11-3111802-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111802
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111802
    reference: chr 11
allele count: 1
allele frequency: 8.353102342209896e-6
allele num: 119716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1277G>A
  hgvsp: ENSP00000441551.1:p.Gly426Asp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2180G>A
  hgvsp: ENSP00000374639.3:p.Gly727Asp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.746G>A
  hgvsp: ENSP00000437141.1:p.Gly249Asp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2180G>A
  hgvsp: ENSP00000302872.8:p.Gly727Asp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1183G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.1043G>A
  hgvsp: ENSP00000431412.1:p.Gly348Asp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.151G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2384G>A
  hgvsp: ENSP00000263650.7:p.Gly795Asp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2117G>A
  hgvsp: ENSP00000433342.1:p.Gly706Asp
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23560
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly795Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

11-3111813-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111813
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111813
    reference: chr 11
allele count: 1
allele frequency: 8.350591221858508e-6
allele num: 119752
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2373G>A
  hgvsp: ENST00000263650.7:c.2373G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2169G>A
  hgvsp: ENST00000389989.3:c.2169G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2106G>A
  hgvsp: ENST00000525498.1:c.2106G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1172G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.1032G>A
  hgvsp: ENST00000534454.1:c.1032G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.735G>A
  hgvsp: ENST00000478260.1:c.735G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.140G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1266G>A
  hgvsp: ENST00000542243.1:c.1266G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2169G>A
  hgvsp: ENST00000348039.5:c.2169G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1483
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8333
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu791Glu
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

11-3111815-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111815
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111815
    reference: chr 11
allele count: 46
allele frequency: 3.841464433049956e-4
allele num: 119746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.1030G>A
  hgvsp: ENSP00000431412.1:p.Glu344Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.138G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2167G>A
  hgvsp: ENSP00000374639.3:p.Glu723Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2104G>A
  hgvsp: ENSP00000433342.1:p.Glu702Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2371G>A
  hgvsp: ENSP00000263650.7:p.Glu791Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1264G>A
  hgvsp: ENSP00000441551.1:p.Glu422Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.733G>A
  hgvsp: ENSP00000437141.1:p.Glu245Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1170G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2167G>A
  hgvsp: ENSP00000302872.8:p.Glu723Lys
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 23544
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 12100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2945
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8384
  bin: 9.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 1484
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu791Lys
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

11-3111816-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111816
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111816
    reference: chr 11
allele count: 1
allele frequency: 8.349336227769892e-6
allele num: 119770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2103C>T
  hgvsp: ENST00000525498.1:c.2103C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.137C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2370C>T
  hgvsp: ENST00000263650.7:c.2370C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2166C>T
  hgvsp: ENST00000348039.5:c.2166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1169C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2166C>T
  hgvsp: ENST00000389989.3:c.2166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.732C>T
  hgvsp: ENST00000478260.1:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.1029C>T
  hgvsp: ENST00000534454.1:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1263C>T
  hgvsp: ENST00000542243.1:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8333
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp790Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

11-3111816-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111816
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111816
    reference: chr 11
allele count: 1
allele frequency: 8.349336227769892e-6
allele num: 119770
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2166C>A
  hgvsp: ENSP00000374639.3:p.Asp722Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2166C>A
  hgvsp: ENSP00000302872.8:p.Asp722Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.137C>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2370C>A
  hgvsp: ENSP00000263650.7:p.Asp790Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1263C>A
  hgvsp: ENSP00000441551.1:p.Asp421Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1169C>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.732C>A
  hgvsp: ENSP00000437141.1:p.Asp244Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.1029C>A
  hgvsp: ENSP00000431412.1:p.Asp343Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2103C>A
  hgvsp: ENSP00000433342.1:p.Asp701Glu
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12127
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp790Glu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

11-3111837-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111837
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111837
    reference: chr 11
allele count: 1
allele frequency: 8.368200836820084e-6
allele num: 119500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2082G>A
  hgvsp: ENST00000525498.1:c.2082G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2145G>A
  hgvsp: ENST00000389989.3:c.2145G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.116G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1242G>A
  hgvsp: ENST00000542243.1:c.1242G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.711G>A
  hgvsp: ENST00000478260.1:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.1008G>A
  hgvsp: ENST00000534454.1:c.1008G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2145G>A
  hgvsp: ENST00000348039.5:c.2145G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1148G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2349G>A
  hgvsp: ENST00000263650.7:c.2349G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu783Glu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff

11-3111843-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111843
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111843
    reference: chr 11
allele count: 2
allele frequency: 1.677824197580577e-5
allele num: 119202
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2076G>A
  hgvsp: ENST00000525498.1:c.2076G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1236G>A
  hgvsp: ENST00000542243.1:c.1236G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.705G>A
  hgvsp: ENST00000478260.1:c.705G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2343G>A
  hgvsp: ENST00000263650.7:c.2343G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2139G>A
  hgvsp: ENST00000389989.3:c.2139G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.1002G>A
  hgvsp: ENST00000534454.1:c.1002G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2139G>A
  hgvsp: ENST00000348039.5:c.2139G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1142G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.110G>A
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2049
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr781Thr
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

11-3111844-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111844
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111844
    reference: chr 11
allele count: 4
allele frequency: 3.355254328278084e-5
allele num: 119216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1235C>T
  hgvsp: ENSP00000441551.1:p.Thr412Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2138C>T
  hgvsp: ENSP00000302872.8:p.Thr713Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.704C>T
  hgvsp: ENSP00000437141.1:p.Thr235Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.1001C>T
  hgvsp: ENSP00000431412.1:p.Thr334Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2075C>T
  hgvsp: ENSP00000433342.1:p.Thr692Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1141C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2138C>T
  hgvsp: ENSP00000374639.3:p.Thr713Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.109C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2342C>T
  hgvsp: ENSP00000263650.7:p.Thr781Met
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10123
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2922
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2041
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2904
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr781Met
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

11-3111846-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111846
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111846
    reference: chr 11
allele count: 70
allele frequency: 5.876723139177594e-4
allele num: 119114
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.107C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2073C>T
  hgvsp: ENST00000525498.1:c.2073C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.999C>T
  hgvsp: ENST00000534454.1:c.999C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2136C>T
  hgvsp: ENST00000348039.5:c.2136C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2340C>T
  hgvsp: ENST00000263650.7:c.2340C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2136C>T
  hgvsp: ENST00000389989.3:c.2136C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.702C>T
  hgvsp: ENST00000478260.1:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1139C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1233C>T
  hgvsp: ENST00000542243.1:c.1233C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 22770
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11922
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10060
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser780Ser
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-3111849-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111849
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111849
    reference: chr 11
allele count: 2
allele frequency: 1.68449423060726e-5
allele num: 118730
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2337A>G
  hgvsp: ENST00000263650.7:c.2337A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2133A>G
  hgvsp: ENST00000389989.3:c.2133A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.104A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2070A>G
  hgvsp: ENST00000525498.1:c.2070A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.699A>G
  hgvsp: ENST00000478260.1:c.699A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1136A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.996A>G
  hgvsp: ENST00000534454.1:c.996A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2133A>G
  hgvsp: ENST00000348039.5:c.2133A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1230A>G
  hgvsp: ENST00000542243.1:c.1230A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2018
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly779Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

11-3111850-C-CCGCTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111850
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111855
    reference: chr 11
allele count: 1
allele frequency: 8.422329279385507e-6
allele num: 118732
alternate allele: CCGCTG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2127_2131dupCAGCG
  hgvsp: ENSP00000302872.8:p.Gly711AlafsTer64
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.98_102dupCAGCG
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2127_2131dupCAGCG
  hgvsp: ENSP00000374639.3:p.Gly711AlafsTer64
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.990_994dupCAGCG
  hgvsp: ENSP00000431412.1:p.Gly332AlafsTer64
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.693_697dupCAGCG
  hgvsp: ENSP00000437141.1:p.Gly233AlafsTer64
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2331_2335dupCAGCG
  hgvsp: ENSP00000263650.7:p.Gly779AlafsTer64
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1130_*1134dupCAGCG
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2064_2068dupCAGCG
  hgvsp: ENSP00000433342.1:p.Gly690AlafsTer64
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1224_1228dupCAGCG
  hgvsp: ENSP00000441551.1:p.Gly410AlafsTer64
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2141
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8296
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7668
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly779AlafsTer64
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

11-3111851-C-CGCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111851
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111854
    reference: chr 11
allele count: 3
allele frequency: 2.527209623614247e-5
allele num: 118708
alternate allele: CGCT
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.694_696dupAGC
  hgvsp: ENSP00000437141.1:p.Ser232dup
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.99_101dupAGC
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2128_2130dupAGC
  hgvsp: ENSP00000374639.3:p.Ser710dup
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1225_1227dupAGC
  hgvsp: ENSP00000441551.1:p.Ser409dup
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1131_*1133dupAGC
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2128_2130dupAGC
  hgvsp: ENSP00000302872.8:p.Ser710dup
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2065_2067dupAGC
  hgvsp: ENSP00000433342.1:p.Ser689dup
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.991_993dupAGC
  hgvsp: ENSP00000431412.1:p.Ser331dup
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2332_2334dupAGC
  hgvsp: ENSP00000263650.7:p.Ser778dup
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22316
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2377
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser778dup
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

