16-2154676-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154676
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2154676
    reference: chr 16
allele count: 1
allele frequency: 3.445899379738112e-4
allele num: 2902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1262-33G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1725-33G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.539-33G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8017-33G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.78-33G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8017-33G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2253-33G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2704-33G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1742-33G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2153-33G>A
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20078
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5358
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

16-2154687-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2154687
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2154687
    reference: chr 16
allele count: 7
allele frequency: 3.213957759412305e-3
allele num: 2178
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8017-44G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.539-44G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2153-44G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1725-44G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1262-44G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2253-44G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2704-44G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8017-44G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.78-44G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1742-44G>C
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 18445
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8212
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

16-2155275-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155275
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155275
    reference: chr 16
allele count: 123
allele frequency: 1.33564990769899e-3
allele num: 92090
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+48A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+48A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+48A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+48A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+48A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+48A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+48A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+48A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+48A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+48A>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 12239
  bin: 1.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 10325
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10980
  bin: 1.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2957
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4633
  bin: 2.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 2840
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4954
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2011
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

16-2155276-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155276
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155276
    reference: chr 16
allele count: 4
allele frequency: 4.350190320826536e-5
allele num: 91950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+47C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+47C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+47C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+47C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+47C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+47C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+47C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+47C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+47C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+47C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10947
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10320
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12207
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4695
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

16-2155277-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155277
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155277
    reference: chr 16
allele count: 6
allele frequency: 6.526705101707821e-5
allele num: 91930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+46G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+46G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+46G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+46G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+46G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+46G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+46G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+46G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+46G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+46G>A
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12158
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2898
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7499
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9472
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4308
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

16-2155288-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155288
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155288
    reference: chr 16
allele count: 1
allele frequency: 1.07148979941711e-5
allele num: 93328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+35T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+35T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+35T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+35T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+35T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+35T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+35T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+35T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+35T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+35T>C
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19646
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum

16-2155289-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155289
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155289
    reference: chr 16
allele count: 2
allele frequency: 2.140823360664512e-5
allele num: 93422
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+34A>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+34A>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+34A>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+34A>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+34A>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+34A>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+34A>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+34A>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+34A>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+34A>C
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9122
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20176
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1893
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/16-2155291-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155291
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155291
    reference: chr 16
allele count: 1
allele frequency: 1.074806534823732e-5
allele num: 93040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+32G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+32G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+32G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+32G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+32G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+32G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+32G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+32G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+32G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+32G>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20338
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

16-2155291-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155291
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155291
    reference: chr 16
allele count: 2
allele frequency: 2.149613069647463e-5
allele num: 93040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+32G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+32G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+32G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+32G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+32G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+32G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+32G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+32G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+32G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+32G>A
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8424
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2806
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3592
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD

16-2155292-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155292
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155292
    reference: chr 16
allele count: 50
allele frequency: 5.315077812739178e-4
allele num: 94072
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+31C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+31C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+31C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+31C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+31C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+31C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+31C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+31C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+31C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+31C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21545
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6992
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7170
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1671
  bin: 7.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-2155292-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155292
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155292
    reference: chr 16
allele count: 1
allele frequency: 1.063015562547836e-5
allele num: 94072
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+31C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+31C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+31C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+31C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+31C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+31C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+31C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+31C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+31C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+31C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7502
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1304
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6958
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

16-2155295-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155295
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155295
    reference: chr 16
allele count: 2
allele frequency: 2.102518817543417e-5
allele num: 95124
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+28C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+28C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+28C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+28C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+28C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+28C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+28C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+28C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+28C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+28C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22513
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1984
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ

16-2155297-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155297
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155297
    reference: chr 16
allele count: 7823
allele frequency: 8.477827387403009e-2
allele num: 92276
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+26T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+26T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+26T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+26T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+26T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+26T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+26T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+26T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+26T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+26T>C
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 7.5e0
  variant carriers: 866
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 3640
  bin: 3.25e1
  variant carriers: 677
genotype depth: GenotypeDepth
  all individuals: 22450
  bin: 2.25e1
  variant carriers: 1690
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.75e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 5167
  bin: 1.25e1
  variant carriers: 989
genotype depth: GenotypeDepth
  all individuals: 8369
  bin: 2.75e1
  variant carriers: 1127
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.25e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 2.5e0
  variant carriers: 354
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 1.75e1
  variant carriers: 1565
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 3.75e1
  variant carriers: 326
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.25e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 7.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.75e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 9.75e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 4.75e1
  variant carriers: 239
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 4.25e1
  variant carriers: 246
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 8.75e1
  variant carriers: 186
num of homozygotes: 472
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

16-2155298-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155298
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155298
    reference: chr 16
allele count: 1
allele frequency: 1.007861318282604e-5
allele num: 99220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+25C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+25C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+25C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+25C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+25C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+25C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+25C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+25C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+25C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+25C>A
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2745
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23141
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5758
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

16-2155300-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155300
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155300
    reference: chr 16
allele count: 1
allele frequency: 1.002265119169323e-5
allele num: 99774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+23C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+23C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+23C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+23C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+23C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+23C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+23C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+23C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+23C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+23C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8887
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4957
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5654
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1630
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

16-2155302-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155302
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155302
    reference: chr 16
allele count: 2
allele frequency: 1.995808801516815e-5
allele num: 100210
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+21C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+21C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+21C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+21C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+21C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+21C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+21C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+21C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+21C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+21C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5581
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5384
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

16-2155303-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155303
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155303
    reference: chr 16
allele count: 2
allele frequency: 1.99008935501204e-5
allele num: 100498
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+20T>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+20T>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+20T>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+20T>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+20T>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+20T>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+20T>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+20T>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+20T>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+20T>A
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4696
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

16-2155304-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155304
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155304
    reference: chr 16
allele count: 1
allele frequency: 9.945498667303179e-6
allele num: 100548
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+19C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+19C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+19C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+19C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+19C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+19C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+19C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+19C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+19C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+19C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5554
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

16-2155307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155307
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155307
    reference: chr 16
allele count: 1
allele frequency: 9.867966606801003e-6
allele num: 101338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+16C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+16C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+16C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+16C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+16C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+16C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+16C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+16C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+16C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+16C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9433
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5451
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

16-2155309-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155309
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155308
    reference: chr 16
allele count: 3
allele frequency: 2.962143802207784e-5
allele num: 101278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+13delC
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+13delC
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+13delC
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+13delC
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+13delC
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+13delC
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+13delC
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+13delC
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+13delC
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+13delC
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3559
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9566
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25598
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5285
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: TG
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

16-2155310-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155310
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155310
    reference: chr 16
allele count: 1
allele frequency: 9.865240810528185e-6
allele num: 101366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+13C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+13C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+13C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+13C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+13C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+13C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+13C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+13C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+13C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+13C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25532
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

16-2155311-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155311
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155311
    reference: chr 16
allele count: 2
allele frequency: 1.972736777731747e-5
allele num: 101382
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+12C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+12C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+12C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+12C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+12C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+12C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+12C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+12C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+12C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+12C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5387
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2212
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-2155312-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155312
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155312
    reference: chr 16
allele count: 2
allele frequency: 1.97125904315086e-5
allele num: 101458
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+11C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+11C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+11C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+11C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+11C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+11C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+11C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+11C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+11C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+11C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9605
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

16-2155313-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155313
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155313
    reference: chr 16
allele count: 1
allele frequency: 9.856100926473488e-6
allele num: 101460
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+10C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+10C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+10C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+10C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+10C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+10C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+10C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+10C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+10C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+10C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9634
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24844
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5359
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25857
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

