp: ENSP00000449215.1:p.Ala590Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1769C>G
  hgvsp: ENSP00000377252.2:p.Ala590Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1769C>G
  hgvsp: ENSP00000377250.3:p.Ala590Gly
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5188
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 37915
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 2
hgvs: p.Ala590Gly
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

12-62929376-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929376
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929376
    reference: chr 12
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1787G>T
  hgvsp: ENSP00000447407.1:p.Gly596Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1787G>T
  hgvsp: ENSP00000280379.6:p.Gly596Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1787G>T
  hgvsp: ENSP00000377250.3:p.Gly596Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1787G>T
  hgvsp: ENSP00000377249.2:p.Gly596Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1787G>T
  hgvsp: ENSP00000377252.2:p.Gly596Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1787G>T
  hgvsp: ENSP00000446635.1:p.Gly596Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1787G>T
  hgvsp: ENSP00000449215.1:p.Gly596Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1733G>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly596Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

12-62929376-GCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929376
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929374
    reference: chr 12
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1788_1789delCC
  hgvsp: ENSP00000446635.1:p.Leu597CysfsTer53
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1788_1789delCC
  hgvsp: ENSP00000377250.3:p.Leu597CysfsTer53
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1734_*1735delCC
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1788_1789delCC
  hgvsp: ENSP00000280379.6:p.Leu597CysfsTer53
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1788_1789delCC
  hgvsp: ENSP00000377249.2:p.Leu597CysfsTer53
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1788_1789delCC
  hgvsp: ENSP00000377252.2:p.Leu597CysfsTer53
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1788_1789delCC
  hgvsp: ENSP00000447407.1:p.Leu597CysfsTer53
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1788_1789delCC
  hgvsp: ENSP00000449215.1:p.Leu597CysfsTer30
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37869
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3492
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu597CysfsTer53
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: GCC
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

12-62929378-C-CGGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929378
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929381
    reference: chr 12
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: CGGG
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1789_1790insGGG
  hgvsp: ENSP00000377249.2:p.Leu597delinsArgVal
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1735_*1736insGGG
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: protein_altering_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1789_1790insGGG
  hgvsp: ENSP00000377252.2:p.Leu597delinsArgVal
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1789_1790insGGG
  hgvsp: ENSP00000280379.6:p.Leu597delinsArgVal
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1789_1790insGGG
  hgvsp: ENSP00000377250.3:p.Leu597delinsArgVal
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1789_1790insGGG
  hgvsp: ENSP00000446635.1:p.Leu597delinsArgVal
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1789_1790insGGG
  hgvsp: ENSP00000447407.1:p.Leu597delinsArgVal
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1789_1790insGGG
  hgvsp: ENSP00000449215.1:p.Leu597delinsArgVal
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: protein altering
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4783
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu597delinsArgVal
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

12-62929381-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929381
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929381
    reference: chr 12
allele count: 2
allele frequency: 1.648913366091746e-5
allele num: 121292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1792G>A
  hgvsp: ENSP00000446635.1:p.Val598Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1792G>A
  hgvsp: ENSP00000447407.1:p.Val598Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1792G>A
  hgvsp: ENSP00000377252.2:p.Val598Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1792G>A
  hgvsp: ENSP00000377250.3:p.Val598Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1792G>A
  hgvsp: ENSP00000377249.2:p.Val598Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1792G>A
  hgvsp: ENSP00000449215.1:p.Val598Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1738G>A
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1792G>A
  hgvsp: ENSP00000280379.6:p.Val598Ile
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val598Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

12-62929382-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929382
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929382
    reference: chr 12
allele count: 112
allele frequency: 9.233610341643582e-4
allele num: 121296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1793T>C
  hgvsp: ENSP00000446635.1:p.Val598Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1793T>C
  hgvsp: ENSP00000377249.2:p.Val598Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1793T>C
  hgvsp: ENSP00000447407.1:p.Val598Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1793T>C
  hgvsp: ENSP00000377252.2:p.Val598Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1739T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1793T>C
  hgvsp: ENSP00000280379.6:p.Val598Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1793T>C
  hgvsp: ENSP00000377250.3:p.Val598Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1793T>C
  hgvsp: ENSP00000449215.1:p.Val598Ala
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 37887
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val598Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

12-62929389-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929389
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929389
    reference: chr 12
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1800A>G
  hgvsp: ENST00000546600.1:c.1800A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1800A>G
  hgvsp: ENST00000393632.2:c.1800A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1800A>G
  hgvsp: ENST00000552115.1:c.1800A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1746A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1800A>G
  hgvsp: ENST00000393629.2:c.1800A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1800A>G
  hgvsp: ENST00000552738.1:c.1800A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1800A>G
  hgvsp: ENST00000393630.3:c.1800A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1800A>G
  hgvsp: ENST00000280379.6:c.1800A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7220
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser600Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