11-3111851-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111851
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111851
    reference: chr 11
allele count: 3
allele frequency: 2.527209623614247e-5
allele num: 118708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.994G>A
  hgvsp: ENSP00000431412.1:p.Gly332Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2131G>A
  hgvsp: ENSP00000374639.3:p.Gly711Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1228G>A
  hgvsp: ENSP00000441551.1:p.Gly410Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.102G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.697G>A
  hgvsp: ENSP00000437141.1:p.Gly233Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2131G>A
  hgvsp: ENSP00000302872.8:p.Gly711Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2068G>A
  hgvsp: ENSP00000433342.1:p.Gly690Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1134G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2335G>A
  hgvsp: ENSP00000263650.7:p.Gly779Arg
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8295
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2014
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly779Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

11-3111852-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111852
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111852
    reference: chr 11
allele count: 2
allele frequency: 1.685147113342995e-5
allele num: 118684
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.696C>T
  hgvsp: ENST00000478260.1:c.696C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2067C>T
  hgvsp: ENST00000525498.1:c.2067C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1227C>T
  hgvsp: ENST00000542243.1:c.1227C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.993C>T
  hgvsp: ENST00000534454.1:c.993C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1133C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2130C>T
  hgvsp: ENST00000348039.5:c.2130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.101C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2334C>T
  hgvsp: ENST00000263650.7:c.2334C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2130C>T
  hgvsp: ENST00000389989.3:c.2130C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9704
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12019
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7622
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30514
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser778Ser
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP

11-3111861-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111861
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111861
    reference: chr 11
allele count: 2
allele frequency: 1.693164694129798e-5
allele num: 118122
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.687G>A
  hgvsp: ENST00000478260.1:c.687G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.984G>A
  hgvsp: ENST00000534454.1:c.984G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2058G>A
  hgvsp: ENST00000525498.1:c.2058G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1124G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2121G>A
  hgvsp: ENST00000389989.3:c.2121G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2121G>A
  hgvsp: ENST00000348039.5:c.2121G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.92G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1218G>A
  hgvsp: ENST00000542243.1:c.1218G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2325G>A
  hgvsp: ENST00000263650.7:c.2325G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21498
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2303
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr775Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP

11-3111862-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111862
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111862
    reference: chr 11
allele count: 7
allele frequency: 5.927481497789896e-5
allele num: 118094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.91C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2324C>T
  hgvsp: ENSP00000263650.7:p.Thr775Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1217C>T
  hgvsp: ENSP00000441551.1:p.Thr406Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.686C>T
  hgvsp: ENSP00000437141.1:p.Thr229Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2120C>T
  hgvsp: ENSP00000302872.8:p.Thr707Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2120C>T
  hgvsp: ENSP00000374639.3:p.Thr707Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2057C>T
  hgvsp: ENSP00000433342.1:p.Thr686Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.983C>T
  hgvsp: ENSP00000431412.1:p.Thr328Met
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1123C>T
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21516
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8280
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1969
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr775Met
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-3111864-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111864
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111864
    reference: chr 11
allele count: 1
allele frequency: 8.47802495930548e-6
allele num: 117952
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1215C>T
  hgvsp: ENST00000542243.1:c.1215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.89C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2118C>T
  hgvsp: ENST00000389989.3:c.2118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2055C>T
  hgvsp: ENST00000525498.1:c.2055C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2322C>T
  hgvsp: ENST00000263650.7:c.2322C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.981C>T
  hgvsp: ENST00000534454.1:c.981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2118C>T
  hgvsp: ENST00000348039.5:c.2118C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.684C>T
  hgvsp: ENST00000478260.1:c.684C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1121C>T
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12780
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8931
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala774Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

11-3111866-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111866
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111866
    reference: chr 11
allele count: 23666
allele frequency: 2.016186743908673e-1
allele num: 117380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2116G>A
  hgvsp: ENSP00000374639.3:p.Ala706Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.87G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.979G>A
  hgvsp: ENSP00000431412.1:p.Ala327Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2116G>A
  hgvsp: ENSP00000302872.8:p.Ala706Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1119G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2320G>A
  hgvsp: ENSP00000263650.7:p.Ala774Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.682G>A
  hgvsp: ENSP00000437141.1:p.Ala228Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2053G>A
  hgvsp: ENSP00000433342.1:p.Ala685Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1213G>A
  hgvsp: ENSP00000441551.1:p.Ala405Thr
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 6.75e1
  variant carriers: 505
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 6.25e1
  variant carriers: 766
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 5.25e1
  variant carriers: 1445
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 1.25e1
  variant carriers: 412
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 1060
genotype depth: GenotypeDepth
  all individuals: 20541
  bin: 2.75e1
  variant carriers: 2228
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 252
genotype depth: GenotypeDepth
  all individuals: 11226
  bin: 2.25e1
  variant carriers: 1391
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 3.75e1
  variant carriers: 2886
genotype depth: GenotypeDepth
  all individuals: 8541
  bin: 3.25e1
  variant carriers: 2744
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 4.25e1
  variant carriers: 2602
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 7.5e0
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.25e1
  variant carriers: 432
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 2.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 1.75e1
  variant carriers: 779
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 261
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.25e1
  variant carriers: 168
genotype depth: GenotypeDepth
  all individuals: 2257
  bin: 4.75e1
  variant carriers: 2118
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 601
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.75e1
  variant carriers: 372
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.5e0
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.75e1
  variant carriers: 44
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 3.25e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.75e1
  variant carriers: 23
hgvs: p.Ala774Thr
num of homozygotes: 2705
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

11-3111868-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111868
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111868
    reference: chr 11
allele count: 1
allele frequency: 8.609853115905842e-6
allele num: 116146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1211A>G
  hgvsp: ENSP00000441551.1:p.Gln404Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.680A>G
  hgvsp: ENSP00000437141.1:p.Gln227Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2114A>G
  hgvsp: ENSP00000374639.3:p.Gln705Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2318A>G
  hgvsp: ENSP00000263650.7:p.Gln773Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2051A>G
  hgvsp: ENSP00000433342.1:p.Gln684Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.977A>G
  hgvsp: ENSP00000431412.1:p.Gln326Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2114A>G
  hgvsp: ENSP00000302872.8:p.Gln705Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1117A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.85A>G
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14140
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gln773Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

11-3111870-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111870
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111870
    reference: chr 11
allele count: 1
allele frequency: 8.663559336717898e-6
allele num: 115426
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.83C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2112C>G
  hgvsp: ENSP00000302872.8:p.Ser704Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2049C>G
  hgvsp: ENSP00000433342.1:p.Ser683Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1115C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2112C>G
  hgvsp: ENSP00000374639.3:p.Ser704Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1209C>G
  hgvsp: ENSP00000441551.1:p.Ser403Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.975C>G
  hgvsp: ENSP00000431412.1:p.Ser325Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2316C>G
  hgvsp: ENSP00000263650.7:p.Ser772Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.678C>G
  hgvsp: ENSP00000437141.1:p.Ser226Arg
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4674
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser772Arg
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

11-3111878-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111878
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111878
    reference: chr 11
allele count: 12
allele frequency: 1.0547966879384e-4
allele num: 113766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.670G>A
  hgvsp: ENSP00000437141.1:p.Gly224Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2041G>A
  hgvsp: ENSP00000433342.1:p.Gly681Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.967G>A
  hgvsp: ENSP00000431412.1:p.Gly323Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.75G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2104G>A
  hgvsp: ENSP00000374639.3:p.Gly702Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2104G>A
  hgvsp: ENSP00000302872.8:p.Gly702Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1201G>A
  hgvsp: ENSP00000441551.1:p.Gly401Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1107G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2308G>A
  hgvsp: ENSP00000263650.7:p.Gly770Ser
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26739
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7845
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14561
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7680
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1680
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly770Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

11-3111879-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111879
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111879
    reference: chr 11
allele count: 6
allele frequency: 5.288486963879634e-5
allele num: 113454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.74C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1200C>T
  hgvsp: ENST00000542243.1:c.1200C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2103C>T
  hgvsp: ENST00000348039.5:c.2103C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.966C>T
  hgvsp: ENST00000534454.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2103C>T
  hgvsp: ENST00000389989.3:c.2103C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1106C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2307C>T
  hgvsp: ENST00000263650.7:c.2307C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2040C>T
  hgvsp: ENST00000525498.1:c.2040C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.669C>T
  hgvsp: ENST00000478260.1:c.669C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26607
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser769Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

11-3111890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111890
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111890
    reference: chr 11
allele count: 1
allele frequency: 9.145114679738084e-6
allele num: 109348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2092G>A
  hgvsp: ENSP00000374639.3:p.Asp698Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1189G>A
  hgvsp: ENSP00000441551.1:p.Asp397Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.658G>A
  hgvsp: ENSP00000437141.1:p.Asp220Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2029G>A
  hgvsp: ENSP00000433342.1:p.Asp677Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1095G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.63G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.955G>A
  hgvsp: ENSP00000431412.1:p.Asp319Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2296G>A
  hgvsp: ENSP00000263650.7:p.Asp766Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2092G>A
  hgvsp: ENSP00000302872.8:p.Asp698Asn
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4865
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23586
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp766Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