16-2155316-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155316
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155316
    reference: chr 16
allele count: 1
allele frequency: 9.840388892169019e-6
allele num: 101622
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.538+7T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.77+7T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8016+7T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1261+7T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2703+7T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2152+7T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1724+7T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8016+7T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2252+7T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1741+7T>C
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4765
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 3.75e1
  variant carriers: 0
hgvs: c.8016+7T>C
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

16-2155324-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155324
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155324
    reference: chr 16
allele count: 1
allele frequency: 9.833615230303269e-6
allele num: 101692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.537T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1260T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1723T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2251T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.76T>C
  hgvsp: ENSP00000457984.1:p.Met26Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8015T>C
  hgvsp: ENSP00000399501.1:p.Met2672Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2151T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1740T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2702T>C
  hgvsp: ENSP00000457132.1:p.Met901Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8015T>C
  hgvsp: ENSP00000262304.4:p.Met2672Thr
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22189
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met2672Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

16-2155326-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155326
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155326
    reference: chr 16
allele count: 3
allele frequency: 2.951477706505057e-5
allele num: 101644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.74C>T
  hgvsp: ENST00000567946.1:c.74C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1721C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8013C>T
  hgvsp: ENST00000262304.4:c.8013C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1258C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1738C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2700C>T
  hgvsp: ENST00000487932.1:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2149C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8013C>T
  hgvsp: ENST00000423118.1:c.8013C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.535C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2249C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1701
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5752
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Cys2671Cys
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

16-2155330-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155330
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155330
    reference: chr 16
allele count: 11
allele frequency: 1.081187340279143e-4
allele num: 101740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2245A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2696A>G
  hgvsp: ENSP00000457132.1:p.Gln899Arg
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1734A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1717A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8009A>G
  hgvsp: ENSP00000399501.1:p.Gln2670Arg
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2145A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8009A>G
  hgvsp: ENSP00000262304.4:p.Gln2670Arg
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1254A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.70A>G
  hgvsp: ENSP00000457984.1:p.Gln24Arg
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.531A>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4093
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9614
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20800
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln2670Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

16-2155332-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155332
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155332
    reference: chr 16
allele count: 1
allele frequency: 9.8405825624877e-6
allele num: 101620
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8007C>G
  hgvsp: ENST00000423118.1:c.8007C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1715C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1732C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.68C>G
  hgvsp: ENST00000567946.1:c.68C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8007C>G
  hgvsp: ENST00000262304.4:c.8007C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1252C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2694C>G
  hgvsp: ENST00000487932.1:c.2694C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2143C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.529C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2243C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19878
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala2669Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

16-2155334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155334
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155334
    reference: chr 16
allele count: 1
allele frequency: 9.852993339376503e-6
allele num: 101492
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1250G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1730G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.66G>A
  hgvsp: ENSP00000457984.1:p.Ala23Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8005G>A
  hgvsp: ENSP00000399501.1:p.Ala2669Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8005G>A
  hgvsp: ENSP00000262304.4:p.Ala2669Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2692G>A
  hgvsp: ENSP00000457132.1:p.Ala898Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1713G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.527G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2141G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2241G>A
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19444
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4075
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5751
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala2669Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

16-2155337-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155337
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155337
    reference: chr 16
allele count: 1
allele frequency: 9.848335631278313e-6
allele num: 101540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2238C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.524C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1247C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8002C>T
  hgvsp: ENST00000262304.4:c.8002C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.63C>T
  hgvsp: ENST00000567946.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1710C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8002C>T
  hgvsp: ENST00000423118.1:c.8002C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1727C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2689C>T
  hgvsp: ENST00000487932.1:c.2689C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2138C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu2668Leu
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

16-2155337-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155337
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155337
    reference: chr 16
allele count: 2
allele frequency: 1.969667126255663e-5
allele num: 101540
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.524C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2689C>G
  hgvsp: ENSP00000457132.1:p.Leu897Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1727C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2138C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8002C>G
  hgvsp: ENSP00000399501.1:p.Leu2668Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1247C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.63C>G
  hgvsp: ENSP00000457984.1:p.Leu22Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8002C>G
  hgvsp: ENSP00000262304.4:p.Leu2668Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2238C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1710C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9473
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4897
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu2668Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

16-2155338-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155338
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155338
    reference: chr 16
allele count: 2
allele frequency: 1.97226988541112e-5
allele num: 101406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2688G>A
  hgvsp: ENST00000487932.1:c.2688G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1726G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2237G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.523G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8001G>A
  hgvsp: ENST00000262304.4:c.8001G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8001G>A
  hgvsp: ENST00000423118.1:c.8001G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1709G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1246G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2137G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.62G>A
  hgvsp: ENST00000567946.1:c.62G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18805
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9581
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2769
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala2667Ala
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

16-2155339-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155339
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155339
    reference: chr 16
allele count: 1
allele frequency: 9.864267676767678e-6
allele num: 101376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.61C>T
  hgvsp: ENSP00000457984.1:p.Ala21Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.522C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2687C>T
  hgvsp: ENSP00000457132.1:p.Ala896Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.8000C>T
  hgvsp: ENSP00000399501.1:p.Ala2667Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1708C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1245C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.8000C>T
  hgvsp: ENSP00000262304.4:p.Ala2667Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1725C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2136C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2236C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4094
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2260
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala2667Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

16-2155340-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155340
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155340
    reference: chr 16
allele count: 1
allele frequency: 9.845620667926906e-6
allele num: 101568
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1724G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1244G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7999G>C
  hgvsp: ENSP00000262304.4:p.Ala2667Pro
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2686G>C
  hgvsp: ENSP00000457132.1:p.Ala896Pro
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2235G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7999G>C
  hgvsp: ENSP00000399501.1:p.Ala2667Pro
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1707G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.60G>C
  hgvsp: ENSP00000457984.1:p.Ala21Pro
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.521G>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2135G>C
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7368
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5300
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala2667Pro
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

16-2155341-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155341
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155341
    reference: chr 16
allele count: 1
allele frequency: 9.834969216546351e-6
allele num: 101678
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1243T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2134T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2234T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1723T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1706T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.520T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7998T>C
  hgvsp: ENST00000262304.4:c.7998T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2685T>C
  hgvsp: ENST00000487932.1:c.2685T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7998T>C
  hgvsp: ENST00000423118.1:c.7998T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.59T>C
  hgvsp: ENST00000567946.1:c.59T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4929
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala2666Ala
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

16-2155345-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155345
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155345
    reference: chr 16
allele count: 1
allele frequency: 9.85144028056902e-6
allele num: 101508
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2681C>T
  hgvsp: ENSP00000457132.1:p.Ala894Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.55C>T
  hgvsp: ENSP00000457984.1:p.Ala19Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.516C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2230C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2130C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7994C>T
  hgvsp: ENSP00000399501.1:p.Ala2665Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1702C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7994C>T
  hgvsp: ENSP00000262304.4:p.Ala2665Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1239C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1719C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3583
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18977
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1672
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala2665Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

16-2155346-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155346
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155346
    reference: chr 16
allele count: 34
allele frequency: 3.354181875579583e-4
allele num: 101366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1701G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7993G>A
  hgvsp: ENSP00000399501.1:p.Ala2665Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.515G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2129G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1718G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.54G>A
  hgvsp: ENSP00000457984.1:p.Ala19Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1238G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7993G>A
  hgvsp: ENSP00000262304.4:p.Ala2665Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2680G>A
  hgvsp: ENSP00000457132.1:p.Ala894Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2229G>A
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9434
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18860
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5228
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala2665Thr
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