12-62929394-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929394
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929394
    reference: chr 12
allele count: 3
allele frequency: 2.473043822336532e-5
allele num: 121308
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1805A>G
  hgvsp: ENSP00000377252.2:p.Asp602Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1805A>G
  hgvsp: ENSP00000447407.1:p.Asp602Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1805A>G
  hgvsp: ENSP00000280379.6:p.Asp602Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1805A>G
  hgvsp: ENSP00000446635.1:p.Asp602Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1805A>G
  hgvsp: ENSP00000449215.1:p.Asp602Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1805A>G
  hgvsp: ENSP00000377250.3:p.Asp602Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1805A>G
  hgvsp: ENSP00000377249.2:p.Asp602Gly
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1751A>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2527
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp602Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/12-62929402-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929402
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929402
    reference: chr 12
allele count: 2
allele frequency: 1.648614339647526e-5
allele num: 121314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1813A>C
  hgvsp: ENSP00000280379.6:p.Ile605Leu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1813A>C
  hgvsp: ENSP00000449215.1:p.Ile605Leu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1813A>C
  hgvsp: ENSP00000447407.1:p.Ile605Leu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1813A>C
  hgvsp: ENSP00000446635.1:p.Ile605Leu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1759A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1813A>C
  hgvsp: ENSP00000377250.3:p.Ile605Leu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1813A>C
  hgvsp: ENSP00000377249.2:p.Ile605Leu
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1813A>C
  hgvsp: ENSP00000377252.2:p.Ile605Leu
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4851
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ile605Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

12-62929402-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929402
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929402
    reference: chr 12
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1813A>G
  hgvsp: ENSP00000447407.1:p.Ile605Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1813A>G
  hgvsp: ENSP00000449215.1:p.Ile605Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1813A>G
  hgvsp: ENSP00000377250.3:p.Ile605Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1813A>G
  hgvsp: ENSP00000280379.6:p.Ile605Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1759A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1813A>G
  hgvsp: ENSP00000377249.2:p.Ile605Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1813A>G
  hgvsp: ENSP00000377252.2:p.Ile605Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1813A>G
  hgvsp: ENSP00000446635.1:p.Ile605Val
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile605Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

12-62929405-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929405
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929405
    reference: chr 12
allele count: 2
allele frequency: 1.648587160803192e-5
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1816A>T
  hgvsp: ENSP00000447407.1:p.Thr606Ser
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1816A>T
  hgvsp: ENSP00000449215.1:p.Thr606Ser
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1816A>T
  hgvsp: ENSP00000280379.6:p.Thr606Ser
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1816A>T
  hgvsp: ENSP00000446635.1:p.Thr606Ser
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1816A>T
  hgvsp: ENSP00000377250.3:p.Thr606Ser
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1816A>T
  hgvsp: ENSP00000377249.2:p.Thr606Ser
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1762A>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1816A>T
  hgvsp: ENSP00000377252.2:p.Thr606Ser
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11813
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3484
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7230
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr606Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

12-62929406-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929406
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929406
    reference: chr 12
allele count: 9
allele frequency: 7.418519922847392e-5
allele num: 121318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1763C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1817C>T
  hgvsp: ENSP00000447407.1:p.Thr606Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1817C>T
  hgvsp: ENSP00000280379.6:p.Thr606Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1817C>T
  hgvsp: ENSP00000377250.3:p.Thr606Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1817C>T
  hgvsp: ENSP00000446635.1:p.Thr606Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1817C>T
  hgvsp: ENSP00000377249.2:p.Thr606Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1817C>T
  hgvsp: ENSP00000449215.1:p.Thr606Ile
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1817C>T
  hgvsp: ENSP00000377252.2:p.Thr606Ile
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37869
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr606Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

12-62929411-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929411
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929411
    reference: chr 12
allele count: 3
allele frequency: 2.472962279082036e-5
allele num: 121312
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1822A>G
  hgvsp: ENSP00000377252.2:p.Ile608Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1822A>G
  hgvsp: ENSP00000449215.1:p.Ile608Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1822A>G
  hgvsp: ENSP00000377250.3:p.Ile608Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1822A>G
  hgvsp: ENSP00000447407.1:p.Ile608Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1822A>G
  hgvsp: ENSP00000377249.2:p.Ile608Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1822A>G
  hgvsp: ENSP00000446635.1:p.Ile608Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1822A>G
  hgvsp: ENSP00000280379.6:p.Ile608Val
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1768A>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11818
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2521
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37880
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile608Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