11-3111891-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111891
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111891
    reference: chr 11
allele count: 1
allele frequency: 9.236851342114501e-6
allele num: 108262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2028C>T
  hgvsp: ENST00000525498.1:c.2028C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.62C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2091C>T
  hgvsp: ENST00000348039.5:c.2091C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2295C>T
  hgvsp: ENST00000263650.7:c.2295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.657C>T
  hgvsp: ENST00000478260.1:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1188C>T
  hgvsp: ENST00000542243.1:c.1188C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2091C>T
  hgvsp: ENST00000389989.3:c.2091C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1094C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.954C>T
  hgvsp: ENST00000534454.1:c.954C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9224
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1015
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ser765Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

11-3111891-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111891
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111891
    reference: chr 11
allele count: 2
allele frequency: 1.8473702684229e-5
allele num: 108262
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2295C>G
  hgvsp: ENSP00000263650.7:p.Ser765Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2091C>G
  hgvsp: ENSP00000374639.3:p.Ser697Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.62C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.954C>G
  hgvsp: ENSP00000431412.1:p.Ser318Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1094C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1188C>G
  hgvsp: ENSP00000441551.1:p.Ser396Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.657C>G
  hgvsp: ENSP00000437141.1:p.Ser219Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2091C>G
  hgvsp: ENSP00000302872.8:p.Ser697Arg
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2028C>G
  hgvsp: ENSP00000433342.1:p.Ser676Arg
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22858
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser765Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

11-3111892-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111892
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111892
    reference: chr 11
allele count: 1
allele frequency: 9.23122369101248e-6
allele num: 108328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2090G>A
  hgvsp: ENSP00000374639.3:p.Ser697Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.953G>A
  hgvsp: ENSP00000431412.1:p.Ser318Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2027G>A
  hgvsp: ENSP00000433342.1:p.Ser676Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1093G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.656G>A
  hgvsp: ENSP00000437141.1:p.Ser219Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1187G>A
  hgvsp: ENSP00000441551.1:p.Ser396Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2090G>A
  hgvsp: ENSP00000302872.8:p.Ser697Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2294G>A
  hgvsp: ENSP00000263650.7:p.Ser765Asn
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.61G>A
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22918
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15084
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5355
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9318
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1213
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser765Asn
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

11-3111894-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111894
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111894
    reference: chr 11
allele count: 1
allele frequency: 9.286775631500742e-6
allele num: 107680
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2088C>T
  hgvsp: ENST00000348039.5:c.2088C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2292C>T
  hgvsp: ENST00000263650.7:c.2292C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1185C>T
  hgvsp: ENST00000542243.1:c.1185C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2025C>T
  hgvsp: ENST00000525498.1:c.2025C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.654C>T
  hgvsp: ENST00000478260.1:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.951C>T
  hgvsp: ENST00000534454.1:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1091C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.59C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2088C>T
  hgvsp: ENST00000389989.3:c.2088C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14959
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6329
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala764Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD

11-3111895-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111895
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111895
    reference: chr 11
allele count: 3
allele frequency: 2.872792737579959e-5
allele num: 104428
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1184C>G
  hgvsp: ENSP00000441551.1:p.Ala395Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.950C>G
  hgvsp: ENSP00000431412.1:p.Ala317Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2087C>G
  hgvsp: ENSP00000374639.3:p.Ala696Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.653C>G
  hgvsp: ENSP00000437141.1:p.Ala218Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2087C>G
  hgvsp: ENSP00000302872.8:p.Ala696Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1090C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2291C>G
  hgvsp: ENSP00000263650.7:p.Ala764Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.58C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2024C>G
  hgvsp: ENSP00000433342.1:p.Ala675Gly
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21342
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala764Gly
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

11-3111896-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111896
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111896
    reference: chr 11
allele count: 3
allele frequency: 2.8668628875043e-5
allele num: 104644
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1183G>A
  hgvsp: ENSP00000441551.1:p.Ala395Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2023G>A
  hgvsp: ENSP00000433342.1:p.Ala675Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.949G>A
  hgvsp: ENSP00000431412.1:p.Ala317Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2086G>A
  hgvsp: ENSP00000302872.8:p.Ala696Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.57G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1089G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.652G>A
  hgvsp: ENSP00000437141.1:p.Ala218Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2086G>A
  hgvsp: ENSP00000374639.3:p.Ala696Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2290G>A
  hgvsp: ENSP00000263650.7:p.Ala764Thr
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15071
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21261
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala764Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

11-3111900-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111900
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111900
    reference: chr 11
allele count: 1
allele frequency: 9.564801530368245e-6
allele num: 104550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1085C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.945C>T
  hgvsp: ENST00000534454.1:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1179C>T
  hgvsp: ENST00000542243.1:c.1179C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2019C>T
  hgvsp: ENST00000525498.1:c.2019C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2286C>T
  hgvsp: ENST00000263650.7:c.2286C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2082C>T
  hgvsp: ENST00000348039.5:c.2082C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2082C>T
  hgvsp: ENST00000389989.3:c.2082C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.53C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.648C>T
  hgvsp: ENST00000478260.1:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6754
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7646
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11418
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg762Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

11-3111901-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111901
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111901
    reference: chr 11
allele count: 1
allele frequency: 9.615569530183273e-6
allele num: 103998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1084G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1178G>A
  hgvsp: ENSP00000441551.1:p.Arg393His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.647G>A
  hgvsp: ENSP00000437141.1:p.Arg216His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.944G>A
  hgvsp: ENSP00000431412.1:p.Arg315His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2018G>A
  hgvsp: ENSP00000433342.1:p.Arg673His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2081G>A
  hgvsp: ENSP00000374639.3:p.Arg694His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2081G>A
  hgvsp: ENSP00000302872.8:p.Arg694His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.52G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2285G>A
  hgvsp: ENSP00000263650.7:p.Arg762His
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1617
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg762His
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

11-3111902-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111902
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111902
    reference: chr 11
allele count: 5
allele frequency: 4.880048410080228e-5
allele num: 102458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2017C>T
  hgvsp: ENSP00000433342.1:p.Arg673Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2080C>T
  hgvsp: ENSP00000302872.8:p.Arg694Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.51C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2080C>T
  hgvsp: ENSP00000374639.3:p.Arg694Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.943C>T
  hgvsp: ENSP00000431412.1:p.Arg315Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2284C>T
  hgvsp: ENSP00000263650.7:p.Arg762Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1177C>T
  hgvsp: ENSP00000441551.1:p.Arg393Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1083C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.646C>T
  hgvsp: ENSP00000437141.1:p.Arg216Cys
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7149
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8113
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15713
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20041
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4960
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg762Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

11-3111907-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111907
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111907
    reference: chr 11
allele count: 1
allele frequency: 9.639297487999075e-6
allele num: 103742
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2012G>A
  hgvsp: ENSP00000433342.1:p.Arg671Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2279G>A
  hgvsp: ENSP00000263650.7:p.Arg760Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.641G>A
  hgvsp: ENSP00000437141.1:p.Arg214Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2075G>A
  hgvsp: ENSP00000302872.8:p.Arg692Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2075G>A
  hgvsp: ENSP00000374639.3:p.Arg692Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1078G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.938G>A
  hgvsp: ENSP00000431412.1:p.Arg313Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.46G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1172G>A
  hgvsp: ENSP00000441551.1:p.Arg391Gln
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1450
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg760Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ

11-3111908-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111908
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111908
    reference: chr 11
allele count: 1
allele frequency: 9.761049508043105e-6
allele num: 102448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.45C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2278C>T
  hgvsp: ENSP00000263650.7:p.Arg760Trp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2074C>T
  hgvsp: ENSP00000302872.8:p.Arg692Trp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.937C>T
  hgvsp: ENSP00000431412.1:p.Arg313Trp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.640C>T
  hgvsp: ENSP00000437141.1:p.Arg214Trp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2011C>T
  hgvsp: ENSP00000433342.1:p.Arg671Trp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2074C>T
  hgvsp: ENSP00000374639.3:p.Arg692Trp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1171C>T
  hgvsp: ENSP00000441551.1:p.Arg391Trp
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1077C>T
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9785
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15523
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg760Trp
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

11-3111913-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111913
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111913
    reference: chr 11
allele count: 5
allele frequency: 4.94598979147707e-5
allele num: 101092
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.932A>G
  hgvsp: ENSP00000431412.1:p.Asp311Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.635A>G
  hgvsp: ENSP00000437141.1:p.Asp212Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.40A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1072A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2069A>G
  hgvsp: ENSP00000374639.3:p.Asp690Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1166A>G
  hgvsp: ENSP00000441551.1:p.Asp389Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.2006A>G
  hgvsp: ENSP00000433342.1:p.Asp669Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2069A>G
  hgvsp: ENSP00000302872.8:p.Asp690Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2273A>G
  hgvsp: ENSP00000263650.7:p.Asp758Gly
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15103
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10980
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17680
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9006
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3716
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp758Gly
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