16-2155347-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155347
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155347
    reference: chr 16
allele count: 22
allele frequency: 2.171252615372469e-4
allele num: 101324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1700C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2679C>T
  hgvsp: ENST00000487932.1:c.2679C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.53C>T
  hgvsp: ENST00000567946.1:c.53C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.514C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7992C>T
  hgvsp: ENST00000262304.4:c.7992C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7992C>T
  hgvsp: ENST00000423118.1:c.7992C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2128C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1717C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1237C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2228C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7252
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18704
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4128
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9572
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2068
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile2664Ile
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

16-2155355-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155355
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155355
    reference: chr 16
allele count: 1
allele frequency: 9.746208724806051e-6
allele num: 102604
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1229C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7984C>T
  hgvsp: ENSP00000262304.4:p.Gln2662Ter
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7984C>T
  hgvsp: ENSP00000399501.1:p.Gln2662Ter
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.45C>T
  hgvsp: ENSP00000457984.1:p.Gln16Ter
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2671C>T
  hgvsp: ENSP00000457132.1:p.Gln891Ter
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1709C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.506C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2220C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2120C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1692C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3642
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6270
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln2662Ter
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

16-2155356-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155356
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155356
    reference: chr 16
allele count: 2
allele frequency: 1.942388749684362e-5
allele num: 102966
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2219C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.44C>T
  hgvsp: ENST00000567946.1:c.44C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.505C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7983C>T
  hgvsp: ENST00000262304.4:c.7983C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7983C>T
  hgvsp: ENST00000423118.1:c.7983C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1691C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1708C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2119C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2670C>T
  hgvsp: ENST00000487932.1:c.2670C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1228C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14197
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3041
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19074
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4987
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile2661Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

16-2155359-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155359
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155359
    reference: chr 16
allele count: 1
allele frequency: 9.648784253184099e-6
allele num: 103640
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2667C>T
  hgvsp: ENST00000487932.1:c.2667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.502C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7980C>T
  hgvsp: ENST00000423118.1:c.7980C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1705C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1688C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.41C>T
  hgvsp: ENST00000567946.1:c.41C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2216C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7980C>T
  hgvsp: ENST00000262304.4:c.7980C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.479C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2116C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1225C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15297
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp2660Asp
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

16-2155368-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155368
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155368
    reference: chr 16
allele count: 1
allele frequency: 9.42151874882231e-6
allele num: 106140
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.493T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7971T>C
  hgvsp: ENST00000262304.4:c.7971T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1216T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1696T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.32T>C
  hgvsp: ENST00000567946.1:c.32T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1679T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2207T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7971T>C
  hgvsp: ENST00000423118.1:c.7971T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2107T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.470T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2658T>C
  hgvsp: ENST00000487932.1:c.2658T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr2657Thr
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

16-2155370-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155370
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155370
    reference: chr 16
allele count: 1
allele frequency: 9.387732111676462e-6
allele num: 106522
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7969A>G
  hgvsp: ENSP00000262304.4:p.Thr2657Ala
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2656A>G
  hgvsp: ENSP00000457132.1:p.Thr886Ala
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.491A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2205A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7969A>G
  hgvsp: ENSP00000399501.1:p.Thr2657Ala
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.30A>G
  hgvsp: ENSP00000457984.1:p.Thr11Ala
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2105A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1214A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1694A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1677A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.468A>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17621
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr2657Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum

16-2155374-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155374
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155374
    reference: chr 16
allele count: 2
allele frequency: 1.866925547009185e-5
allele num: 107128
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1673C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1690C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7965C>G
  hgvsp: ENST00000262304.4:c.7965C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2101C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2201C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2652C>G
  hgvsp: ENST00000487932.1:c.2652C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.26C>G
  hgvsp: ENST00000567946.1:c.26C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.464C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1210C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.487C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7965C>G
  hgvsp: ENST00000423118.1:c.7965C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5256
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val2655Val
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/16-2155376-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155376
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155376
    reference: chr 16
allele count: 2
allele frequency: 1.860430503618537e-5
allele num: 107502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2199G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1208G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7963G>T
  hgvsp: ENSP00000399501.1:p.Val2655Phe
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2099G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2650G>T
  hgvsp: ENSP00000457132.1:p.Val884Phe
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7963G>T
  hgvsp: ENSP00000262304.4:p.Val2655Phe
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.462G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.485G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1671G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1688G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.24G>T
  hgvsp: ENSP00000457984.1:p.Val9Phe
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17958
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val2655Phe
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

16-2155383-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155383
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155383
    reference: chr 16
allele count: 1
allele frequency: 9.209629588697943e-6
allele num: 108582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2192C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7956C>G
  hgvsp: ENST00000423118.1:c.7956C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.17C>G
  hgvsp: ENST00000567946.1:c.17C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1664C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1681C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.570C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1201C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.478C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2643C>G
  hgvsp: ENST00000487932.1:c.2643C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7956C>G
  hgvsp: ENST00000262304.4:c.7956C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2092C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.455C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser2652Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS

16-2155383-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155383
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155383
    reference: chr 16
allele count: 2
allele frequency: 1.841925917739589e-5
allele num: 108582
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1201C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2192C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1681C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.17C>A
  hgvsp: ENST00000567946.1:c.17C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.478C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1664C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7956C>A
  hgvsp: ENST00000423118.1:c.7956C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2092C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7956C>A
  hgvsp: ENST00000262304.4:c.7956C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.570C>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2643C>A
  hgvsp: ENST00000487932.1:c.2643C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.455C>A
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23199
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser2652Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

16-2155384-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155384
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155384
    reference: chr 16
allele count: 3
allele frequency: 2.760549901540387e-5
allele num: 108674
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7955C>G
  hgvsp: ENSP00000262304.4:p.Ser2652Cys
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2642C>G
  hgvsp: ENSP00000457132.1:p.Ser881Cys
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.16C>G
  hgvsp: ENSP00000457984.1:p.Ser6Cys
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7955C>G
  hgvsp: ENSP00000399501.1:p.Ser2652Cys
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.477C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.569C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1663C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2091C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1200C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2191C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.454C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1680C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5482
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser2652Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

16-2155385-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155385
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155385
    reference: chr 16
allele count: 1
allele frequency: 9.194894994299165e-6
allele num: 108756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7954T>C
  hgvsp: ENSP00000399501.1:p.Ser2652Pro
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7954T>C
  hgvsp: ENSP00000262304.4:p.Ser2652Pro
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1199T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1662T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.453T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2641T>C
  hgvsp: ENSP00000457132.1:p.Ser881Pro
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.476T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.568T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1679T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2190T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.15T>C
  hgvsp: ENSP00000457984.1:p.Ser6Pro
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2090T>C
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser2652Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

16-2155398-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155398
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155398
    reference: chr 16
allele count: 4
allele frequency: 3.648569760653824e-5
allele num: 109632
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2077G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.463G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457984
  ensembl transcript: ENST00000567946
  gene symbol: PKD1
  hgvsc: ENST00000567946.1:c.2G>A
  hgvsp: ENST00000567946.1:c.2G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7941G>A
  hgvsp: ENST00000262304.4:c.7941G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1186G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1666G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1649G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.555G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7941G>A
  hgvsp: ENST00000423118.1:c.7941G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.440G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2177G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2628G>A
  hgvsp: ENST00000487932.1:c.2628G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23782
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr2647Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