12-62929446-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929446
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929446
    reference: chr 12
allele count: 2
allele frequency: 1.655327672112695e-5
allele num: 120822
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1803T>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1857T>G
  hgvsp: ENST00000280379.6:c.1857T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1857T>G
  hgvsp: ENST00000393629.2:c.1857T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1857T>G
  hgvsp: ENST00000393630.3:c.1857T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1857T>G
  hgvsp: ENST00000552115.1:c.1857T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1857T>G
  hgvsp: ENST00000393632.2:c.1857T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1857T>G
  hgvsp: ENST00000546600.1:c.1857T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1831+26T>G
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2513
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3474
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Leu619Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

12-62929449-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929449
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929449
    reference: chr 12
allele count: 155
allele frequency: 1.284345895064797e-3
allele num: 120684
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1806T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1860T>C
  hgvsp: ENST00000546600.1:c.1860T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1831+29T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1860T>C
  hgvsp: ENST00000393630.3:c.1860T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1860T>C
  hgvsp: ENST00000280379.6:c.1860T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1860T>C
  hgvsp: ENST00000552115.1:c.1860T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1860T>C
  hgvsp: ENST00000393629.2:c.1860T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1860T>C
  hgvsp: ENST00000393632.2:c.1860T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 9.75e1
  variant carriers: 120
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3462
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36926
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2374
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr620Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

12-62929451-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929451
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929451
    reference: chr 12
allele count: 20
allele frequency: 1.658457303016734e-4
allele num: 120594
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1862T>C
  hgvsp: ENSP00000377252.2:p.Val621Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1831+31T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1808T>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1862T>C
  hgvsp: ENSP00000447407.1:p.Val621Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1862T>C
  hgvsp: ENSP00000280379.6:p.Val621Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1862T>C
  hgvsp: ENSP00000377250.3:p.Val621Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1862T>C
  hgvsp: ENSP00000377249.2:p.Val621Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1862T>C
  hgvsp: ENSP00000446635.1:p.Val621Ala
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4942
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7147
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val621Ala
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

12-62929452-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929452
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929452
    reference: chr 12
allele count: 1
allele frequency: 8.298617450332775e-6
allele num: 120502
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1863A>G
  hgvsp: ENST00000393632.2:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1863A>G
  hgvsp: ENST00000280379.6:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1863A>G
  hgvsp: ENST00000393629.2:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1863A>G
  hgvsp: ENST00000546600.1:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1863A>G
  hgvsp: ENST00000552115.1:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1831+32A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1809A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1863A>G
  hgvsp: ENST00000393630.3:c.1863A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36676
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val621Val
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

12-62929461-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929461
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929461
    reference: chr 12
allele count: 1
allele frequency: 8.34306691139663e-6
allele num: 119860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1818C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1872C>T
  hgvsp: ENST00000393630.3:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1872C>T
  hgvsp: ENST00000552115.1:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1872C>T
  hgvsp: ENST00000546600.1:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1872C>T
  hgvsp: ENST00000393632.2:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1872C>T
  hgvsp: ENST00000393629.2:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1872C>T
  hgvsp: ENST00000280379.6:c.1872C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1831+41C>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3460
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4931
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr624Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD

12-62929464-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929464
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929464
    reference: chr 12
allele count: 1
allele frequency: 8.362043014349267e-6
allele num: 119588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1875C>T
  hgvsp: ENST00000546600.1:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1875C>T
  hgvsp: ENST00000552115.1:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1875C>T
  hgvsp: ENST00000393632.2:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1875C>T
  hgvsp: ENST00000393629.2:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1875C>T
  hgvsp: ENST00000280379.6:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1875C>T
  hgvsp: ENST00000393630.3:c.1875C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1821C>T
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1831+44C>T
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr625Thr
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/12-62929465-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929465
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929465
    reference: chr 12
allele count: 2
allele frequency: 1.674032409267444e-5
allele num: 119472
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1822A>C
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1876A>C
  hgvsp: ENSP00000377249.2:p.Thr626Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1876A>C
  hgvsp: ENSP00000377250.3:p.Thr626Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1876A>C
  hgvsp: ENSP00000280379.6:p.Thr626Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1876A>C
  hgvsp: ENSP00000447407.1:p.Thr626Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1876A>C
  hgvsp: ENSP00000377252.2:p.Thr626Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1876A>C
  hgvsp: ENSP00000446635.1:p.Thr626Pro
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1831+45A>C
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr626Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