11-3111920-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111920
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111920
    reference: chr 11
allele count: 1
allele frequency: 1.04331858776396e-5
allele num: 95848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1999G>A
  hgvsp: ENSP00000433342.1:p.Gly667Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.925G>A
  hgvsp: ENSP00000431412.1:p.Gly309Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1065G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.628G>A
  hgvsp: ENSP00000437141.1:p.Gly210Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2062G>A
  hgvsp: ENSP00000374639.3:p.Gly688Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.33G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1159G>A
  hgvsp: ENSP00000441551.1:p.Gly387Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2266G>A
  hgvsp: ENSP00000263650.7:p.Gly756Ser
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2062G>A
  hgvsp: ENSP00000302872.8:p.Gly688Ser
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12268
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly756Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

11-3111930-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111930
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111930
    reference: chr 11
allele count: 1
allele frequency: 1.083024671302012e-5
allele num: 92334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-4G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-4G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-4G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-4G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-4G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-4G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.23G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-4G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-4G>A
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10701
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25487
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 3.25e1
  variant carriers: 0
hgvs: c.2260-4G>A
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

11-3111934-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111934
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111934
    reference: chr 11
allele count: 2
allele frequency: 2.212878955521133e-5
allele num: 90380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-8C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-8C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-8C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-8C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-8C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-8C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.19C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-8C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-8C>T
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19615
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
hgvs: c.2260-8C>T
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

11-3111934-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111934
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111934
    reference: chr 11
allele count: 3
allele frequency: 3.319318433281699e-5
allele num: 90380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-8C>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-8C>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-8C>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-8C>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-8C>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.19C>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-8C>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-8C>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-8C>A
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19615
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9154
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3255
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 7.75e1
  variant carriers: 0
hgvs: c.2260-8C>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

11-3111940-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111940
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111940
    reference: chr 11
allele count: 1
allele frequency: 1.146578609429462e-5
allele num: 87216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-14C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-14C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-14C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-14C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.13C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-14C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-14C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-14C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-14C>T
  variant of: http://identifiers.org/hgnc/16392
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6472
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14342
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-3111942-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111942
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111942
    reference: chr 11
allele count: 1
allele frequency: 1.193317422434368e-5
allele num: 83800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-16C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-16C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.11C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-16C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-16C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-16C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-16C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-16C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-16C>T
  variant of: http://identifiers.org/hgnc/16392
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15001
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/11-3111946-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111946
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111946
    reference: chr 11
allele count: 1
allele frequency: 1.204906378774369e-5
allele num: 82994
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.7G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-20G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-20G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-20G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-20G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-20G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-20G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-20G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-20G>T
  variant of: http://identifiers.org/hgnc/16392
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24997
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9782
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 701
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD

11-3111951-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111951
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111951
    reference: chr 11
allele count: 1
allele frequency: 1.256786647898653e-5
allele num: 79568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-25C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000021762
  ensembl transcript: ENST00000498536
  gene symbol: OSBPL5
  hgvsc: ENST00000498536.1:n.2C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-25C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-25C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-25C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-25C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-25C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-25C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-25C>G
  variant of: http://identifiers.org/hgnc/16392
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4480
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7064
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4337
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/11-3111961-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111961
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111960
    reference: chr 11
allele count: 1
allele frequency: 1.470112610625974e-5
allele num: 68022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-36delG
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-36delG
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-36delG
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-36delG
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-36delG
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-36delG
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-36delG
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-36delG
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24466
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18885
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2679
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5314
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: AC
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

11-3111963-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111963
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111963
    reference: chr 11
allele count: 1
allele frequency: 1.517680983457277e-5
allele num: 65890
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-37G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-37G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-37G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-37G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-37G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-37G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-37G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-37G>A
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6135
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23585
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19740
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8399
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3346
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

11-3111966-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111966
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111966
    reference: chr 11
allele count: 45
allele frequency: 7.458233890214797e-4
allele num: 60336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-40G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-40G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-40G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-40G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-40G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-40G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-40G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-40G>A
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21968
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6273
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21447
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 9.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4499
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4404
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

11-3111967-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111967
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111967
    reference: chr 11
allele count: 2
allele frequency: 3.429237680463633e-5
allele num: 58322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-41C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-41C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-41C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-41C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-41C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-41C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-41C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-41C>T
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7245
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20884
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9286
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4847
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/11-3111968-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111968
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111968
    reference: chr 11
allele count: 6
allele frequency: 1.02082482645978e-4
allele num: 58776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-42G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-42G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-42G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-42G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-42G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-42G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-42G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-42G>T
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20809
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22870
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2582
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23536
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5285
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9343
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

11-3111968-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111968
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111968
    reference: chr 11
allele count: 2
allele frequency: 3.402749421532598e-5
allele num: 58776
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-42G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-42G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-42G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-42G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-42G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-42G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-42G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-42G>A
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20809
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22870
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4787
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2582
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/11-3111976-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3111976
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3111976
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 48652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1059-50G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1153-50G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.622-50G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.919-50G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2260-50G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1993-50G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2056-50G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2056-50G>T
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26060
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7500
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5493
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17854
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4770
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5209
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9030
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

11-3113617-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113617
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113617
    reference: chr 11
allele count: 1
allele frequency: 2.327855114297686e-5
allele num: 42958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.621+45G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2055+45G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.918+45G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1992+45G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2259+45G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1058+45G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2055+45G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1152+45G>A
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8620
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29571
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7339
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-3113618-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113618
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113618
    reference: chr 11
allele count: 125
allele frequency: 2.918378782218902e-3
allele num: 42832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2055+44C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.621+44C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2055+44C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.918+44C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1152+44C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1058+44C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2259+44C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1992+44C>T
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 1.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8650
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13865
  bin: 1.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29579
  bin: 7.5e0
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 8.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 3661
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7433
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3522
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 28613
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 2
population: Other
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/11-3113634-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113634
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113634
    reference: chr 11
allele count: 1
allele frequency: 2.384813507583707e-5
allele num: 41932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1992+28G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2259+28G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1152+28G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.918+28G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.621+28G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2055+28G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2055+28G>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1058+28G>T
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13683
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

11-3113649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113649
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113649
    reference: chr 11
allele count: 1
allele frequency: 2.443195699975568e-5
allele num: 40930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1152+13C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.621+13C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2259+13C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2055+13C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.918+13C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1058+13C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2055+13C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1992+13C>T
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8848
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30259
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3478
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1951
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8661
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3195
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

11-3113650-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113650
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113650
    reference: chr 11
allele count: 56
allele frequency: 1.365787034778791e-3
allele num: 41002
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2259+12A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1152+12A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2055+12A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1992+12A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.621+12A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1058+12A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.918+12A>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2055+12A>G
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 30296
  bin: 7.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3582
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13140
  bin: 1.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8783
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 9.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 2343
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8636
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 32729
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 4.25e1
  variant carriers: 3
num of homozygotes: 2
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-3113659-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113659
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113659
    reference: chr 11
allele count: 5
allele frequency: 1.233654083395016e-4
allele num: 40530
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1058+3C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.621+3C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2259+3C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1992+3C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2055+3C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.918+3C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1152+3C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2055+3C>G
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12738
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29992
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9306
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1904
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32612
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
hgvs: c.2259+3C>G
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

11-3113664-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113664
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113664
    reference: chr 11
allele count: 1
allele frequency: 2.523850386149109e-5
allele num: 39622
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2053G>C
  hgvsp: ENSP00000302872.8:p.Glu685Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.916G>C
  hgvsp: ENSP00000431412.1:p.Glu306Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.619G>C
  hgvsp: ENSP00000437141.1:p.Glu207Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2257G>C
  hgvsp: ENSP00000263650.7:p.Glu753Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2053G>C
  hgvsp: ENSP00000374639.3:p.Glu685Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1150G>C
  hgvsp: ENSP00000441551.1:p.Glu384Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1990G>C
  hgvsp: ENSP00000433342.1:p.Glu664Gln
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1056G>C
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29486
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12515
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10022
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3202
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu753Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

11-3113664-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113664
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113664
    reference: chr 11
allele count: 3
allele frequency: 7.571551158447327e-5
allele num: 39622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2053G>A
  hgvsp: ENSP00000374639.3:p.Glu685Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2257G>A
  hgvsp: ENSP00000263650.7:p.Glu753Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.619G>A
  hgvsp: ENSP00000437141.1:p.Glu207Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1150G>A
  hgvsp: ENSP00000441551.1:p.Glu384Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.916G>A
  hgvsp: ENSP00000431412.1:p.Glu306Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2053G>A
  hgvsp: ENSP00000302872.8:p.Glu685Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1990G>A
  hgvsp: ENSP00000433342.1:p.Glu664Lys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1056G>A
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29486
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12515
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30869
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu753Lys
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

11-3113665-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113665
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113665
    reference: chr 11
allele count: 11
allele frequency: 2.751513332332783e-4
allele num: 39978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2052C>T
  hgvsp: ENST00000348039.5:c.2052C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1055C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.618C>T
  hgvsp: ENST00000478260.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.915C>T
  hgvsp: ENST00000534454.1:c.915C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2052C>T
  hgvsp: ENST00000389989.3:c.2052C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1989C>T
  hgvsp: ENST00000525498.1:c.1989C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1149C>T
  hgvsp: ENST00000542243.1:c.1149C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2256C>T
  hgvsp: ENST00000263650.7:c.2256C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9931
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29503
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12421
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10017
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2649
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His752His
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