16-2155402-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155402
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155402
    reference: chr 16
allele count: 21
allele frequency: 1.911802192199847e-4
allele num: 109844
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1182T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.551T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.436T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1645T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7937T>C
  hgvsp: ENSP00000262304.4:p.Ile2646Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2624T>C
  hgvsp: ENSP00000457132.1:p.Ile875Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.459T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1662T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7937T>C
  hgvsp: ENSP00000399501.1:p.Ile2646Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2173T>C
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2073T>C
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23892
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18380
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile2646Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

16-2155403-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155403
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155403
    reference: chr 16
allele count: 1
allele frequency: 9.100837277029487e-6
allele num: 109880
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7936A>G
  hgvsp: ENSP00000399501.1:p.Ile2646Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2623A>G
  hgvsp: ENSP00000457132.1:p.Ile875Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.550A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2172A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7936A>G
  hgvsp: ENSP00000262304.4:p.Ile2646Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1661A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1644A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.435A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1181A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2072A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.458A>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile2646Val
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-2155411-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155411
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155411
    reference: chr 16
allele count: 7
allele frequency: 6.362248236748346e-5
allele num: 110024
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7928G>T
  hgvsp: ENSP00000262304.4:p.Arg2643Leu
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1636G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.427G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7928G>T
  hgvsp: ENSP00000399501.1:p.Arg2643Leu
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1653G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.542G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2164G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2064G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2615G>T
  hgvsp: ENSP00000457132.1:p.Arg872Leu
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1173G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.450G>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg2643Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

16-2155418-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155418
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155418
    reference: chr 16
allele count: 1
allele frequency: 9.07737554918122e-6
allele num: 110164
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1629C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.420C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.443C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7921C>G
  hgvsp: ENSP00000399501.1:p.Gln2641Glu
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7921C>G
  hgvsp: ENSP00000262304.4:p.Gln2641Glu
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.535C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2608C>G
  hgvsp: ENSP00000457132.1:p.Gln870Glu
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2157C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1646C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1166C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2057C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln2641Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

16-2155419-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155419
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155419
    reference: chr 16
allele count: 1
allele frequency: 9.077045966160773e-6
allele num: 110168
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1628C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7920C>G
  hgvsp: ENST00000262304.4:c.7920C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.442C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7920C>G
  hgvsp: ENST00000423118.1:c.7920C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2607C>G
  hgvsp: ENST00000487932.1:c.2607C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2056C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2156C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1645C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.419C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.534C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1165C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 18464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2640Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

16-2155420-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155420
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155420
    reference: chr 16
allele count: 2
allele frequency: 1.815244422661511e-5
allele num: 110178
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.441C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1164C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2606C>T
  hgvsp: ENSP00000457132.1:p.Ala869Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7919C>T
  hgvsp: ENSP00000399501.1:p.Ala2640Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2155C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1644C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7919C>T
  hgvsp: ENSP00000262304.4:p.Ala2640Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1627C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2055C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.418C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.533C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2640Val
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/16-2155421-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155421
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155421
    reference: chr 16
allele count: 5
allele frequency: 4.537205081669691e-5
allele num: 110200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.417G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1626G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.440G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1643G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2154G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2605G>T
  hgvsp: ENSP00000457132.1:p.Ala869Ser
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7918G>T
  hgvsp: ENSP00000262304.4:p.Ala2640Ser
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2054G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7918G>T
  hgvsp: ENSP00000399501.1:p.Ala2640Ser
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.532G>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1163G>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2640Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

16-2155424-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155424
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155424
    reference: chr 16
allele count: 1
allele frequency: 9.072434315575554e-6
allele num: 110224
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.437C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7915C>G
  hgvsp: ENSP00000262304.4:p.Arg2639Gly
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1623C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2151C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.414C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2602C>G
  hgvsp: ENSP00000457132.1:p.Arg868Gly
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1160C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7915C>G
  hgvsp: ENSP00000399501.1:p.Arg2639Gly
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2051C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1640C>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.529C>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23685
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg2639Gly
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

16-2155426-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155426
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155426
    reference: chr 16
allele count: 4424
allele frequency: 4.164391814296741e-2
allele num: 106234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.527A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1621A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2600A>G
  hgvsp: ENSP00000457132.1:p.His867Arg
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7913A>G
  hgvsp: ENSP00000262304.4:p.His2638Arg
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.412A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7913A>G
  hgvsp: ENSP00000399501.1:p.His2638Arg
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2149A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1158A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.435A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1638A>G
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2049A>G
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 5.25e1
  variant carriers: 253
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 7.25e1
  variant carriers: 316
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.75e1
  variant carriers: 326
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 9.75e1
  variant carriers: 577
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 5.75e1
  variant carriers: 281
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 6.25e1
  variant carriers: 329
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 4.75e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 20054
  bin: 2.25e1
  variant carriers: 208
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.25e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 3.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.75e1
  variant carriers: 291
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.25e1
  variant carriers: 309
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 4.25e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 2.5e0
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 16619
  bin: 2.75e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 3.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 8.25e1
  variant carriers: 271
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 8.75e1
  variant carriers: 202
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 6.75e1
  variant carriers: 334
genotype quality: GenotypeQuality
hgvs: p.His2638Arg
num of homozygotes: 501
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP

16-2155427-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155427
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155427
    reference: chr 16
allele count: 2
allele frequency: 1.804174860627492e-5
allele num: 110854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2148C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1157C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.526C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7912C>T
  hgvsp: ENSP00000399501.1:p.His2638Tyr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.434C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.411C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7912C>T
  hgvsp: ENSP00000262304.4:p.His2638Tyr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1637C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2599C>T
  hgvsp: ENSP00000457132.1:p.His867Tyr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1620C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2048C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His2638Tyr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

16-2155432-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155432
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155432
    reference: chr 16
allele count: 6
allele frequency: 5.413696652530903e-5
allele num: 110830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1615G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2143G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2594G>A
  hgvsp: ENSP00000457132.1:p.Arg865Gln
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.521G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1152G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7907G>A
  hgvsp: ENSP00000262304.4:p.Arg2636Gln
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7907G>A
  hgvsp: ENSP00000399501.1:p.Arg2636Gln
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2043G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.406G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1632G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.429G>A
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20067
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg2636Gln
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

16-2155433-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155433
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155433
    reference: chr 16
allele count: 2
allele frequency: 1.805021570007762e-5
allele num: 110802
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.520C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.428C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1614C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7906C>T
  hgvsp: ENSP00000399501.1:p.Arg2636Trp
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2593C>T
  hgvsp: ENSP00000457132.1:p.Arg865Trp
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.405C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1151C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2142C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7906C>T
  hgvsp: ENSP00000262304.4:p.Arg2636Trp
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2042C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1631C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg2636Trp
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

16-2155436-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155436
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155436
    reference: chr 16
allele count: 3
allele frequency: 2.708265626692666e-5
allele num: 110772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7903G>A
  hgvsp: ENSP00000399501.1:p.Glu2635Lys
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1611G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2590G>A
  hgvsp: ENSP00000457132.1:p.Glu864Lys
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7903G>A
  hgvsp: ENSP00000262304.4:p.Glu2635Lys
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.402G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2139G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1148G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2039G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1628G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.517G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.425G>A
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu2635Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

16-2155437-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155437
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155437
    reference: chr 16
allele count: 5
allele frequency: 4.513613056979851e-5
allele num: 110776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2138C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7902C>T
  hgvsp: ENST00000423118.1:c.7902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.516C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1147C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2038C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1610C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.401C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1627C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7902C>T
  hgvsp: ENST00000262304.4:c.7902C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2589C>T
  hgvsp: ENST00000487932.1:c.2589C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.424C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His2634His
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