12-62929474-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 62929474
    reference: chr 12
  end: Position
    type: ExactPosition
    position: 62929474
    reference: chr 12
allele count: 1
allele frequency: 8.422896802668375e-6
allele num: 118724
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000280379
  ensembl transcript: ENST00000280379
  gene symbol: MON2
  hgvsc: ENST00000280379.6:c.1885A>G
  hgvsp: ENSP00000280379.6:p.Thr629Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446635
  ensembl transcript: ENST00000552115
  gene symbol: MON2
  hgvsc: ENST00000552115.1:c.1885A>G
  hgvsp: ENSP00000446635.1:p.Thr629Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000446626
  ensembl transcript: ENST00000547095
  gene symbol: MON2
  hgvsc: ENST00000547095.1:c.*1831A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000447407
  ensembl transcript: ENST00000546600
  gene symbol: MON2
  hgvsc: ENST00000546600.1:c.1885A>G
  hgvsp: ENSP00000447407.1:p.Thr629Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000449215
  ensembl transcript: ENST00000552738
  gene symbol: MON2
  hgvsc: ENST00000552738.1:c.1831+54A>G
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377250
  ensembl transcript: ENST00000393630
  gene symbol: MON2
  hgvsc: ENST00000393630.3:c.1885A>G
  hgvsp: ENSP00000377250.3:p.Thr629Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377252
  ensembl transcript: ENST00000393632
  gene symbol: MON2
  hgvsc: ENST00000393632.2:c.1885A>G
  hgvsp: ENSP00000377252.2:p.Thr629Ala
  variant of: http://identifiers.org/hgnc/29177
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000061987
  ensembl protein: ENSP00000377249
  ensembl transcript: ENST00000393629
  gene symbol: MON2
  hgvsc: ENST00000393629.2:c.1885A>G
  hgvsp: ENSP00000377249.2:p.Thr629Ala
  variant of: http://identifiers.org/hgnc/29177
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr629Ala
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2419
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3224
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.737091425864519e-5
allele num: 63330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8326
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

DP
type: SiteQuality
SIO_000300: 1.928893e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.53e0

QD
type: SiteQuality
SIO_000300: 1.624e1

GenotypeQuality
all individuals: 1262
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3253
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1434
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8215
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30956
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540499738115044e-5
allele num: 64914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

QD
type: SiteQuality
SIO_000300: 1.229e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

DP
type: SiteQuality
SIO_000300: 1.953914e6

MQRankSum
type: SiteQuality
SIO_000300: 2.85e0

MQ
type: SiteQuality
SIO_000300: 6.101e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

GenotypeQuality
all individuals: 993
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2587
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8215
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3253
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8977
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.926543577526305e-5
allele num: 10074
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.953914e6

MQ
type: SiteQuality
SIO_000300: 6.101e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

MQRankSum
type: SiteQuality
SIO_000300: 2.85e0

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

QD
type: SiteQuality
SIO_000300: 1.229e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

GenotypeQuality
all individuals: 8279
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2609
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9022
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3272
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532520076012996e-5
allele num: 65252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.08e-1

QD
type: SiteQuality
SIO_000300: 1.072e1

DP
type: SiteQuality
SIO_000300: 1.957533e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

MQ
type: SiteQuality
SIO_000300: 5.876e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.05e-1

GenotypeQuality
all individuals: 920
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3264
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8986
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31098
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2277
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8272
bin: 9.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.349072116513977e-4
allele num: 8514
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.048e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.65e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

QD
type: SiteQuality
SIO_000300: 7.76e0

DP
type: SiteQuality
SIO_000300: 1.963585e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.204e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3264
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31098
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528304193666707e-5
allele num: 65432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.91e-1

DP
type: SiteQuality
SIO_000300: 1.963585e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

FS
type: SiteQuality
SIO_000300: 2.048e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.65e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.204e0

GenotypeQuality
all individuals: 2277
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8272
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2605
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8986
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31098
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.174536058256989e-4
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.204e0

QD
type: SiteQuality
SIO_000300: 7.76e0

DP
type: SiteQuality
SIO_000300: 1.963585e6

FS
type: SiteQuality
SIO_000300: 2.048e0

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

MQ
type: SiteQuality
SIO_000300: 5.985e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.65e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.91e-1

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1493
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8338
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31584
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9115
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5148760831364e-5
allele num: 66012
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.649999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.37e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

FS
type: SiteQuality
SIO_000300: 1.245e0

DP
type: SiteQuality
SIO_000300: 1.971447e6

QD
type: SiteQuality
SIO_000300: 1.531e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9147
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2674
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8347
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3310
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.71e-1