11-3113667-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113667
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113667
    reference: chr 11
allele count: 1
allele frequency: 2.506391297809414e-5
allele num: 39898
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2050C>T
  hgvsp: ENSP00000374639.3:p.His684Tyr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2050C>T
  hgvsp: ENSP00000302872.8:p.His684Tyr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1987C>T
  hgvsp: ENSP00000433342.1:p.His663Tyr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.913C>T
  hgvsp: ENSP00000431412.1:p.His305Tyr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1053C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1147C>T
  hgvsp: ENSP00000441551.1:p.His383Tyr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.616C>T
  hgvsp: ENSP00000437141.1:p.His206Tyr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2254C>T
  hgvsp: ENSP00000263650.7:p.His752Tyr
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12317
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4190
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 7.75e1
  variant carriers: 0
hgvs: p.His752Tyr
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

11-3113669-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113669
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113669
    reference: chr 11
allele count: 1
allele frequency: 2.581844469689146e-5
allele num: 38732
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2048G>C
  hgvsp: ENSP00000302872.8:p.Arg683Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.614G>C
  hgvsp: ENSP00000437141.1:p.Arg205Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1051G>C
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1145G>C
  hgvsp: ENSP00000441551.1:p.Arg382Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.911G>C
  hgvsp: ENSP00000431412.1:p.Arg304Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2048G>C
  hgvsp: ENSP00000374639.3:p.Arg683Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1985G>C
  hgvsp: ENSP00000433342.1:p.Arg662Thr
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2252G>C
  hgvsp: ENSP00000263650.7:p.Arg751Thr
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10701
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12009
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10801
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29566
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg751Thr
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-3113675-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113675
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113675
    reference: chr 11
allele count: 3
allele frequency: 7.92895654931811e-5
allele num: 37836
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1979G>A
  hgvsp: ENSP00000433342.1:p.Gly660Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.905G>A
  hgvsp: ENSP00000431412.1:p.Gly302Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2042G>A
  hgvsp: ENSP00000374639.3:p.Gly681Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2042G>A
  hgvsp: ENSP00000302872.8:p.Gly681Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2246G>A
  hgvsp: ENSP00000263650.7:p.Gly749Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1045G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.608G>A
  hgvsp: ENSP00000437141.1:p.Gly203Glu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1139G>A
  hgvsp: ENSP00000441551.1:p.Gly380Glu
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29308
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11183
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2555
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28909
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2133
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11263
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly749Glu
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD

11-3113683-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113683
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113683
    reference: chr 11
allele count: 1
allele frequency: 2.684131415074082e-5
allele num: 37256
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2238C>G
  hgvsp: ENST00000263650.7:c.2238C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1131C>G
  hgvsp: ENST00000542243.1:c.1131C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.600C>G
  hgvsp: ENST00000478260.1:c.600C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2034C>G
  hgvsp: ENST00000348039.5:c.2034C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.897C>G
  hgvsp: ENST00000534454.1:c.897C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2034C>G
  hgvsp: ENST00000389989.3:c.2034C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1971C>G
  hgvsp: ENST00000525498.1:c.1971C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1037C>G
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11700
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2274
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1818
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly746Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

11-3113691-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113691
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113691
    reference: chr 11
allele count: 1
allele frequency: 2.701534471579857e-5
allele num: 37016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2026T>C
  hgvsp: ENSP00000302872.8:p.Phe676Leu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1963T>C
  hgvsp: ENSP00000433342.1:p.Phe655Leu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.592T>C
  hgvsp: ENSP00000437141.1:p.Phe198Leu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1123T>C
  hgvsp: ENSP00000441551.1:p.Phe375Leu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2230T>C
  hgvsp: ENSP00000263650.7:p.Phe744Leu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2026T>C
  hgvsp: ENSP00000374639.3:p.Phe676Leu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.889T>C
  hgvsp: ENSP00000431412.1:p.Phe297Leu
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1029T>C
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12468
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9565
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1633
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Phe744Leu
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-3113693-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113693
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113693
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 36364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1027C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1121C>T
  hgvsp: ENSP00000441551.1:p.Thr374Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.887C>T
  hgvsp: ENSP00000431412.1:p.Thr296Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.590C>T
  hgvsp: ENSP00000437141.1:p.Thr197Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1961C>T
  hgvsp: ENSP00000433342.1:p.Thr654Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2024C>T
  hgvsp: ENSP00000374639.3:p.Thr675Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2228C>T
  hgvsp: ENSP00000263650.7:p.Thr743Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2024C>T
  hgvsp: ENSP00000302872.8:p.Thr675Ile
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12825
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28329
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25428
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4075
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr743Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-3113695-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113695
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113695
    reference: chr 11
allele count: 1
allele frequency: 2.792828017650673e-5
allele num: 35806
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1959C>G
  hgvsp: ENST00000525498.1:c.1959C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2022C>G
  hgvsp: ENST00000348039.5:c.2022C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.588C>G
  hgvsp: ENST00000478260.1:c.588C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.885C>G
  hgvsp: ENST00000534454.1:c.885C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2022C>G
  hgvsp: ENST00000389989.3:c.2022C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1119C>G
  hgvsp: ENST00000542243.1:c.1119C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2226C>G
  hgvsp: ENST00000263650.7:c.2226C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1025C>G
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9049
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13059
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5895
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr742Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

11-3113696-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113696
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113696
    reference: chr 11
allele count: 259
allele frequency: 7.176900908889381e-3
allele num: 36088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1024C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2021C>T
  hgvsp: ENSP00000302872.8:p.Thr674Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1958C>T
  hgvsp: ENSP00000433342.1:p.Thr653Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1118C>T
  hgvsp: ENSP00000441551.1:p.Thr373Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2225C>T
  hgvsp: ENSP00000263650.7:p.Thr742Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.587C>T
  hgvsp: ENSP00000437141.1:p.Thr196Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2021C>T
  hgvsp: ENSP00000374639.3:p.Thr674Ile
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.884C>T
  hgvsp: ENSP00000431412.1:p.Thr295Ile
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 1.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13029
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9060
  bin: 1.25e1
  variant carriers: 153
genotype depth: GenotypeDepth
  all individuals: 28186
  bin: 7.5e0
  variant carriers: 160
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 3.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 9.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 8.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 13192
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 5981
  bin: 6.25e1
  variant carriers: 16
hgvs: p.Thr742Ile
num of homozygotes: 3
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

11-3113702-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113702
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113702
    reference: chr 11
allele count: 1
allele frequency: 2.955956251847473e-5
allele num: 33830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1112G>A
  hgvsp: ENSP00000441551.1:p.Arg371His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1952G>A
  hgvsp: ENSP00000433342.1:p.Arg651His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1018G>A
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.878G>A
  hgvsp: ENSP00000431412.1:p.Arg293His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2015G>A
  hgvsp: ENSP00000302872.8:p.Arg672His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2015G>A
  hgvsp: ENSP00000374639.3:p.Arg672His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.581G>A
  hgvsp: ENSP00000437141.1:p.Arg194His
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2219G>A
  hgvsp: ENSP00000263650.7:p.Arg740His
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4992
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8229
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28475
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1584
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg740His
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

11-3113703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113703
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113703
    reference: chr 11
allele count: 14
allele frequency: 4.081870663012421e-4
allele num: 34298
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.877C>T
  hgvsp: ENSP00000431412.1:p.Arg293Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1017C>T
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1951C>T
  hgvsp: ENSP00000433342.1:p.Arg651Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1111C>T
  hgvsp: ENSP00000441551.1:p.Arg371Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2014C>T
  hgvsp: ENSP00000302872.8:p.Arg672Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2014C>T
  hgvsp: ENSP00000374639.3:p.Arg672Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.580C>T
  hgvsp: ENSP00000437141.1:p.Arg194Cys
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2218C>T
  hgvsp: ENSP00000263650.7:p.Arg740Cys
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13433
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28605
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8120
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1451
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4176
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Arg740Cys
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

11-3113705-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 3113705
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 3113705
    reference: chr 11
allele count: 1
allele frequency: 2.933411557641537e-5
allele num: 34090
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000434265
  ensembl transcript: ENST00000471998
  gene symbol: OSBPL5
  hgvsc: ENST00000471998.2:c.*1015C>G
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000263650
  ensembl transcript: ENST00000263650
  gene symbol: OSBPL5
  hgvsc: ENST00000263650.7:c.2216C>G
  hgvsp: ENSP00000263650.7:p.Ala739Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000302872
  ensembl transcript: ENST00000348039
  gene symbol: OSBPL5
  hgvsc: ENST00000348039.5:c.2012C>G
  hgvsp: ENSP00000302872.8:p.Ala671Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000441551
  ensembl transcript: ENST00000542243
  gene symbol: OSBPL5
  hgvsc: ENST00000542243.1:c.1109C>G
  hgvsp: ENSP00000441551.1:p.Ala370Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000431412
  ensembl transcript: ENST00000534454
  gene symbol: OSBPL5
  hgvsc: ENST00000534454.1:c.875C>G
  hgvsp: ENSP00000431412.1:p.Ala292Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000437141
  ensembl transcript: ENST00000478260
  gene symbol: OSBPL5
  hgvsc: ENST00000478260.1:c.578C>G
  hgvsp: ENSP00000437141.1:p.Ala193Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000374639
  ensembl transcript: ENST00000389989
  gene symbol: OSBPL5
  hgvsc: ENST00000389989.3:c.2012C>G
  hgvsp: ENSP00000374639.3:p.Ala671Gly
  variant of: http://identifiers.org/hgnc/16392
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000021762
  ensembl protein: ENSP00000433342
  ensembl transcript: ENST00000525498
  gene symbol: OSBPL5
  hgvsc: ENST00000525498.1:c.1949C>G
  hgvsp: ENSP00000433342.1:p.Ala650Gly
  variant of: http://identifiers.org/hgnc/16392
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28728
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7924
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala739Gly
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: G