16-2155451-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155451
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155451
    reference: chr 16
allele count: 3
allele frequency: 2.712183126604708e-5
allele num: 110612
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7888G>A
  hgvsp: ENSP00000399501.1:p.Ala2630Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.387G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1613G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2124G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1133G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2024G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.410G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1596G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7888G>A
  hgvsp: ENSP00000262304.4:p.Ala2630Thr
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.502G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2575G>A
  hgvsp: ENSP00000457132.1:p.Ala859Thr
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 19850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2630Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ

16-2155452-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155452
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155452
    reference: chr 16
allele count: 5
allele frequency: 4.518997867033007e-5
allele num: 110644
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7887G>A
  hgvsp: ENST00000262304.4:c.7887G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.386G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2574G>A
  hgvsp: ENST00000487932.1:c.2574G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1595G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1132G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2123G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.501G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2023G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.409G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1612G>A
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7887G>A
  hgvsp: ENST00000423118.1:c.7887G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17425
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19859
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2629Ala
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

16-2155453-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155453
    reference: chr 16
  end: Position
    type: ExactPosition
    position: 2155453
    reference: chr 16
allele count: 10
allele frequency: 9.041427822281694e-5
allele num: 110602
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000561991
  gene symbol: PKD1
  hgvsc: ENST00000561991.1:n.408C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000496574
  gene symbol: PKD1
  hgvsc: ENST00000496574.2:n.2122C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000483731
  gene symbol: PKD1
  hgvsc: ENST00000483731.1:n.1611C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000565639
  gene symbol: PKD1
  hgvsc: ENST00000565639.2:n.1594C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000415938
  gene symbol: PKD1
  hgvsc: ENST00000415938.3:n.1131C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000457132
  ensembl transcript: ENST00000487932
  gene symbol: PKD1
  hgvsc: ENST00000487932.1:c.2573C>T
  hgvsp: ENSP00000457132.1:p.Ala858Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000262304
  ensembl transcript: ENST00000262304
  gene symbol: PKD1
  hgvsc: ENST00000262304.4:c.7886C>T
  hgvsp: ENSP00000262304.4:p.Ala2629Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564890
  gene symbol: PKD1
  hgvsc: ENST00000564890.1:n.500C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000008710
  ensembl protein: ENSP00000399501
  ensembl transcript: ENST00000423118
  gene symbol: PKD1
  hgvsc: ENST00000423118.1:c.7886C>T
  hgvsp: ENSP00000399501.1:p.Ala2629Val
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000564865
  gene symbol: PKD1
  hgvsc: ENST00000564865.1:n.385C>T
  variant of: http://identifiers.org/hgnc/9008
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000008710
  ensembl transcript: ENST00000486339
  gene symbol: PKD1
  hgvsc: ENST00000486339.2:n.2022C>T
  variant of: http://identifiers.org/hgnc/9008
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17412
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2665
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala2629Val
num of homozygotes: 1
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/16-2155457-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 2155457
    reference: chr 16
allele count: 1
allele frequency: 9.042735970195143e-6
allele num: 110586
alternate allele: A
canonical: true
consequence: missense
filter: PASS
hgvs: p.Val2628Leu
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.552870090634441e-4
allele num: 1324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 106
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.1e1

FS
type: SiteQuality
SIO_000300: 7.519e0

DP
type: SiteQuality
SIO_000300: 9.0691e4

MQRankSum
type: SiteQuality
SIO_000300: -7.84e-1

QD
type: SiteQuality
SIO_000300: 2.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -1.939e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e-1

GenotypeQuality
all individuals: 49
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 1.75e1
variant carriers: 5

GenotypeQuality
all individuals: 75
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 830
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10744
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 34
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 653
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 20
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 8.75e1
variant carriers: 1

South Asian
type: Population
allele count: 7
allele frequency: 1.598173515981735e-2
allele num: 438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.186e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

DP
type: SiteQuality
SIO_000300: 8.0917e4

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.362e1

MQ
type: SiteQuality
SIO_000300: 3.151e1

FS
type: SiteQuality
SIO_000300: 4.019e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 3311
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1327
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 926
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5593
bin: 9.75e1
variant carriers: 112

GenotypeQuality
all individuals: 1060
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2497
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4683
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 8057
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4684
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1552
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3256
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 489
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 6082
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1548
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 624
bin: 5.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15268
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9236
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4948
num of homozygotes: 0

East Asian
type: Population
allele count: 122
allele frequency: 1.676745464540957e-2
allele num: 7276
num of homozygotes: 1

Other
type: Population
allele count: 1
allele frequency: 1.488095238095238e-3
allele num: 672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49936
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.344e1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

MQ
type: SiteQuality
SIO_000300: 4.862e1

DP
type: SiteQuality
SIO_000300: 1.13104e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.824e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 1445
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2862
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4551
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4973
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5481
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 8495
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2883
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2037
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3280
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2485
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15262
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.026004253782254e-5
allele num: 49838
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9230
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4938
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.906e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.54e0

QD
type: SiteQuality
SIO_000300: 3.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

DP
type: SiteQuality
SIO_000300: 1.13489e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.958e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.19e-1

MQ
type: SiteQuality
SIO_000300: 4.643e1

GenotypeQuality
all individuals: 3301
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1067
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 485
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4955
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2867
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6436
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1270
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2443
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2070
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 471
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4654
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5491
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1534
bin: 7.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 674
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 1.051745898190997e-3
allele num: 4754
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.083423618634886e-4
allele num: 9230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4938
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.713e0

VQSLOD
type: SiteQuality
SIO_000300: -2.576e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.139146e6

MQ
type: SiteQuality
SIO_000300: 4.16e1

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 3.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 214
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18172
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1514
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3232
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3911
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7321
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5511
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 689
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4020
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5038
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.522306287503261e-5
allele num: 15332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4870
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.621e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.269e0

MQ
type: SiteQuality
SIO_000300: 5.046e1

DP
type: SiteQuality
SIO_000300: 1.214531e6

VQSLOD
type: SiteQuality
SIO_000300: -1.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
all individuals: 3069
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4056
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7299
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1043
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18631
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2534
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5512
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1772
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5046
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.946797174093223e-5
allele num: 50674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.264e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.72e-1

MQ
type: SiteQuality
SIO_000300: 4.993e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

DP
type: SiteQuality
SIO_000300: 1.219863e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.157e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e0

FS
type: SiteQuality
SIO_000300: 3.168e0

MQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

GenotypeQuality
all individuals: 1205
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.53851183470642e-5
allele num: 15294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

FS
type: SiteQuality
SIO_000300: 1.6479e1

QD
type: SiteQuality
SIO_000300: 4.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.408e0

MQ
type: SiteQuality
SIO_000300: 4.69e1

VQSLOD
type: SiteQuality
SIO_000300: -3.033e0

DP
type: SiteQuality
SIO_000300: 1.240782e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.86e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4838
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.96290718871364e-5
allele num: 50468
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.4e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.408e0

MQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.240782e6

FS
type: SiteQuality
SIO_000300: 1.6479e1

MQ
type: SiteQuality
SIO_000300: 4.69e1

VQSLOD
type: SiteQuality
SIO_000300: -3.033e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 33

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 900
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variant carriers: 1