FS
type: SiteQuality
SIO_000300: 1.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.256e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.494e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

QD
type: SiteQuality
SIO_000300: 2.253e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.59e-1

DP
type: SiteQuality
SIO_000300: 1.97672e6

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
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GenotypeQuality
all individuals: 9160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 27

GenotypeQuality
all individuals: 31976
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2350
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2682
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.006433768264085e-5
allele num: 66524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 24
allele frequency: 1.454192922927775e-3
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

QD
type: SiteQuality
SIO_000300: 1.428e1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

MQ
type: SiteQuality
SIO_000300: 5.955e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

DP
type: SiteQuality
SIO_000300: 1.981358e6

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
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GenotypeQuality
all individuals: 8364
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
all individuals: 2353
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32012
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50253929140247e-5
allele num: 66554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.48e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.88e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.95e-1

DP
type: SiteQuality
SIO_000300: 1.98157e6

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2348
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 31976
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 18
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variant carriers: 1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 1

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 8384
bin: 9.75e1
variant carriers: 20

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 147
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 4.058441558441559e-4
allele num: 66528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.48e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

DP
type: SiteQuality
SIO_000300: 1.986816e6

VQSLOD
type: SiteQuality
SIO_000300: -3.629e0

FS
type: SiteQuality
SIO_000300: 1.554e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.658e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.9e-1

GenotypeQuality
all individuals: 32005
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3316
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 1507
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variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8393
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00390507659958e-5
allele num: 66580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e-1

DP
type: SiteQuality
SIO_000300: 1.987117e6

MQ
type: SiteQuality
SIO_000300: 5.939e1

VQSLOD
type: SiteQuality
SIO_000300: -3.395e0

FS
type: SiteQuality
SIO_000300: 1.518e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.687e0

QD
type: SiteQuality
SIO_000300: 4.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.21e-1

GenotypeQuality
all individuals: 1511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2355
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8415
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 89
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 32038
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variant carriers: 0

GenotypeQuality
all individuals: 9171
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.991e1

FS
type: SiteQuality
SIO_000300: 9.0e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

VQSLOD
type: SiteQuality
SIO_000300: -3.187e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.69e-1

DP
type: SiteQuality
SIO_000300: 1.988756e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.23e-1

GenotypeQuality
all individuals: 1194
bin: 7.25e1
variant carriers: 11

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 9.25e1
variant carriers: 20

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 6

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 17760
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 34523
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variant carriers: 34270

GenotypeQuality
all individuals: 160
bin: 8.75e1
variant carriers: 15

GenotypeQuality
all individuals: 5082
bin: 6.75e1
variant carriers: 10

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 510
bin: 8.25e1
variant carriers: 27

South Asian
type: Population
allele count: 5976
allele frequency: 3.619624470018171e-1
allele num: 16510
num of homozygotes: 1114

African
type: Population
allele count: 3902
allele frequency: 3.750480584390619e-1
allele num: 10404
num of homozygotes: 733

East Asian
type: Population
allele count: 3084
allele frequency: 3.566967383761277e-1
allele num: 8646
num of homozygotes: 562

European (Finnish)
type: Population
allele count: 2141
allele frequency: 3.239031770045386e-1
allele num: 6610
num of homozygotes: 354

Other
type: Population
allele count: 310
allele frequency: 3.414096916299559e-1
allele num: 908
num of homozygotes: 55

Latino
type: Population
allele count: 3292
allele frequency: 2.845781466113416e-1
allele num: 11568
num of homozygotes: 471

European (Non-Finnish)
type: Population
allele count: 23063
allele frequency: 3.457410128024466e-1
allele num: 66706
num of homozygotes: 4068

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.48e-1

FS
type: SiteQuality
SIO_000300: 7.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.27e-1

DP
type: SiteQuality
SIO_000300: 4.817261e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.889e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.698e1

VQSLOD
type: SiteQuality
SIO_000300: 3.74e0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14517
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
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variant carriers: 0

GenotypeQuality
all individuals: 36296
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.052e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.61e0

DP
type: SiteQuality
SIO_000300: 3.508087e6

VQSLOD
type: SiteQuality
SIO_000300: -1.466e0

QD
type: SiteQuality
SIO_000300: 1.019e1

FS
type: SiteQuality
SIO_000300: 3.511e0

MQ
type: SiteQuality
SIO_000300: 5.887e1

MQRankSum
type: SiteQuality
SIO_000300: -1.392e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
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GenotypeQuality
all individuals: 3502
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 1366
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GenotypeQuality
all individuals: 592
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GenotypeQuality
all individuals: 36329
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14521
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.361e-1