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8371
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1017
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2074
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8326
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526344709689236e-5
allele num: 65516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.75e-1

DP
type: SiteQuality
SIO_000300: 1.868568e6

QD
type: SiteQuality
SIO_000300: 1.19e1

MQRankSum
type: SiteQuality
SIO_000300: -2.19e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.652e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.98e-1

GenotypeQuality
all individuals: 32146
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8378
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65524
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.85e0

FS
type: SiteQuality
SIO_000300: 5.929e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 2.432e1

DP
type: SiteQuality
SIO_000300: 1.869095e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.13e0

GenotypeQuality
all individuals: 32112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8327
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3014
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2552
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

African
type: Population
allele count: 43
allele frequency: 4.193485469085235e-3
allele num: 10254
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.052689419378472e-5
allele num: 65516
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 5.43e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 1.869177e6

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

QD
type: SiteQuality
SIO_000300: 1.345e1

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32247
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8342
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 741
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2091
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52592547379986e-5
allele num: 65534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.337e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

FS
type: SiteQuality
SIO_000300: 1.631e0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.262e0

DP
type: SiteQuality
SIO_000300: 1.867109e6

GenotypeQuality
all individuals: 2559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1022
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3007
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32247
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.52592547379986e-5
allele num: 65534
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.867109e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.815469179426777e-5
allele num: 10188
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65418
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: -3.552e0

ReadPosRankSum
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FS
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MQ
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VQSLOD
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ClippingRankSum
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SIO_000300: -4.24e-1

DP
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QD
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MQRankSum
type: SiteQuality
SIO_000300: 2.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.856100926473487e-5
allele num: 10146
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.099048548426445e-5
allele num: 16396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65264
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

VQSLOD
type: SiteQuality
SIO_000300: 6.51e-1

BaseQRankSum
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SIO_000300: -4.6e-1

DP
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SIO_000300: 1.846388e6

FS
type: SiteQuality
SIO_000300: 5.082e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.503e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.37e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532191340054546e-5
allele num: 65266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.091190108191654e-4
allele num: 6470
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.733624454148471e-5
allele num: 11450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

QD
type: SiteQuality
SIO_000300: 1.275e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

FS
type: SiteQuality
SIO_000300: 4.625e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.417e0

DP
type: SiteQuality
SIO_000300: 1.846074e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.136363636363636e-3
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 69
allele frequency: 1.057990125425496e-3
allele num: 65218
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.43e-1

DP
type: SiteQuality
SIO_000300: 1.84367e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
SIO_000300: 1.303e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.455e0

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10078
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.07739652254193e-5
allele num: 64990
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e0

DP
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.928e1

ReadPosRankSum
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SIO_000300: 5.91e-1

InbreedingCoeff
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VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 3.26e0

QD
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SIO_000300: 1.361e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.538508877196221e-5
allele num: 64998
num of homozygotes: 0

African
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East Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
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MQ
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VQSLOD
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MQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.615810690217558e-5
allele num: 64994
num of homozygotes: 0

African
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East Asian
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Other
type: Population
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
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FS
type: SiteQuality
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MQRankSum
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MQ
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InbreedingCoeff
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.924573243350536e-5
allele num: 10076
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538603563405853e-5
allele num: 64994
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110228522546743e-5
allele num: 16366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.03e-1

QD
type: SiteQuality
SIO_000300: 1.651e1

FS
type: SiteQuality
SIO_000300: 9.811999999999999e0

DP
type: SiteQuality
SIO_000300: 1.827448e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 5.892e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

GenotypeQuality
all individuals: 2362
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8289
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 998
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.077680659854734e-5
allele num: 64984
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.03e-1

QD
type: SiteQuality
SIO_000300: 1.665e1

MQRankSum
type: SiteQuality
SIO_000300: -9.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 2.787e0

VQSLOD
type: SiteQuality
SIO_000300: 4.18e-1

DP
type: SiteQuality
SIO_000300: 1.826643e6

GenotypeQuality
all individuals: 484
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1456
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2746
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 29144
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variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1977
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GenotypeQuality
all individuals: 8277
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variant carriers: 2

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 5.25e1
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GenotypeQuality
all individuals: 315
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2229
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.091763541924314e-5
allele num: 64688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.74e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.153e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.78e-1

QD
type: SiteQuality
SIO_000300: 1.883e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

FS
type: SiteQuality
SIO_000300: 5.344e0

DP
type: SiteQuality
SIO_000300: 1.805342e6

GenotypeQuality
all individuals: 1450
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7323
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variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2730
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29371
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2240
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.137228427642077e-5
allele num: 16294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.823010411152286e-5
allele num: 11334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.730842971117571e-5
allele num: 64676
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 1.804136e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.16e-1

FS
type: SiteQuality
SIO_000300: 1.802e0

VQSLOD
type: SiteQuality
SIO_000300: 6.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

QD
type: SiteQuality
SIO_000300: 1.14e1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.909e0

GenotypeQuality
all individuals: 7275
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2276
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29124
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2733
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8272
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.002204850671477e-4
allele num: 9978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64598
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.804e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.509e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e0

QD
type: SiteQuality
SIO_000300: 2.524e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.798504e6

GenotypeQuality
all individuals: 354
bin: 4.75e1
variant carriers: 73

GenotypeQuality
all individuals: 96
bin: 1.75e1
variant carriers: 26

GenotypeQuality
all individuals: 2369
bin: 2.25e1
variant carriers: 27

GenotypeQuality
all individuals: 20272
bin: 9.75e1
variant carriers: 19885

GenotypeQuality
all individuals: 1234
bin: 7.75e1
variant carriers: 111

GenotypeQuality
all individuals: 380
bin: 5.25e1
variant carriers: 81

GenotypeQuality
all individuals: 93
bin: 1.25e1
variant carriers: 35

GenotypeQuality
all individuals: 276
bin: 9.25e1
variant carriers: 131

GenotypeQuality
all individuals: 320
bin: 5.75e1
variant carriers: 80

GenotypeQuality
all individuals: 220
bin: 4.25e1
variant carriers: 45

GenotypeQuality
all individuals: 190
bin: 2.5e0
variant carriers: 10

GenotypeQuality
all individuals: 1289
bin: 7.25e1
variant carriers: 75

GenotypeQuality
all individuals: 25583
bin: 6.25e1
variant carriers: 95

GenotypeQuality
all individuals: 608
bin: 8.25e1
variant carriers: 162

GenotypeQuality
all individuals: 246
bin: 8.75e1
variant carriers: 114

GenotypeQuality
all individuals: 5556
bin: 6.75e1
variant carriers: 103

Other
type: Population
allele count: 196
allele frequency: 2.268518518518519e-1
allele num: 864
num of homozygotes: 33

East Asian
type: Population
allele count: 274
allele frequency: 3.225047080979284e-2
allele num: 8496
num of homozygotes: 4

African
type: Population
allele count: 1603
allele frequency: 1.613975030205397e-1
allele num: 9932
num of homozygotes: 119

Latino
type: Population
allele count: 968
allele frequency: 8.598330076390123e-2
allele num: 11258
num of homozygotes: 49

European (Non-Finnish)
type: Population
allele count: 13727
allele frequency: 2.135567379196615e-1
allele num: 64278
num of homozygotes: 1440

European (Finnish)
type: Population
allele count: 2257
allele frequency: 3.590518612790328e-1
allele num: 6286
num of homozygotes: 357

South Asian
type: Population
allele count: 4641
allele frequency: 2.853190704537071e-1
allele num: 16266
num of homozygotes: 703

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.98e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.959e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.69e-1

DP
type: SiteQuality
SIO_000300: 1.924268e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.595e1

MQRankSum
type: SiteQuality
SIO_000300: 7.3e-2

FS
type: SiteQuality
SIO_000300: 1.286e0

VQSLOD
type: SiteQuality
SIO_000300: 4.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

GenotypeQuality
all individuals: 38942
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1933
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4098
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8554
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570154503203115e-5
allele num: 63688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.07e-1

DP
type: SiteQuality
SIO_000300: 1.537788e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.544e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.213e0