GenotypeQuality
all individuals: 4407
bin: 6.75e1
variant carriers: 4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 44
allele frequency: 8.625421469458166e-4
allele num: 51012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15376
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.140046054008792e-4
allele num: 9554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.957261574990107e-4
allele num: 5054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.336541031809677e-4
allele num: 7482
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.627e0

DP
type: SiteQuality
SIO_000300: 1.258571e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

QD
type: SiteQuality
SIO_000300: 6.0e0

FS
type: SiteQuality
SIO_000300: 5.912e0

MQ
type: SiteQuality
SIO_000300: 4.756e1

VQSLOD
type: SiteQuality
SIO_000300: -1.264e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.39e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.61e-1

GenotypeQuality
all individuals: 434
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variant carriers: 0

GenotypeQuality
all individuals: 808
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4407
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5054
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.960323061240492e-5
allele num: 51012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 678
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.87e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.39e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.264e0

FS
type: SiteQuality
SIO_000300: 5.912e0

DP
type: SiteQuality
SIO_000300: 1.258571e6

QD
type: SiteQuality
SIO_000300: 6.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.627e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.61e-1

MQ
type: SiteQuality
SIO_000300: 4.756e1

GenotypeQuality
all individuals: 5528
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 884
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2097
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GenotypeQuality
all individuals: 20532
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.875067813686739e-5
allele num: 51612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15418
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.868e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 7.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.56e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.856e0

FS
type: SiteQuality
SIO_000300: 5.593e0

DP
type: SiteQuality
SIO_000300: 1.277565e6

MQ
type: SiteQuality
SIO_000300: 4.576e1

GenotypeQuality
all individuals: 757
bin: 1.75e1
variant carriers: 374

GenotypeQuality
all individuals: 525
bin: 5.25e1
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GenotypeQuality
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variant carriers: 201

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 169

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 161

GenotypeQuality
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variant carriers: 4480

GenotypeQuality
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bin: 7.25e1
variant carriers: 197

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 230

GenotypeQuality
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variant carriers: 215

GenotypeQuality
all individuals: 1559
bin: 3.25e1
variant carriers: 272

South Asian
type: Population
allele count: 1093
allele frequency: 7.159701296999869e-2
allele num: 15266
num of homozygotes: 55

Latino
type: Population
allele count: 364
allele frequency: 3.805938937682978e-2
allele num: 9564
num of homozygotes: 16

East Asian
type: Population
allele count: 1
allele frequency: 1.297690111601349e-4
allele num: 7706
num of homozygotes: 0

Other
type: Population
allele count: 67
allele frequency: 9.911242603550297e-2
allele num: 676
num of homozygotes: 8

African
type: Population
allele count: 1007
allele frequency: 2.28759654702408e-1
allele num: 4402
num of homozygotes: 137

European (Finnish)
type: Population
allele count: 570
allele frequency: 1.148730350665054e-1
allele num: 4962
num of homozygotes: 22

European (Non-Finnish)
type: Population
allele count: 4721
allele frequency: 9.498993963782697e-2
allele num: 49700
num of homozygotes: 234

FS
type: SiteQuality
SIO_000300: 4.054e0

MQRankSum
type: SiteQuality
SIO_000300: -2.971e0

DP
type: SiteQuality
SIO_000300: 1.359219e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.606e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.401e-1

QD
type: SiteQuality
SIO_000300: 7.25e0

MQ
type: SiteQuality
SIO_000300: 4.617e1

VQSLOD
type: SiteQuality
SIO_000300: 4.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.479e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 536
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.849659662622078e-5
allele num: 54064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5378
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.742e0

VQSLOD
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.665e0

MQ
type: SiteQuality
SIO_000300: 4.44e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
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ReadPosRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.342746e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5408
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.838911364472232e-5
allele num: 54380
num of homozygotes: 0

African
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MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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SIO_000300: -1.6e-3

ClippingRankSum
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SIO_000300: -2.64e-1

QD
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DP
type: SiteQuality
SIO_000300: 1.349442e6

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.659e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 5664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7864
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.945525291828794e-4
allele num: 10280
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 54596
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15636
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
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ReadPosRankSum
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VQSLOD
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QD
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FS
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BaseQRankSum
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DP
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SIO_000300: 1.359996e6

ClippingRankSum
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SIO_000300: 8.0e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.652300949598247e-5
allele num: 54760
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.393e0

DP
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.734e0

InbreedingCoeff
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SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
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SIO_000300: -1.917e0

MQ
type: SiteQuality
SIO_000300: 4.222e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.682416731216112e-5
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54778
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15660
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.858e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.021e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

QD
type: SiteQuality
SIO_000300: 2.211e1

DP
type: SiteQuality
SIO_000300: 1.366215e6

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.107e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.44e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15706
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55238
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East Asian
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allele count: 1
allele frequency: 1.25093820365274e-4
allele num: 7994
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.505e1

FS
type: SiteQuality
SIO_000300: 5.635e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.13e-1

QD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.63e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 5.242922055225446e-4
allele num: 5722
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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Latino
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num of homozygotes: 0

Other
type: Population
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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VQSLOD
type: SiteQuality
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FS
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 15718
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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DP
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ClippingRankSum
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VQSLOD
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MQRankSum
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QD
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InbreedingCoeff
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FS
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BaseQRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5496
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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East Asian
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allele num: 7990
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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ClippingRankSum
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DP
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MQRankSum
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FS
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BaseQRankSum
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QD
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MQ
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7990
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5506
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.617814116710683e-5
allele num: 55282
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.261e0

DP
type: SiteQuality
SIO_000300: 1.376561e6

FS
type: SiteQuality
SIO_000300: 6.914e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.763e0

MQ
type: SiteQuality
SIO_000300: 4.685e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.35e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7988
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 5778
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.360513929525506e-5
allele num: 15722
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5518
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 55260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10450
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.119e0

DP
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

VQSLOD
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MQ
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SIO_000300: 4.908e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.29e-1

QD
type: SiteQuality
SIO_000300: 1.107e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10454
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.730103806228374e-4
allele num: 5780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5524
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 55374
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.575e0

ReadPosRankSum
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SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

MQ
type: SiteQuality
SIO_000300: 4.817e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.371563e6

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -2.148e0

BaseQRankSum
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SIO_000300: -2.502e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.804402742692169e-5
allele num: 55420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8014
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 4.793e1

FS
type: SiteQuality
SIO_000300: 6.039e0

VQSLOD
type: SiteQuality
SIO_000300: -1.742e0

DP
type: SiteQuality
SIO_000300: 1.36223e6

QD
type: SiteQuality
SIO_000300: 2.001e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15742
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5522
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.743448964312453e-4
allele num: 8014
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 55404
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.802e0

VQSLOD
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.028e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.34e-1

InbreedingCoeff
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SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 4.881e1

DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.068e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10472
num of homozygotes: 0

European (Non-Finnish)
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allele count: 10
allele frequency: 1.803621672318015e-4
allele num: 55444
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5522
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.730103806228374e-4
allele num: 5780
num of homozygotes: 0

Other
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East Asian
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allele frequency: 0.0e0
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South Asian
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FS
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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QD
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ClippingRankSum
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MQRankSum
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VQSLOD
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BaseQRankSum
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MQ
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DP
type: SiteQuality
SIO_000300: 1.355442e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 55372
num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
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MQ
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VQSLOD
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FS
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MQRankSum
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QD
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 10442
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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num of homozygotes: 0

East Asian
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European (Finnish)
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Other
type: Population
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FS
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VQSLOD
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: 4.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.157e1