MQ
type: SiteQuality
SIO_000300: 5.927e1

QD
type: SiteQuality
SIO_000300: 1.902e1

FS
type: SiteQuality
SIO_000300: 2.792e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.981e0

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

DP
type: SiteQuality
SIO_000300: 3.508244e6

GenotypeQuality
all individuals: 3504
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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MQRankSum
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MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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DP
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BaseQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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Other
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East Asian
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Latino
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InbreedingCoeff
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DP
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QD
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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East Asian
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Other
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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MQRankSum
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QD
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FS
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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DP
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Non-Finnish)
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East Asian
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African
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European (Finnish)
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num of homozygotes: 0

MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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Other
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South Asian
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European (Non-Finnish)
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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DP
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BaseQRankSum
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QD
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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South Asian
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MQRankSum
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DP
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FS
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QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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African
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South Asian
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Latino
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European (Finnish)
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East Asian
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VQSLOD
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ClippingRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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MQ
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QD
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BaseQRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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FS
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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Other
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Latino
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European (Non-Finnish)
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South Asian
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FS
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VQSLOD
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ClippingRankSum
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QD
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ReadPosRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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SIO_000300: 4.52e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 382
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 448
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.393e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.38e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.512458e6

MQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

MQ
type: SiteQuality
SIO_000300: 5.999e1

GenotypeQuality
all individuals: 13029
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3365
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501636784094663e-5
allele num: 66594
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.38e-1

QD
type: SiteQuality
SIO_000300: 1.393e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

MQ
type: SiteQuality
SIO_000300: 5.999e1

DP
type: SiteQuality
SIO_000300: 3.512458e6

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 689
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variant carriers: 168

GenotypeQuality
all individuals: 2113
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 11
allele frequency: 9.628851540616247e-4
allele num: 11424
num of homozygotes: 0

African
type: Population
allele count: 161
allele frequency: 1.578121936875123e-2
allele num: 10202
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.053062221408072e-5
allele num: 65508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16244
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.69e0

DP
type: SiteQuality
SIO_000300: 3.705619e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.271e0

QD
type: SiteQuality
SIO_000300: 1.461e1

MQ
type: SiteQuality
SIO_000300: 5.994e1

GenotypeQuality
all individuals: 1924
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.803921568627451e-3
allele num: 102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.14704e6

VQSLOD
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.426e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

FS
type: SiteQuality
SIO_000300: 1.496e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

QD
type: SiteQuality
SIO_000300: 1.42e1

MQ
type: SiteQuality
SIO_000300: 5.885e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.89e-1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 68

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 47

GenotypeQuality
all individuals: 423
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variant carriers: 423

GenotypeQuality
all individuals: 236
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variant carriers: 236

GenotypeQuality
all individuals: 963
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variant carriers: 963

GenotypeQuality
all individuals: 475
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variant carriers: 475

GenotypeQuality
all individuals: 1025
bin: 8.25e1
variant carriers: 1025

GenotypeQuality
all individuals: 52494
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variant carriers: 52494

GenotypeQuality
all individuals: 916
bin: 7.75e1
variant carriers: 916

GenotypeQuality
all individuals: 1399
bin: 9.25e1
variant carriers: 1399

GenotypeQuality
all individuals: 172
bin: 4.25e1
variant carriers: 172

Latino
type: Population
allele count: 11545
allele frequency: 9.983569699066067e-1
allele num: 11564
num of homozygotes: 5763

European (Finnish)
type: Population
allele count: 6592
allele frequency: 1.0e0
allele num: 6592
num of homozygotes: 3296

African
type: Population
allele count: 10338
allele frequency: 9.951867539468617e-1
allele num: 10388
num of homozygotes: 5144

Other
type: Population
allele count: 907
allele frequency: 9.98898678414097e-1
allele num: 908
num of homozygotes: 453

South Asian
type: Population
allele count: 16508
allele frequency: 1.0e0
allele num: 16508
num of homozygotes: 8254

European (Non-Finnish)
type: Population
allele count: 66640
allele frequency: 9.998799663905894e-1
allele num: 66648
num of homozygotes: 33316

East Asian
type: Population
allele count: 8624
allele frequency: 1.0e0
allele num: 8624
num of homozygotes: 4312

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

QD
type: SiteQuality
SIO_000300: 3.032e1

MQ
type: SiteQuality
SIO_000300: 6.028e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

FS
type: SiteQuality
SIO_000300: 4.298e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

DP
type: SiteQuality
SIO_000300: 3.352978e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.45e-1