QD
type: SiteQuality
SIO_000300: 1.463e1

VQSLOD
type: SiteQuality
SIO_000300: 3.99e-1

GenotypeQuality
all individuals: 647
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37930
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 5.75e1
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GenotypeQuality
all individuals: 762
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8100
bin: 6.75e1
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GenotypeQuality
all individuals: 203
bin: 8.75e1
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GenotypeQuality
all individuals: 221
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GenotypeQuality
all individuals: 1843
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.022013713460844e-5
allele num: 11084
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16024
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.4e-1

QD
type: SiteQuality
SIO_000300: 1.608e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.167e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e0

FS
type: SiteQuality
SIO_000300: 2.931e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.5e-2

DP
type: SiteQuality
SIO_000300: 1.519923e6

GenotypeQuality
all individuals: 514
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1536
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5892
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 820
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.048218029350105e-4
allele num: 9540
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.200192030724916e-4
allele num: 8332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.600204826217756e-4
allele num: 62492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10874
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.480588e6

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

MQRankSum
type: SiteQuality
SIO_000300: -2.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

GenotypeQuality
all individuals: 331
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1618
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37127
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5802
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9498
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.304375236414071e-5
allele num: 15862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.603900686469494e-5
allele num: 62348
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.81000481000481e-4
allele num: 8316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.902e0

FS
type: SiteQuality
SIO_000300: 9.27e-1

DP
type: SiteQuality
SIO_000300: 1.474924e6

VQSLOD
type: SiteQuality
SIO_000300: 3.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

QD
type: SiteQuality
SIO_000300: 1.132e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.36e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5320
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9124
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.661295145695584e-5
allele num: 60194
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.236e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.08e-1

DP
type: SiteQuality
SIO_000300: 1.388131e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.057e0

VQSLOD
type: SiteQuality
SIO_000300: -2.32e0

QD
type: SiteQuality
SIO_000300: 3.86e0

GenotypeQuality
all individuals: 457
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8980
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.25e-4
allele num: 8000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59604
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.371e0

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

QD
type: SiteQuality
SIO_000300: 8.59e0

DP
type: SiteQuality
SIO_000300: 1.369284e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.235e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.87e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.049e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.92e-1

GenotypeQuality
all individuals: 1167
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1083
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8000
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.355479498020267e-5
allele num: 59604
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.235e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.92e-1

FS
type: SiteQuality
SIO_000300: 1.371e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.87e-1

DP
type: SiteQuality
SIO_000300: 1.369284e6

VQSLOD
type: SiteQuality
SIO_000300: -1.049e-1

QD
type: SiteQuality
SIO_000300: 8.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 1.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 452
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8974
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.676221127091086e-5
allele num: 59658
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15444
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.276e0

DP
type: SiteQuality
SIO_000300: 1.367484e6

QD
type: SiteQuality
SIO_000300: 6.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.101e0

FS
type: SiteQuality
SIO_000300: 2.995e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 443
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variant carriers: 0

GenotypeQuality
all individuals: 1598
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.685772083614295e-5
allele num: 59320
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

DP
type: SiteQuality
SIO_000300: 1.356797e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.064e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.848e0

QD
type: SiteQuality
SIO_000300: 5.84e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.22538842053926e-5
allele num: 57412
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15242
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.8e-2

DP
type: SiteQuality
SIO_000300: 1.321876e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

FS
type: SiteQuality
SIO_000300: 1.983e0

VQSLOD
type: SiteQuality
SIO_000300: 6.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.16e-1

QD
type: SiteQuality
SIO_000300: 1.243e1

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1829
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15244
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European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.213583121893573e-5
allele num: 57542
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.394e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.023e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.319574e6

FS
type: SiteQuality
SIO_000300: 1.1257e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

QD
type: SiteQuality
SIO_000300: 1.536e1

MQRankSum
type: SiteQuality
SIO_000300: -1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 952
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.739675028704638e-5
allele num: 57482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4912
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.558e0

DP
type: SiteQuality
SIO_000300: 1.304763e6

QD
type: SiteQuality
SIO_000300: 1.412e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.806e0

VQSLOD
type: SiteQuality
SIO_000300: 4.95e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.612007405448295e-5
allele num: 15124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4848
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57204
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.918e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

DP
type: SiteQuality
SIO_000300: 1.297182e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

MQRankSum
type: SiteQuality
SIO_000300: -2.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.196458482890644e-4
allele num: 8358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.774370985485645e-5
allele num: 56358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15060
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.08641975308642e-4
allele num: 9720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 9.765000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.482e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

DP
type: SiteQuality
SIO_000300: 1.286682e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.409999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.396e0

MQ
type: SiteQuality
SIO_000300: 5.88e1

QD
type: SiteQuality
SIO_000300: 4.81e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 872
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4940
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.751313485113835e-5
allele num: 57100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.776e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

FS
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

DP
type: SiteQuality
SIO_000300: 1.270146e6

QD
type: SiteQuality
SIO_000300: 1.109e1

MQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14766
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4848
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.310615989515072e-4
allele num: 7630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56404
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.07e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.7e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

DP
type: SiteQuality
SIO_000300: 1.246662e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 5
allele frequency: 5.828864537188156e-4
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7550
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 55720
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4754
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.478e0

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

DP
type: SiteQuality
SIO_000300: 1.213241e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

QD
type: SiteQuality
SIO_000300: 1.361e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.892505677517033e-5
allele num: 52840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8242
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13986
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.536e0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.885e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.803e0

DP
type: SiteQuality
SIO_000300: 1.104545e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.202e0

QD
type: SiteQuality
SIO_000300: 1.18e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 334
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variant carriers: 0

GenotypeQuality
all individuals: 2926
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8084
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.449275362318841e-4
allele num: 6900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51014
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.564e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.113e0

ClippingRankSum
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SIO_000300: -1.268e0

DP
type: SiteQuality
SIO_000300: 1.0351e6

GenotypeQuality
all individuals: 27521
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2590
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1836
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2624
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17712
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3255
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1022
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13294
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.539360081259522e-4
allele num: 7876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7876
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

DP
type: SiteQuality
SIO_000300: 9.89309e5

VQSLOD
type: SiteQuality
SIO_000300: 5.38e-1

FS
type: SiteQuality
SIO_000300: 1.681e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-1

QD
type: SiteQuality
SIO_000300: 1.113e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.598e0

GenotypeQuality
all individuals: 302
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17712
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1836
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2624
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27521
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2590
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 2
allele frequency: 2.539360081259522e-4
allele num: 7876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4052
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49900
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.479289940828402e-4
allele num: 6760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13294
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.37e-1

QD
type: SiteQuality
SIO_000300: 1.113e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.598e0

FS
type: SiteQuality
SIO_000300: 1.681e0

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-1

DP
type: SiteQuality
SIO_000300: 9.89309e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

GenotypeQuality
all individuals: 461
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1234
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13296
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3274
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2449
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3935
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.0771883178929e-5
allele num: 48142
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.21e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 9.15163e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.353e0

QD
type: SiteQuality
SIO_000300: 9.85e0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-1

GenotypeQuality
all individuals: 518
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4386
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3866
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3231
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1317
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 774
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1302
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31200
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9169
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.156194747509595e-5
allele num: 46378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3646
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.332e0

MQRankSum
type: SiteQuality
SIO_000300: 7.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.409e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.999999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.063e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.03e-1

DP
type: SiteQuality
SIO_000300: 8.50715e5

GenotypeQuality
all individuals: 288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3442
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3826
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4430
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.165931732810714e-5
allele num: 12246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 8.36312e5

VQSLOD
type: SiteQuality
SIO_000300: -2.589e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

FS
type: SiteQuality
SIO_000300: 5.219e0

MQ
type: SiteQuality
SIO_000300: 5.875e1

QD
type: SiteQuality
SIO_000300: 5.34e0

GenotypeQuality
all individuals: 1026
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32632
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4895
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1653
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 136
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5962
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6980
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11754
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.25896810337038e-5
allele num: 44268
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.879e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.541e0

DP
type: SiteQuality
SIO_000300: 7.82458e5

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.69e1

GenotypeQuality
all individuals: 2974
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5257
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7878
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2311
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28000
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.665571235260003e-5
allele num: 10346
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2694
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.33e-1

QD
type: SiteQuality
SIO_000300: 4.2e0

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.79e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 6.73844e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 6.213e1

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27285
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
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GenotypeQuality
all individuals: 149
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2736
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5225
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.966115208291808e-5
allele num: 10034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4966
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5092
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.60139e5

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.87e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

QD
type: SiteQuality
SIO_000300: 9.81e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.98e-1

GenotypeQuality
all individuals: 123
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 9134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5179
bin: 2.75e1
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GenotypeQuality
all individuals: 1315
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 97
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variant carriers: 0

GenotypeQuality
all individuals: 5290
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 23820
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
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GenotypeQuality
all individuals: 317
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2594
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 707
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2316
num of homozygotes: 0

African
type: Population
allele count: 41
allele frequency: 7.744616547034379e-3
allele num: 5294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34074
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 6.590509666080844e-4
allele num: 4552
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.255299954894001e-4
allele num: 4434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 2.24e-1