DP
type: SiteQuality
SIO_000300: 1.350418e6

MQ
type: SiteQuality
SIO_000300: 4.665e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.59e0

GenotypeQuality
all individuals: 2154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55326
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.24595066035385e-4
allele num: 8026
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15742
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.057e0

DP
type: SiteQuality
SIO_000300: 1.346357e6

MQ
type: SiteQuality
SIO_000300: 4.256e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -1.034e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

FS
type: SiteQuality
SIO_000300: 1.574e0

QD
type: SiteQuality
SIO_000300: 1.01e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.807468459675379e-5
allele num: 55326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5744
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.352432981832041e-5
allele num: 15742
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8026
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

MQ
type: SiteQuality
SIO_000300: 4.256e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

FS
type: SiteQuality
SIO_000300: 1.574e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e0

VQSLOD
type: SiteQuality
SIO_000300: -2.057e0

DP
type: SiteQuality
SIO_000300: 1.346357e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: -1.034e0

QD
type: SiteQuality
SIO_000300: 1.01e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.740947075208914e-4
allele num: 5744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.810806895552658e-5
allele num: 55224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15730
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.772e0

DP
type: SiteQuality
SIO_000300: 1.347756e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.916e0

QD
type: SiteQuality
SIO_000300: 1.096e1

MQ
type: SiteQuality
SIO_000300: 4.637e1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4852
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5474
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.357279084551812e-5
allele num: 15730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8022
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.348138e6

MQRankSum
type: SiteQuality
SIO_000300: -1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQ
type: SiteQuality
SIO_000300: 4.74e1

QD
type: SiteQuality
SIO_000300: 1.744e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2079
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8032
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15748
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.80766449746927e-5
allele num: 55320
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10468
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.861e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.72e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.564e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.295e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.805901686712175e-5
allele num: 55374
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8040
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5784
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10478
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

DP
type: SiteQuality
SIO_000300: 1.346756e6

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 4.21e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.169e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8038
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.747640685075148e-4
allele num: 5722
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55310
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.146e1

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

FS
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -2.508e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.344086021505376e-3
allele num: 744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 33
allele frequency: 5.977827693645388e-4
allele num: 55204
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.861e0

MQ
type: SiteQuality
SIO_000300: 4.348e1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 1.347921e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.626e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1

FS
type: SiteQuality
SIO_000300: 9.76e-1

QD
type: SiteQuality
SIO_000300: 1.366e1

GenotypeQuality
all individuals: 1893
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5777
bin: 9.75e1
variant carriers: 22

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14086
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.271132579128003e-3
allele num: 15734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5730
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.556574923547401e-5
allele num: 10464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.813170873223093e-5
allele num: 55152
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

DP
type: SiteQuality
SIO_000300: 1.350234e6

QD
type: SiteQuality
SIO_000300: 1.286e1

VQSLOD
type: SiteQuality
SIO_000300: -1.818e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

MQ
type: SiteQuality
SIO_000300: 4.288e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 590
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15808
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.333333333333333e-3
allele num: 750
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.492e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.215e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

FS
type: SiteQuality
SIO_000300: 2.811e0

MQ
type: SiteQuality
SIO_000300: 4.024e1

QD
type: SiteQuality
SIO_000300: 7.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e-1

DP
type: SiteQuality
SIO_000300: 1.411746e6

GenotypeQuality
all individuals: 770
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 769
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variant carriers: 0

GenotypeQuality
all individuals: 2362
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.781641961231471e-5
allele num: 56128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5604
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.693193362682018e-4
allele num: 5906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.469e0

VQSLOD
type: SiteQuality
SIO_000300: -3.714e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

DP
type: SiteQuality
SIO_000300: 1.423894e6

MQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

MQ
type: SiteQuality
SIO_000300: 3.627e1

QD
type: SiteQuality
SIO_000300: 1.023e1

GenotypeQuality
all individuals: 857
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4490
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 429
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 779
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GenotypeQuality
all individuals: 2430
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8150
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.356287425149701e-5
allele num: 10688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15876
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.416e0

MQ
type: SiteQuality
SIO_000300: 3.831e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.996e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.78e-1

DP
type: SiteQuality
SIO_000300: 1.44905e6

QD
type: SiteQuality
SIO_000300: 1.832e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10918
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5848
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.724019033170126e-5
allele num: 58004
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.76e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.761e0

DP
type: SiteQuality
SIO_000300: 1.510103e6

MQRankSum
type: SiteQuality
SIO_000300: -5.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.267e0

VQSLOD
type: SiteQuality
SIO_000300: -6.407e0

MQ
type: SiteQuality
SIO_000300: 3.575e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.32e0

QD
type: SiteQuality
SIO_000300: 1.029e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2412
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.718035941311892e-5
allele num: 58206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16082
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.517188e6

MQRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 3.622e0

VQSLOD
type: SiteQuality
SIO_000300: -1.924e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQ
type: SiteQuality
SIO_000300: 4.502e1

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.277e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 655
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GenotypeQuality
all individuals: 5840
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.814552712756306e-4
allele num: 11022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5950
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 7.016e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.085e0

MQ
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SIO_000300: 3.588e1

QD
type: SiteQuality
SIO_000300: 1.552e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.78e-1

DP
type: SiteQuality
SIO_000300: 1.5288e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.702881275117499e-5
allele num: 58724
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8206
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.519756838905775e-4
allele num: 6580
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.5e-3

VQSLOD
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FS
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DP
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QD
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MQRankSum
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SIO_000300: -6.08e-1

ReadPosRankSum
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SIO_000300: -1.11e-1

ClippingRankSum
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BaseQRankSum
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SIO_000300: -3.619e0

MQ
type: SiteQuality
SIO_000300: 3.608e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11138
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 59252
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.461133839859731e-4
allele num: 6844
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-1

DP
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SIO_000300: 1.551941e6

MQRankSum
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SIO_000300: 4.51e-1

InbreedingCoeff
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BaseQRankSum
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MQ
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ClippingRankSum
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SIO_000300: -8.21e-1

QD
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SIO_000300: 1.311e1

VQSLOD
type: SiteQuality
SIO_000300: -3.041e0

FS
type: SiteQuality
SIO_000300: 3.059e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6152
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6844
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 59252
num of homozygotes: 0

Latino
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allele count: 1
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allele num: 11138
num of homozygotes: 0

Other
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MQ
type: SiteQuality
SIO_000300: 3.677e1

InbreedingCoeff
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VQSLOD
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FS
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QD
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ReadPosRankSum
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DP
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BaseQRankSum
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SIO_000300: -1.582e0

MQRankSum
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SIO_000300: 4.51e-1

ClippingRankSum
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SIO_000300: -8.21e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.373477718179671e-5
allele num: 59286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6868
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.971828458639871e-5
allele num: 11146
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8210
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6172
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -7.3e-2

ReadPosRankSum
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SIO_000300: 4.23e-1

MQ
type: SiteQuality
SIO_000300: 3.531e1

VQSLOD
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MQRankSum
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QD
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SIO_000300: 8.01e0

FS
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SIO_000300: 7.339e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
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SIO_000300: 1.553e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele num: 804
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.685658418178141e-5
allele num: 59324
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DP
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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QD
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MQ
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ReadPosRankSum
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VQSLOD
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FS
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ClippingRankSum
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BaseQRankSum
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SIO_000300: 5.41e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 1
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allele num: 11222
num of homozygotes: 0

European (Finnish)
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allele count: 0
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African
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 5.024620641141594e-5
allele num: 59706
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BaseQRankSum
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SIO_000300: -1.543e0