GenotypeQuality
all individuals: 20
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.5e0
variant carriers: 10

GenotypeQuality
all individuals: 6
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variant carriers: 1

GenotypeQuality
all individuals: 32
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variant carriers: 6

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 9
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 23
allele frequency: 1.597222222222222e-1
allele num: 144
num of homozygotes: 10

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e0

FS
type: SiteQuality
SIO_000300: 4.326e0

MQ
type: SiteQuality
SIO_000300: 5.151e1

QD
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.119702e6

MQRankSum
type: SiteQuality
SIO_000300: -5.822e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.885e0

VQSLOD
type: SiteQuality
SIO_000300: -1.124e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.037e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.26e-2

GenotypeQuality
all individuals: 364
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 194
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variant carriers: 0

GenotypeQuality
all individuals: 166
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GenotypeQuality
all individuals: 19
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 348
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variant carriers: 0

GenotypeQuality
all individuals: 3495
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variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1

DP
type: SiteQuality
SIO_000300: 3.403759e6

MQ
type: SiteQuality
SIO_000300: 6.078e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.677e-1

QD
type: SiteQuality
SIO_000300: 1.353e1

GenotypeQuality
all individuals: 283
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variant carriers: 0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3443
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1478
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523275651961979e-5
allele num: 65648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.396914e6

VQSLOD
type: SiteQuality
SIO_000300: -8.110000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.448e0

FS
type: SiteQuality
SIO_000300: 7.944e0

QD
type: SiteQuality
SIO_000300: 3.1e0

MQ
type: SiteQuality
SIO_000300: 6.048e1

GenotypeQuality
all individuals: 1802
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5820
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 750
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variant carriers: 0

GenotypeQuality
all individuals: 977
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variant carriers: 0

GenotypeQuality
all individuals: 1798
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.848770567572564e-5
allele num: 54090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6060
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

DP
type: SiteQuality
SIO_000300: 1.157975e6

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.489e0

QD
type: SiteQuality
SIO_000300: 1.196e1

MQ
type: SiteQuality
SIO_000300: 5.975e1

MQRankSum
type: SiteQuality
SIO_000300: 6.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 4428
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4258
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variant carriers: 0

GenotypeQuality
all individuals: 6984
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variant carriers: 0

GenotypeQuality
all individuals: 5878
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.847745750184775e-5
allele num: 54120
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6054
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8738
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.288327750579748e-4
allele num: 7762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
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ClippingRankSum
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SIO_000300: -1.63e-1

FS
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 6.8e-3

BaseQRankSum
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ReadPosRankSum
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SIO_000300: -5.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
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VQSLOD
type: SiteQuality
SIO_000300: -5.991e-1

DP
type: SiteQuality
SIO_000300: 1.160172e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54608
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 2.247191011235955e-4
allele num: 8900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10812
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7822
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6106
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.155e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.31e0

MQ
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VQSLOD
type: SiteQuality
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MQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 4.03e0

DP
type: SiteQuality
SIO_000300: 1.240639e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6180
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.187798603454613e-5
allele num: 10884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7974
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.01e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.61e-1

QD
type: SiteQuality
SIO_000300: 1.415e1

DP
type: SiteQuality
SIO_000300: 1.293565e6

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6204
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.240079365079365e-4
allele num: 8064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-1

DP
type: SiteQuality
SIO_000300: 1.312935e6

MQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.4e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.042e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.781578478531979e-5
allele num: 56130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6246
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e0

QD
type: SiteQuality
SIO_000300: 1.311e1

VQSLOD
type: SiteQuality
SIO_000300: -5.396e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.79e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.29e-1

DP
type: SiteQuality
SIO_000300: 1.322571e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.45950864422202e-4
allele num: 10990
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8170
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

DP
type: SiteQuality
SIO_000300: 1.336543e6

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 8.63e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.00250626566416e-4
allele num: 59850
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 10566
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7834
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
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FS
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

ClippingRankSum
type: SiteQuality
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QD
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VQSLOD
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DP
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.067e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62980
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11964
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

QD
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.036269430051813e-4
allele num: 9650
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12162
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.263144598477911e-4
allele num: 63334
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8406
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6540
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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DP
type: SiteQuality
SIO_000300: 1.479348e6

QD
type: SiteQuality
SIO_000300: 1.252e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Non-Finnish)
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allele count: 7
allele frequency: 1.07958050586058e-4
allele num: 64840
num of homozygotes: 0

MQ
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
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MQRankSum
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SIO_000300: -9.31e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
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SIO_000300: 2.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.001e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
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allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65972
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15224
num of homozygotes: 0