FS
type: SiteQuality
SIO_000300: 2.709e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.06e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.184e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 6.33993e5

VQSLOD
type: SiteQuality
SIO_000300: 2.61e0

GenotypeQuality
all individuals: 180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22768
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 719
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5129
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5001
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5260
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2581
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4180
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.53514739229025e-4
allele num: 4410
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

FS
type: SiteQuality
SIO_000300: 2.218e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.21e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.25e-1

DP
type: SiteQuality
SIO_000300: 6.26239e5

GenotypeQuality
all individuals: 522
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4787
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4410
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 191
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1272
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.803968731208659e-4
allele num: 33260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5146
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2254
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.849e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.94e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 9.35e0

DP
type: SiteQuality
SIO_000300: 6.24672e5

GenotypeQuality
all individuals: 1272
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4410
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23536
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9343
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5285
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5146
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4456
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.211900022119e-4
allele num: 9042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2254
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.849e0

VQSLOD
type: SiteQuality
SIO_000300: 8.96e-1

DP
type: SiteQuality
SIO_000300: 6.24672e5

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 9.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.94e-2

GenotypeQuality
all individuals: 179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11672
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2593
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14848
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6115
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3676
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7826
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.139e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.53e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.221e0

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 6.02943e5

GenotypeQuality
all individuals: 604
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2506
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3524
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28810
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3721
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4252
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.704164413196323e-4
allele num: 3698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1332
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3310
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.85e-2

MQ
type: SiteQuality
SIO_000300: 5.991e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.91e-1

DP
type: SiteQuality
SIO_000300: 6.01034e5

QD
type: SiteQuality
SIO_000300: 1.127e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
all individuals: 1907
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2823
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 175
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1045
bin: 4.75e1
variant carriers: 4

GenotypeQuality
all individuals: 918
bin: 9.75e1
variant carriers: 114

GenotypeQuality
all individuals: 4415
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 428
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2451
bin: 6.25e1
variant carriers: 10

GenotypeQuality
all individuals: 149
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 116
bin: 8.25e1
variant carriers: 9

GenotypeQuality
all individuals: 730
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 3.03951367781155e-3
allele num: 1316
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 8.183306055646482e-4
allele num: 3666
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 9.420631182289214e-4
allele num: 4246
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.048780487804878e-4
allele num: 3280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 113
allele frequency: 4.569348968863728e-3
allele num: 24730
num of homozygotes: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5310
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.52e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

DP
type: SiteQuality
SIO_000300: 6.00959e5

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 5.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.127e1

VQSLOD
type: SiteQuality
SIO_000300: 3.13e0

GenotypeQuality
all individuals: 658
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7961
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31999
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2527
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3432
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3358
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3325
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 9.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24014
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.429543245869776e-4
allele num: 4116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.924e0

DP
type: SiteQuality
SIO_000300: 6.07207e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.271e0

QD
type: SiteQuality
SIO_000300: 3.42e0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

GenotypeQuality
all individuals: 2625
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 335
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2995
bin: 3.25e1
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GenotypeQuality
all individuals: 809
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1243
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32383
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3080
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.492522432701894e-4
allele num: 4012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5984
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.747e1

FS
type: SiteQuality
SIO_000300: 1.792e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.93e-2

QD
type: SiteQuality
SIO_000300: 1.244e1

DP
type: SiteQuality
SIO_000300: 6.03392e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.445e0

VQSLOD
type: SiteQuality
SIO_000300: -2.437e0

GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 102
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1903
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3675
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 597
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 338
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2939
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3154
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1194
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 5.25e1
variant carriers: 3

South Asian
type: Population
allele count: 32
allele frequency: 5.310321938267508e-3
allele num: 6026
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3074
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 5.94883997620464e-4
allele num: 3362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 8.676789587852494e-4
allele num: 23050
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.9800796812749e-4
allele num: 4016
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.288e1

DP
type: SiteQuality
SIO_000300: 6.05096e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.58e-2

FS
type: SiteQuality
SIO_000300: 5.580000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3008
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 2.226973098164974e-4
allele num: 22452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3996
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1108
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.01e-2

FS
type: SiteQuality
SIO_000300: 5.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.015e1

VQSLOD
type: SiteQuality
SIO_000300: 3.54e-1

DP
type: SiteQuality
SIO_000300: 6.04219e5

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6694
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.33555703802535e-4
allele num: 2998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1046
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2884
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.142e1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

FS
type: SiteQuality
SIO_000300: 6.316e0

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.04e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 5.99801e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.56278831368529e-4
allele num: 3902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 9.175153683824204e-5
allele num: 21798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6694
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 5.99801e5

FS
type: SiteQuality
SIO_000300: 6.316e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.04e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.142e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 227
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 4.105090311986864e-4
allele num: 21924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3914
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.355704697986577e-3
allele num: 298
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.458576429404901e-4
allele num: 6856
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e-1

FS
type: SiteQuality
SIO_000300: 1.106e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

QD
type: SiteQuality
SIO_000300: 1.261e1

VQSLOD
type: SiteQuality
SIO_000300: 3.55e0

DP
type: SiteQuality
SIO_000300: 6.02205e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.24e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 484
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1062
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.34448160535117e-4
allele num: 2990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2896
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.01204e5

QD
type: SiteQuality
SIO_000300: 1.465e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.24e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.54e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

FS
type: SiteQuality
SIO_000300: 2.522e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.763265694960465e-5
allele num: 20994
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2774
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 998
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.31e-1

DP
type: SiteQuality
SIO_000300: 5.9494e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.49e-1

FS
type: SiteQuality
SIO_000300: 1.871e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.34e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.327e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 970
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.940711462450593e-5
allele num: 20240
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.737476047084588e-4
allele num: 7306
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.58e0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.48e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 5.94049e5

QD
type: SiteQuality
SIO_000300: 1.321e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 932
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.688172043010753e-4
allele num: 3720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19408
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2488
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.119e0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.528e1

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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DP
type: SiteQuality
SIO_000300: 5.98773e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 126
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GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.698327037236913e-4
allele num: 3706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.851e-1

QD
type: SiteQuality
SIO_000300: 7.79e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

FS
type: SiteQuality
SIO_000300: 8.318e0

DP
type: SiteQuality
SIO_000300: 5.98284e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.66e-2

GenotypeQuality
all individuals: 3595
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18686
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2334
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.638e0

DP
type: SiteQuality
SIO_000300: 5.93865e5

VQSLOD
type: SiteQuality
SIO_000300: -1.557e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.74e-2

GenotypeQuality
all individuals: 135
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13246
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24357
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4587
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3838
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 168
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18334
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2158
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.64963503649635e-3
allele num: 274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.277e0

VQSLOD
type: SiteQuality
SIO_000300: 3.72e-1

DP
type: SiteQuality
SIO_000300: 5.91579e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.83e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

QD
type: SiteQuality
SIO_000300: 1.012e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 2061
bin: 2.75e1
variant carriers: 7

GenotypeQuality
all individuals: 174
bin: 7.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1074
bin: 9.75e1
variant carriers: 274

GenotypeQuality
all individuals: 981
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 146
bin: 4.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1548
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 24672
bin: 2.25e1
variant carriers: 10

GenotypeQuality
all individuals: 533
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3774
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4114
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 163
bin: 7.25e1
variant carriers: 6

GenotypeQuality
all individuals: 141
bin: 8.25e1
variant carriers: 17

Other
type: Population
allele count: 2
allele frequency: 7.2992700729927e-3
allele num: 274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 193
allele frequency: 1.043356038490648e-2
allele num: 18498
num of homozygotes: 2

Latino
type: Population
allele count: 21
allele frequency: 9.562841530054645e-3
allele num: 2196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2276
num of homozygotes: 0

South Asian
type: Population
allele count: 24
allele frequency: 2.874251497005988e-3
allele num: 8350
num of homozygotes: 1

African
type: Population
allele count: 7
allele frequency: 1.917808219178082e-3
allele num: 3650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.421800947867299e-2
allele num: 844
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
type: SiteQuality
SIO_000300: 5.93505e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.399999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.75e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.32e0

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13418
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5661
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 159
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22189
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
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variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 662
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
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variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 5927
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1950
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.88650812338121e-5
allele num: 16988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3548
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 5.792e0

QD
type: SiteQuality
SIO_000300: 1.081e1

DP
type: SiteQuality
SIO_000300: 5.85924e5

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
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variant carriers: 0

GenotypeQuality
all individuals: 13461
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23633
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variant carriers: 1

GenotypeQuality
all individuals: 125
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variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.75e1
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GenotypeQuality
all individuals: 821
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 4645
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1935
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 5.081300813008131e-4
allele num: 1968
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 2.780867630700779e-3
allele num: 3596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.158480074142725e-4
allele num: 17264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2094
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.194743130227001e-4
allele num: 8370
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.86916e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.87e-2

QD
type: SiteQuality
SIO_000300: 1.372e1

FS
type: SiteQuality
SIO_000300: 1.129e0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.58e-1

GenotypeQuality
all individuals: 6164
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4168
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23790
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4564
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13459
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1435
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1932
num of homozygotes: 0