InbreedingCoeff
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FS
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QD
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MQ
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ClippingRankSum
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VQSLOD
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 19
allele frequency: 3.178533190578159e-4
allele num: 59776
num of homozygotes: 0

European (Finnish)
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African
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Latino
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allele frequency: 1.778726431874778e-4
allele num: 11244
num of homozygotes: 0

South Asian
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East Asian
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Other
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VQSLOD
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ClippingRankSum
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MQRankSum
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FS
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BaseQRankSum
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QD
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.217730150998539e-4
allele num: 8212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.829e0

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.273e0

MQRankSum
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SIO_000300: -1.32e0

MQ
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SIO_000300: 3.877e1

DP
type: SiteQuality
SIO_000300: 1.568858e6

QD
type: SiteQuality
SIO_000300: 8.800000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.43e-1

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.320987654320988e-4
allele num: 16200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6392
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.655e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 3.845e1

QD
type: SiteQuality
SIO_000300: 1.088e1

FS
type: SiteQuality
SIO_000300: 5.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

DP
type: SiteQuality
SIO_000300: 1.571279e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.331e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.172077521293668e-5
allele num: 16202
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.017e0

QD
type: SiteQuality
SIO_000300: 1.503e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.78e-1

FS
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SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.161e0

VQSLOD
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SIO_000300: -3.019e0

ReadPosRankSum
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SIO_000300: 1.69e0

MQ
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SIO_000300: 3.652e1

DP
type: SiteQuality
SIO_000300: 1.571887e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 57
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GenotypeQuality
all individuals: 8175
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.669449081803005e-5
allele num: 59900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.162e0

FS
type: SiteQuality
SIO_000300: 1.906e0

DP
type: SiteQuality
SIO_000300: 1.571735e6

QD
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: -3.707e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.744e0

MQ
type: SiteQuality
SIO_000300: 3.435e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2861
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.669170422300117e-5
allele num: 59910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16202
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.35795763172189e-4
allele num: 7364
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.86e-1

QD
type: SiteQuality
SIO_000300: 4.12e0

ReadPosRankSum
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SIO_000300: 1.9e0

DP
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SIO_000300: 1.571484e6

MQ
type: SiteQuality
SIO_000300: 3.308e1

VQSLOD
type: SiteQuality
SIO_000300: -3.446e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.338229403124583e-5
allele num: 59912
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.653190452995616e-4
allele num: 8212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

VQSLOD
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 5.600000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.572064e6

MQ
type: SiteQuality
SIO_000300: 3.772e1

QD
type: SiteQuality
SIO_000300: 9.9e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 5962
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.217730150998539e-4
allele num: 8212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11266
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.726e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

DP
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InbreedingCoeff
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SIO_000300: 4.9e-3

ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 1.4214e1

VQSLOD
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SIO_000300: -4.062e0

QD
type: SiteQuality
SIO_000300: 1.05e1

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

GenotypeQuality
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variant carriers: 122

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 72

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 214

GenotypeQuality
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variant carriers: 180

GenotypeQuality
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GenotypeQuality
all individuals: 388
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variant carriers: 223

GenotypeQuality
all individuals: 26909
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variant carriers: 162

GenotypeQuality
all individuals: 438
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variant carriers: 249

GenotypeQuality
all individuals: 1738
bin: 8.25e1
variant carriers: 113

South Asian
type: Population
allele count: 228
allele frequency: 1.423576423576424e-2
allele num: 16016
num of homozygotes: 9

East Asian
type: Population
allele count: 42
allele frequency: 5.124450951683748e-3
allele num: 8196
num of homozygotes: 0

African
type: Population
allele count: 1653
allele frequency: 2.422332942555686e-1
allele num: 6824
num of homozygotes: 361

Latino
type: Population
allele count: 177
allele frequency: 1.627436557557926e-2
allele num: 10876
num of homozygotes: 6

Other
type: Population
allele count: 33
allele frequency: 4.177215189873418e-2
allele num: 790
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 192
allele frequency: 3.122966818477554e-2
allele num: 6148
num of homozygotes: 6

European (Non-Finnish)
type: Population
allele count: 2099
allele frequency: 3.657814024815279e-2
allele num: 57384
num of homozygotes: 118

QD
type: SiteQuality
SIO_000300: 2.8e0

MQRankSum
type: SiteQuality
SIO_000300: -4.596e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.935e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.47e0

MQ
type: SiteQuality
SIO_000300: 3.642e1

FS
type: SiteQuality
SIO_000300: 2.7523e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

DP
type: SiteQuality
SIO_000300: 1.902675e6

GenotypeQuality
all individuals: 7938
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2132
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GenotypeQuality
all individuals: 143
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11280
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7778
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.326458652118954e-5
allele num: 60124
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.967e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-1

FS
type: SiteQuality
SIO_000300: 3.455e0

DP
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SIO_000300: 1.667916e6

QD
type: SiteQuality
SIO_000300: 1.251e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.133e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQ
type: SiteQuality
SIO_000300: 3.787e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 65
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GenotypeQuality
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variant carriers: 6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7772
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.468526289804986e-4
allele num: 16204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.865248226950355e-5
allele num: 11280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.663395322532353e-5
allele num: 60118
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.416e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

DP
type: SiteQuality
SIO_000300: 1.667168e6

QD
type: SiteQuality
SIO_000300: 1.279e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 5.26e-1

MQ
type: SiteQuality
SIO_000300: 3.831e1

MQRankSum
type: SiteQuality
SIO_000300: -3.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.093e0

GenotypeQuality
all individuals: 61
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8529
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variant carriers: 2

GenotypeQuality
all individuals: 2681
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.117206982543641e-4
allele num: 6416
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60108
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.381e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.736e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.166e0

QD
type: SiteQuality
SIO_000300: 1.186e1

DP
type: SiteQuality
SIO_000300: 1.666201e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e0

MQ
type: SiteQuality
SIO_000300: 3.685e1

GenotypeQuality
all individuals: 248
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variant carriers: 0

GenotypeQuality
all individuals: 257
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.663727414900343e-5
allele num: 60106
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7740
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.234263144902493e-4
allele num: 16204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-1

MQ
type: SiteQuality
SIO_000300: 3.776e1

VQSLOD
type: SiteQuality
SIO_000300: -2.892e0

QD
type: SiteQuality
SIO_000300: 1.173e1

DP
type: SiteQuality
SIO_000300: 1.665865e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 4.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 44
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.663672056964131e-5
allele num: 60108
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.292323597828896e-4
allele num: 7738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11274
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.85139471735374e-4
allele num: 16204
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e-1

InbreedingCoeff
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SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.011e0

DP
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SIO_000300: 1.665974e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-2

MQ
type: SiteQuality
SIO_000300: 3.676e1

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8532
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 1
allele frequency: 8.880994671403197e-5
allele num: 11260
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.329559832190184e-5
allele num: 60068
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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DP
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FS
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.322514065048769e-5
allele num: 60078
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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FS
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DP
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ReadPosRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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QD
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BaseQRankSum
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SIO_000300: 4.11e-1

GenotypeQuality
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GenotypeQuality
all individuals: 2669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7867
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2123
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3090
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27281
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8539
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1288
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.664946222237022e-4
allele num: 60062
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.96e-1

QD
type: SiteQuality
SIO_000300: 1.277e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.72e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 3.552e1

MQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.282e0

DP
type: SiteQuality
SIO_000300: 1.664234e6