African
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allele frequency: 9.765625000000001e-5
allele num: 10240
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQRankSum
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ClippingRankSum
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DP
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FS
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SIO_000300: 1.233e0

BaseQRankSum
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InbreedingCoeff
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SIO_000300: 8.800000000000001e-3

MQ
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SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15494
num of homozygotes: 0

European (Finnish)
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allele count: 3
allele frequency: 4.564820450395618e-4
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66084
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.805e0

FS
type: SiteQuality
SIO_000300: 3.71931e2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.936e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.550386e6

QD
type: SiteQuality
SIO_000300: 9.0e-2

MQ
type: SiteQuality
SIO_000300: 5.787e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501907422426482e-5
allele num: 66582
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.405e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e-1

QD
type: SiteQuality
SIO_000300: 7.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.525e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.135e0

DP
type: SiteQuality
SIO_000300: 1.569163e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: -1.056e0

QD
type: SiteQuality
SIO_000300: 1.018e1

FS
type: SiteQuality
SIO_000300: 6.49e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 1.574369e6

VQSLOD
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.18e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66634
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European (Finnish)
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allele count: 0
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allele num: 6614
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South Asian
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allele count: 5
allele frequency: 3.031037827352086e-4
allele num: 16496
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
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MQ
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.232142857142857e-3
allele num: 896
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European (Finnish)
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allele count: 10
allele frequency: 1.546551190844417e-3
allele num: 6466
num of homozygotes: 0

African
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allele count: 11
allele frequency: 1.07484854406879e-3
allele num: 10234
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European (Non-Finnish)
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allele count: 28
allele frequency: 4.236646996519897e-4
allele num: 66090
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -2.5e-3

DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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South Asian
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Other
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European (Non-Finnish)
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allele frequency: 1.500240038406145e-5
allele num: 66656
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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DP
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FS
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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allele num: 66656
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European (Finnish)
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VQSLOD
type: SiteQuality
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MQRankSum
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MQ
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DP
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ReadPosRankSum
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FS
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BaseQRankSum
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.657e1

DP
type: SiteQuality
SIO_000300: 1.592215e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

MQ
type: SiteQuality
SIO_000300: 5.462e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.197e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.859e0

FS
type: SiteQuality
SIO_000300: 3.353e0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.000210014701029e-5
allele num: 66662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

QD
type: SiteQuality
SIO_000300: 1.438e1

DP
type: SiteQuality
SIO_000300: 1.592461e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.253e0

FS
type: SiteQuality
SIO_000300: 7.154e0

MQRankSum
type: SiteQuality
SIO_000300: -1.088e0

VQSLOD
type: SiteQuality
SIO_000300: -1.113e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 112

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 79
allele frequency: 1.195158850226929e-2
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 31
allele frequency: 4.650325522786595e-4
allele num: 66662
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.32e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.601337e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.63e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.595738e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.18e-1

QD
type: SiteQuality
SIO_000300: 1.175e1

FS
type: SiteQuality
SIO_000300: 3.613e0

MQRankSum
type: SiteQuality
SIO_000300: 7.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500045000450004e-5
allele num: 66666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.24e0

DP
type: SiteQuality
SIO_000300: 1.596075e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.51e-1

FS
type: SiteQuality
SIO_000300: 1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.12e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.602e1

VQSLOD
type: SiteQuality
SIO_000300: -2.855e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
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QD
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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DP
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele num: 8640
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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ReadPosRankSum
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DP
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QD
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BaseQRankSum
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SIO_000300: -4.213e0

FS
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 908
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.499640028797696e-5
allele num: 66672
num of homozygotes: 0

South Asian
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ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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QD
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 10400
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
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Other
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.007337904486948e-5
allele num: 66504
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
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FS
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MQ
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ClippingRankSum
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 2
allele frequency: 3.02571860816944e-4
allele num: 6610
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 34
allele frequency: 2.938126512270999e-3
allele num: 11572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
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European (Non-Finnish)
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allele count: 118
allele frequency: 1.775236948999549e-3
allele num: 66470
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 1.103752759381898e-3
allele num: 906
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FS
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SIO_000300: 0.0e0

VQSLOD
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QD
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InbreedingCoeff
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MQRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 19
allele frequency: 2.860325776051546e-4
allele num: 66426
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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MQ
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ReadPosRankSum
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FS
type: SiteQuality
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MQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66412
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East Asian
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Other
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQ
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QD
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DP
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BaseQRankSum
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66246
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South Asian
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Other
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African
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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FS
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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East Asian
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South Asian
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QD
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DP
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ClippingRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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